Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
KEGG 03040 | View Gene Set | 2.252e-11 | 128 | 4.82e-09 | 1 | Spliceosome | www.genome.jp/d... |
KEGG 03018 | View Gene Set | 7.784e-06 | 59 | 0.0008329 | 2 | RNA degradation | www.genome.jp/d... |
KEGG 04110 | View Gene Set | 2.745e-05 | 128 | 0.001958 | 3 | Cell cycle | www.genome.jp/d... |
KEGG 03410 | View Gene Set | 0.0001001 | 34 | 0.005353 | 4 | Base excision repair | www.genome.jp/d... |
KEGG 03030 | View Gene Set | 0.001159 | 36 | 0.04963 | 5 | DNA replication | www.genome.jp/d... |
Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
GO GO:0090304 | View Gene Set | 1.693e-59 | 3724 | 2.261e-55 | 1 | nucleic acid metabolic process | amigo.geneontol... |
GO GO:0005634 | View Gene Set | 1.332e-55 | 5198 | 8.899e-52 | 2 | nucleus | amigo.geneontol... |
GO GO:0003676 | View Gene Set | 1.65e-50 | 2979 | 7.349e-47 | 3 | nucleic acid binding | amigo.geneontol... |
GO GO:0010467 | View Gene Set | 2.394e-50 | 3806 | 7.997e-47 | 4 | gene expression | amigo.geneontol... |
GO GO:0006139 | View Gene Set | 4.693e-43 | 4294 | 1.254e-39 | 5 | nucleobase nucleoside nucleotide and nucleic acid metabolic process | amigo.geneontol... |
GO GO:0016070 | View Gene Set | 3.017e-42 | 2596 | 6.719e-39 | 6 | RNA metabolic process | amigo.geneontol... |
GO GO:0044428 | View Gene Set | 1.582e-41 | 1938 | 3.019e-38 | 7 | nuclear part | amigo.geneontol... |
GO GO:0044260 | View Gene Set | 7.711e-39 | 5699 | 1.288e-35 | 8 | cellular macromolecule metabolic process | amigo.geneontol... |
GO GO:0031981 | View Gene Set | 6.967e-35 | 1518 | 1.034e-31 | 9 | nuclear lumen | amigo.geneontol... |
GO GO:0034645 | View Gene Set | 1.068e-34 | 3529 | 1.426e-31 | 10 | cellular macromolecule biosynthetic process | amigo.geneontol... |
GO GO:0009059 | View Gene Set | 1.545e-34 | 3597 | 1.854e-31 | 11 | macromolecule biosynthetic process | amigo.geneontol... |
GO GO:0034641 | View Gene Set | 1.665e-34 | 4584 | 1.854e-31 | 11 | cellular nitrogen compound metabolic process | amigo.geneontol... |
GO GO:0003723 | View Gene Set | 4.623e-31 | 732 | 4.751e-28 | 13 | RNA binding | amigo.geneontol... |
GO GO:0006350 | View Gene Set | 1.28e-30 | 2744 | 1.221e-27 | 14 | transcription | amigo.geneontol... |
GO GO:0043170 | View Gene Set | 6.749e-30 | 6274 | 6.011e-27 | 15 | macromolecule metabolic process | amigo.geneontol... |
GO GO:0006807 | View Gene Set | 1.504e-29 | 4698 | 1.256e-26 | 16 | nitrogen compound metabolic process | amigo.geneontol... |
GO GO:0010468 | View Gene Set | 2.242e-29 | 2958 | 1.762e-26 | 17 | regulation of gene expression | amigo.geneontol... |
GO GO:0010556 | View Gene Set | 1.13e-28 | 2901 | 8.386e-26 | 18 | regulation of macromolecule biosynthetic process | amigo.geneontol... |
GO GO:0006396 | View Gene Set | 3.116e-28 | 578 | 2.191e-25 | 19 | RNA processing | amigo.geneontol... |
GO GO:0045449 | View Gene Set | 3.733e-28 | 2647 | 2.494e-25 | 20 | regulation of transcription | amigo.geneontol... |
GO GO:0070013 | View Gene Set | 8.004e-28 | 1845 | 5.092e-25 | 21 | intracellular organelle lumen | amigo.geneontol... |
GO GO:0060255 | View Gene Set | 4.367e-27 | 3411 | 2.652e-24 | 22 | regulation of macromolecule metabolic process | amigo.geneontol... |
GO GO:0043233 | View Gene Set | 1.09e-26 | 1881 | 6.332e-24 | 23 | organelle lumen | amigo.geneontol... |
GO GO:0005654 | View Gene Set | 1.372e-26 | 939 | 7.639e-24 | 24 | nucleoplasm | amigo.geneontol... |
GO GO:0031974 | View Gene Set | 2.062e-25 | 1917 | 1.102e-22 | 25 | membrane-enclosed lumen | amigo.geneontol... |
GO GO:0016071 | View Gene Set | 2.268e-23 | 381 | 1.165e-20 | 26 | mRNA metabolic process | amigo.geneontol... |
GO GO:0031326 | View Gene Set | 2.39e-23 | 3048 | 1.183e-20 | 27 | regulation of cellular biosynthetic process | amigo.geneontol... |
GO GO:0003677 | View Gene Set | 3.054e-23 | 2028 | 1.457e-20 | 28 | DNA binding | amigo.geneontol... |
GO GO:0009889 | View Gene Set | 4.93e-23 | 3070 | 2.271e-20 | 29 | regulation of biosynthetic process | amigo.geneontol... |
GO GO:0008380 | View Gene Set | 8.024e-23 | 300 | 3.573e-20 | 30 | RNA splicing | amigo.geneontol... |
GO GO:0006397 | View Gene Set | 7.505e-22 | 317 | 3.234e-19 | 31 | mRNA processing | amigo.geneontol... |
GO GO:0019219 | View Gene Set | 7.992e-22 | 3040 | 3.337e-19 | 32 | regulation of nucleobase nucleoside nucleotide and nucleic acid metabolic process | amigo.geneontol... |
GO GO:0080090 | View Gene Set | 2.462e-21 | 3585 | 9.968e-19 | 33 | regulation of primary metabolic process | amigo.geneontol... |
GO GO:0051171 | View Gene Set | 4.832e-21 | 3066 | 1.899e-18 | 34 | regulation of nitrogen compound metabolic process | amigo.geneontol... |
GO GO:0030529 | View Gene Set | 2.824e-20 | 504 | 1.078e-17 | 35 | ribonucleoprotein complex | amigo.geneontol... |
GO GO:0044451 | View Gene Set | 6.591e-19 | 600 | 2.446e-16 | 36 | nucleoplasm part | amigo.geneontol... |
GO GO:0005730 | View Gene Set | 7.333e-19 | 734 | 2.648e-16 | 37 | nucleolus | amigo.geneontol... |
GO GO:0044249 | View Gene Set | 5.672e-18 | 4326 | 1.994e-15 | 38 | cellular biosynthetic process | amigo.geneontol... |
GO GO:0005694 | View Gene Set | 7.578e-18 | 507 | 2.596e-15 | 39 | chromosome | amigo.geneontol... |
GO GO:0006351 | View Gene Set | 1.184e-17 | 1949 | 3.955e-15 | 40 | transcription DNA-dependent | amigo.geneontol... |
GO GO:0032774 | View Gene Set | 1.26e-17 | 1953 | 4.107e-15 | 41 | RNA biosynthetic process | amigo.geneontol... |
GO GO:0043227 | View Gene Set | 3.23e-17 | 8383 | 1.027e-14 | 42 | membrane-bounded organelle | amigo.geneontol... |
GO GO:0043231 | View Gene Set | 3.601e-17 | 8376 | 1.119e-14 | 43 | intracellular membrane-bounded organelle | amigo.geneontol... |
GO GO:0051252 | View Gene Set | 1.382e-16 | 1869 | 4.195e-14 | 44 | regulation of RNA metabolic process | amigo.geneontol... |
GO GO:0031323 | View Gene Set | 2.356e-16 | 3768 | 6.994e-14 | 45 | regulation of cellular metabolic process | amigo.geneontol... |
GO GO:0006355 | View Gene Set | 1.359e-15 | 1820 | 3.886e-13 | 46 | regulation of transcription DNA-dependent | amigo.geneontol... |
GO GO:0009058 | View Gene Set | 1.367e-15 | 4436 | 3.886e-13 | 46 | biosynthetic process | amigo.geneontol... |
GO GO:0051276 | View Gene Set | 2.753e-15 | 548 | 7.661e-13 | 48 | chromosome organization | amigo.geneontol... |
GO GO:0000775 | View Gene Set | 1.223e-14 | 146 | 3.335e-12 | 49 | chromosome centromeric region | amigo.geneontol... |
GO GO:0019222 | View Gene Set | 7.331e-14 | 4060 | 1.959e-11 | 50 | regulation of metabolic process | amigo.geneontol... |
GO GO:0043229 | View Gene Set | 2.186e-13 | 9346 | 5.726e-11 | 51 | intracellular organelle | amigo.geneontol... |
GO GO:0043226 | View Gene Set | 2.816e-13 | 9360 | 7.234e-11 | 52 | organelle | amigo.geneontol... |
GO GO:0000375 | View Gene Set | 3.303e-13 | 106 | 8.327e-11 | 53 | RNA splicing via transesterification reactions | amigo.geneontol... |
GO GO:0044427 | View Gene Set | 4.233e-13 | 420 | 1.047e-10 | 54 | chromosomal part | amigo.geneontol... |
GO GO:0005681 | View Gene Set | 6.032e-13 | 135 | 1.465e-10 | 55 | spliceosomal complex | amigo.geneontol... |
GO GO:0016568 | View Gene Set | 1.973e-12 | 324 | 4.708e-10 | 56 | chromatin modification | amigo.geneontol... |
GO GO:0043228 | View Gene Set | 5.157e-12 | 2690 | 1.188e-09 | 57 | non-membrane-bounded organelle | amigo.geneontol... |
GO GO:0043232 | View Gene Set | 5.157e-12 | 2690 | 1.188e-09 | 57 | intracellular non-membrane-bounded organelle | amigo.geneontol... |
GO GO:0000279 | View Gene Set | 6.886e-12 | 406 | 1.559e-09 | 59 | M phase | amigo.geneontol... |
GO GO:0030528 | View Gene Set | 1.437e-11 | 950 | 3.2e-09 | 60 | transcription regulator activity | amigo.geneontol... |
GO GO:0022403 | View Gene Set | 2.714e-11 | 522 | 5.945e-09 | 61 | cell cycle phase | amigo.geneontol... |
GO GO:0010629 | View Gene Set | 3.406e-11 | 573 | 7.338e-09 | 62 | negative regulation of gene expression | amigo.geneontol... |
GO GO:0010605 | View Gene Set | 3.672e-11 | 827 | 7.786e-09 | 63 | negative regulation of macromolecule metabolic process | amigo.geneontol... |
GO GO:0000793 | View Gene Set | 3.748e-11 | 136 | 7.823e-09 | 64 | condensed chromosome | amigo.geneontol... |
GO GO:0006259 | View Gene Set | 3.915e-11 | 592 | 8.046e-09 | 65 | DNA metabolic process | amigo.geneontol... |
GO GO:0000819 | View Gene Set | 7.061e-11 | 38 | 1.429e-08 | 66 | sister chromatid segregation | amigo.geneontol... |
GO GO:0048285 | View Gene Set | 7.916e-11 | 286 | 1.579e-08 | 67 | organelle fission | amigo.geneontol... |
GO GO:0000280 | View Gene Set | 9.148e-11 | 276 | 1.771e-08 | 68 | nuclear division | amigo.geneontol... |
GO GO:0007067 | View Gene Set | 9.148e-11 | 276 | 1.771e-08 | 68 | mitosis | amigo.geneontol... |
GO GO:0000087 | View Gene Set | 1.102e-10 | 286 | 2.103e-08 | 70 | M phase of mitotic cell cycle | amigo.geneontol... |
GO GO:0000070 | View Gene Set | 1.136e-10 | 37 | 2.138e-08 | 71 | mitotic sister chromatid segregation | amigo.geneontol... |
GO GO:0044237 | View Gene Set | 1.162e-10 | 7431 | 2.157e-08 | 72 | cellular metabolic process | amigo.geneontol... |
GO GO:0000377 | View Gene Set | 1.225e-10 | 97 | 2.211e-08 | 73 | RNA splicing via transesterification reactions with bulged adenosine as nucleophile | amigo.geneontol... |
GO GO:0000398 | View Gene Set | 1.225e-10 | 97 | 2.211e-08 | 73 | nuclear mRNA splicing via spliceosome | amigo.geneontol... |
GO GO:0000278 | View Gene Set | 1.585e-10 | 489 | 2.823e-08 | 75 | mitotic cell cycle | amigo.geneontol... |
GO GO:0006325 | View Gene Set | 1.731e-10 | 425 | 3.042e-08 | 76 | chromatin organization | amigo.geneontol... |
GO GO:0032991 | View Gene Set | 2.825e-10 | 3237 | 4.901e-08 | 77 | macromolecular complex | amigo.geneontol... |
GO GO:0016481 | View Gene Set | 9.853e-10 | 512 | 1.688e-07 | 78 | negative regulation of transcription | amigo.geneontol... |
GO GO:0022613 | View Gene Set | 1.129e-09 | 194 | 1.91e-07 | 79 | ribonucleoprotein complex biogenesis | amigo.geneontol... |
GO GO:0016604 | View Gene Set | 1.199e-09 | 198 | 2.002e-07 | 80 | nuclear body | amigo.geneontol... |
GO GO:0044238 | View Gene Set | 1.56e-09 | 7629 | 2.574e-07 | 81 | primary metabolic process | amigo.geneontol... |
GO GO:0007059 | View Gene Set | 1.693e-09 | 94 | 2.758e-07 | 82 | chromosome segregation | amigo.geneontol... |
GO GO:0022402 | View Gene Set | 2.129e-09 | 676 | 3.427e-07 | 83 | cell cycle process | amigo.geneontol... |
GO GO:0009892 | View Gene Set | 3.55e-09 | 889 | 5.646e-07 | 84 | negative regulation of metabolic process | amigo.geneontol... |
GO GO:0010558 | View Gene Set | 3.982e-09 | 611 | 6.259e-07 | 85 | negative regulation of macromolecule biosynthetic process | amigo.geneontol... |
GO GO:0008270 | View Gene Set | 4.663e-09 | 2009 | 7.244e-07 | 86 | zinc ion binding | amigo.geneontol... |
GO GO:0045934 | View Gene Set | 7.834e-09 | 574 | 1.203e-06 | 87 | negative regulation of nucleobase nucleoside nucleotide and nucleic acid metabolic process | amigo.geneontol... |
GO GO:0031324 | View Gene Set | 1.277e-08 | 809 | 1.939e-06 | 88 | negative regulation of cellular metabolic process | amigo.geneontol... |
GO GO:0051172 | View Gene Set | 1.423e-08 | 580 | 2.136e-06 | 89 | negative regulation of nitrogen compound metabolic process | amigo.geneontol... |
GO GO:0000776 | View Gene Set | 1.827e-08 | 92 | 2.713e-06 | 90 | kinetochore | amigo.geneontol... |
GO GO:0008168 | View Gene Set | 2.165e-08 | 176 | 3.178e-06 | 91 | methyltransferase activity | amigo.geneontol... |
GO GO:0031327 | View Gene Set | 2.216e-08 | 629 | 3.218e-06 | 92 | negative regulation of cellular biosynthetic process | amigo.geneontol... |
GO GO:0009890 | View Gene Set | 3.498e-08 | 642 | 5.025e-06 | 93 | negative regulation of biosynthetic process | amigo.geneontol... |
GO GO:0022618 | View Gene Set | 4.101e-08 | 76 | 5.828e-06 | 94 | ribonucleoprotein complex assembly | amigo.geneontol... |
GO GO:0000123 | View Gene Set | 4.239e-08 | 50 | 5.962e-06 | 95 | histone acetyltransferase complex | amigo.geneontol... |
GO GO:0016741 | View Gene Set | 4.861e-08 | 179 | 6.764e-06 | 96 | transferase activity transferring one-carbon groups | amigo.geneontol... |
GO GO:0034470 | View Gene Set | 8.735e-08 | 193 | 1.203e-05 | 97 | ncRNA processing | amigo.geneontol... |
GO GO:0051253 | View Gene Set | 1.335e-07 | 420 | 1.819e-05 | 98 | negative regulation of RNA metabolic process | amigo.geneontol... |
GO GO:0000228 | View Gene Set | 1.478e-07 | 177 | 1.995e-05 | 99 | nuclear chromosome | amigo.geneontol... |
GO GO:0030518 | View Gene Set | 2.017e-07 | 73 | 2.695e-05 | 100 | steroid hormone receptor signaling pathway | amigo.geneontol... |
GO GO:0045892 | View Gene Set | 2.242e-07 | 413 | 2.965e-05 | 101 | negative regulation of transcription DNA-dependent | amigo.geneontol... |
GO GO:0003700 | View Gene Set | 2.686e-07 | 964 | 3.518e-05 | 102 | sequence-specific DNA binding transcription factor activity | amigo.geneontol... |
GO GO:0000779 | View Gene Set | 2.843e-07 | 79 | 3.687e-05 | 103 | condensed chromosome centromeric region | amigo.geneontol... |
GO GO:0016563 | View Gene Set | 3.873e-07 | 430 | 4.976e-05 | 104 | transcription activator activity | amigo.geneontol... |
GO GO:0008134 | View Gene Set | 4.224e-07 | 525 | 5.374e-05 | 105 | transcription factor binding | amigo.geneontol... |
GO GO:0007049 | View Gene Set | 4.333e-07 | 1006 | 5.462e-05 | 106 | cell cycle | amigo.geneontol... |
GO GO:0006366 | View Gene Set | 4.703e-07 | 919 | 5.872e-05 | 107 | transcription from RNA polymerase II promoter | amigo.geneontol... |
GO GO:0006974 | View Gene Set | 5.382e-07 | 412 | 6.657e-05 | 108 | response to DNA damage stimulus | amigo.geneontol... |
GO GO:0006260 | View Gene Set | 7.84e-07 | 239 | 9.609e-05 | 109 | DNA replication | amigo.geneontol... |
GO GO:0000245 | View Gene Set | 9.741e-07 | 34 | 0.0001183 | 110 | spliceosome assembly | amigo.geneontol... |
GO GO:0010564 | View Gene Set | 1.076e-06 | 161 | 0.0001295 | 111 | regulation of cell cycle process | amigo.geneontol... |
GO GO:0034660 | View Gene Set | 1.146e-06 | 236 | 0.0001367 | 112 | ncRNA metabolic process | amigo.geneontol... |
GO GO:0030522 | View Gene Set | 1.188e-06 | 95 | 0.0001404 | 113 | intracellular receptor mediated signaling pathway | amigo.geneontol... |
GO GO:0006376 | View Gene Set | 1.506e-06 | 15 | 0.0001764 | 114 | mRNA splice site selection | amigo.geneontol... |
GO GO:0044446 | View Gene Set | 1.581e-06 | 5019 | 0.0001837 | 115 | intracellular organelle part | amigo.geneontol... |
GO GO:0006412 | View Gene Set | 1.935e-06 | 412 | 0.0002229 | 116 | translation | amigo.geneontol... |
GO GO:0000777 | View Gene Set | 1.975e-06 | 74 | 0.0002256 | 117 | condensed chromosome kinetochore | amigo.geneontol... |
GO GO:0006996 | View Gene Set | 2.303e-06 | 1501 | 0.0002607 | 118 | organelle organization | amigo.geneontol... |
GO GO:0051427 | View Gene Set | 2.356e-06 | 90 | 0.0002645 | 119 | hormone receptor binding | amigo.geneontol... |
GO GO:0003712 | View Gene Set | 2.967e-06 | 364 | 0.0003303 | 120 | transcription cofactor activity | amigo.geneontol... |
GO GO:0003682 | View Gene Set | 3.005e-06 | 178 | 0.0003318 | 121 | chromatin binding | amigo.geneontol... |
GO GO:0006357 | View Gene Set | 4.012e-06 | 760 | 0.0004393 | 122 | regulation of transcription from RNA polymerase II promoter | amigo.geneontol... |
GO GO:0035257 | View Gene Set | 4.218e-06 | 79 | 0.0004582 | 123 | nuclear hormone receptor binding | amigo.geneontol... |
GO GO:0006338 | View Gene Set | 4.377e-06 | 59 | 0.0004716 | 124 | chromatin remodeling | amigo.geneontol... |
GO GO:0007051 | View Gene Set | 4.539e-06 | 57 | 0.0004851 | 125 | spindle organization | amigo.geneontol... |
GO GO:0006281 | View Gene Set | 4.749e-06 | 309 | 0.0005035 | 126 | DNA repair | amigo.geneontol... |
GO GO:0043565 | View Gene Set | 6.323e-06 | 638 | 0.0006652 | 127 | sequence-specific DNA binding | amigo.geneontol... |
GO GO:0044422 | View Gene Set | 6.449e-06 | 5089 | 0.0006731 | 128 | organelle part | amigo.geneontol... |
GO GO:0003713 | View Gene Set | 7.491e-06 | 215 | 0.0007758 | 129 | transcription coactivator activity | amigo.geneontol... |
GO GO:0008152 | View Gene Set | 8.218e-06 | 8439 | 0.0008445 | 130 | metabolic process | amigo.geneontol... |
GO GO:0016607 | View Gene Set | 9.134e-06 | 116 | 0.0009315 | 131 | nuclear speck | amigo.geneontol... |
GO GO:0016573 | View Gene Set | 1.055e-05 | 56 | 0.001068 | 132 | histone acetylation | amigo.geneontol... |
GO GO:0006310 | View Gene Set | 1.176e-05 | 130 | 0.001182 | 133 | DNA recombination | amigo.geneontol... |
GO GO:0007052 | View Gene Set | 1.187e-05 | 22 | 0.001183 | 134 | mitotic spindle organization | amigo.geneontol... |
GO GO:0005622 | View Gene Set | 1.431e-05 | 11329 | 0.001414 | 135 | intracellular | amigo.geneontol... |
GO GO:0003702 | View Gene Set | 1.439e-05 | 239 | 0.001414 | 135 | RNA polymerase II transcription factor activity | amigo.geneontol... |
GO GO:0006473 | View Gene Set | 1.552e-05 | 61 | 0.001513 | 137 | protein amino acid acetylation | amigo.geneontol... |
GO GO:0045941 | View Gene Set | 1.632e-05 | 599 | 0.00158 | 138 | positive regulation of transcription | amigo.geneontol... |
GO GO:0005667 | View Gene Set | 1.648e-05 | 201 | 0.001584 | 139 | transcription factor complex | amigo.geneontol... |
GO GO:0044424 | View Gene Set | 1.667e-05 | 10976 | 0.00159 | 140 | intracellular part | amigo.geneontol... |
GO GO:0051301 | View Gene Set | 1.709e-05 | 358 | 0.00162 | 141 | cell division | amigo.geneontol... |
GO GO:0016564 | View Gene Set | 2.162e-05 | 342 | 0.002034 | 142 | transcription repressor activity | amigo.geneontol... |
GO GO:0045893 | View Gene Set | 2.814e-05 | 516 | 0.002626 | 143 | positive regulation of transcription DNA-dependent | amigo.geneontol... |
GO GO:0016585 | View Gene Set | 2.83e-05 | 84 | 0.002626 | 143 | chromatin remodeling complex | amigo.geneontol... |
GO GO:0043543 | View Gene Set | 2.856e-05 | 72 | 0.002632 | 145 | protein amino acid acylation | amigo.geneontol... |
GO GO:0000785 | View Gene Set | 3.188e-05 | 213 | 0.002917 | 146 | chromatin | amigo.geneontol... |
GO GO:0016569 | View Gene Set | 3.212e-05 | 165 | 0.002919 | 147 | covalent chromatin modification | amigo.geneontol... |
GO GO:0005488 | View Gene Set | 3.521e-05 | 12334 | 0.003179 | 148 | binding | amigo.geneontol... |
GO GO:0016570 | View Gene Set | 3.674e-05 | 162 | 0.003282 | 149 | histone modification | amigo.geneontol... |
GO GO:0046914 | View Gene Set | 3.685e-05 | 2285 | 0.003282 | 149 | transition metal ion binding | amigo.geneontol... |
GO GO:0000122 | View Gene Set | 3.729e-05 | 292 | 0.003283 | 151 | negative regulation of transcription from RNA polymerase II promoter | amigo.geneontol... |
GO GO:0043189 | View Gene Set | 3.736e-05 | 15 | 0.003283 | 151 | H4/H2A histone acetyltransferase complex | amigo.geneontol... |
GO GO:0009952 | View Gene Set | 4.152e-05 | 155 | 0.003626 | 153 | anterior/posterior pattern formation | amigo.geneontol... |
GO GO:0032268 | View Gene Set | 4.276e-05 | 576 | 0.003709 | 154 | regulation of cellular protein metabolic process | amigo.geneontol... |
GO GO:0030521 | View Gene Set | 4.39e-05 | 47 | 0.003784 | 155 | androgen receptor signaling pathway | amigo.geneontol... |
GO GO:0051254 | View Gene Set | 4.524e-05 | 522 | 0.003874 | 156 | positive regulation of RNA metabolic process | amigo.geneontol... |
GO GO:0043967 | View Gene Set | 4.564e-05 | 25 | 0.003884 | 157 | histone H4 acetylation | amigo.geneontol... |
GO GO:0008757 | View Gene Set | 4.721e-05 | 91 | 0.003992 | 158 | S-adenosylmethionine-dependent methyltransferase activity | amigo.geneontol... |
GO GO:0070647 | View Gene Set | 4.826e-05 | 356 | 0.004055 | 159 | protein modification by small protein conjugation or removal | amigo.geneontol... |
GO GO:0005876 | View Gene Set | 4.876e-05 | 35 | 0.004071 | 160 | spindle microtubule | amigo.geneontol... |
GO GO:0006399 | View Gene Set | 4.997e-05 | 118 | 0.004147 | 161 | tRNA metabolic process | amigo.geneontol... |
GO GO:0000184 | View Gene Set | 5.263e-05 | 30 | 0.00433 | 162 | nuclear-transcribed mRNA catabolic process nonsense-mediated decay | amigo.geneontol... |
GO GO:0032446 | View Gene Set | 5.315e-05 | 310 | 0.00433 | 162 | protein modification by small protein conjugation | amigo.geneontol... |
GO GO:0045815 | View Gene Set | 5.316e-05 | 10 | 0.00433 | 162 | positive regulation of gene expression epigenetic | amigo.geneontol... |
GO GO:0007346 | View Gene Set | 5.417e-05 | 174 | 0.004364 | 165 | regulation of mitotic cell cycle | amigo.geneontol... |
GO GO:0010557 | View Gene Set | 5.423e-05 | 702 | 0.004364 | 165 | positive regulation of macromolecule biosynthetic process | amigo.geneontol... |
GO GO:0030530 | View Gene Set | 5.603e-05 | 17 | 0.004482 | 167 | heterogeneous nuclear ribonucleoprotein complex | amigo.geneontol... |
GO GO:0032583 | View Gene Set | 5.721e-05 | 223 | 0.00455 | 168 | regulation of gene-specific transcription | amigo.geneontol... |
GO GO:0006401 | View Gene Set | 6.199e-05 | 74 | 0.004901 | 169 | RNA catabolic process | amigo.geneontol... |
GO GO:0034621 | View Gene Set | 6.247e-05 | 458 | 0.00491 | 170 | cellular macromolecular complex subunit organization | amigo.geneontol... |
GO GO:0042254 | View Gene Set | 7.026e-05 | 130 | 0.005489 | 171 | ribosome biogenesis | amigo.geneontol... |
GO GO:0051246 | View Gene Set | 8.156e-05 | 652 | 0.006335 | 172 | regulation of protein metabolic process | amigo.geneontol... |
GO GO:0008033 | View Gene Set | 9.005e-05 | 78 | 0.006954 | 173 | tRNA processing | amigo.geneontol... |
GO GO:0044454 | View Gene Set | 9.072e-05 | 139 | 0.006966 | 174 | nuclear chromosome part | amigo.geneontol... |
GO GO:0008170 | View Gene Set | 9.26e-05 | 58 | 0.00707 | 175 | N-methyltransferase activity | amigo.geneontol... |
GO GO:0042809 | View Gene Set | 9.96e-05 | 16 | 0.007561 | 176 | vitamin D receptor binding | amigo.geneontol... |
GO GO:0000940 | View Gene Set | 0.0001036 | 12 | 0.007822 | 177 | outer kinetochore of condensed chromosome | amigo.geneontol... |
GO GO:0035267 | View Gene Set | 0.0001124 | 14 | 0.008433 | 178 | NuA4 histone acetyltransferase complex | amigo.geneontol... |
GO GO:0008139 | View Gene Set | 0.0001201 | 9 | 0.008966 | 179 | nuclear localization sequence binding | amigo.geneontol... |
GO GO:0006403 | View Gene Set | 0.0001258 | 104 | 0.009266 | 180 | RNA localization | amigo.geneontol... |
GO GO:0008608 | View Gene Set | 0.0001262 | 8 | 0.009266 | 180 | attachment of spindle microtubules to kinetochore | amigo.geneontol... |
GO GO:0051313 | View Gene Set | 0.0001262 | 8 | 0.009266 | 180 | attachment of spindle microtubules to chromosome | amigo.geneontol... |
GO GO:0045935 | View Gene Set | 0.0001304 | 680 | 0.009523 | 183 | positive regulation of nucleobase nucleoside nucleotide and nucleic acid metabolic process | amigo.geneontol... |
GO GO:0043981 | View Gene Set | 0.0001327 | 6 | 0.00958 | 184 | histone H4-K5 acetylation | amigo.geneontol... |
GO GO:0043982 | View Gene Set | 0.0001327 | 6 | 0.00958 | 184 | histone H4-K8 acetylation | amigo.geneontol... |
GO GO:0003690 | View Gene Set | 0.0001367 | 99 | 0.009822 | 186 | double-stranded DNA binding | amigo.geneontol... |
GO GO:0010628 | View Gene Set | 0.0001484 | 632 | 0.01036 | 187 | positive regulation of gene expression | amigo.geneontol... |
GO GO:0050657 | View Gene Set | 0.0001491 | 102 | 0.01036 | 187 | nucleic acid transport | amigo.geneontol... |
GO GO:0050658 | View Gene Set | 0.0001491 | 102 | 0.01036 | 187 | RNA transport | amigo.geneontol... |
GO GO:0051236 | View Gene Set | 0.0001491 | 102 | 0.01036 | 187 | establishment of RNA localization | amigo.geneontol... |
GO GO:0071564 | View Gene Set | 0.0001479 | 11 | 0.01036 | 187 | npBAF complex | amigo.geneontol... |
GO GO:0016278 | View Gene Set | 0.0001519 | 37 | 0.01036 | 187 | lysine N-methyltransferase activity | amigo.geneontol... |
GO GO:0016279 | View Gene Set | 0.0001519 | 37 | 0.01036 | 187 | protein-lysine N-methyltransferase activity | amigo.geneontol... |
GO GO:0018024 | View Gene Set | 0.0001519 | 37 | 0.01036 | 187 | histone-lysine N-methyltransferase activity | amigo.geneontol... |
GO GO:0043566 | View Gene Set | 0.0001517 | 149 | 0.01036 | 187 | structure-specific DNA binding | amigo.geneontol... |
GO GO:0070742 | View Gene Set | 0.0001505 | 8 | 0.01036 | 187 | C2H2 zinc finger domain binding | amigo.geneontol... |
GO GO:0010608 | View Gene Set | 0.0001728 | 247 | 0.01172 | 197 | posttranscriptional regulation of gene expression | amigo.geneontol... |
GO GO:0030532 | View Gene Set | 0.0002048 | 32 | 0.0137 | 198 | small nuclear ribonucleoprotein complex | amigo.geneontol... |
GO GO:0034708 | View Gene Set | 0.0002051 | 56 | 0.0137 | 198 | methyltransferase complex | amigo.geneontol... |
GO GO:0035097 | View Gene Set | 0.0002051 | 56 | 0.0137 | 198 | histone methyltransferase complex | amigo.geneontol... |
Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
Broad chr20q13 | View Gene Set | 2.826e-05 | 183 | 0.009212 | 1 | Genes in cytogenetic band chr20q13 | www.broad.mit.e... |
Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
Broad PUJANA_BRCA1_PCC_NETWORK | View Gene Set | 2.418e-33 | 1582 | 5.783e-30 | 1 | Genes constituting the BRCA1-PCC network of transcripts whose expression positively correlated (Pearson correlation coefficient PCC >= 0.4) with that of BRCA1 [Gene ID=672] across a compendium of normal tissues. | www.broad.mit.e... |
Broad DODD_NASOPHARYNGEAL_CARCINOMA_DN | View Gene Set | 6.869e-31 | 1253 | 8.216e-28 | 2 | Genes down-regulated in nasopharyngeal carcinoma (NPC) compared to the normal tissue. | www.broad.mit.e... |
Broad PUJANA_CHEK2_PCC_NETWORK | View Gene Set | 4.17e-28 | 744 | 3.325e-25 | 3 | Genes constituting the CHEK2-PCC network of transcripts whose expression positively correlates (Pearson correlation coefficient PCC >= 0.4) with that of CHEK2 [Gene ID=11200]. | www.broad.mit.e... |
Broad PUJANA_BRCA2_PCC_NETWORK | View Gene Set | 3.26e-21 | 410 | 1.95e-18 | 4 | Genes constituting the BRCA2-PCC network of transcripts whose expression positively correlated (Pearson correlation coefficient PCC >= 0.4) with that of BRCA2 [Gene ID=675] across a compendium of normal tissues. | www.broad.mit.e... |
Broad TOYOTA_TARGETS_OF_MIR34B_AND_MIR34C | View Gene Set | 4.868e-19 | 436 | 1.941e-16 | 5 | Genes down-regulated in HCT116 cells (colon cancer) upon expression of MIR34B or MIR34C [Gene ID=407041 407042] microRNAs. | www.broad.mit.e... |
Broad CAIRO_HEPATOBLASTOMA_CLASSES_UP | View Gene Set | 4.076e-19 | 577 | 1.941e-16 | 5 | Genes up-regulated in robust Cluster 2 (rC2) of hepatoblastoma samples compared to those in the robust Cluster 1 (rC1). | www.broad.mit.e... |
Broad ROSTY_CERVICAL_CANCER_PROLIFERATION_CLUSTER | View Gene Set | 1.243e-16 | 138 | 3.749e-14 | 7 | The 'Cervical Cancer Proliferation Cluster' (CCPC): genes whose expression in cervical carcinoma positively correlates with that of the HPV E6 and E7 oncogenes; they are also differentially expressed according to disease outcome. | www.broad.mit.e... |
Broad PUJANA_XPRSS_INT_NETWORK | View Gene Set | 1.254e-16 | 164 | 3.749e-14 | 7 | Genes constituting the XPRSS-Int network: intersection of genes whose expression correlates with BRCA1 BRCA2 ATM and CHEK2 [Gene ID=672 675 472 11200] in a compendium of normal tissues. | www.broad.mit.e... |
Broad KINSEY_TARGETS_OF_EWSR1_FLII_FUSION_UP | View Gene Set | 2.891e-16 | 1180 | 7.685e-14 | 9 | Genes up-regulated in TC71 and EWS502 cells (Ewing's sarcoma) upon knockdown of the EWSR1-FLII fusion [Gene ID=2130 2314]. | www.broad.mit.e... |
Broad PUJANA_ATM_PCC_NETWORK | View Gene Set | 6.308e-16 | 1375 | 1.395e-13 | 10 | Genes constituting the ATM-PCC network of transcripts whose expression positively correlated (Pearson correlation coefficient PCC >= 0.4) with that of ATM [Gene ID=472] across a compendium of normal tissues. | www.broad.mit.e... |
Broad WONG_EMBRYONIC_STEM_CELL_CORE | View Gene Set | 6.415e-16 | 331 | 1.395e-13 | 10 | The 'core ESC-like gene module': genes coordinately up-regulated in a compendium of mouse embryonic stem cells (ESC) which are shared with the human ESC-like module. | www.broad.mit.e... |
Broad MANALO_HYPOXIA_DN | View Gene Set | 1.011e-14 | 276 | 2.015e-12 | 12 | Genes down-regulated in response to both hypoxia and overexpression of an active form of HIF1A [Gene ID=3091]. | www.broad.mit.e... |
Broad SOTIRIOU_BREAST_CANCER_GRADE_1_VS_3_UP | View Gene Set | 1.424e-14 | 143 | 2.59e-12 | 13 | Up-regulated genes whose expression correlated with histologic grade of invasive breast cancer tumors: comparison of grade 1 vs grade 3. | www.broad.mit.e... |
Broad KOBAYASHI_EGFR_SIGNALING_24HR_DN | View Gene Set | 1.516e-14 | 243 | 2.59e-12 | 13 | Genes down-regulated in H1975 cells (non-small cell lung cancer NSCLC) resistant to gefitinib [PubChem=123631] after treatment with EGFR inhibitor CL-387785 [PubChem=2776] for 24h. | www.broad.mit.e... |
Broad MITSIADES_RESPONSE_TO_APLIDIN_DN | View Gene Set | 2.451e-13 | 241 | 3.909e-11 | 15 | Genes down-regulated in the MM1S cells (multiple myeloma) after treatment with aplidin [PubChem=44152164] a marine-derived compound with potential anti-cancer properties. | www.broad.mit.e... |
Broad CROONQUIST_NRAS_SIGNALING_DN | View Gene Set | 2.48e-12 | 62 | 3.49e-10 | 16 | Genes down-regulated in ANBL-6 cell line (multiple myeloma MM) expressing a constantly active form of NRAS [Gene ID=4893] off a plasmid vector compared to those grown in the presence of IL6 [Gene ID=3569]. | www.broad.mit.e... |
Broad FOURNIER_ACINAR_DEVELOPMENT_LATE_2 | View Gene Set | 2.463e-12 | 265 | 3.49e-10 | 16 | Genes identified by method 2 as coordinately down-regulated late in HMEC cells (mammary epithelium) during acinar development in vitro. | www.broad.mit.e... |
Broad MARKEY_RB1_ACUTE_LOF_DN | View Gene Set | 3.554e-12 | 201 | 4.722e-10 | 18 | Genes down-regulated in adult fibroblasts with inactivated RB1 [Gene ID=5925] by Cre-lox: acute loss of function (LOF) of RB1. | www.broad.mit.e... |
Broad BIDUS_METASTASIS_UP | View Gene Set | 5.452e-12 | 203 | 6.863e-10 | 19 | Genes up-regulated in endometroid endometrial tumors from patients with lymph node metastases compared to those without the metastases. | www.broad.mit.e... |
Broad CROONQUIST_IL6_DEPRIVATION_DN | View Gene Set | 1.829e-11 | 80 | 2.188e-09 | 20 | Genes down-regulated in the ANBL-6 cell line (multiple myeloma MM) after withdrawal of IL6 [Gene ID=3569]. | www.broad.mit.e... |
Broad MISSIAGLIA_REGULATED_BY_METHYLATION_DN | View Gene Set | 2.881e-11 | 96 | 3.282e-09 | 21 | Genes down-regulated in PaCa44 and CFPAC1 cells (pancreatic cancer) after treatment with decitabine [PubChem=451668] a DNA hypomethylating agent similar to azacitidine [PubChem=9444]. | www.broad.mit.e... |
Broad BOYAULT_LIVER_CANCER_SUBCLASS_G3_UP | View Gene Set | 3.088e-11 | 184 | 3.358e-09 | 22 | Up-regulated genes in hepatocellular carcinoma (HCC) subclass G3 defined by unsupervised clustering. | www.broad.mit.e... |
Broad GARGALOVIC_RESPONSE_TO_OXIDIZED_PHOSPHOLIPIDS_TURQUOISE_DN | View Gene Set | 5.42e-11 | 51 | 5.637e-09 | 23 | Genes from the turquoise module which are down-regulated in HAEC cells (primary aortic endothelium) after exposure to the oxidized 1-palmitoyl-2-arachidonyl-sn-3-glycerophosphocholine (oxPAPC). | www.broad.mit.e... |
Broad PUJANA_BRCA_CENTERED_NETWORK | View Gene Set | 7.647e-11 | 92 | 7.621e-09 | 24 | Genes constituting the BRCA-centered network (BCN). | www.broad.mit.e... |
Broad GINESTIER_BREAST_CANCER_ZNF217_AMPLIFIED_DN | View Gene Set | 2.825e-10 | 308 | 2.703e-08 | 25 | Genes down-regulated in non-metastatic breast cancer tumors having type 1 amplification in the 20q13 region; involves ZNF217 [Gene ID=7764] locus only. | www.broad.mit.e... |
Broad LI_WILMS_TUMOR_VS_FETAL_KIDNEY_1_DN | View Gene Set | 1.248e-09 | 158 | 1.148e-07 | 26 | Genes down-regulated in Wilm's tumor samples compared to fetal kidney. | www.broad.mit.e... |
Broad BERENJENO_TRANSFORMED_BY_RHOA_UP | View Gene Set | 3.656e-09 | 485 | 3.124e-07 | 27 | Genes up-regulated in NIH3T3 cells (fibroblasts) transformed by expression of contitutively active (Q63L) form of RHOA [Gene ID=387] off plasmid vector. | www.broad.mit.e... |
Broad PUJANA_BREAST_CANCER_WITH_BRCA1_MUTATED_UP | View Gene Set | 3.564e-09 | 53 | 3.124e-07 | 27 | The XPRSS-Int network genes up-regulated in breast tumors from patients with germline mutations in BRCA1 [Gene ID=672] compared to those with the wild type allele. | www.broad.mit.e... |
Broad ODONNELL_TFRC_TARGETS_DN | View Gene Set | 6.634e-09 | 131 | 5.289e-07 | 29 | Genes dpwn-regulated in P493-6 cells (B lymphocyte) upon knockdown of TFRC [Gene ID=7037] by RNAi. | www.broad.mit.e... |
Broad NUYTTEN_EZH2_TARGETS_DN | View Gene Set | 6.497e-09 | 859 | 5.289e-07 | 29 | Genes down-regulated in PC3 cells (prostate cancer) after knockdown of EZH2 [Gene ID=2146] by RNAi. | www.broad.mit.e... |
Broad BENPORATH_CYCLING_GENES | View Gene Set | 1.401e-08 | 630 | 1.047e-06 | 31 | Genes showing cell-cycle stage-specific expression [PMID=12058064]. | www.broad.mit.e... |
Broad MUELLER_PLURINET | View Gene Set | 1.384e-08 | 294 | 1.047e-06 | 31 | Genes constituting the PluriNet protein-protein network shared by the pluripotent cells (embryonic stem cells embryonical carcinomas and induced pluripotent cells). | www.broad.mit.e... |
Broad ZHONG_RESPONSE_TO_AZACITIDINE_AND_TSA_DN | View Gene Set | 2.032e-08 | 61 | 1.473e-06 | 33 | Genes down-regulated in 3 out of 4 NSCLC cell lines (non-small cell lung cancer) after treatment with azacitidine [PubChem=9444] and TSA [PubChem=5562]. | www.broad.mit.e... |
Broad MORI_LARGE_PRE_BII_LYMPHOCYTE_UP | View Gene Set | 2.691e-08 | 52 | 1.893e-06 | 34 | Up-regulated genes in the B lymphocyte developmental signature based on expression profiling of lymphomas from the Emu-myc transgenic mice: the Large Pre-BII stage. | www.broad.mit.e... |
Broad SHEDDEN_LUNG_CANCER_POOR_SURVIVAL_A6 | View Gene Set | 3.26e-08 | 435 | 2.228e-06 | 35 | Cluster 6 of method A: up-regulation of these genes in patients with non???small cell lung cancer (NSCLC) predicts poor survival outcome. | www.broad.mit.e... |
Broad FERREIRA_EWINGS_SARCOMA_UNSTABLE_VS_STABLE_UP | View Gene Set | 3.465e-08 | 144 | 2.24e-06 | 36 | Genes up-regulated in genomically unstable Ewing's sarcoma tumors compared to the stable ones. | www.broad.mit.e... |
Broad KANG_DOXORUBICIN_RESISTANCE_UP | View Gene Set | 3.384e-08 | 53 | 2.24e-06 | 36 | Genes differentialy expressed in gastric cancer cell lines: doxorubicin [PubChem=31703] resistant vs sensitive. | www.broad.mit.e... |
Broad HOFFMANN_LARGE_TO_SMALL_PRE_BII_LYMPHOCYTE_UP | View Gene Set | 4.081e-08 | 93 | 2.569e-06 | 38 | Genes up-regulated during differentiation from large pre-BII to small pre-BII lymphocyte. | www.broad.mit.e... |
Broad ZHAN_MULTIPLE_MYELOMA_PR_UP | View Gene Set | 5.512e-08 | 43 | 3.381e-06 | 39 | Top 50 up-regulated genes in cluster PR of multiple myeloma samples characterized by increased expression of proliferation and cell cycle genes. | www.broad.mit.e... |
Broad GARY_CD5_TARGETS_DN | View Gene Set | 7.604e-08 | 415 | 4.547e-06 | 40 | Genes down-regulated in Daudi cells (B lymphocytes) stably expressing CD5 [Gene ID=921] off a plasmid vector. | www.broad.mit.e... |
Broad WHITEFORD_PEDIATRIC_CANCER_MARKERS | View Gene Set | 7.967e-08 | 92 | 4.648e-06 | 41 | Differentially expressed genes in a panel of xenografts representing 8 common pediatric tumors compared to the normal tissues. | www.broad.mit.e... |
Broad AMUNDSON_GAMMA_RADIATION_RESPONSE | View Gene Set | 1.698e-07 | 36 | 9.669e-06 | 42 | Genes down-regulated across the entire panel of NCI-60 cell lines in response to gamma radiation. | www.broad.mit.e... |
Broad HELLER_HDAC_TARGETS_SILENCED_BY_METHYLATION_DN | View Gene Set | 2.318e-07 | 241 | 1.289e-05 | 43 | Genes down-regulated in multiple myeloma (MM) cell lines treated with both decitabine [PubChem=451668] TSA [PubChem=5562]. | www.broad.mit.e... |
Broad LY_AGING_OLD_DN | View Gene Set | 3.187e-07 | 47 | 1.732e-05 | 44 | Genes up-regulated in fibroblasts from old individuals compared to those from young donors. | www.broad.mit.e... |
Broad KRIGE_RESPONSE_TO_TOSEDOSTAT_24HR_DN | View Gene Set | 3.527e-07 | 920 | 1.875e-05 | 45 | Genes down-regulated in HL-60 cells (acute promyelocytic leukemia APL) after treatment with the aminopeptidase inhibitor tosedostat (CHR-2797) [PubChem=15547703] for 24 h. | www.broad.mit.e... |
Broad PAL_PRMT5_TARGETS_UP | View Gene Set | 4.462e-07 | 178 | 2.32e-05 | 46 | Genes up-regulated in NIH-3T3 cells (fibroblast) after knockdown of PRMT5 [Gene ID=10419] by RNAi. | www.broad.mit.e... |
Broad MOREAUX_MULTIPLE_MYELOMA_BY_TACI_DN | View Gene Set | 1.225e-06 | 121 | 6.232e-05 | 47 | Genes distinguishing in multiple myeloma (MM) samples with lower expression of TACI [Gene ID=23495]. | www.broad.mit.e... |
Broad ODONNELL_TARGETS_OF_MYC_AND_TFRC_DN | View Gene Set | 2.84e-06 | 42 | 0.0001386 | 48 | Genes down-regulated in P493-6 cells (B lymphocyte) by MYC [Gene ID=4609] and up-regulated by RNAi knockdown of TFRC [Gene ID=7037]. | www.broad.mit.e... |
Broad LY_AGING_MIDDLE_DN | View Gene Set | 2.813e-06 | 15 | 0.0001386 | 48 | Genes down-regulated in fibroblasts from middle-age individuals compared to those from the young donors. | www.broad.mit.e... |
Broad KRIGE_RESPONSE_TO_TOSEDOSTAT_6HR_DN | View Gene Set | 3.104e-06 | 832 | 0.0001456 | 50 | Genes down-regulated in HL-60 cells (acute promyelocytic leukemia APL) after treatment with the aminopeptidase inhibitor tosedostat (CHR-2797) [PubChem=15547703] for 6 h. | www.broad.mit.e... |
Broad WINNEPENNINCKX_MELANOMA_METASTASIS_UP | View Gene Set | 3.048e-06 | 152 | 0.0001456 | 50 | Genes from the 254-gene classifier which were up-regulated in melanoma patients with a reported distant metastasis within 4 years. | www.broad.mit.e... |
Broad REN_BOUND_BY_E2F | View Gene Set | 3.405e-06 | 47 | 0.0001566 | 52 | Genes whose promoters were bound by E2F1 [Gene ID=1869] and E2F4 [Gene ID=1874] in the primary fibroblasts WI-38 by ChIP on chip assay. | www.broad.mit.e... |
Broad RIZ_ERYTHROID_DIFFERENTIATION | View Gene Set | 3.521e-06 | 71 | 0.0001589 | 53 | Selected gradually up-regulated genes in the TLX1 [Gene ID=3195] Tet On iEBHX15-4 cells (pro-erythroblasts). | www.broad.mit.e... |
Broad CHIANG_LIVER_CANCER_SUBCLASS_PROLIFERATION_UP | View Gene Set | 4.151e-06 | 135 | 0.0001839 | 54 | Top 200 marker genes up-regulated in the 'proliferation' subclass of hepatocellular carcinoma (HCC); characterized by increased proliferation high levels of serum AFP [Gene ID=174] and chromosomal instability. | www.broad.mit.e... |
Broad DAZARD_RESPONSE_TO_UV_NHEK_DN | View Gene Set | 4.999e-06 | 256 | 0.0002174 | 55 | Genes down-regulated in NHEK cells (normal keratinocytes) by UV-B irradiation. | www.broad.mit.e... |
Broad BLUM_RESPONSE_TO_SALIRASIB_DN | View Gene Set | 5.276e-06 | 332 | 0.0002254 | 56 | Selected genes down-regulated in response to the Ras inhibitor salirasib [PubChem=5469318] in a panel of cancer cell lines with constantly active HRAS [Gene ID=3265]. | www.broad.mit.e... |
Broad EGUCHI_CELL_CYCLE_RB1_TARGETS | View Gene Set | 8.241e-06 | 19 | 0.0003458 | 57 | RB1 [Gene ID=5925] target genes involved in cell cycle regulation: genes down-regulated by doxorubicin [PubChem=31703] only in cells expressing RB1. | www.broad.mit.e... |
Broad GINESTIER_BREAST_CANCER_20Q13_AMPLIFICATION_DN | View Gene Set | 8.803e-06 | 160 | 0.0003631 | 58 | Genes down-regulated in metastatic breast cancer tumors having type 2 amplification in the 20q13 region; involves MYBL2 STK6 and ZNF217 [Gene ID=4605 6790 7764] | www.broad.mit.e... |
Broad RUIZ_TNC_TARGETS_DN | View Gene Set | 1.032e-05 | 138 | 0.0004185 | 59 | Genes down-regulated in T98G cells (glioblastoma) by TNC [Gene ID=3371]. | www.broad.mit.e... |
Broad MORI_IMMATURE_B_LYMPHOCYTE_DN | View Gene Set | 1.54e-05 | 52 | 0.0006141 | 60 | Down-regulated genes in the B lymphocyte developmental signature based on expression profiling of lymphomas from the Emu-myc transgenic mice: the immature B stage. | www.broad.mit.e... |
Broad VECCHI_GASTRIC_CANCER_EARLY_UP | View Gene Set | 1.604e-05 | 408 | 0.0006289 | 61 | Up-regulated genes distinguishing between early gastric cancer (EGC) and normal tissue samples. | www.broad.mit.e... |
Broad LEE_EARLY_T_LYMPHOCYTE_UP | View Gene Set | 1.778e-05 | 80 | 0.000686 | 62 | Genes up-regulated at early stages of progenitor T lymphocyte maturation compared to the late stages. | www.broad.mit.e... |
Broad MATTIOLI_MGUS_VS_PCL | View Gene Set | 1.885e-05 | 109 | 0.0007156 | 63 | Genes changed in MGUS (monoclonal gammopathy of undetermined significance) compared to PCL (plasma cell leukemia) samples. | www.broad.mit.e... |
Broad RIZ_ERYTHROID_DIFFERENTIATION_CCNE1 | View Gene Set | 2.107e-05 | 38 | 0.0007876 | 64 | Selected gradually up-regulated genes whose expression profile follows that of CCNE1 [Gene ID=898] in the TLX1 [Gene ID=3195] Tet On iEBHX15-4 cells (pro-erythroblasts). | www.broad.mit.e... |
Broad LOCKWOOD_AMPLIFIED_IN_LUNG_CANCER | View Gene Set | 2.249e-05 | 167 | 0.0008277 | 65 | Overexpressed genes with amplified copy number across 27 non-small cell lung cancer (NSCLC) cell lines. | www.broad.mit.e... |
Broad RICKMAN_TUMOR_DIFFERENTIATED_WELL_VS_POORLY_UP | View Gene Set | 2.551e-05 | 220 | 0.0009247 | 66 | Up-regulated genes that vary between HNSCC (head and neck squamous cell carcinoma) groups formed on the basis of their level of pathological differentiation: well vs poorly differentiated tumors. | www.broad.mit.e... |
Broad MORI_EMU_MYC_LYMPHOMA_BY_ONSET_TIME_UP | View Gene Set | 3.766e-05 | 92 | 0.001345 | 67 | Genes correlated with the early tumor onset in the Emu-myc transgenic mouse lymphoma model. | www.broad.mit.e... |
Broad GRAHAM_CML_DIVIDING_VS_NORMAL_QUIESCENT_UP | View Gene Set | 4.84e-05 | 180 | 0.001678 | 68 | Genes up-regulated in quiescent CD34+ [Gene ID=8842] cells isolated from peripheral blood of normal donors compared to the dividing cells from CML (chronic myeloid leukemia) patients. | www.broad.mit.e... |
Broad SCHLOSSER_SERUM_RESPONSE_AUGMENTED_BY_MYC | View Gene Set | 4.825e-05 | 101 | 0.001678 | 68 | Cluster 2: genes up-regulated in B493-6 cells (B lymphocytes) by serum alone or in combination with MYC [Gene ID=4609] but not by MYC alone. | www.broad.mit.e... |
Broad HORIUCHI_WTAP_TARGETS_DN | View Gene Set | 5.628e-05 | 289 | 0.001919 | 70 | Genes down-regulated in primary endothelial cells (HUVEC) after knockdown of WTAP [Gene ID=9589] by RNAi. | www.broad.mit.e... |
Broad MEINHOLD_OVARIAN_CANCER_LOW_GRADE_DN | View Gene Set | 5.697e-05 | 18 | 0.001919 | 70 | Genes down-regulated in low grade (LMP and G1) serous ovarian carcinomas vs the higher grade invasive tumors (G2 and G3). | www.broad.mit.e... |
Broad ZHANG_BREAST_CANCER_PROGENITORS_UP | View Gene Set | 5.863e-05 | 370 | 0.001948 | 72 | Genes changed in cancer stem cells isolated from mammary tumors compared to the non-tumorigenic cells. | www.broad.mit.e... |
Broad FRASOR_RESPONSE_TO_SERM_OR_FULVESTRANT_DN | View Gene Set | 6.305e-05 | 43 | 0.002066 | 73 | Genes down-regulated in MCF-7 cells (breast cancer) by selective estrogen receptor modulators (SERM) 4-hydroxytamoxifen raloxifene or ICI 182780 but not by estradiol [PubChem=44959 5035 3478439 5757]. | www.broad.mit.e... |
Broad BOYAULT_LIVER_CANCER_SUBCLASS_G123_UP | View Gene Set | 7.129e-05 | 44 | 0.002304 | 74 | Up-regulated genes in hepatocellular carcinoma (HCC) subclass G123 defined by unsupervised clustering. | www.broad.mit.e... |
Broad HONRADO_BREAST_CANCER_BRCA1_VS_BRCA2 | View Gene Set | 8.483e-05 | 10 | 0.002705 | 75 | Genes distinguishing between breast cancer tumors bearing mutations in BRCA1 [Gene ID=672] and those with mutated BRCA2 [Gene ID=675]. | www.broad.mit.e... |
Broad SENGUPTA_NASOPHARYNGEAL_CARCINOMA_UP | View Gene Set | 8.71e-05 | 269 | 0.002714 | 76 | Genes up-regulated in nsopharyngeal carcinoma relative to the normal tissue. | www.broad.mit.e... |
Broad SMID_BREAST_CANCER_LUMINAL_A_DN | View Gene Set | 8.738e-05 | 17 | 0.002714 | 76 | Genes down-regulated in the luminal A subtype of breast cancer. | www.broad.mit.e... |
Broad KALMA_E2F1_TARGETS | View Gene Set | 9.652e-05 | 11 | 0.00296 | 78 | DNA replication genes up-regulated in a Rat-1a cell line (fibroblast) by expression of E2F1 [Gene ID=1869]. | www.broad.mit.e... |
Broad COLDREN_GEFITINIB_RESISTANCE_UP | View Gene Set | 0.0001268 | 74 | 0.003804 | 79 | Genes up-regulated in NSCLC (non-small cell lung carcinoma) cell lines resistant to gefitinib [PubChem=123631] compared to the sensitive ones. | www.broad.mit.e... |
Broad SARRIO_EPITHELIAL_MESENCHYMAL_TRANSITION_UP | View Gene Set | 0.0001272 | 16 | 0.003804 | 79 | Genes up-regulated in MCF10A cells (breast cancer) grown at low (mesenchymal phenotype) compared to those grown at high (epithelial basal-like phenotype) confluency. | www.broad.mit.e... |
Broad SHEPARD_CRUSH_AND_BURN_MUTANT_DN | View Gene Set | 0.0001403 | 147 | 0.004143 | 81 | Human orthologs of genes down-regulated in the crb ('crash and burn') zebrafish mutant that represents a loss-of-function mutation in BMYB [Gene ID=4605]. | www.broad.mit.e... |
Broad TIEN_INTESTINE_PROBIOTICS_24HR_UP | View Gene Set | 0.0001895 | 537 | 0.005435 | 82 | Genes up-regulated in Caco-2 cells (intestinal epithelium) after coculture with the probiotic bacteria L. casei for 24h. | www.broad.mit.e... |
Broad FARMER_BREAST_CANCER_CLUSTER_2 | View Gene Set | 0.0001863 | 33 | 0.005435 | 82 | Cluster 2: selected proliferation and 8q amplicon genes clustered together across breast cancer samples. | www.broad.mit.e... |
Broad PUJANA_BREAST_CANCER_LIT_INT_NETWORK | View Gene Set | 0.0001913 | 100 | 0.005435 | 82 | Genes constituting the LIT-Int network of proteins interacting with breast cancer reference proteins BRCA1 BRCA2 ATM and CHEK2 [Gene ID=672 675 472 11200]; the interactions were manually curated from the literature. | www.broad.mit.e... |
Broad HELLER_HDAC_TARGETS_DN | View Gene Set | 0.0001931 | 250 | 0.005435 | 82 | Genes down-regulated in at least one of three multiple myeloma (MM) cell lines by TSA [PubChem=5562]. | www.broad.mit.e... |
Broad SEMBA_FHIT_TARGETS_DN | View Gene Set | 0.0002386 | 10 | 0.006636 | 86 | Genes down-regulated in H1299 cells (non-small cell lung cancer NSCLC) expressing the Y144F mutant form of FHIT [Gene ID=2272]. | www.broad.mit.e... |
Broad DANG_MYC_TARGETS_UP | View Gene Set | 0.0002758 | 127 | 0.007584 | 87 | Genes up-regulated by MYC [Gene ID=4609] and whose promoters are bound by MYC according to MYC Target Gene Database. | www.broad.mit.e... |
Broad SCHLOSSER_MYC_TARGETS_AND_SERUM_RESPONSE_DN | View Gene Set | 0.0002817 | 46 | 0.007657 | 88 | Cluster 6: genes down-regulated in B493-6 cells (B lymphocytes) by MYC [Gene ID=4609] in combination with serum but not affected by serum alone; they are also up-regulated by MYC alone. | www.broad.mit.e... |
Broad RICKMAN_TUMOR_DIFFERENTIATED_MODERATELY_VS_POORLY_UP | View Gene Set | 0.0003114 | 36 | 0.008275 | 89 | Up-regulated genes that vary between HNSCC (head and neck squamous cell carcinoma) groups formed on the basis of their level of pathological differentiation: moderately vs poorly differentiated tumors. | www.broad.mit.e... |
Broad RICKMAN_TUMOR_DIFFERENTIATED_MODERATELY_VS_POORLY_DN | View Gene Set | 0.0003114 | 36 | 0.008275 | 89 | Down-regulated genes that vary between HNSCC (head and neck squamous cell carcinoma) groups formed on the basis of their level of pathological differentiation: moderately vs poorly differentiated tumors. | www.broad.mit.e... |
Broad DAZARD_UV_RESPONSE_CLUSTER_G6 | View Gene Set | 0.0003351 | 122 | 0.008807 | 91 | Cluster G6: genes increasingly down-regulated in NHEK cells (normal keratinocyte) after UV-B irradiation. | www.broad.mit.e... |
Broad GEORGES_CELL_CYCLE_MIR192_TARGETS | View Gene Set | 0.0003409 | 59 | 0.008862 | 92 | Experimentally validated direct targets of MIR192 [Gene ID=406967] microRNA; MIR192 caused cell cycle arrest in HCT116 cells (colon cancer). | www.broad.mit.e... |
Broad CHEMNITZ_RESPONSE_TO_PROSTAGLANDIN_E2_UP | View Gene Set | 0.000361 | 135 | 0.009187 | 93 | Genes up-regulated in CD4+ [Gene ID=920] T lymphocytes after stimulation with prostaglandin E2 [PubChem=5280360]. | www.broad.mit.e... |
Broad SPIELMAN_LYMPHOBLAST_EUROPEAN_VS_ASIAN_UP | View Gene Set | 0.0003574 | 469 | 0.009187 | 93 | Genes up-regulated in lymphoblastoid cells from the European population compared to those from the Asian population. | www.broad.mit.e... |
Broad MARTINEZ_RESPONSE_TO_TRABECTEDIN_DN | View Gene Set | 0.0003796 | 212 | 0.009558 | 95 | Genes down-regulated in at least 8 of 11 sarcoma cell lines by trabectedin [PubChem=3199]. | www.broad.mit.e... |
Broad MOREAUX_B_LYMPHOCYTE_MATURATION_BY_TACI_DN | View Gene Set | 0.0003865 | 42 | 0.009631 | 96 | Genes down-regulated in normal bone marrow plasma cells (BMPC) compared to polyclonal plasmablasts (PPC) that also distinguished multiple myeloma (MM) samples by expression of levels of TACI [Gene ID=23495]. | www.broad.mit.e... |
Broad WEI_MYCN_TARGETS_WITH_E_BOX | View Gene Set | 0.0004034 | 757 | 0.009902 | 97 | Genes whose promoters contain E-box motifs and whose expression changed in MYCN-3 cells (neuroblastoma) upon induction of MYCN [Gene ID=4613]. | www.broad.mit.e... |
Broad TARTE_PLASMA_CELL_VS_PLASMABLAST_DN | View Gene Set | 0.0004057 | 303 | 0.009902 | 97 | Genes down-regulated in mature plasma cells compared with plasmablastic B lymphocytes. | www.broad.mit.e... |
Broad NIKOLSKY_BREAST_CANCER_20Q12_Q13_AMPLICON | View Gene Set | 0.0004245 | 134 | 0.01026 | 99 | Genes within amplicon 20q12-q13 identified in a copy number alterations study of 191 breast tumor samples. | www.broad.mit.e... |
Broad FINETTI_BREAST_CANCER_KINOME_RED | View Gene Set | 0.0004507 | 15 | 0.01067 | 100 | Genes in the red cluster of protein kinases distinguishing between luminal A and basal breast cancer subtypes. | www.broad.mit.e... |
Broad FINETTI_BREAST_CANCER_BASAL_VS_LUMINAL | View Gene Set | 0.0004507 | 15 | 0.01067 | 100 | Protein kinases distinguishing between basal and luminal A subtypes of breast cancer. | www.broad.mit.e... |
Broad BASAKI_YBX1_TARGETS_UP | View Gene Set | 0.0004967 | 279 | 0.01165 | 102 | Genes up-regulated in SKOC-3 cells (ovarian cancer) after YB-1 (YBX1) [Gene ID=4904] knockdown by RNAi. | www.broad.mit.e... |
Broad PENG_GLUTAMINE_DEPRIVATION_DN | View Gene Set | 0.0005091 | 84 | 0.01182 | 103 | Genes down-regulated in BJAB cells (B-lymphoma) after glutamine [PubChem=738] deprivation. | www.broad.mit.e... |
Broad GRAHAM_NORMAL_QUIESCENT_VS_NORMAL_DIVIDING_DN | View Gene Set | 0.0005532 | 86 | 0.01272 | 104 | Genes down-regulated in quiescent vs dividing CD34+ [Gene ID=8842] cells isolated from peripheral blood of normal donors. | www.broad.mit.e... |
Broad BENPORATH_ES_CORE_NINE_CORRELATED | View Gene Set | 0.0006937 | 100 | 0.0158 | 105 | Breast cancer compendium: 100 transcription regulators showing most correlated expression with the 9 'embryonic stem cell' transcription factors that are preferentially and coordinately overexpressed in the high-grade ER-negative breast cancer tumors. | www.broad.mit.e... |
Broad SHEN_SMARCA2_TARGETS_UP | View Gene Set | 0.000713 | 406 | 0.01609 | 106 | Genes whose expression positively correlated with that of SMARCA2 [Gene ID=6595] in prostate cancer samples. | www.broad.mit.e... |
Broad SCIAN_CELL_CYCLE_TARGETS_OF_TP53_AND_TP73_DN | View Gene Set | 0.0007274 | 22 | 0.01626 | 107 | Cell cycle genes changed in H1299 cells (lung cancer) after overexpression of either P53 [Gene ID=7157] or P73 [Gene ID=7161]. | www.broad.mit.e... |
Broad YU_MYC_TARGETS_UP | View Gene Set | 0.0007706 | 37 | 0.01707 | 108 | Genes up-regulated in B cell lymphoma tumors expressing an activated form of MYC [Gene ID=4609]. | www.broad.mit.e... |
Broad GARCIA_TARGETS_OF_FLI1_AND_DAX1_DN | View Gene Set | 0.0008883 | 148 | 0.01949 | 109 | Genes down-regulated in the A673 cells (Ewing sarcoma) after double knockdown of both FLI1 and DAX1 [Gene ID=2313 190] by RNAi. | www.broad.mit.e... |
Broad KAUFFMANN_DNA_REPAIR_GENES | View Gene Set | 0.0009753 | 205 | 0.02121 | 110 | Genes involved in DNA repair compiled manually by the authors. | www.broad.mit.e... |
Broad BANDRES_RESPONSE_TO_CARMUSTIN_WITHOUT_MGMT_24HR_DN | View Gene Set | 0.001006 | 7 | 0.02168 | 111 | Genes down-regulated in A172 cells (glioma does not express MGMT [Gene ID=4255]) by carmustine [PubChem=2578] at 24 h. | www.broad.mit.e... |
Broad LY_AGING_PREMATURE_DN | View Gene Set | 0.001034 | 24 | 0.02207 | 112 | Genes down-regulated in fibroblasts from patients with Hutchinson-Gilford progeria (premature aging) compared to those from normal young individuals. | www.broad.mit.e... |
Broad CHANG_CYCLING_GENES | View Gene Set | 0.001068 | 49 | 0.02261 | 113 | Fibroblast serum response genes showing periodic expression during the cell cycle; excluded from the core serum response signature. | www.broad.mit.e... |
Broad MONTERO_THYROID_CANCER_POOR_SURVIVAL_UP | View Gene Set | 0.001156 | 10 | 0.02425 | 114 | Up-regulated genes predicting poor survival of patients with thyroid carcinoma. | www.broad.mit.e... |
Broad LE_EGR2_TARGETS_UP | View Gene Set | 0.001346 | 100 | 0.028 | 115 | Genes up-regulated in P14 nerves of transgenic mice having hypomorhic (reduced function) allele of EGR2 [Gene ID=1959]. | www.broad.mit.e... |
Broad GRADE_COLON_CANCER_UP | View Gene Set | 0.001429 | 711 | 0.02948 | 116 | Up-regulated genes in colon carcinoma tumors compared to the matched normal mucosa samples. | www.broad.mit.e... |
Broad GENTILE_UV_RESPONSE_CLUSTER_D4 | View Gene Set | 0.001451 | 49 | 0.02967 | 117 | Cluster d4: genes progressively down-regulated in WS1 cells (fibroblast) through 12 h after irradiation with high dose UV-C. | www.broad.mit.e... |
Broad XU_HGF_TARGETS_INDUCED_BY_AKT1_48HR_DN | View Gene Set | 0.001465 | 17 | 0.02969 | 118 | Genes down-regulated in DU-145 cells (prostate cancer) in the absence but not in the presence of a dominant negative form of AKT1 [Gene ID=207] upon exposure to HGF [Gene ID=3082] for 48 hr. | www.broad.mit.e... |
Broad WELCSH_BRCA1_TARGETS_1_DN | View Gene Set | 0.001536 | 124 | 0.03087 | 119 | Upregulated by induction of exogenous BRCA1 in EcR-293 cells | www.broad.mit.e... |
Broad RHODES_UNDIFFERENTIATED_CANCER | View Gene Set | 0.001582 | 60 | 0.03154 | 120 | Genes commonly up-regulated in undifferentiated cancer relative to well-differentiated cancer based on the meta-analysis of the OncoMine gene expression database. | www.broad.mit.e... |
Broad FURUKAWA_DUSP6_TARGETS_PCI35_DN | View Gene Set | 0.001637 | 66 | 0.03237 | 121 | Genes down-regulated in PCI-35 cells (pancreatic cancer lack endogenous DUSP6 [Gene ID=1848]) upon expression of DUSP6 off an adenoviral vector. | www.broad.mit.e... |
Broad RAMALHO_STEMNESS_UP | View Gene Set | 0.001842 | 192 | 0.03612 | 122 | Genes enriched in embryonic neural and hematopoietic stem cells. | www.broad.mit.e... |
Broad SCHLOSSER_MYC_TARGETS_REPRESSED_BY_SERUM | View Gene Set | 0.002117 | 154 | 0.04117 | 123 | Cluster 7: genes up-regulated in B493-6 cells (B lymphocytes) by MYC [Gene ID=4609] and down-regulated by the combination of MYC and serum. | www.broad.mit.e... |
Broad AGUIRRE_PANCREATIC_CANCER_COPY_NUMBER_UP | View Gene Set | 0.002385 | 288 | 0.046 | 124 | Up-regulated genes whose expression correlates with copy number gains in pancreatic adenocarcinoma cell lines and primary tumor specimens. | www.broad.mit.e... |
Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
Broad BIOCARTA_CARM_ER_PATHWAY | View Gene Set | 8.049e-05 | 35 | 0.01747 | 1 | CARM1 and Regulation of the Estrogen Receptor | www.broad.mit.e... |
Broad BIOCARTA_RANMS_PATHWAY | View Gene Set | 0.0002789 | 10 | 0.03026 | 2 | Role of Ran in mitotic spindle regulation | www.broad.mit.e... |
Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
Broad KEGG_SPLICEOSOME | View Gene Set | 2.326e-08 | 118 | 4.326e-06 | 1 | Spliceosome | www.broad.mit.e... |
Broad KEGG_RNA_DEGRADATION | View Gene Set | 7.784e-06 | 59 | 0.0007239 | 2 | RNA degradation | www.broad.mit.e... |
Broad KEGG_CELL_CYCLE | View Gene Set | 2.745e-05 | 128 | 0.001702 | 3 | Cell cycle | www.broad.mit.e... |
Broad KEGG_BASE_EXCISION_REPAIR | View Gene Set | 0.0001001 | 35 | 0.004652 | 4 | Base excision repair | www.broad.mit.e... |
Broad KEGG_DNA_REPLICATION | View Gene Set | 0.001159 | 36 | 0.04313 | 5 | DNA replication | www.broad.mit.e... |
Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
Broad REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA | View Gene Set | 6.464e-10 | 128 | 2.78e-07 | 1 | Genes involved in Processing of Capped Intron-Containing Pre-mRNA | www.broad.mit.e... |
Broad REACTOME_MRNA_SPLICING | View Gene Set | 4.305e-09 | 97 | 9.257e-07 | 2 | Genes involved in mRNA Splicing | www.broad.mit.e... |
Broad REACTOME_MITOTIC_M_M_G1_PHASES | View Gene Set | 8.423e-09 | 157 | 1.207e-06 | 3 | Genes involved in Mitotic M-M/G1 phases | www.broad.mit.e... |
Broad REACTOME_ELONGATION_AND_PROCESSING_OF_CAPPED_TRANSCRIPTS | View Gene Set | 1.839e-08 | 124 | 1.977e-06 | 4 | Genes involved in Elongation and Processing of Capped Transcripts | www.broad.mit.e... |
Broad REACTOME_GENE_EXPRESSION | View Gene Set | 3.244e-08 | 415 | 2.79e-06 | 5 | Genes involved in Gene Expression | www.broad.mit.e... |
Broad REACTOME_METABOLISM_OF_RNA | View Gene Set | 7.186e-08 | 95 | 5.15e-06 | 6 | Genes involved in Metabolism of RNA | www.broad.mit.e... |
Broad REACTOME_FORMATION_AND_MATURATION_OF_MRNA_TRANSCRIPT | View Gene Set | 1.028e-07 | 142 | 6.314e-06 | 7 | Genes involved in Formation and Maturation of mRNA Transcript | www.broad.mit.e... |
Broad REACTOME_MITOTIC_PROMETAPHASE | View Gene Set | 2.446e-07 | 92 | 1.315e-05 | 8 | Genes involved in Mitotic Prometaphase | www.broad.mit.e... |
Broad REACTOME_CELL_CYCLE_MITOTIC | View Gene Set | 6.363e-07 | 306 | 3.04e-05 | 9 | Genes involved in Cell Cycle Mitotic | www.broad.mit.e... |
Broad REACTOME_DEADENYLATION_OF_MRNA | View Gene Set | 4.108e-06 | 21 | 0.0001767 | 10 | Genes involved in Deadenylation of mRNA | www.broad.mit.e... |
Broad REACTOME_METABOLISM_OF_MRNA | View Gene Set | 1.272e-05 | 45 | 0.0004971 | 11 | Genes involved in Metabolism of mRNA | www.broad.mit.e... |
Broad REACTOME_SNRNP_ASSEMBLY | View Gene Set | 0.0005486 | 50 | 0.01966 | 12 | Genes involved in snRNP Assembly | www.broad.mit.e... |
Broad REACTOME_INACTIVATION_OF_APC_VIA_DIRECT_INHIBITION_OF_THE_APCOMPLEX | View Gene Set | 0.001055 | 18 | 0.0324 | 13 | Genes involved in Inactivation of APC/C via direct inhibition of the APC/C complex | www.broad.mit.e... |
Broad REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRON_CONTAINING_TRANSCRIPT | View Gene Set | 0.001021 | 42 | 0.0324 | 13 | Genes involved in Transport of Mature mRNA derived from an Intron-Containing Transcript | www.broad.mit.e... |
Broad REACTOME_CELL_CYCLE_CHECKPOINTS | View Gene Set | 0.001403 | 110 | 0.04021 | 15 | Genes involved in Cell Cycle Checkpoints | www.broad.mit.e... |
Broad REACTOME_REV_MEDIATED_NUCLEAR_EXPORT_OF_HIV1_RNA | View Gene Set | 0.001555 | 31 | 0.04052 | 16 | Genes involved in Rev-mediated nuclear export of HIV-1 RNA | www.broad.mit.e... |
Broad REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS | View Gene Set | 0.001602 | 29 | 0.04052 | 16 | Genes involved in Transport of Ribonucleoproteins into the Host Nucleus | www.broad.mit.e... |
Broad REACTOME_NUCLEAR_IMPORT_OF_REV_PROTEIN | View Gene Set | 0.001754 | 30 | 0.0419 | 18 | Genes involved in Nuclear import of Rev protein | www.broad.mit.e... |
Broad REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY | View Gene Set | 0.002192 | 29 | 0.04961 | 19 | Genes involved in NEP/NS2 Interacts with the Cellular Export Machinery | www.broad.mit.e... |
Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
Broad GCCATNTTG_V$YY1_Q6 | View Gene Set | 2.084e-13 | 289 | 1.282e-10 | 1 | Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GCCATNTTG which matches annotation for YY1: YY1 transcription factor | www.broad.mit.e... |
Broad V$NFMUE1_Q6 | View Gene Set | 1.591e-11 | 175 | 4.893e-09 | 2 | Genes with promoter regions [-2kb 2kb] around transcription start site containing motif CGGCCATCT. Motif does not match any known transcription factor | www.broad.mit.e... |
Broad V$E2F_Q6 | View Gene Set | 4.641e-08 | 165 | 9.514e-06 | 3 | Genes with promoter regions [-2kb 2kb] around transcription start site containing motif TTTSGCGS. Motif does not match any known transcription factor | www.broad.mit.e... |
Broad V$E2F1_Q6 | View Gene Set | 6.576e-08 | 167 | 1.011e-05 | 4 | Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TTTSGCGS which matches annotation for E2F1: E2F transcription factor 1 | www.broad.mit.e... |
Broad V$E2F_Q4 | View Gene Set | 1.969e-07 | 166 | 2.422e-05 | 5 | Genes with promoter regions [-2kb 2kb] around transcription start site containing motif TTTSGCGS. Motif does not match any known transcription factor | www.broad.mit.e... |
Broad TAANNYSGCG_UNKNOWN | View Gene Set | 5.75e-07 | 60 | 5.894e-05 | 6 | Genes with promoter regions [-2kb 2kb] around transcription start site containing motif TAANNYSGCG. Motif does not match any known transcription factor | www.broad.mit.e... |
Broad V$E2F1_Q4_01 | View Gene Set | 1.054e-06 | 167 | 9.259e-05 | 7 | Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TTTSGCGSG which matches annotation for E2F<br> TFDP1: transcription factor Dp-1 | www.broad.mit.e... |
Broad V$YY1_02 | View Gene Set | 1.951e-06 | 168 | 0.0001333 | 8 | Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNNCGGCCATCTTGNCTSNW which matches annotation for YY1: YY1 transcription factor | www.broad.mit.e... |
Broad V$E2F1_Q6_01 | View Gene Set | 1.795e-06 | 177 | 0.0001333 | 8 | Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NTTTCGCGCS which matches annotation for E2F1: E2F transcription factor 1 | www.broad.mit.e... |
Broad RCGCANGCGY_V$NRF1_Q6 | View Gene Set | 3.284e-06 | 580 | 0.0002019 | 10 | Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif RCGCANGCGY which matches annotation for NRF1: nuclear respiratory factor 1 | www.broad.mit.e... |
Broad V$E2F_02 | View Gene Set | 4.257e-06 | 169 | 0.0002312 | 11 | Genes with promoter regions [-2kb 2kb] around transcription start site containing motif TTTSGCGC. Motif does not match any known transcription factor | www.broad.mit.e... |
Broad V$E2F_Q3_01 | View Gene Set | 4.512e-06 | 171 | 0.0002312 | 11 | Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TTTSGCGSG which matches annotation for E2F<br> TFDP1: transcription factor Dp-1 | www.broad.mit.e... |
Broad V$E2F1DP1_01 | View Gene Set | 7.776e-06 | 169 | 0.0003188 | 13 | Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TTTCSCGC which matches annotation for E2F1: E2F transcription factor 1<br> TFDP1: transcription factor Dp-1 | www.broad.mit.e... |
Broad V$E2F1DP2_01 | View Gene Set | 7.776e-06 | 169 | 0.0003188 | 13 | Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TTTSSCGC which matches annotation for E2F1: E2F transcription factor 1<br> TFDP2: transcription factor Dp-2 (E2F dimerization partner 2) | www.broad.mit.e... |
Broad V$E2F4DP2_01 | View Gene Set | 7.776e-06 | 169 | 0.0003188 | 13 | Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TTTCSCGC which matches annotation for E2F4: E2F transcription factor 4 p107/p130-binding<br> TFDP2: transcription factor Dp-2 (E2F dimerization partner 2) | www.broad.mit.e... |
Broad V$YY1_Q6 | View Gene Set | 8.43e-06 | 166 | 0.000324 | 16 | Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GCCATNTTN which matches annotation for YY1: YY1 transcription factor | www.broad.mit.e... |
Broad TCCCRNNRTGC_UNKNOWN | View Gene Set | 1.532e-05 | 130 | 0.0005541 | 17 | Genes with promoter regions [-2kb 2kb] around transcription start site containing motif TCCCRNNRTGC. Motif does not match any known transcription factor | www.broad.mit.e... |
Broad V$E2F1_Q4 | View Gene Set | 1.735e-05 | 178 | 0.0005673 | 18 | Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NTTSGCGG which matches annotation for E2F1: E2F transcription factor 1 | www.broad.mit.e... |
Broad V$E2F_Q4_01 | View Gene Set | 1.753e-05 | 171 | 0.0005673 | 18 | Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NCSCGCSAAAN which matches annotation for E2F<br> TFDP1: transcription factor Dp-1 | www.broad.mit.e... |
Broad KCCGNSWTTT_UNKNOWN | View Gene Set | 2.144e-05 | 76 | 0.0006591 | 20 | Genes with promoter regions [-2kb 2kb] around transcription start site containing motif KCCGNSWTTT. Motif does not match any known transcription factor | www.broad.mit.e... |
Broad SGCGSSAAA_V$E2F1DP2_01 | View Gene Set | 2.339e-05 | 122 | 0.0006849 | 21 | Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif SGCGSSAAA which matches annotation for E2F1: E2F transcription factor 1<br> TFDP1: transcription factor Dp-1<br> RB1: retinoblastoma 1 (including osteosarcoma) | www.broad.mit.e... |
Broad GGCNKCCATNK_UNKNOWN | View Gene Set | 2.834e-05 | 84 | 0.0007923 | 22 | Genes with promoter regions [-2kb 2kb] around transcription start site containing motif GGCNKCCATNK. Motif does not match any known transcription factor | www.broad.mit.e... |
Broad V$NRF1_Q6 | View Gene Set | 7.771e-05 | 151 | 0.002078 | 23 | Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif CGCATGCGCR which matches annotation for NRF1: nuclear respiratory factor 1 | www.broad.mit.e... |
Broad AAGWWRNYGGC_UNKNOWN | View Gene Set | 0.0001239 | 85 | 0.00293 | 24 | Genes with promoter regions [-2kb 2kb] around transcription start site containing motif AAGWWRNYGGC. Motif does not match any known transcription factor | www.broad.mit.e... |
Broad V$E2F4DP1_01 | View Gene Set | 0.0001149 | 174 | 0.00293 | 24 | Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TTTSGCGC which matches annotation for E2F4: E2F transcription factor 4 p107/p130-binding<br> TFDP1: transcription factor Dp-1 | www.broad.mit.e... |
Broad V$E2F_Q6_01 | View Gene Set | 0.0001226 | 167 | 0.00293 | 24 | Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NKCGCGCSAAAN which matches annotation for E2F<br> TFDP1: transcription factor Dp-1 | www.broad.mit.e... |
Broad ACAWNRNSRCGG_UNKNOWN | View Gene Set | 0.0001337 | 50 | 0.003046 | 27 | Genes with promoter regions [-2kb 2kb] around transcription start site containing motif ACAWNRNSRCGG. Motif does not match any known transcription factor | www.broad.mit.e... |
Broad V$E2F_Q3 | View Gene Set | 0.0001456 | 162 | 0.003089 | 28 | Genes with promoter regions [-2kb 2kb] around transcription start site containing motif TTTCGCGC. Motif does not match any known transcription factor | www.broad.mit.e... |
Broad V$E2F1_Q3 | View Gene Set | 0.0001454 | 176 | 0.003089 | 28 | Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NKTSSCGC which matches annotation for E2F1: E2F transcription factor 1 | www.broad.mit.e... |
Broad V$GABP_B | View Gene Set | 0.0001866 | 162 | 0.003826 | 30 | Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif VCCGGAAGNGCR which matches annotation for GABPA: GA binding protein transcription factor alpha subunit 60kDa<br> GABPB2: GA binding protein transcription factor beta subunit 2 | www.broad.mit.e... |
Broad V$E2F1DP1RB_01 | View Gene Set | 0.00025 | 168 | 0.004959 | 31 | Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TTTSGCGC which matches annotation for E2F1: E2F transcription factor 1<br> TFDP1: transcription factor Dp-1<br> RB1: retinoblastoma 1 (including osteosarcoma) | www.broad.mit.e... |
Broad GGCKCATGS_UNKNOWN | View Gene Set | 0.0004913 | 43 | 0.009442 | 32 | Genes with promoter regions [-2kb 2kb] around transcription start site containing motif GGCKCATGS. Motif does not match any known transcription factor | www.broad.mit.e... |
Broad GATGKMRGCG_UNKNOWN | View Gene Set | 0.0006567 | 47 | 0.01224 | 33 | Genes with promoter regions [-2kb 2kb] around transcription start site containing motif GATGKMRGCG. Motif does not match any known transcription factor | www.broad.mit.e... |
Broad TGCGCANK_UNKNOWN | View Gene Set | 0.000829 | 361 | 0.015 | 34 | Genes with promoter regions [-2kb 2kb] around transcription start site containing motif TGCGCANK. Motif does not match any known transcription factor | www.broad.mit.e... |
Broad V$MYCMAX_01 | View Gene Set | 0.0009043 | 189 | 0.01589 | 35 | Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNACCACGTGGTNN which matches annotation for MYC: v-myc myelocytomatosis viral oncogene homolog (avian)<br> MAX: MYC associated factor X | www.broad.mit.e... |
Broad GCGSCMNTTT_UNKNOWN | View Gene Set | 0.001112 | 49 | 0.019 | 36 | Genes with promoter regions [-2kb 2kb] around transcription start site containing motif GCGSCMNTTT. Motif does not match any known transcription factor | www.broad.mit.e... |
Broad V$E2F_03 | View Gene Set | 0.001329 | 171 | 0.02209 | 37 | Genes with promoter regions [-2kb 2kb] around transcription start site containing motif TTTSGCGCGMNR. Motif does not match any known transcription factor | www.broad.mit.e... |
Broad V$AP2_Q6 | View Gene Set | 0.00152 | 188 | 0.0246 | 38 | Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif MKCCCSCNGGCG which matches annotation for GTF3A: general transcription factor IIIA | www.broad.mit.e... |
Broad V$ZF5_B | View Gene Set | 0.002213 | 184 | 0.03489 | 39 | Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NRNGNGCGCGCWN which matches annotation for ZFP161: zinc finger protein 161 homolog (mouse) | www.broad.mit.e... |
Broad V$ELK1_02 | View Gene Set | 0.002339 | 170 | 0.03596 | 40 | Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNNNCCGGAARTNN which matches annotation for ELK1: ELK1 member of ETS oncogene family | www.broad.mit.e... |
Broad KMCATNNWGGA_UNKNOWN | View Gene Set | 0.002592 | 60 | 0.03888 | 41 | Genes with promoter regions [-2kb 2kb] around transcription start site containing motif KMCATNNWGGA. Motif does not match any known transcription factor | www.broad.mit.e... |
Broad V$MZF1_02 | View Gene Set | 0.003057 | 175 | 0.04476 | 42 | Genes with promoter regions [-2kb 2kb] around transcription start site containing motif KNNNKAGGGGNAA. Motif does not match any known transcription factor | www.broad.mit.e... |
Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
Broad GNF2_CCNA2 | View Gene Set | 1.607e-18 | 62 | 6.862e-16 | 1 | Neighborhood of CCNA2 | www.broad.mit.e... |
Broad GNF2_CCNB2 | View Gene Set | 2.525e-17 | 53 | 5.392e-15 | 2 | Neighborhood of CCNB2 | www.broad.mit.e... |
Broad GNF2_PCNA | View Gene Set | 9.5e-17 | 62 | 1.352e-14 | 3 | Neighborhood of PCNA | www.broad.mit.e... |
Broad GNF2_CDC20 | View Gene Set | 1.687e-16 | 52 | 1.8e-14 | 4 | Neighborhood of CDC20 | www.broad.mit.e... |
Broad GNF2_CDC2 | View Gene Set | 3.012e-16 | 56 | 2.572e-14 | 5 | Neighborhood of CDC2 | www.broad.mit.e... |
Broad GNF2_CENPF | View Gene Set | 4.761e-15 | 56 | 2.904e-13 | 6 | Neighborhood of CENPF | www.broad.mit.e... |
Broad GNF2_SMC4L1 | View Gene Set | 4.258e-15 | 75 | 2.904e-13 | 6 | Neighborhood of SMC4L1 | www.broad.mit.e... |
Broad GNF2_RRM1 | View Gene Set | 8.683e-15 | 82 | 4.635e-13 | 8 | Neighborhood of RRM1 | www.broad.mit.e... |
Broad MORF_BUB3 | View Gene Set | 1.136e-14 | 256 | 5.392e-13 | 9 | Neighborhood of BUB3 | www.broad.mit.e... |
Broad GNF2_HMMR | View Gene Set | 4.461e-14 | 43 | 1.905e-12 | 10 | Neighborhood of HMMR | www.broad.mit.e... |
Broad MORF_HDAC2 | View Gene Set | 6.069e-14 | 256 | 2.356e-12 | 11 | Neighborhood of HDAC2 | www.broad.mit.e... |
Broad GNF2_BUB1B | View Gene Set | 6.972e-14 | 46 | 2.481e-12 | 12 | Neighborhood of BUB1B | www.broad.mit.e... |
Broad GNF2_RRM2 | View Gene Set | 1.345e-13 | 36 | 4.416e-12 | 13 | Neighborhood of RRM2 | www.broad.mit.e... |
Broad MORF_PRKDC | View Gene Set | 4.201e-13 | 173 | 1.196e-11 | 14 | Neighborhood of PRKDC | www.broad.mit.e... |
Broad MORF_RAD23A | View Gene Set | 4.036e-13 | 316 | 1.196e-11 | 14 | Neighborhood of RAD23A | www.broad.mit.e... |
Broad GNF2_ESPL1 | View Gene Set | 7.39e-13 | 35 | 1.971e-11 | 16 | Neighborhood of ESPL1 | www.broad.mit.e... |
Broad GNF2_DEK | View Gene Set | 7.845e-13 | 45 | 1.971e-11 | 16 | Neighborhood of DEK | www.broad.mit.e... |
Broad MORF_ACP1 | View Gene Set | 1.294e-12 | 178 | 3.01e-11 | 18 | Neighborhood of ACP1 | www.broad.mit.e... |
Broad GNF2_MCM5 | View Gene Set | 1.339e-12 | 51 | 3.01e-11 | 18 | Neighborhood of MCM5 | www.broad.mit.e... |
Broad GNF2_PA2G4 | View Gene Set | 1.948e-12 | 73 | 4.158e-11 | 20 | Neighborhood of PA2G4 | www.broad.mit.e... |
Broad MORF_AATF | View Gene Set | 6.098e-12 | 179 | 1.24e-10 | 21 | Neighborhood of AATF | www.broad.mit.e... |
Broad GNF2_TTK | View Gene Set | 1.292e-11 | 34 | 2.509e-10 | 22 | Neighborhood of TTK | www.broad.mit.e... |
Broad GNF2_MCM4 | View Gene Set | 1.369e-11 | 50 | 2.541e-10 | 23 | Neighborhood of MCM4 | www.broad.mit.e... |
Broad GNF2_APEX1 | View Gene Set | 2.594e-11 | 72 | 4.615e-10 | 24 | Neighborhood of APEX1 | www.broad.mit.e... |
Broad GNF2_MKI67 | View Gene Set | 4.257e-11 | 26 | 7.27e-10 | 25 | Neighborhood of MKI67 | www.broad.mit.e... |
Broad MORF_FBL | View Gene Set | 4.563e-11 | 121 | 7.494e-10 | 26 | Neighborhood of FBL | www.broad.mit.e... |
Broad MORF_UBE2I | View Gene Set | 4.764e-11 | 208 | 7.534e-10 | 27 | Neighborhood of UBE2I | www.broad.mit.e... |
Broad MORF_DDB1 | View Gene Set | 5.513e-11 | 220 | 8.407e-10 | 28 | Neighborhood of DDB1 | www.broad.mit.e... |
Broad MORF_DNMT1 | View Gene Set | 6.099e-11 | 105 | 8.98e-10 | 29 | Neighborhood of DNMT1 | www.broad.mit.e... |
Broad GNF2_RFC4 | View Gene Set | 1.502e-10 | 57 | 2.138e-09 | 30 | Neighborhood of RFC4 | www.broad.mit.e... |
Broad MORF_ANP32B | View Gene Set | 1.82e-10 | 174 | 2.507e-09 | 31 | Neighborhood of ANP32B | www.broad.mit.e... |
Broad MORF_PCNA | View Gene Set | 1.967e-10 | 71 | 2.625e-09 | 32 | Neighborhood of PCNA | www.broad.mit.e... |
Broad MORF_GNB1 | View Gene Set | 2.458e-10 | 276 | 3.181e-09 | 33 | Neighborhood of GNB1 | www.broad.mit.e... |
Broad GNF2_CENPE | View Gene Set | 2.602e-10 | 37 | 3.267e-09 | 34 | Neighborhood of CENPE | www.broad.mit.e... |
Broad GNF2_H2AFX | View Gene Set | 4.734e-10 | 28 | 5.776e-09 | 35 | Neighborhood of H2AFX | www.broad.mit.e... |
Broad MORF_EIF3S2 | View Gene Set | 4.964e-10 | 220 | 5.888e-09 | 36 | Neighborhood of EIF3S2 | www.broad.mit.e... |
Broad MORF_BUB1B | View Gene Set | 6.178e-10 | 61 | 7.13e-09 | 37 | Neighborhood of BUB1B | www.broad.mit.e... |
Broad GNF2_FEN1 | View Gene Set | 6.364e-10 | 49 | 7.152e-09 | 38 | Neighborhood of FEN1 | www.broad.mit.e... |
Broad MORF_RAD54L | View Gene Set | 1.145e-09 | 94 | 1.253e-08 | 39 | Neighborhood of RAD54L | www.broad.mit.e... |
Broad MORF_PRKAG1 | View Gene Set | 1.579e-09 | 202 | 1.686e-08 | 40 | Neighborhood of PRKAG1 | www.broad.mit.e... |
Broad MORF_XRCC5 | View Gene Set | 2.169e-09 | 210 | 2.258e-08 | 41 | Neighborhood of XRCC5 | www.broad.mit.e... |
Broad MORF_DEK | View Gene Set | 2.497e-09 | 229 | 2.539e-08 | 42 | Neighborhood of DEK | www.broad.mit.e... |
Broad MORF_RPA2 | View Gene Set | 2.803e-09 | 170 | 2.784e-08 | 43 | Neighborhood of RPA2 | www.broad.mit.e... |
Broad MORF_ESPL1 | View Gene Set | 3.149e-09 | 58 | 3.056e-08 | 44 | Neighborhood of ESPL1 | www.broad.mit.e... |
Broad GNF2_CKS2 | View Gene Set | 4.12e-09 | 45 | 3.91e-08 | 45 | Neighborhood of CKS2 | www.broad.mit.e... |
Broad MORF_CSNK2B | View Gene Set | 6.147e-09 | 256 | 5.706e-08 | 46 | Neighborhood of CSNK2B | www.broad.mit.e... |
Broad MORF_G22P1 | View Gene Set | 7.503e-09 | 145 | 6.816e-08 | 47 | Neighborhood of G22P1 | www.broad.mit.e... |
Broad MORF_RFC4 | View Gene Set | 8.413e-09 | 137 | 7.484e-08 | 48 | Neighborhood of RFC4 | www.broad.mit.e... |
Broad GNF2_HDAC1 | View Gene Set | 1.381e-08 | 85 | 1.203e-07 | 49 | Neighborhood of HDAC1 | www.broad.mit.e... |
Broad GNF2_RFC3 | View Gene Set | 1.765e-08 | 38 | 1.508e-07 | 50 | Neighborhood of RFC3 | www.broad.mit.e... |
Broad MORF_BUB1 | View Gene Set | 1.986e-08 | 49 | 1.662e-07 | 51 | Neighborhood of BUB1 | www.broad.mit.e... |
Broad GNF2_KPNB1 | View Gene Set | 4.812e-08 | 52 | 3.951e-07 | 52 | Neighborhood of KPNB1 | www.broad.mit.e... |
Broad GNF2_SMC2L1 | View Gene Set | 5.474e-08 | 30 | 4.41e-07 | 53 | Neighborhood of SMC2L1 | www.broad.mit.e... |
Broad GNF2_HAT1 | View Gene Set | 8.494e-08 | 45 | 6.716e-07 | 54 | Neighborhood of HAT1 | www.broad.mit.e... |
Broad GNF2_DENR | View Gene Set | 9.259e-08 | 39 | 7.189e-07 | 55 | Neighborhood of DENR | www.broad.mit.e... |
Broad GNF2_ANP32B | View Gene Set | 1.073e-07 | 29 | 8.182e-07 | 56 | Neighborhood of ANP32B | www.broad.mit.e... |
Broad GNF2_TDG | View Gene Set | 1.147e-07 | 23 | 8.594e-07 | 57 | Neighborhood of TDG | www.broad.mit.e... |
Broad MORF_SOD1 | View Gene Set | 1.833e-07 | 247 | 1.35e-06 | 58 | Neighborhood of SOD1 | www.broad.mit.e... |
Broad GCM_DENR | View Gene Set | 1.952e-07 | 40 | 1.412e-06 | 59 | Neighborhood of DENR | www.broad.mit.e... |
Broad MORF_PPP1CC | View Gene Set | 2.548e-07 | 150 | 1.813e-06 | 60 | Neighborhood of PPP1CC | www.broad.mit.e... |
Broad MORF_PHB | View Gene Set | 2.692e-07 | 112 | 1.884e-06 | 61 | Neighborhood of PHB | www.broad.mit.e... |
Broad GNF2_ELAC2 | View Gene Set | 2.89e-07 | 32 | 1.99e-06 | 62 | Neighborhood of ELAC2 | www.broad.mit.e... |
Broad GNF2_CKS1B | View Gene Set | 4.905e-07 | 36 | 3.324e-06 | 63 | Neighborhood of CKS1B | www.broad.mit.e... |
Broad MORF_RRM1 | View Gene Set | 5.349e-07 | 90 | 3.568e-06 | 64 | Neighborhood of RRM1 | www.broad.mit.e... |
Broad MORF_CDC16 | View Gene Set | 5.69e-07 | 67 | 3.738e-06 | 65 | Neighborhood of CDC16 | www.broad.mit.e... |
Broad MORF_HDAC1 | View Gene Set | 6.347e-07 | 222 | 4.106e-06 | 66 | Neighborhood of HDAC1 | www.broad.mit.e... |
Broad GNF2_FBL | View Gene Set | 6.615e-07 | 119 | 4.216e-06 | 67 | Neighborhood of FBL | www.broad.mit.e... |
Broad MORF_MSH2 | View Gene Set | 7.827e-07 | 52 | 4.915e-06 | 68 | Neighborhood of MSH2 | www.broad.mit.e... |
Broad GNF2_RAN | View Gene Set | 1.049e-06 | 78 | 6.489e-06 | 69 | Neighborhood of RAN | www.broad.mit.e... |
Broad MORF_CTBP1 | View Gene Set | 1.39e-06 | 149 | 8.48e-06 | 70 | Neighborhood of CTBP1 | www.broad.mit.e... |
Broad MORF_HAT1 | View Gene Set | 1.459e-06 | 155 | 8.777e-06 | 71 | Neighborhood of HAT1 | www.broad.mit.e... |
Broad GNF2_BUB1 | View Gene Set | 1.861e-06 | 25 | 1.104e-05 | 72 | Neighborhood of BUB1 | www.broad.mit.e... |
Broad MORF_RAF1 | View Gene Set | 2.114e-06 | 94 | 1.237e-05 | 73 | Neighborhood of RAF1 | www.broad.mit.e... |
Broad MORF_TERF1 | View Gene Set | 2.486e-06 | 57 | 1.435e-05 | 74 | Neighborhood of TERF1 | www.broad.mit.e... |
Broad GNF2_MSH2 | View Gene Set | 3.553e-06 | 26 | 2.023e-05 | 75 | Neighborhood of MSH2 | www.broad.mit.e... |
Broad MORF_FANCG | View Gene Set | 3.881e-06 | 148 | 2.18e-05 | 76 | Neighborhood of FANCG | www.broad.mit.e... |
Broad MORF_SMC1L1 | View Gene Set | 4.443e-06 | 47 | 2.464e-05 | 77 | Neighborhood of SMC1L1 | www.broad.mit.e... |
Broad MORF_SNRP70 | View Gene Set | 4.687e-06 | 50 | 2.563e-05 | 78 | Neighborhood of SNRP70 | www.broad.mit.e... |
Broad GNF2_XRCC5 | View Gene Set | 4.742e-06 | 61 | 2.563e-05 | 78 | Neighborhood of XRCC5 | www.broad.mit.e... |
Broad GNF2_RBBP6 | View Gene Set | 5.087e-06 | 54 | 2.715e-05 | 80 | Neighborhood of RBBP6 | www.broad.mit.e... |
Broad MORF_DAP3 | View Gene Set | 6.834e-06 | 175 | 3.602e-05 | 81 | Neighborhood of DAP3 | www.broad.mit.e... |
Broad GNF2_MLH1 | View Gene Set | 7.403e-06 | 36 | 3.855e-05 | 82 | Neighborhood of MLH1 | www.broad.mit.e... |
Broad MORF_CDK2 | View Gene Set | 7.666e-06 | 63 | 3.897e-05 | 83 | Neighborhood of CDK2 | www.broad.mit.e... |
Broad MORF_SART1 | View Gene Set | 7.661e-06 | 55 | 3.897e-05 | 83 | Neighborhood of SART1 | www.broad.mit.e... |
Broad MORF_MTA1 | View Gene Set | 8.173e-06 | 95 | 4.106e-05 | 85 | Neighborhood of MTA1 | www.broad.mit.e... |
Broad MORF_CCNI | View Gene Set | 8.784e-06 | 76 | 4.361e-05 | 86 | Neighborhood of CCNI | www.broad.mit.e... |
Broad MORF_FEN1 | View Gene Set | 1.301e-05 | 58 | 6.386e-05 | 87 | Neighborhood of FEN1 | www.broad.mit.e... |
Broad MORF_SS18 | View Gene Set | 1.464e-05 | 55 | 7.105e-05 | 88 | Neighborhood of SS18 | www.broad.mit.e... |
Broad MORF_RAN | View Gene Set | 1.91e-05 | 242 | 9.163e-05 | 89 | Neighborhood of RAN | www.broad.mit.e... |
Broad MORF_CCNF | View Gene Set | 1.996e-05 | 65 | 9.471e-05 | 90 | Neighborhood of CCNF | www.broad.mit.e... |
Broad GNF2_RPA1 | View Gene Set | 2.146e-05 | 20 | 0.0001007 | 91 | Neighborhood of RPA1 | www.broad.mit.e... |
Broad MORF_EI24 | View Gene Set | 2.214e-05 | 136 | 0.0001027 | 92 | Neighborhood of EI24 | www.broad.mit.e... |
Broad MORF_CUL1 | View Gene Set | 2.902e-05 | 62 | 0.0001333 | 93 | Neighborhood of CUL1 | www.broad.mit.e... |
Broad MORF_RAD21 | View Gene Set | 3.239e-05 | 157 | 0.0001471 | 94 | Neighborhood of RAD21 | www.broad.mit.e... |
Broad MORF_SP3 | View Gene Set | 3.471e-05 | 69 | 0.0001544 | 95 | Neighborhood of SP3 | www.broad.mit.e... |
Broad MORF_EIF3S6 | View Gene Set | 3.461e-05 | 108 | 0.0001544 | 95 | Neighborhood of EIF3S6 | www.broad.mit.e... |
Broad MORF_TERF2IP | View Gene Set | 3.714e-05 | 99 | 0.0001635 | 97 | Neighborhood of TERF2IP | www.broad.mit.e... |
Broad MORF_PPP2CA | View Gene Set | 3.763e-05 | 110 | 0.000164 | 98 | Neighborhood of PPP2CA | www.broad.mit.e... |
Broad MORF_UBE2N | View Gene Set | 3.822e-05 | 79 | 0.0001648 | 99 | Neighborhood of UBE2N | www.broad.mit.e... |
Broad MORF_ERH | View Gene Set | 4.676e-05 | 103 | 0.0001997 | 100 | Neighborhood of ERH | www.broad.mit.e... |
Broad MORF_PSMC1 | View Gene Set | 5.464e-05 | 162 | 0.000231 | 101 | Neighborhood of PSMC1 | www.broad.mit.e... |
Broad GNF2_BNIP2 | View Gene Set | 6.323e-05 | 31 | 0.0002647 | 102 | Neighborhood of BNIP2 | www.broad.mit.e... |
Broad MORF_EIF4A2 | View Gene Set | 7.459e-05 | 120 | 0.0003092 | 103 | Neighborhood of EIF4A2 | www.broad.mit.e... |
Broad MORF_UNG | View Gene Set | 8.045e-05 | 65 | 0.0003272 | 104 | Neighborhood of UNG | www.broad.mit.e... |
Broad MORF_SKP1A | View Gene Set | 8.009e-05 | 175 | 0.0003272 | 104 | Neighborhood of SKP1A | www.broad.mit.e... |
Broad GCM_MLL | View Gene Set | 8.125e-05 | 130 | 0.0003273 | 106 | Neighborhood of MLL | www.broad.mit.e... |
Broad MORF_BMI1 | View Gene Set | 8.404e-05 | 71 | 0.0003354 | 107 | Neighborhood of BMI1 | www.broad.mit.e... |
Broad GCM_DDX5 | View Gene Set | 0.0001247 | 52 | 0.0004929 | 108 | Neighborhood of DDX5 | www.broad.mit.e... |
Broad GCM_MAX | View Gene Set | 0.0001722 | 28 | 0.0006748 | 109 | Neighborhood of MAX | www.broad.mit.e... |
Broad MORF_MAP2K2 | View Gene Set | 0.0002301 | 123 | 0.0008933 | 110 | Neighborhood of MAP2K2 | www.broad.mit.e... |
Broad MORF_PPP1CA | View Gene Set | 0.000238 | 145 | 0.0009157 | 111 | Neighborhood of PPP1CA | www.broad.mit.e... |
Broad GCM_NF2 | View Gene Set | 0.0002545 | 235 | 0.0009704 | 112 | Neighborhood of NF2 | www.broad.mit.e... |
Broad GCM_ANP32B | View Gene Set | 0.0002755 | 32 | 0.001041 | 113 | Neighborhood of ANP32B | www.broad.mit.e... |
Broad MORF_GMPS | View Gene Set | 0.0002823 | 48 | 0.001048 | 114 | Neighborhood of GMPS | www.broad.mit.e... |
Broad GCM_DFFA | View Gene Set | 0.0002816 | 100 | 0.001048 | 114 | Neighborhood of DFFA | www.broad.mit.e... |
Broad MORF_NPM1 | View Gene Set | 0.0003268 | 152 | 0.001203 | 116 | Neighborhood of NPM1 | www.broad.mit.e... |
Broad MORF_AP3D1 | View Gene Set | 0.0003403 | 119 | 0.001242 | 117 | Neighborhood of AP3D1 | www.broad.mit.e... |
Broad MORF_RAC1 | View Gene Set | 0.0004263 | 196 | 0.001542 | 118 | Neighborhood of RAC1 | www.broad.mit.e... |
Broad GCM_APEX1 | View Gene Set | 0.0004871 | 102 | 0.001748 | 119 | Neighborhood of APEX1 | www.broad.mit.e... |
Broad MORF_REV3L | View Gene Set | 0.0005022 | 52 | 0.001787 | 120 | Neighborhood of REV3L | www.broad.mit.e... |
Broad MORF_USP5 | View Gene Set | 0.0005265 | 46 | 0.001858 | 121 | Neighborhood of USP5 | www.broad.mit.e... |
Broad GNF2_G22P1 | View Gene Set | 0.0005733 | 29 | 0.002007 | 122 | Neighborhood of G22P1 | www.broad.mit.e... |
Broad MORF_EIF4E | View Gene Set | 0.0006056 | 76 | 0.002102 | 123 | Neighborhood of EIF4E | www.broad.mit.e... |
Broad GCM_MYST2 | View Gene Set | 0.0006217 | 138 | 0.002141 | 124 | Neighborhood of MYST2 | www.broad.mit.e... |
Broad MORF_DEAF1 | View Gene Set | 0.000639 | 54 | 0.002183 | 125 | Neighborhood of DEAF1 | www.broad.mit.e... |
Broad GNF2_PPP6C | View Gene Set | 0.0007063 | 33 | 0.002394 | 126 | Neighborhood of PPP6C | www.broad.mit.e... |
Broad GNF2_NPM1 | View Gene Set | 0.0007127 | 57 | 0.002396 | 127 | Neighborhood of NPM1 | www.broad.mit.e... |
Broad MORF_RFC1 | View Gene Set | 0.0007288 | 98 | 0.002431 | 128 | Neighborhood of RFC1 | www.broad.mit.e... |
Broad MORF_CDC10 | View Gene Set | 0.0008065 | 120 | 0.00267 | 129 | Neighborhood of CDC10 | www.broad.mit.e... |
Broad GCM_NUMA1 | View Gene Set | 0.00104 | 45 | 0.003415 | 130 | Neighborhood of NUMA1 | www.broad.mit.e... |
Broad MORF_TPR | View Gene Set | 0.001059 | 131 | 0.003453 | 131 | Neighborhood of TPR | www.broad.mit.e... |
Broad GCM_GSPT1 | View Gene Set | 0.001104 | 129 | 0.003571 | 132 | Neighborhood of GSPT1 | www.broad.mit.e... |
Broad GCM_HBP1 | View Gene Set | 0.001116 | 54 | 0.003583 | 133 | Neighborhood of HBP1 | www.broad.mit.e... |
Broad GNF2_DAP3 | View Gene Set | 0.001212 | 98 | 0.003861 | 134 | Neighborhood of DAP3 | www.broad.mit.e... |
Broad MORF_HEAB | View Gene Set | 0.001277 | 71 | 0.004038 | 135 | Neighborhood of HEAB | www.broad.mit.e... |
Broad GCM_SMARCC1 | View Gene Set | 0.001405 | 33 | 0.004413 | 136 | Neighborhood of SMARCC1 | www.broad.mit.e... |
Broad MORF_AP2M1 | View Gene Set | 0.001574 | 197 | 0.004905 | 137 | Neighborhood of AP2M1 | www.broad.mit.e... |
Broad GNF2_NS | View Gene Set | 0.001658 | 35 | 0.005129 | 138 | Neighborhood of NS | www.broad.mit.e... |
Broad GCM_RAF1 | View Gene Set | 0.002333 | 34 | 0.007166 | 139 | Neighborhood of RAF1 | www.broad.mit.e... |
Broad MORF_GSPT1 | View Gene Set | 0.002771 | 41 | 0.008451 | 140 | Neighborhood of GSPT1 | www.broad.mit.e... |
Broad MORF_CSNK1D | View Gene Set | 0.003178 | 65 | 0.009626 | 141 | Neighborhood of CSNK1D | www.broad.mit.e... |
Broad MORF_RPA1 | View Gene Set | 0.003357 | 55 | 0.0101 | 142 | Neighborhood of RPA1 | www.broad.mit.e... |
Broad MORF_PPP5C | View Gene Set | 0.003391 | 81 | 0.01013 | 143 | Neighborhood of PPP5C | www.broad.mit.e... |
Broad MORF_IKBKG | View Gene Set | 0.003503 | 119 | 0.01039 | 144 | Neighborhood of IKBKG | www.broad.mit.e... |
Broad GCM_CHUK | View Gene Set | 0.003688 | 61 | 0.01086 | 145 | Neighborhood of CHUK | www.broad.mit.e... |
Broad GNF2_TYK2 | View Gene Set | 0.003754 | 31 | 0.01098 | 146 | Neighborhood of TYK2 | www.broad.mit.e... |
Broad GCM_PPP1CC | View Gene Set | 0.004275 | 47 | 0.01242 | 147 | Neighborhood of PPP1CC | www.broad.mit.e... |
Broad MORF_RAD23B | View Gene Set | 0.004356 | 159 | 0.01257 | 148 | Neighborhood of RAD23B | www.broad.mit.e... |
Broad GNF2_MSH6 | View Gene Set | 0.004457 | 30 | 0.01277 | 149 | Neighborhood of MSH6 | www.broad.mit.e... |
Broad GCM_CBFB | View Gene Set | 0.004822 | 59 | 0.01373 | 150 | Neighborhood of CBFB | www.broad.mit.e... |
Broad GNF2_DDX5 | View Gene Set | 0.005023 | 54 | 0.0142 | 151 | Neighborhood of DDX5 | www.broad.mit.e... |
Broad MORF_PTPN11 | View Gene Set | 0.005529 | 93 | 0.01553 | 152 | Neighborhood of PTPN11 | www.broad.mit.e... |
Broad GCM_HDAC1 | View Gene Set | 0.005699 | 30 | 0.0159 | 153 | Neighborhood of HDAC1 | www.broad.mit.e... |
Broad GCM_RAD21 | View Gene Set | 0.006769 | 30 | 0.01877 | 154 | Neighborhood of RAD21 | www.broad.mit.e... |
Broad GCM_AIP | View Gene Set | 0.007082 | 36 | 0.01951 | 155 | Neighborhood of AIP | www.broad.mit.e... |
Broad GCM_DPF2 | View Gene Set | 0.007146 | 32 | 0.01956 | 156 | Neighborhood of DPF2 | www.broad.mit.e... |
Broad MORF_NME2 | View Gene Set | 0.007485 | 145 | 0.02023 | 157 | Neighborhood of NME2 | www.broad.mit.e... |
Broad MORF_PRKAR1A | View Gene Set | 0.007443 | 133 | 0.02023 | 157 | Neighborhood of PRKAR1A | www.broad.mit.e... |
Broad MORF_PRDX3 | View Gene Set | 0.007713 | 79 | 0.02071 | 159 | Neighborhood of PRDX3 | www.broad.mit.e... |
Broad GNF2_CBFB | View Gene Set | 0.007859 | 26 | 0.02097 | 160 | Neighborhood of CBFB | www.broad.mit.e... |
Broad GCM_BECN1 | View Gene Set | 0.008889 | 59 | 0.02357 | 161 | Neighborhood of BECN1 | www.broad.mit.e... |
Broad GCM_UBE2N | View Gene Set | 0.008972 | 125 | 0.02365 | 162 | Neighborhood of UBE2N | www.broad.mit.e... |
Broad MORF_ORC1L | View Gene Set | 0.0101 | 61 | 0.02647 | 163 | Neighborhood of ORC1L | www.broad.mit.e... |
Broad MORF_BAG5 | View Gene Set | 0.01025 | 48 | 0.0267 | 164 | Neighborhood of BAG5 | www.broad.mit.e... |
Broad MORF_ACTG1 | View Gene Set | 0.01083 | 134 | 0.02803 | 165 | Neighborhood of ACTG1 | www.broad.mit.e... |
Broad GCM_VAV1 | View Gene Set | 0.01108 | 46 | 0.02849 | 166 | Neighborhood of VAV1 | www.broad.mit.e... |
Broad GCM_CSNK1A1 | View Gene Set | 0.01136 | 28 | 0.02905 | 167 | Neighborhood of CSNK1A1 | www.broad.mit.e... |
Broad MORF_BECN1 | View Gene Set | 0.01268 | 93 | 0.03222 | 168 | Neighborhood of BECN1 | www.broad.mit.e... |
Broad MORF_RAB1A | View Gene Set | 0.0131 | 179 | 0.03309 | 169 | Neighborhood of RAB1A | www.broad.mit.e... |
Broad GNF2_PAK2 | View Gene Set | 0.01339 | 27 | 0.03363 | 170 | Neighborhood of PAK2 | www.broad.mit.e... |
Broad GCM_TINF2 | View Gene Set | 0.01354 | 33 | 0.03381 | 171 | Neighborhood of TINF2 | www.broad.mit.e... |
Broad MORF_PSMC2 | View Gene Set | 0.01435 | 100 | 0.03563 | 172 | Neighborhood of PSMC2 | www.broad.mit.e... |
Broad GCM_RBM8A | View Gene Set | 0.01445 | 64 | 0.03566 | 173 | Neighborhood of RBM8A | www.broad.mit.e... |
Broad GCM_PFN1 | View Gene Set | 0.01562 | 47 | 0.03833 | 174 | Neighborhood of PFN1 | www.broad.mit.e... |
Broad GNF2_SMC1L1 | View Gene Set | 0.01659 | 24 | 0.04049 | 175 | Neighborhood of SMC1L1 | www.broad.mit.e... |
Broad GCM_ACTG1 | View Gene Set | 0.01681 | 113 | 0.04077 | 176 | Neighborhood of ACTG1 | www.broad.mit.e... |
Broad MORF_PAPSS1 | View Gene Set | 0.017 | 98 | 0.04102 | 177 | Neighborhood of PAPSS1 | www.broad.mit.e... |
Broad GCM_GSTA4 | View Gene Set | 0.01815 | 57 | 0.04354 | 178 | Neighborhood of GSTA4 | www.broad.mit.e... |
Broad GNF2_BUB3 | View Gene Set | 0.01963 | 22 | 0.04684 | 179 | Neighborhood of BUB3 | www.broad.mit.e... |
Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
Broad module_252 | View Gene Set | 1.065e-12 | 224 | 4.837e-10 | 1 | Genes in module_252 | www.broad.mit.e... |
Broad module_198 | View Gene Set | 3.313e-12 | 288 | 7.519e-10 | 2 | Genes in module_198 | www.broad.mit.e... |
Broad module_98 | View Gene Set | 6.939e-11 | 375 | 1.05e-08 | 3 | Genes in module_98 | www.broad.mit.e... |
Broad module_183 | View Gene Set | 3.428e-08 | 52 | 3.89e-06 | 4 | Genes in module_183 | www.broad.mit.e... |
Broad module_54 | View Gene Set | 3.447e-07 | 242 | 3.13e-05 | 5 | Genes in module_54 | www.broad.mit.e... |
Broad module_57 | View Gene Set | 2.459e-05 | 54 | 0.001595 | 6 | Genes in module_57 | www.broad.mit.e... |
Broad module_397 | View Gene Set | 2.322e-05 | 114 | 0.001595 | 6 | Genes in module_397 | www.broad.mit.e... |
Broad module_403 | View Gene Set | 4.451e-05 | 44 | 0.002526 | 8 | Genes in module_403 | www.broad.mit.e... |
Broad module_352 | View Gene Set | 0.0001166 | 17 | 0.00588 | 9 | Genes in module_352 | www.broad.mit.e... |
Broad module_197 | View Gene Set | 0.0001841 | 170 | 0.008359 | 10 | Genes in module_197 | www.broad.mit.e... |
Broad module_451 | View Gene Set | 0.0002566 | 29 | 0.01059 | 11 | Genes in module_451 | www.broad.mit.e... |
Broad module_17 | View Gene Set | 0.0003298 | 351 | 0.01248 | 12 | Genes in module_17 | www.broad.mit.e... |
Broad module_8 | View Gene Set | 0.001095 | 403 | 0.03825 | 13 | Genes in module_8 | www.broad.mit.e... |
Broad module_245 | View Gene Set | 0.001363 | 26 | 0.04419 | 14 | Genes in module_245 | www.broad.mit.e... |
Broad module_320 | View Gene Set | 0.001569 | 19 | 0.04451 | 15 | Genes in module_320 | www.broad.mit.e... |
Broad module_337 | View Gene Set | 0.001543 | 59 | 0.04451 | 15 | Genes in module_337 | www.broad.mit.e... |
Broad module_32 | View Gene Set | 0.00177 | 227 | 0.046 | 17 | Genes in module_32 | www.broad.mit.e... |
Broad module_158 | View Gene Set | 0.001824 | 41 | 0.046 | 17 | Genes in module_158 | www.broad.mit.e... |
Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
Broad NUCLEOBASENUCLEOSIDENUCLEOTIDE_AND_NUCLEIC_ACID_METABOLIC_PROCESS | View Gene Set | 3.157e-16 | 1197 | 2.604e-13 | 1 | Genes annotated by the GO term GO:0006139. The chemical reactions and pathways involving nucleobases nucleosides nucleotides and nucleic acids. | www.broad.mit.e... |
Broad RNA_METABOLIC_PROCESS | View Gene Set | 2.369e-14 | 801 | 9.774e-12 | 2 | Genes annotated by the GO term GO:0016070. The chemical reactions and pathways involving RNA ribonucleic acid one of the two main type of nucleic acid consisting of a long unbranched macromolecule formed from ribonucleotides joined in 3' 5'-phosphodiester linkage. | www.broad.mit.e... |
Broad M_PHASE_OF_MITOTIC_CELL_CYCLE | View Gene Set | 5.195e-11 | 83 | 1.429e-08 | 3 | Genes annotated by the GO term GO:0000087. Progression through M phase the part of the mitotic cell cycle during which mitosis takes place. | www.broad.mit.e... |
Broad CELL_CYCLE_PROCESS | View Gene Set | 9.515e-11 | 187 | 1.963e-08 | 4 | Genes annotated by the GO term GO:0022402. A cellular process that is involved in the progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. | www.broad.mit.e... |
Broad CHROMOSOME_ORGANIZATION_AND_BIOGENESIS | View Gene Set | 1.558e-10 | 117 | 2.571e-08 | 5 | Genes annotated by the GO term GO:0051276. A process that is carried out at the cellular level that results in the formation arrangement of constituent parts or disassembly of chromosomes structures composed of a very long molecule of DNA and associated proteins that carries hereditary information. | www.broad.mit.e... |
Broad M_PHASE | View Gene Set | 1.923e-10 | 111 | 2.645e-08 | 6 | Genes annotated by the GO term GO:0000279. Progression through M phase the part of the cell cycle comprising nuclear division. | www.broad.mit.e... |
Broad MITOSIS | View Gene Set | 2.575e-10 | 81 | 3.035e-08 | 7 | Genes annotated by the GO term GO:0007067. Progression through mitosis the division of the eukaryotic cell nucleus to produce two daughter nuclei that usually contain the identical chromosome complement to their mother. | www.broad.mit.e... |
Broad MITOTIC_CELL_CYCLE | View Gene Set | 1.109e-09 | 148 | 1.144e-07 | 8 | Genes annotated by the GO term GO:0000278. Progression through the phases of the mitotic cell cycle the most common eukaryotic cell cycle which canonically comprises four successive phases called G1 S G2 and M and includes replication of the genome and the subsequent segregation of chromosomes into daughter cells. In some variant cell cycles nuclear replication or nuclear division may not be followed by cell division or G1 and G2 phases may be absent. | www.broad.mit.e... |
Broad BIOPOLYMER_METABOLIC_PROCESS | View Gene Set | 3.297e-09 | 1623 | 2.896e-07 | 9 | Genes annotated by the GO term GO:0043283. The chemical reactions and pathways involving biopolymers long repeating chains of monomers found in nature e.g. polysaccharides and proteins. | www.broad.mit.e... |
Broad CELL_CYCLE_PHASE | View Gene Set | 3.51e-09 | 167 | 2.896e-07 | 9 | Genes annotated by the GO term GO:0022403. A cell cycle process comprising the steps by which a cell progresses through one of the biochemical and morphological phases and events that occur during successive cell replication or nuclear replication events. | www.broad.mit.e... |
Broad RNA_PROCESSING | View Gene Set | 1.44e-08 | 147 | 1.08e-06 | 11 | Genes annotated by the GO term GO:0006396. Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules. | www.broad.mit.e... |
Broad TRANSCRIPTION | View Gene Set | 2.689e-08 | 738 | 1.849e-06 | 12 | Genes annotated by the GO term GO:0006350. The synthesis of either RNA on a template of DNA or DNA on a template of RNA. | www.broad.mit.e... |
Broad REGULATION_OF_GENE_EXPRESSION | View Gene Set | 4.251e-08 | 660 | 2.698e-06 | 13 | Genes annotated by the GO term GO:0010468. Any process that modulates the frequency rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form. | www.broad.mit.e... |
Broad RNA_SPLICING | View Gene Set | 8.475e-08 | 73 | 4.994e-06 | 14 | Genes annotated by the GO term GO:0008380. The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA. | www.broad.mit.e... |
Broad TRANSCRIPTION_DNA_DEPENDENT | View Gene Set | 1.303e-07 | 623 | 7.145e-06 | 15 | Genes annotated by the GO term GO:0006351. The synthesis of RNA on a template of DNA. | www.broad.mit.e... |
Broad RNA_BIOSYNTHETIC_PROCESS | View Gene Set | 1.386e-07 | 625 | 7.145e-06 | 15 | Genes annotated by the GO term GO:0032774. The chemical reactions and pathways resulting in the formation of RNA ribonucleic acid one of the two main type of nucleic acid consisting of a long unbranched macromolecule formed from ribonucleotides joined in 3' 5'-phosphodiester linkage. Includes polymerization of ribonucleotide monomers. | www.broad.mit.e... |
Broad REGULATION_OF_TRANSCRIPTION | View Gene Set | 1.509e-07 | 555 | 7.321e-06 | 17 | Genes annotated by the GO term GO:0045449. Any process that modulates the frequency rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA. | www.broad.mit.e... |
Broad REGULATION_OF_NUCLEOBASENUCLEOSIDENUCLEOTIDE_AND_NUCLEIC_ACID_METABOLIC_PROCESS | View Gene Set | 3.934e-07 | 601 | 1.803e-05 | 18 | Genes annotated by the GO term GO:0019219. Any process that modulates the frequency rate or extent of the chemical reactions and pathways involving nucleobases nucleosides nucleotides and nucleic acids. | www.broad.mit.e... |
Broad ESTABLISHMENT_AND_OR_MAINTENANCE_OF_CHROMATIN_ARCHITECTURE | View Gene Set | 5.581e-07 | 72 | 2.423e-05 | 19 | Genes annotated by the GO term GO:0006325. The specification formation and maintenance of the physical structure of eukaryotic chromatin. | www.broad.mit.e... |
Broad REGULATION_OF_TRANSCRIPTIONDNA_DEPENDENT | View Gene Set | 8.684e-07 | 452 | 3.455e-05 | 20 | Genes annotated by the GO term GO:0006355. Any process that modulates the frequency rate or extent of DNA-dependent transcription. | www.broad.mit.e... |
Broad REGULATION_OF_RNA_METABOLIC_PROCESS | View Gene Set | 8.795e-07 | 457 | 3.455e-05 | 20 | Genes annotated by the GO term GO:0051252. Any process that modulates the frequency rate or extent of the chemical reactions and pathways involving RNA. | www.broad.mit.e... |
Broad CELL_CYCLE_GO_0007049 | View Gene Set | 2.042e-06 | 304 | 7.657e-05 | 22 | Genes annotated by the GO term GO:0007049. The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division. | www.broad.mit.e... |
Broad SISTER_CHROMATID_SEGREGATION | View Gene Set | 2.685e-06 | 17 | 9.63e-05 | 23 | Genes annotated by the GO term GO:0000819. The process by which sister chromatids are organized and then physically separated and apportioned to two or more sets. | www.broad.mit.e... |
Broad DNA_METABOLIC_PROCESS | View Gene Set | 2.887e-06 | 253 | 9.925e-05 | 24 | Genes annotated by the GO term GO:0006259. The chemical reactions and pathways involving DNA deoxyribonucleic acid one of the two main types of nucleic acid consisting of a long unbranched macromolecule formed from one or more commonly two strands of linked deoxyribonucleotides. | www.broad.mit.e... |
Broad NEGATIVE_REGULATION_OF_TRANSCRIPTION | View Gene Set | 4.084e-06 | 185 | 0.0001348 | 25 | Genes annotated by the GO term GO:0016481. Any process that stops prevents or reduces the frequency rate or extent of transcription. | www.broad.mit.e... |
Broad MITOTIC_SISTER_CHROMATID_SEGREGATION | View Gene Set | 4.311e-06 | 16 | 0.0001368 | 26 | Genes annotated by the GO term GO:0000070. The cell cycle process whereby replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the mitotic cell cycle. Each replicated chromosome composed of two sister chromatids aligns at the cell equator paired with its homologous partner. One homolog of each morphologic type goes into each of the resulting chromosome sets. | www.broad.mit.e... |
Broad NEGATIVE_REGULATION_OF_TRANSCRIPTION_DNA_DEPENDENT | View Gene Set | 5.166e-06 | 127 | 0.0001522 | 27 | Genes annotated by the GO term GO:0045892. Any process that stops prevents or reduces the frequency rate or extent of DNA-dependent transcription. | www.broad.mit.e... |
Broad NEGATIVE_REGULATION_OF_RNA_METABOLIC_PROCESS | View Gene Set | 5.166e-06 | 127 | 0.0001522 | 27 | Genes annotated by the GO term GO:0051253. Any process that stops prevents or reduces the frequency rate or extent of the chemical reactions and pathways involving RNA. | www.broad.mit.e... |
Broad TRANSCRIPTION_FROM_RNA_POLYMERASE_II_PROMOTER | View Gene Set | 6.511e-06 | 449 | 0.0001852 | 29 | Genes annotated by the GO term GO:0006366. The synthesis of RNA from a DNA template by RNA polymerase II (Pol II) originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs). | www.broad.mit.e... |
Broad REGULATION_OF_CELLULAR_METABOLIC_PROCESS | View Gene Set | 1.556e-05 | 767 | 0.0004279 | 30 | Genes annotated by the GO term GO:0031323. Any process that modulates the frequency rate or extent of the chemical reactions and pathways by which individual cells transform chemical substances. | www.broad.mit.e... |
Broad REGULATION_OF_METABOLIC_PROCESS | View Gene Set | 1.867e-05 | 779 | 0.0004969 | 31 | Genes annotated by the GO term GO:0019222. Any process that modulates the frequency rate or extent of the chemical reactions and pathways within a cell or an organism. | www.broad.mit.e... |
Broad NEGATIVE_REGULATION_OF_NUCLEOBASENUCLEOSIDENUCLEOTIDE_AND_NUCLEIC_ACID_METABOLIC_PROCESS | View Gene Set | 3.617e-05 | 205 | 0.0009325 | 32 | Genes annotated by the GO term GO:0045934. Any process that stops prevents or reduces the frequency rate or extent of the chemical reactions and pathways involving nucleobases nucleosides nucleotides and nucleic acids. | www.broad.mit.e... |
Broad REGULATION_OF_TRANSCRIPTION_FROM_RNA_POLYMERASE_II_PROMOTER | View Gene Set | 4.595e-05 | 285 | 0.001149 | 33 | Genes annotated by the GO term GO:0006357. Any process that modulates the frequency rate or extent of transcription from an RNA polymerase II promoter. | www.broad.mit.e... |
Broad CHROMOSOME_SEGREGATION | View Gene Set | 8.464e-05 | 31 | 0.002054 | 34 | Genes annotated by the GO term GO:0007059. The process by which genetic material in the form of chromosomes is organized and then physically separated and apportioned to two or more sets. | www.broad.mit.e... |
Broad CHROMATIN_ASSEMBLY_OR_DISASSEMBLY | View Gene Set | 0.0001067 | 26 | 0.002515 | 35 | Genes annotated by the GO term GO:0006333. The formation or destruction of chromatin structures. | www.broad.mit.e... |
Broad MITOTIC_SPINDLE_ORGANIZATION_AND_BIOGENESIS | View Gene Set | 0.000118 | 9 | 0.002705 | 36 | Genes annotated by the GO term GO:0007052. A process that is carried out at the cellular level which results in the formation arrangement of constituent parts or disassembly of the microtubule spindle during a mitotic cell cycle. | www.broad.mit.e... |
Broad NEGATIVE_REGULATION_OF_TRANSCRIPTION_FROM_RNA_POLYMERASE_II_PROMOTER | View Gene Set | 0.0001234 | 83 | 0.002752 | 37 | Genes annotated by the GO term GO:0000122. Any process that stops prevents or reduces the frequency rate or extent of transcription from an RNA polymerase II promoter. | www.broad.mit.e... |
Broad S_PHASE | View Gene Set | 0.0001708 | 14 | 0.003709 | 38 | Genes annotated by the GO term GO:0051320. Progression through S phase the part of the cell cycle during which DNA synthesis takes place. | www.broad.mit.e... |
Broad PROTEIN_DNA_COMPLEX_ASSEMBLY | View Gene Set | 0.0001835 | 48 | 0.003881 | 39 | Genes annotated by the GO term GO:0065004. The aggregation arrangement and bonding together of proteins and DNA molecules to form a protein-DNA complex. | www.broad.mit.e... |
Broad MRNA_SPLICE_SITE_SELECTION | View Gene Set | 0.0002356 | 6 | 0.004859 | 40 | Genes annotated by the GO term GO:0006376. Selection of a splice site by components of the assembling spliceosome. | www.broad.mit.e... |
Broad CHROMATIN_MODIFICATION | View Gene Set | 0.000295 | 50 | 0.005936 | 41 | Genes annotated by the GO term GO:0016568. The alteration of DNA or protein in chromatin which may result in changing the chromatin structure. | www.broad.mit.e... |
Broad RIBONUCLEOPROTEIN_COMPLEX_BIOGENESIS_AND_ASSEMBLY | View Gene Set | 0.0003141 | 74 | 0.00617 | 42 | Genes annotated by the GO term GO:0022613. The cellular process by which a complex containing RNA and proteins is synthesized aggregates and bonds together. | www.broad.mit.e... |
Broad CHROMATIN_REMODELING | View Gene Set | 0.0003934 | 23 | 0.007548 | 43 | Genes annotated by the GO term GO:0006338. Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation. | www.broad.mit.e... |
Broad PROTEIN_RNA_COMPLEX_ASSEMBLY | View Gene Set | 0.0004897 | 59 | 0.008979 | 44 | Genes annotated by the GO term GO:0022618. The aggregation arrangement and bonding together of proteins and RNA molecules to form a ribonucleoprotein complex. | www.broad.mit.e... |
Broad SPINDLE_ORGANIZATION_AND_BIOGENESIS | View Gene Set | 0.0004856 | 10 | 0.008979 | 44 | Genes annotated by the GO term GO:0007051. A process that is carried out at the cellular level which results in the formation arrangement of constituent parts or disassembly of the spindle the array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during DNA segregation and serves to move the duplicated chromosomes apart. | www.broad.mit.e... |
Broad STEROID_HORMONE_RECEPTOR_SIGNALING_PATHWAY | View Gene Set | 0.0008581 | 20 | 0.01506 | 46 | Genes annotated by the GO term GO:0030518. Any series of molecular signals generated as a consequence of a steroid hormone binding to its receptor. | www.broad.mit.e... |
Broad INTRACELLULAR_RECEPTOR_MEDIATED_SIGNALING_PATHWAY | View Gene Set | 0.0008581 | 21 | 0.01506 | 46 | Genes annotated by the GO term GO:0030522. Any series of molecular signals initiated by a ligand entering the target cell where it binds to an intracellular receptor. | www.broad.mit.e... |
Broad REGULATION_OF_MITOSIS | View Gene Set | 0.001016 | 40 | 0.01746 | 48 | Genes annotated by the GO term GO:0007088. Any process that modulates the frequency rate or extent of mitosis. | www.broad.mit.e... |
Broad ANDROGEN_RECEPTOR_SIGNALING_PATHWAY | View Gene Set | 0.001073 | 12 | 0.0178 | 49 | Genes annotated by the GO term GO:0030521. Any series of molecular signals generated as a consequence of an androgen binding to its receptor. | www.broad.mit.e... |
Broad POSITIVE_REGULATION_OF_TRANSCRIPTION | View Gene Set | 0.001079 | 139 | 0.0178 | 49 | Genes annotated by the GO term GO:0045941. Any process that activates or increases the frequency rate or extent of transcription. | www.broad.mit.e... |
Broad REGULATION_OF_GENE_EXPRESSION_EPIGENETIC | View Gene Set | 0.001296 | 30 | 0.02097 | 51 | Genes annotated by the GO term GO:0040029. Any process that modulates the frequency rate or extent of gene expression; the process is mitotically or meiotically heritable or is stably self-propagated in the cytoplasm of a resting cell and does not entail a change in DNA sequence. | www.broad.mit.e... |
Broad MACROMOLECULAR_COMPLEX_ASSEMBLY | View Gene Set | 0.001374 | 271 | 0.0218 | 52 | Genes annotated by the GO term GO:0065003. The aggregation arrangement and bonding together of a set of macromolecules to form a complex. | www.broad.mit.e... |
Broad NEGATIVE_REGULATION_OF_METABOLIC_PROCESS | View Gene Set | 0.001434 | 255 | 0.02232 | 53 | Genes annotated by the GO term GO:0009892. Any process that stops prevents or reduces the frequency rate or extent of the chemical reactions and pathways within a cell or an organism. | www.broad.mit.e... |
Broad DNA_PACKAGING | View Gene Set | 0.001463 | 34 | 0.02235 | 54 | Genes annotated by the GO term GO:0006323. Any process by which DNA and associated proteins are formed into a compact orderly structure. | www.broad.mit.e... |
Broad NEGATIVE_REGULATION_OF_CELLULAR_METABOLIC_PROCESS | View Gene Set | 0.001553 | 252 | 0.02329 | 55 | Genes annotated by the GO term GO:0031324. Any process that stops prevents or reduces the frequency rate or extent of the chemical reactions and pathways by which individual cells transform chemical substances. | www.broad.mit.e... |
Broad TRANSCRIPTION_INITIATION_FROM_RNA_POLYMERASE_II_PROMOTER | View Gene Set | 0.002331 | 29 | 0.03434 | 56 | Genes annotated by the GO term GO:0006367. Processes involved in starting transcription from the RNA polymerase II promoter. | www.broad.mit.e... |
Broad TRANSCRIPTION_INITIATION | View Gene Set | 0.002593 | 35 | 0.03688 | 57 | Genes annotated by the GO term GO:0006352. Processes involved in the assembly of the RNA polymerase complex at the promoter region of a DNA template resulting in the subsequent synthesis of RNA from that promoter. | www.broad.mit.e... |
Broad CHROMOSOME_CONDENSATION | View Gene Set | 0.002565 | 10 | 0.03688 | 57 | Genes annotated by the GO term GO:0030261. The progressive compaction of dispersed interphase chromatin into threadlike chromosomes prior to mitotic or meiotic nuclear division or during apoptosis in eukaryotic cells. | www.broad.mit.e... |
Broad CELLULAR_COMPONENT_ASSEMBLY | View Gene Set | 0.003398 | 288 | 0.04752 | 59 | Genes annotated by the GO term GO:0022607. A cellular process that results in the assembly of a part of the cell. | www.broad.mit.e... |
Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
Broad NUCLEUS | View Gene Set | 2.938e-23 | 1353 | 6.845e-21 | 1 | Genes annotated by the GO term GO:0005634. A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells the nucleus contains all of the cell's chromosomes except the organellar chromosomes and is the site of RNA synthesis and processing. In some species or in specialized cell types RNA metabolism or DNA replication may be absent. | www.broad.mit.e... |
Broad NUCLEAR_PART | View Gene Set | 1.987e-18 | 543 | 2.315e-16 | 2 | Genes annotated by the GO term GO:0044428. Any constituent part of the nucleus a membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. | www.broad.mit.e... |
Broad NUCLEAR_LUMEN | View Gene Set | 3.126e-10 | 365 | 2.428e-08 | 3 | Genes annotated by the GO term GO:0031981. The volume enclosed by the nuclear inner membrane. | www.broad.mit.e... |
Broad INTRACELLULAR_ORGANELLE_PART | View Gene Set | 2.235e-09 | 1144 | 1.302e-07 | 4 | Genes annotated by the GO term GO:0044446. A constituent part of an intracellular organelle an organized structure of distinctive morphology and function occurring within the cell. Includes constituent parts of the nucleus mitochondria plastids vacuoles vesicles ribosomes and the cytoskeleton but excludes the plasma membrane. | www.broad.mit.e... |
Broad ORGANELLE_PART | View Gene Set | 5.18e-09 | 1149 | 2.414e-07 | 5 | Genes annotated by the GO term GO:0044422. Any constituent part of an organelle an organized structure of distinctive morphology and function. Includes constituent parts of the nucleus mitochondria plastids vacuoles vesicles ribosomes and the cytoskeleton but excludes the plasma membrane. | www.broad.mit.e... |
Broad ORGANELLE_LUMEN | View Gene Set | 7.375e-09 | 434 | 2.455e-07 | 6 | Genes annotated by the GO term GO:0043233. The volume enclosed by the membranes of a particular organelle e.g. endoplasmic reticulum lumen or the space between the two lipid bilayers of a double membrane surrounding an organelle e.g. nuclear membrane lumen. | www.broad.mit.e... |
Broad MEMBRANE_ENCLOSED_LUMEN | View Gene Set | 7.375e-09 | 434 | 2.455e-07 | 6 | Genes annotated by the GO term GO:0031974. The enclosed volume within a sealed membrane or between two sealed membranes. | www.broad.mit.e... |
Broad NUCLEOPLASM | View Gene Set | 1.786e-08 | 266 | 4.623e-07 | 8 | Genes annotated by the GO term GO:0005654. That part of the nuclear content other than the chromosomes or the nucleolus. | www.broad.mit.e... |
Broad RIBONUCLEOPROTEIN_COMPLEX | View Gene Set | 1.786e-08 | 129 | 4.623e-07 | 8 | Genes annotated by the GO term GO:0030529. A macromolecular complex containing both protein and RNA molecules. | www.broad.mit.e... |
Broad MACROMOLECULAR_COMPLEX | View Gene Set | 2.109e-08 | 914 | 4.624e-07 | 10 | Genes annotated by the GO term GO:0032991. A stable assembly of two or more macromolecules i.e. proteins nucleic acids carbohydrates or lipids in which the constituent parts function together. | www.broad.mit.e... |
Broad CHROMOSOME | View Gene Set | 2.183e-08 | 122 | 4.624e-07 | 10 | Genes annotated by the GO term GO:0005694. A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information. | www.broad.mit.e... |
Broad CHROMOSOMAL_PART | View Gene Set | 2.568e-08 | 95 | 4.987e-07 | 12 | Genes annotated by the GO term GO:0044427. Any constituent part of a chromosome a structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information. | www.broad.mit.e... |
Broad CHROMOSOMEPERICENTRIC_REGION | View Gene Set | 1.239e-06 | 31 | 2.22e-05 | 13 | Genes annotated by the GO term GO:0000775. The central region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes this region corresponds to a single area of the chromosome whereas in holocentric chromosomes it is evenly distributed along the chromosome. | www.broad.mit.e... |
Broad CHROMATIN | View Gene Set | 5.563e-06 | 35 | 9.259e-05 | 14 | Genes annotated by the GO term GO:0000785. The ordered and organized complex of DNA and protein that forms the chromosome. | www.broad.mit.e... |
Broad KINETOCHORE | View Gene Set | 6.92e-06 | 25 | 0.0001075 | 15 | Genes annotated by the GO term GO:0000776. A multisubunit complex that is located at the pericentric region of DNA and provides an attachment point for the spindle microtubules. | www.broad.mit.e... |
Broad NUCLEOPLASM_PART | View Gene Set | 2.544e-05 | 202 | 0.0003704 | 16 | Genes annotated by the GO term GO:0044451. Any constituent part of the nucleoplasm that part of the nuclear content other than the chromosomes or the nucleolus. | www.broad.mit.e... |
Broad NUCLEOLUS | View Gene Set | 5.161e-05 | 116 | 0.0007073 | 17 | Genes annotated by the GO term GO:0005730. A small dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein is not bounded by a limiting membrane and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA the processing of this RNA into 5.8S 18S and 28S components of ribosomal RNA and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome. | www.broad.mit.e... |
Broad PROTEIN_COMPLEX | View Gene Set | 6.801e-05 | 799 | 0.0008804 | 18 | Genes annotated by the GO term GO:0043234. Any protein group composed of two or more subunits which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups such as nucleic acids metal ions or carbohydrate groups. | www.broad.mit.e... |
Broad SPINDLE_MICROTUBULE | View Gene Set | 7.885e-05 | 15 | 0.0009669 | 19 | Genes annotated by the GO term GO:0005876. Any microtubule that is part of a mitotic or meiotic spindle; anchored at one spindle pole. | www.broad.mit.e... |
Broad SMALL_NUCLEAR_RIBONUCLEOPROTEIN_COMPLEX | View Gene Set | 0.0002233 | 20 | 0.002601 | 20 | Genes annotated by the GO term GO:0030532. A complex composed of RNA of the small nuclear RNA (snRNA) class and protein found in the nucleus of a eukaryotic cell. These are typically named after the snRNA(s) they contain e.g. U1 snRNP or U4/U6 snRNP. Many but not all of these complexes are involved in splicing of nuclear mRNAs. | www.broad.mit.e... |
Broad CHROMATIN_REMODELING_COMPLEX | View Gene Set | 0.000317 | 17 | 0.003455 | 21 | Genes annotated by the GO term GO:0016585. Any complex that mediates dynamic changes in eukaryotic chromatin. | www.broad.mit.e... |
Broad SPINDLE | View Gene Set | 0.0003263 | 37 | 0.003455 | 21 | Genes annotated by the GO term GO:0005819. The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart. | www.broad.mit.e... |
Broad SPLICEOSOME | View Gene Set | 0.0004779 | 44 | 0.004841 | 23 | Genes annotated by the GO term GO:0005681. A ribonucleoprotein complex containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron. | www.broad.mit.e... |
Broad NUCLEAR_CHROMOSOME | View Gene Set | 0.0006892 | 53 | 0.006691 | 24 | Genes annotated by the GO term GO:0000228. A chromosome found in the nucleus of a eukaryotic cell. | www.broad.mit.e... |
Broad CENTROSOME | View Gene Set | 0.0007621 | 55 | 0.007103 | 25 | Genes annotated by the GO term GO:0005813. A structure comprised of a core structure (in most organisms a pair of centrioles) and peripheral material from which a microtubule-based structure such as a spindle apparatus is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells though in animal cells it changes continually during the cell-division cycle. | www.broad.mit.e... |
Broad NON_MEMBRANE_BOUND_ORGANELLE | View Gene Set | 0.0008239 | 613 | 0.00711 | 26 | Genes annotated by the GO term GO:0043228. Organized structure of distinctive morphology and function not bounded by a lipid bilayer membrane. Includes ribosomes the cytoskeleton and chromosomes. | www.broad.mit.e... |
Broad INTRACELLULAR_NON_MEMBRANE_BOUND_ORGANELLE | View Gene Set | 0.0008239 | 613 | 0.00711 | 26 | Genes annotated by the GO term GO:0043232. Organized structure of distinctive morphology and function not bounded by a lipid bilayer membrane and occurring within the cell. Includes ribosomes the cytoskeleton and chromosomes. | www.broad.mit.e... |
Broad NUCLEAR_CHROMATIN | View Gene Set | 0.001064 | 14 | 0.00885 | 28 | Genes annotated by the GO term GO:0000790. The ordered and organized complex of DNA and protein that forms the chromosome in the nucleus. | www.broad.mit.e... |
Broad ENVELOPE | View Gene Set | 0.001488 | 165 | 0.01155 | 29 | Genes annotated by the GO term GO:0031975. A multilayered structure surrounding all or part of a cell; encompasses one or more lipid bilayers and may include a cell wall layer also includes the space between layers. | www.broad.mit.e... |
Broad ORGANELLE_ENVELOPE | View Gene Set | 0.001488 | 165 | 0.01155 | 29 | Genes annotated by the GO term GO:0031967. A double membrane structure enclosing an organelle including two lipid bilayers and the region between them. In some cases an organelle envelope may have more than two membranes. | www.broad.mit.e... |
Broad PROTEASOME_COMPLEX | View Gene Set | 0.001719 | 23 | 0.01292 | 31 | Genes annotated by the GO term GO:0000502. A large multisubunit complex which catalyzes protein degradation. This complex consists of the barrel shaped proteasome core complex and one or two associated proteins or complexes that act in regulating entry into or exit from the core. | www.broad.mit.e... |
Broad CONDENSED_CHROMOSOME | View Gene Set | 0.001903 | 32 | 0.01385 | 32 | Genes annotated by the GO term GO:0000793. A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure. | www.broad.mit.e... |
Broad NUCLEAR_PORE | View Gene Set | 0.002119 | 29 | 0.01496 | 33 | Genes annotated by the GO term GO:0005643. Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell where the inner and outer nuclear membranes are joined. | www.broad.mit.e... |
Broad MICROTUBULE_ORGANIZING_CENTER | View Gene Set | 0.002712 | 64 | 0.01859 | 34 | Genes annotated by the GO term GO:0005815. A region in a eukaryotic cell such as a centrosome or basal body from which microtubules grow. | www.broad.mit.e... |
Broad NUCLEAR_ENVELOPE | View Gene Set | 0.0045 | 71 | 0.02996 | 35 | Genes annotated by the GO term GO:0005635. The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space a gap of width 20-40 nm (also called the perinuclear space). | www.broad.mit.e... |
Broad NUCLEAR_MEMBRANE | View Gene Set | 0.005798 | 48 | 0.03753 | 36 | Genes annotated by the GO term GO:0031965. Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space. | www.broad.mit.e... |
Broad PORE_COMPLEX | View Gene Set | 0.006264 | 34 | 0.03945 | 37 | Genes annotated by the GO term GO:0046930. Any small opening in a membrane that allows the passage of gases and/or liquids. | www.broad.mit.e... |
Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
Broad RNA_BINDING | View Gene Set | 3.254e-08 | 236 | 6.443e-06 | 1 | Genes annotated by the GO term GO:0003723. Interacting selectively with an RNA molecule or a portion thereof. | www.broad.mit.e... |
Broad DNA_BINDING | View Gene Set | 2.964e-08 | 587 | 6.443e-06 | 1 | Genes annotated by the GO term GO:0003677. Interacting selectively with DNA (deoxyribonucleic acid). | www.broad.mit.e... |
Broad TRANSCRIPTION_ACTIVATOR_ACTIVITY | View Gene Set | 4.589e-07 | 169 | 4.77e-05 | 3 | Genes annotated by the GO term GO:0016563. Any transcription regulator activity required for initiation or upregulation of transcription. | www.broad.mit.e... |
Broad TRANSCRIPTION_FACTOR_BINDING | View Gene Set | 4.819e-07 | 300 | 4.77e-05 | 3 | Genes annotated by the GO term GO:0008134. Interacting selectively with a transcription factor any protein required to initiate or regulate transcription. | www.broad.mit.e... |
Broad TRANSCRIPTION_COFACTOR_ACTIVITY | View Gene Set | 1.574e-06 | 222 | 0.0001247 | 5 | Genes annotated by the GO term GO:0003712. The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself. | www.broad.mit.e... |
Broad HORMONE_RECEPTOR_BINDING | View Gene Set | 2.207e-06 | 29 | 0.0001456 | 6 | Genes annotated by the GO term GO:0051427. Interacting selectively with a receptor for hormones. | www.broad.mit.e... |
Broad TRANSCRIPTION_COACTIVATOR_ACTIVITY | View Gene Set | 2.745e-06 | 121 | 0.0001553 | 7 | Genes annotated by the GO term GO:0003713. The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself. | www.broad.mit.e... |
Broad NUCLEAR_HORMONE_RECEPTOR_BINDING | View Gene Set | 4.847e-06 | 28 | 0.0002399 | 8 | Genes annotated by the GO term GO:0035257. Interacting selectively with a nuclear hormone receptor a ligand-dependent receptor found in the nucleus of the cell. | www.broad.mit.e... |
Broad RNA_POLYMERASE_II_TRANSCRIPTION_FACTOR_ACTIVITY | View Gene Set | 5.558e-06 | 182 | 0.0002446 | 9 | Genes annotated by the GO term GO:0003702. Functions to initiate or regulate RNA polymerase II transcription. | www.broad.mit.e... |
Broad TRANSLATION_FACTOR_ACTIVITY_NUCLEIC_ACID_BINDING | View Gene Set | 5.627e-05 | 39 | 0.002228 | 10 | Genes annotated by the GO term GO:0008135. Functions during translation by binding nucleic acids during polypeptide synthesis at the ribosome. | www.broad.mit.e... |
Broad STEROID_HORMONE_RECEPTOR_BINDING | View Gene Set | 6.244e-05 | 10 | 0.002248 | 11 | Genes annotated by the GO term GO:0035258. Interacting selectively with a steroid hormone receptor. | www.broad.mit.e... |
Broad RNA_SPLICING_FACTOR_ACTIVITYTRANSESTERIFICATION_MECHANISM | View Gene Set | 9.978e-05 | 14 | 0.003293 | 12 | Genes annotated by the GO term GO:0031202. An activity which binds RNA and functions to assist splicing of substrate RNA(s) by facilitating the formation and stabilization of a catalytic conformation in which the splice junctions of the RNA(s) to be spliced are positioned for a transesterification reaction that occurs between two sites within the RNA(s) to be spliced. | www.broad.mit.e... |
Broad TRANSLATION_REGULATOR_ACTIVITY | View Gene Set | 0.0001311 | 41 | 0.003993 | 13 | Genes annotated by the GO term GO:0045182. Any substance involved in the initiation activation perpetuation repression or termination of polypeptide synthesis at the ribosome. | www.broad.mit.e... |
Broad CHROMATIN_BINDING | View Gene Set | 0.0001693 | 32 | 0.004789 | 14 | Genes annotated by the GO term GO:0003682. Interacting selectively with chromatin the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase. | www.broad.mit.e... |
Broad SIGNAL_SEQUENCE_BINDING | View Gene Set | 0.001776 | 15 | 0.04684 | 15 | Genes annotated by the GO term GO:0005048. Interacting selectively with a signal sequence a specific peptide sequence found on protein precursors or mature proteins that dictates where the mature protein is localized. | www.broad.mit.e... |
Broad TRANSLATION_INITIATION_FACTOR_ACTIVITY | View Gene Set | 0.001893 | 24 | 0.04684 | 15 | Genes annotated by the GO term GO:0003743. Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide. | www.broad.mit.e... |
Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
PMID 15302935 | View Gene Set | 8.438e-26 | 773 | 2.115e-22 | 1 | Large-scale characterization of HeLa cell nuclear phosphoproteins. | www.ncbi.nlm.ni... |
PMID 16964243 | View Gene Set | 7.02e-16 | 504 | 6.933e-13 | 2 | A probability-based approach for high-throughput protein phosphorylation analysis and site localization. | www.ncbi.nlm.ni... |
PMID 17643375 | View Gene Set | 8.297e-16 | 391 | 6.933e-13 | 2 | Systematic analysis of the protein interaction network for the human transcription machinery reveals the identity of the 7SK capping enzyme. | www.ncbi.nlm.ni... |
PMID 12226669 | View Gene Set | 9.754e-12 | 108 | 6.114e-09 | 4 | Comprehensive proteomic analysis of the human spliceosome. | www.ncbi.nlm.ni... |
PMID 15635413 | View Gene Set | 7.822e-11 | 421 | 3.922e-08 | 5 | Nucleolar proteome dynamics. | www.ncbi.nlm.ni... |
PMID 11991638 | View Gene Set | 1.607e-10 | 74 | 6.715e-08 | 6 | Purification and characterization of native spliceosomes suitable for three-dimensional structural analysis. | www.ncbi.nlm.ni... |
PMID 11790298 | View Gene Set | 2.249e-09 | 208 | 7.392e-07 | 7 | Directed proteomic analysis of the human nucleolus. | www.ncbi.nlm.ni... |
PMID 14559993 | View Gene Set | 2.359e-09 | 51 | 7.392e-07 | 7 | Regulation of alternative splicing by SRrp86 and its interacting proteins. | www.ncbi.nlm.ni... |
PMID 16565220 | View Gene Set | 7.696e-09 | 210 | 2.144e-06 | 9 | Phosphoproteome analysis of the human mitotic spindle. | www.ncbi.nlm.ni... |
PMID 9731529 | View Gene Set | 7.212e-08 | 24 | 1.808e-05 | 10 | Mass spectrometry and EST-database searching allows characterization of the multi-protein spliceosome complex. | www.ncbi.nlm.ni... |
PMID 12429849 | View Gene Set | 5.146e-07 | 106 | 0.0001173 | 11 | Functional proteomic analysis of human nucleolus. | www.ncbi.nlm.ni... |
PMID 12837248 | View Gene Set | 9.857e-07 | 22 | 0.0002059 | 12 | The chromatin-remodeling complex WINAC targets a nuclear receptor to promoters and is impaired in Williams syndrome. | www.ncbi.nlm.ni... |
PMID 16387653 | View Gene Set | 2.203e-06 | 42 | 0.0004249 | 13 | ING tumor suppressor proteins are critical regulators of chromatin acetylation required for genome expression and perpetuation. | www.ncbi.nlm.ni... |
PMID 11500380 | View Gene Set | 2.383e-06 | 10 | 0.0004267 | 14 | A novel U2 and U11/U12 snRNP protein that associates with the pre-mRNA branch site. | www.ncbi.nlm.ni... |
PMID 20085707 | View Gene Set | 2.64e-06 | 42 | 0.0004413 | 15 | Aire's partners in the molecular control of immunological tolerance. | www.ncbi.nlm.ni... |
PMID 8724849 | View Gene Set | 4.698e-06 | 41 | 0.0007362 | 16 | Prediction of the coding sequences of unidentified human genes. V. The coding sequences of 40 new genes (KIAA0161-KIAA0200) deduced by analysis of cDNA clones from human cell line KG-1. | www.ncbi.nlm.ni... |
PMID 11076961 | View Gene Set | 5.868e-06 | 14 | 0.0008654 | 17 | Characterization of vertebrate cohesin complexes and their regulation in prophase. | www.ncbi.nlm.ni... |
PMID 12234937 | View Gene Set | 8.091e-06 | 34 | 0.001127 | 18 | Characterization of novel SF3b and 17S U2 snRNP proteins including a human Prp5p homologue and an SF3b DEAD-box protein. | www.ncbi.nlm.ni... |
PMID 11078522 | View Gene Set | 1.075e-05 | 12 | 0.001418 | 19 | The human SWI/SNF-B chromatin-remodeling complex is related to yeast rsc and localizes at kinetochores of mitotic chromosomes. | www.ncbi.nlm.ni... |
PMID 11780052 | View Gene Set | 1.163e-05 | 517 | 0.001458 | 20 | The DNA sequence and comparative analysis of human chromosome 20. | www.ncbi.nlm.ni... |
PMID 17148452 | View Gene Set | 1.451e-05 | 87 | 0.001706 | 21 | Characterization of the interactome of the human MutL homologues MLH1 PMS1 and PMS2. | www.ncbi.nlm.ni... |
PMID 20516191 | View Gene Set | 1.497e-05 | 12 | 0.001706 | 21 | A rational nomenclature for serine/arginine-rich protein splicing factors (SR proteins). | www.ncbi.nlm.ni... |
PMID 8895581 | View Gene Set | 1.957e-05 | 12 | 0.002133 | 23 | Purification and biochemical heterogeneity of the mammalian SWI-SNF complex. | www.ncbi.nlm.ni... |
PMID 15504738 | View Gene Set | 3.364e-05 | 19 | 0.003514 | 24 | Genes affecting the cell cycle growth maintenance and drug sensitivity are preferentially regulated by anti-HER2 antibody through phosphatidylinositol 3-kinase-AKT signaling. | www.ncbi.nlm.ni... |
PMID 19710015 | View Gene Set | 4.098e-05 | 48 | 0.004109 | 25 | The metastasis efficiency modifier ribosomal RNA processing 1 homolog B (RRP1B) is a chromatin-associated factor. | www.ncbi.nlm.ni... |
PMID 12706105 | View Gene Set | 4.76e-05 | 182 | 0.00459 | 26 | Identification and characterization of over 100 mitochondrial ribosomal protein pseudogenes in the human genome. | www.ncbi.nlm.ni... |
PMID 12388589 | View Gene Set | 6.893e-05 | 17 | 0.0064 | 27 | A receptor for activated C kinase is part of messenger ribonucleoprotein complexes associated with polyA-mRNAs in neurons. | www.ncbi.nlm.ni... |
PMID 18162579 | View Gene Set | 9.463e-05 | 22 | 0.0082 | 28 | Identification of novel human Cdt1-binding proteins by a proteomics approach: proteolytic regulation by APC/CCdh1. | www.ncbi.nlm.ni... |
PMID 20508983 | View Gene Set | 9.486e-05 | 102 | 0.0082 | 28 | Centrosome-related genes genetic variation and risk of breast cancer. | www.ncbi.nlm.ni... |
PMID 10078207 | View Gene Set | 0.0001791 | 10 | 0.01497 | 30 | Reconstitution of a core chromatin remodeling complex from SWI/SNF subunits. | www.ncbi.nlm.ni... |
PMID 11734557 | View Gene Set | 0.0001895 | 12 | 0.01533 | 31 | SYT associates with human SNF/SWI complexes and the C-terminal region of its fusion partner SSX1 targets histones. | www.ncbi.nlm.ni... |
PMID 15146077 | View Gene Set | 0.0002033 | 32 | 0.01545 | 32 | The human 18S U11/U12 snRNP contains a set of novel proteins not found in the U2-dependent spliceosome. | www.ncbi.nlm.ni... |
PMID 9472028 | View Gene Set | 0.000199 | 12 | 0.01545 | 32 | SRPK2: a differentially expressed SR protein-specific kinase involved in mediating the interaction and localization of pre-mRNA splicing factors in mammalian cells. | www.ncbi.nlm.ni... |
PMID 11018012 | View Gene Set | 0.0002225 | 11 | 0.01594 | 34 | Functional selectivity of recombinant mammalian SWI/SNF subunits. | www.ncbi.nlm.ni... |
PMID 19138993 | View Gene Set | 0.0002164 | 25 | 0.01594 | 34 | Genetic variations in microRNA-related genes are novel susceptibility loci for esophageal cancer risk. | www.ncbi.nlm.ni... |
PMID 15456888 | View Gene Set | 0.0002408 | 24 | 0.01655 | 36 | The WW domain-containing proteins interact with the early spliceosome and participate in pre-mRNA splicing in vivo. | www.ncbi.nlm.ni... |
PMID 19047128 | View Gene Set | 0.0002443 | 19 | 0.01655 | 36 | Single nucleotide polymorphisms of microRNA machinery genes modify the risk of renal cell carcinoma. | www.ncbi.nlm.ni... |
PMID 14966270 | View Gene Set | 0.0002513 | 19 | 0.01658 | 38 | Structural and functional conservation of the NuA4 histone acetyltransferase complex from yeast to humans. | www.ncbi.nlm.ni... |
PMID 10983978 | View Gene Set | 0.0003361 | 10 | 0.02055 | 39 | Direct coupling of transcription and mRNA processing through the thermogenic coactivator PGC-1. | www.ncbi.nlm.ni... |
PMID 18485873 | View Gene Set | 0.0003349 | 13 | 0.02055 | 39 | Mechanism of ubiquitin-chain formation by the human anaphase-promoting complex. | www.ncbi.nlm.ni... |
PMID 18997788 | View Gene Set | 0.000326 | 10 | 0.02055 | 39 | The APC/C maintains the spindle assembly checkpoint by targeting Cdc20 for destruction. | www.ncbi.nlm.ni... |
PMID 11101529 | View Gene Set | 0.0004084 | 34 | 0.02437 | 42 | Functional analysis of the human CDC5L complex and identification of its components by mass spectrometry. | www.ncbi.nlm.ni... |
PMID 17363900 | View Gene Set | 0.0004269 | 14 | 0.02489 | 43 | The human Nup107-160 nuclear pore subcomplex contributes to proper kinetochore functions. | www.ncbi.nlm.ni... |
PMID 15647280 | View Gene Set | 0.0004423 | 17 | 0.0252 | 44 | The mammalian YL1 protein is a shared subunit of the TRRAP/TIP60 histone acetyltransferase and SRCAP complexes. | www.ncbi.nlm.ni... |
PMID 15502821 | View Gene Set | 0.0004559 | 12 | 0.0254 | 45 | A conserved Mis12 centromere complex is linked to heterochromatic HP1 and outer kinetochore protein Zwint-1. | www.ncbi.nlm.ni... |
PMID 19690177 | View Gene Set | 0.0004977 | 31 | 0.02712 | 46 | Polymorphic variants in hereditary pancreatic cancer genes are not associated with pancreatic cancer risk. | www.ncbi.nlm.ni... |
PMID 14729942 | View Gene Set | 0.0005705 | 18 | 0.03043 | 47 | Identification of phosphoproteins and their phosphorylation sites in the WEHI-231 B lymphoma cell line. | www.ncbi.nlm.ni... |
PMID 17289661 | View Gene Set | 0.0005932 | 35 | 0.03098 | 48 | Molecular composition of IMP1 ribonucleoprotein granules. | www.ncbi.nlm.ni... |
PMID 18377426 | View Gene Set | 0.0006717 | 20 | 0.03437 | 49 | Interaction of antiproliferative protein Tob with the CCR4-NOT deadenylase complex. | www.ncbi.nlm.ni... |
PMID 1358459 | View Gene Set | 0.0007486 | 40 | 0.0368 | 50 | Vertebrate homeobox gene nomenclature. | www.ncbi.nlm.ni... |
PMID 14578343 | View Gene Set | 0.0007456 | 19 | 0.0368 | 50 | Phosphopeptide binding specificities of BRCA1 COOH-terminal (BRCT) domains. | www.ncbi.nlm.ni... |
PMID 20496165 | View Gene Set | 0.0007804 | 68 | 0.03691 | 52 | Comprehensive screen of genetic variation in DNA repair pathway genes and postmenopausal breast cancer risk. | www.ncbi.nlm.ni... |
PMID 9153318 | View Gene Set | 0.0007708 | 11 | 0.03691 | 52 | CCAAT binding NF-Y-TBP interactions: NF-YB and NF-YC require short domains adjacent to their histone fold motifs for association with TBP basic residues. | www.ncbi.nlm.ni... |
PMID 15009096 | View Gene Set | 0.0009224 | 39 | 0.04283 | 54 | Proteomics analysis of the centromere complex from HeLa interphase cells: UV-damaged DNA binding protein 1 (DDB-1) is a component of the CEN-complex while BMI-1 is transiently co-localized with the centromeric region in interphase. | www.ncbi.nlm.ni... |
PMID 11416179 | View Gene Set | 0.0009818 | 12 | 0.04408 | 55 | All kinesin superfamily protein KIF genes in mouse and human. | www.ncbi.nlm.ni... |
PMID 16364912 | View Gene Set | 0.0009847 | 12 | 0.04408 | 55 | Localization of the coactivator Cdh1 and the cullin subunit Apc2 in a cryo-electron microscopy model of vertebrate APC/C. | www.ncbi.nlm.ni... |
PMID 11535616 | View Gene Set | 0.001055 | 18 | 0.04482 | 57 | Checkpoint inhibition of the APC/C in HeLa cells is mediated by a complex of BUBR1 BUB3 CDC20 and MAD2. | www.ncbi.nlm.ni... |
PMID 14593737 | View Gene Set | 0.001055 | 18 | 0.04482 | 57 | The mitotic checkpoint: a signaling pathway that allows a single unattached kinetochore to inhibit mitotic exit. | www.ncbi.nlm.ni... |
PMID 15231747 | View Gene Set | 0.001024 | 212 | 0.04482 | 57 | A protein interaction framework for human mRNA degradation. | www.ncbi.nlm.ni... |
PMID 11279123 | View Gene Set | 0.001109 | 31 | 0.04633 | 60 | The small subunit of the mammalian mitochondrial ribosome. Identification of the full complement of ribosomal proteins present. | www.ncbi.nlm.ni... |
Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
Null PS50102 | View Gene Set | 2.478e-23 | 229 | 1.822e-20 | 1 | RRM | expasy.org/pros... |
Null PS50157 | View Gene Set | 3.028e-13 | 811 | 1.113e-10 | 2 | ZINC_FINGER_C2H2_2 | expasy.org/pros... |
Null PS00028 | View Gene Set | 7.035e-13 | 830 | 1.724e-10 | 3 | ZINC_FINGER_C2H2_1 | expasy.org/pros... |
Null PS50014 | View Gene Set | 9.881e-07 | 41 | 0.0001816 | 4 | BROMODOMAIN_2 | expasy.org/pros... |
Null PS50805 | View Gene Set | 3.62e-06 | 415 | 0.0005322 | 5 | KRAB | expasy.org/pros... |
Null PS00633 | View Gene Set | 1.927e-05 | 26 | 0.00236 | 6 | BROMODOMAIN_1 | expasy.org/pros... |
Null PS50868 | View Gene Set | 4.02e-05 | 16 | 0.004221 | 7 | POST_SET | expasy.org/pros... |
Null PS50280 | View Gene Set | 0.000109 | 47 | 0.01001 | 8 | SET | expasy.org/pros... |
Null PS50051 | View Gene Set | 0.0002051 | 8 | 0.01675 | 9 | MCM_2 | expasy.org/pros... |
Null PS50016 | View Gene Set | 0.0002418 | 78 | 0.01777 | 10 | ZF_PHD_2 | expasy.org/pros... |
Null PS01359 | View Gene Set | 0.0003641 | 72 | 0.02253 | 11 | ZF_PHD_1 | expasy.org/pros... |
Null PS50166 | View Gene Set | 0.0003678 | 13 | 0.02253 | 11 | IMPORTIN_B_NT | expasy.org/pros... |
Null PS50118 | View Gene Set | 0.0004076 | 63 | 0.02304 | 13 | HMG_BOX_2 | expasy.org/pros... |
Null PS50800 | View Gene Set | 0.0004915 | 23 | 0.02505 | 14 | SAP | expasy.org/pros... |
Null PS50867 | View Gene Set | 0.0005112 | 7 | 0.02505 | 14 | PRE_SET | expasy.org/pros... |
Null PS00847 | View Gene Set | 0.0007439 | 6 | 0.03417 | 16 | MCM_1 | expasy.org/pros... |
Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
Null EC:2.1.1.43 | View Gene Set | 3.981e-06 | 19 | 0.000629 | 1 | Histone-lysine N-methyltransferase | expasy.org/enzy... |
Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
Null ppi.RBL2 | View Gene Set | 0.0007312 | 14 | 0.04607 | 1 | Protein-protein-interaction for RBL2 | www.ncbi.nlm.ni... |
Null ppi.TFF1 | View Gene Set | 0.0003967 | 8 | 0.04607 | 1 | Protein-protein-interaction for TFF1 | www.ncbi.nlm.ni... |
Null ppi.CFLAR | View Gene Set | 0.0005413 | 6 | 0.04607 | 1 | Protein-protein-interaction for CFLAR | www.ncbi.nlm.ni... |
Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
Null ppi.155871 | View Gene Set | 7.673e-14 | 236 | 1.763e-10 | 1 | Protein-protein-interaction for 155871 | www.ncbi.nlm.ni... |
Null ppi.MEPCE | View Gene Set | 5.37e-11 | 147 | 6.168e-08 | 2 | Protein-protein-interaction for MEPCE | www.ncbi.nlm.ni... |
Null ppi.WBP4 | View Gene Set | 5.266e-10 | 35 | 4.032e-07 | 3 | Protein-protein-interaction for WBP4 | www.ncbi.nlm.ni... |
Null ppi.SRRM1 | View Gene Set | 3.825e-09 | 64 | 2.197e-06 | 4 | Protein-protein-interaction for SRRM1 | www.ncbi.nlm.ni... |
Null ppi.PRPF40A | View Gene Set | 4.657e-08 | 53 | 2.139e-05 | 5 | Protein-protein-interaction for PRPF40A | www.ncbi.nlm.ni... |
Null ppi.SRRM2 | View Gene Set | 2.631e-07 | 101 | 0.0001007 | 6 | Protein-protein-interaction for SRRM2 | www.ncbi.nlm.ni... |
Null ppi.ING5 | View Gene Set | 5.976e-07 | 20 | 0.0001961 | 7 | Protein-protein-interaction for ING5 | www.ncbi.nlm.ni... |
Null ppi.HIST1H4A | View Gene Set | 1.414e-06 | 28 | 0.000406 | 8 | Protein-protein-interaction for HIST1H4A | www.ncbi.nlm.ni... |
Null ppi.KLF1 | View Gene Set | 5.091e-06 | 13 | 0.001299 | 9 | Protein-protein-interaction for KLF1 | www.ncbi.nlm.ni... |
Null ppi.BCL7C | View Gene Set | 7.068e-06 | 11 | 0.001624 | 10 | Protein-protein-interaction for BCL7C | www.ncbi.nlm.ni... |
Null ppi.CBX5 | View Gene Set | 1.047e-05 | 38 | 0.002185 | 11 | Protein-protein-interaction for CBX5 | www.ncbi.nlm.ni... |
Null ppi.72462 | View Gene Set | 1.908e-05 | 42 | 0.003652 | 12 | Protein-protein-interaction for 72462 | www.ncbi.nlm.ni... |
Null ppi.TAF6 | View Gene Set | 4.2e-05 | 19 | 0.007421 | 13 | Protein-protein-interaction for TAF6 | www.ncbi.nlm.ni... |
Null ppi.TCERG1 | View Gene Set | 5.113e-05 | 35 | 0.00839 | 14 | Protein-protein-interaction for TCERG1 | www.ncbi.nlm.ni... |
Null ppi.CBX3 | View Gene Set | 6.867e-05 | 23 | 0.01052 | 15 | Protein-protein-interaction for CBX3 | www.ncbi.nlm.ni... |
Null ppi.CARM1 | View Gene Set | 7.91e-05 | 32 | 0.01136 | 16 | Protein-protein-interaction for CARM1 | www.ncbi.nlm.ni... |
Null ppi.CHEK2 | View Gene Set | 8.418e-05 | 19 | 0.01137 | 17 | Protein-protein-interaction for CHEK2 | www.ncbi.nlm.ni... |
Null ppi.THRA | View Gene Set | 0.0001331 | 16 | 0.01698 | 18 | Protein-protein-interaction for THRA | www.ncbi.nlm.ni... |
Null ppi.SF3B2 | View Gene Set | 0.0001554 | 11 | 0.01879 | 19 | Protein-protein-interaction for SF3B2 | www.ncbi.nlm.ni... |
Null ppi.SSRP1 | View Gene Set | 0.000176 | 15 | 0.02022 | 20 | Protein-protein-interaction for SSRP1 | www.ncbi.nlm.ni... |
Null ppi.MDM4 | View Gene Set | 0.0002349 | 10 | 0.0214 | 21 | Protein-protein-interaction for MDM4 | www.ncbi.nlm.ni... |
Null ppi.SP1 | View Gene Set | 0.0002205 | 79 | 0.0214 | 21 | Protein-protein-interaction for SP1 | www.ncbi.nlm.ni... |
Null ppi.ZEB1 | View Gene Set | 0.0002188 | 6 | 0.0214 | 21 | Protein-protein-interaction for ZEB1 | www.ncbi.nlm.ni... |
Null ppi.MCPH1 | View Gene Set | 0.0002283 | 17 | 0.0214 | 21 | Protein-protein-interaction for MCPH1 | www.ncbi.nlm.ni... |
Null ppi.HIST1H3A | View Gene Set | 0.0002196 | 30 | 0.0214 | 21 | Protein-protein-interaction for HIST1H3A | www.ncbi.nlm.ni... |
Null ppi.CDC16 | View Gene Set | 0.0002422 | 10 | 0.0214 | 21 | Protein-protein-interaction for CDC16 | www.ncbi.nlm.ni... |
Null ppi.NCOA6 | View Gene Set | 0.0002746 | 48 | 0.02227 | 27 | Protein-protein-interaction for NCOA6 | www.ncbi.nlm.ni... |
Null ppi.CDC7 | View Gene Set | 0.0002731 | 7 | 0.02227 | 27 | Protein-protein-interaction for CDC7 | www.ncbi.nlm.ni... |
Null ppi.HIST2H2AC | View Gene Set | 0.0002812 | 13 | 0.02227 | 27 | Protein-protein-interaction for HIST2H2AC | www.ncbi.nlm.ni... |
Null ppi.855836 | View Gene Set | 0.000375 | 8 | 0.02871 | 30 | Protein-protein-interaction for 855836 | www.ncbi.nlm.ni... |
Null ppi.WWOX | View Gene Set | 0.0004253 | 19 | 0.03151 | 31 | Protein-protein-interaction for WWOX | www.ncbi.nlm.ni... |
Null ppi.MDC1 | View Gene Set | 0.0004532 | 20 | 0.03253 | 32 | Protein-protein-interaction for MDC1 | www.ncbi.nlm.ni... |
Null ppi.IMMT | View Gene Set | 0.0005355 | 15 | 0.03727 | 33 | Protein-protein-interaction for IMMT | www.ncbi.nlm.ni... |
Null ppi.RELB | View Gene Set | 0.0005579 | 10 | 0.03769 | 34 | Protein-protein-interaction for RELB | www.ncbi.nlm.ni... |
Null ppi.U2AF2 | View Gene Set | 0.0006538 | 14 | 0.03998 | 35 | Protein-protein-interaction for U2AF2 | www.ncbi.nlm.ni... |
Null ppi.HSPA8 | View Gene Set | 0.000643 | 21 | 0.03998 | 35 | Protein-protein-interaction for HSPA8 | www.ncbi.nlm.ni... |
Null ppi.PIAS4 | View Gene Set | 0.0006762 | 22 | 0.03998 | 35 | Protein-protein-interaction for PIAS4 | www.ncbi.nlm.ni... |
Null ppi.ING3 | View Gene Set | 0.000731 | 10 | 0.03998 | 35 | Protein-protein-interaction for ING3 | www.ncbi.nlm.ni... |
Null ppi.PSMD10 | View Gene Set | 0.0006432 | 14 | 0.03998 | 35 | Protein-protein-interaction for PSMD10 | www.ncbi.nlm.ni... |
Null ppi.TP53BP1 | View Gene Set | 0.0007278 | 13 | 0.03998 | 35 | Protein-protein-interaction for TP53BP1 | www.ncbi.nlm.ni... |
Null ppi.MIS12 | View Gene Set | 0.0007115 | 9 | 0.03998 | 35 | Protein-protein-interaction for MIS12 | www.ncbi.nlm.ni... |
Null ppi.NUP153 | View Gene Set | 0.0007279 | 11 | 0.03998 | 35 | Protein-protein-interaction for NUP153 | www.ncbi.nlm.ni... |
Null ppi.UCHL5 | View Gene Set | 0.000749 | 33 | 0.04001 | 43 | Protein-protein-interaction for UCHL5 | www.ncbi.nlm.ni... |
Null ppi.SF3B3 | View Gene Set | 0.0008553 | 16 | 0.04465 | 44 | Protein-protein-interaction for SF3B3 | www.ncbi.nlm.ni... |
Null ppi.SF3A3 | View Gene Set | 0.0009035 | 7 | 0.04612 | 45 | Protein-protein-interaction for SF3A3 | www.ncbi.nlm.ni... |
Null ppi.RNPS1 | View Gene Set | 0.000996 | 38 | 0.04868 | 46 | Protein-protein-interaction for RNPS1 | www.ncbi.nlm.ni... |
Null ppi.DEK | View Gene Set | 0.0009911 | 8 | 0.04868 | 46 | Protein-protein-interaction for DEK | www.ncbi.nlm.ni... |
Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
Null ppi.SFRS12 | View Gene Set | 2.142e-09 | 49 | 5.084e-06 | 1 | Protein-protein-interaction for SFRS12 | www.ncbi.nlm.ni... |
Null ppi.MDC1 | View Gene Set | 2.767e-05 | 11 | 0.03284 | 2 | Protein-protein-interaction for MDC1 | www.ncbi.nlm.ni... |
Null ppi.PARP2 | View Gene Set | 6.668e-05 | 7 | 0.03639 | 3 | Protein-protein-interaction for PARP2 | www.ncbi.nlm.ni... |
Null ppi.NCOA6 | View Gene Set | 9.002e-05 | 36 | 0.03639 | 3 | Protein-protein-interaction for NCOA6 | www.ncbi.nlm.ni... |
Null ppi.RAN | View Gene Set | 5.844e-05 | 14 | 0.03639 | 3 | Protein-protein-interaction for RAN | www.ncbi.nlm.ni... |
Null ppi.RFX1 | View Gene Set | 0.0001065 | 11 | 0.03639 | 3 | Protein-protein-interaction for RFX1 | www.ncbi.nlm.ni... |
Null ppi.TAF10 | View Gene Set | 0.0001073 | 13 | 0.03639 | 3 | Protein-protein-interaction for TAF10 | www.ncbi.nlm.ni... |
Null ppi.PRPF40A | View Gene Set | 0.000138 | 55 | 0.04094 | 8 | Protein-protein-interaction for PRPF40A | www.ncbi.nlm.ni... |
Null ppi.TAF11 | View Gene Set | 0.0001625 | 12 | 0.04286 | 9 | Protein-protein-interaction for TAF11 | www.ncbi.nlm.ni... |
Null ppi.TAF1 | View Gene Set | 0.0002048 | 16 | 0.04863 | 10 | Protein-protein-interaction for TAF1 | www.ncbi.nlm.ni... |
Null ppi.SF3B1 | View Gene Set | 0.0002478 | 9 | 0.04902 | 11 | Protein-protein-interaction for SF3B1 | www.ncbi.nlm.ni... |
Null ppi.ZEB1 | View Gene Set | 0.0002275 | 6 | 0.04902 | 11 | Protein-protein-interaction for ZEB1 | www.ncbi.nlm.ni... |
Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
Null ppi.155871 | View Gene Set | 6.217e-14 | 251 | 2.235e-10 | 1 | Protein-protein-interaction for 155871 | www.ncbi.nlm.ni... |
Null ppi.MEPCE | View Gene Set | 5.37e-11 | 147 | 9.651e-08 | 2 | Protein-protein-interaction for MEPCE | www.ncbi.nlm.ni... |
Null ppi.WBP4 | View Gene Set | 5.266e-10 | 35 | 6.309e-07 | 3 | Protein-protein-interaction for WBP4 | www.ncbi.nlm.ni... |
Null ppi.SFRS12 | View Gene Set | 8.167e-10 | 50 | 7.338e-07 | 4 | Protein-protein-interaction for SFRS12 | www.ncbi.nlm.ni... |
Null ppi.SRRM1 | View Gene Set | 9.405e-09 | 66 | 6.761e-06 | 5 | Protein-protein-interaction for SRRM1 | www.ncbi.nlm.ni... |
Null ppi.PRPF40A | View Gene Set | 2.377e-08 | 96 | 1.424e-05 | 6 | Protein-protein-interaction for PRPF40A | www.ncbi.nlm.ni... |
Null ppi.SRRM2 | View Gene Set | 2.631e-07 | 101 | 0.0001351 | 7 | Protein-protein-interaction for SRRM2 | www.ncbi.nlm.ni... |
Null ppi.HIST1H4A | View Gene Set | 1.316e-06 | 31 | 0.0005914 | 8 | Protein-protein-interaction for HIST1H4A | www.ncbi.nlm.ni... |
Null ppi.CBX5 | View Gene Set | 7.555e-06 | 46 | 0.002715 | 9 | Protein-protein-interaction for CBX5 | www.ncbi.nlm.ni... |
Null ppi.BCL7C | View Gene Set | 7.068e-06 | 11 | 0.002715 | 9 | Protein-protein-interaction for BCL7C | www.ncbi.nlm.ni... |
Null ppi.TAF11 | View Gene Set | 1.556e-05 | 19 | 0.004659 | 11 | Protein-protein-interaction for TAF11 | www.ncbi.nlm.ni... |
Null ppi.ING5 | View Gene Set | 1.507e-05 | 25 | 0.004659 | 11 | Protein-protein-interaction for ING5 | www.ncbi.nlm.ni... |
Null ppi.SSRP1 | View Gene Set | 1.986e-05 | 21 | 0.005098 | 13 | Protein-protein-interaction for SSRP1 | www.ncbi.nlm.ni... |
Null ppi.72462 | View Gene Set | 1.908e-05 | 42 | 0.005098 | 13 | Protein-protein-interaction for 72462 | www.ncbi.nlm.ni... |
Null ppi.MDC1 | View Gene Set | 2.791e-05 | 24 | 0.006687 | 15 | Protein-protein-interaction for MDC1 | www.ncbi.nlm.ni... |
Null ppi.RAN | View Gene Set | 3.018e-05 | 15 | 0.00678 | 16 | Protein-protein-interaction for RAN | www.ncbi.nlm.ni... |
Null ppi.KLF1 | View Gene Set | 4.226e-05 | 14 | 0.008437 | 17 | Protein-protein-interaction for KLF1 | www.ncbi.nlm.ni... |
Null ppi.SF3B2 | View Gene Set | 4.043e-05 | 12 | 0.008437 | 17 | Protein-protein-interaction for SF3B2 | www.ncbi.nlm.ni... |
Null ppi.PIAS4 | View Gene Set | 5.294e-05 | 47 | 0.01001 | 19 | Protein-protein-interaction for PIAS4 | www.ncbi.nlm.ni... |
Null ppi.CARM1 | View Gene Set | 6.069e-05 | 35 | 0.01091 | 20 | Protein-protein-interaction for CARM1 | www.ncbi.nlm.ni... |
Null ppi.TCERG1 | View Gene Set | 6.635e-05 | 39 | 0.01136 | 21 | Protein-protein-interaction for TCERG1 | www.ncbi.nlm.ni... |
Null ppi.TAF6 | View Gene Set | 7.223e-05 | 23 | 0.0118 | 22 | Protein-protein-interaction for TAF6 | www.ncbi.nlm.ni... |
Null ppi.CBX3 | View Gene Set | 8.046e-05 | 26 | 0.01257 | 23 | Protein-protein-interaction for CBX3 | www.ncbi.nlm.ni... |
Null ppi.PBRM1 | View Gene Set | 8.49e-05 | 7 | 0.01271 | 24 | Protein-protein-interaction for PBRM1 | www.ncbi.nlm.ni... |
Null ppi.NCOA6 | View Gene Set | 9.706e-05 | 61 | 0.01395 | 25 | Protein-protein-interaction for NCOA6 | www.ncbi.nlm.ni... |
Null ppi.SP1 | View Gene Set | 0.0001099 | 104 | 0.0152 | 26 | Protein-protein-interaction for SP1 | www.ncbi.nlm.ni... |
Null ppi.TPX2 | View Gene Set | 0.0001363 | 5 | 0.01758 | 27 | Protein-protein-interaction for TPX2 | www.ncbi.nlm.ni... |
Null ppi.HIST2H2AC | View Gene Set | 0.000137 | 14 | 0.01758 | 27 | Protein-protein-interaction for HIST2H2AC | www.ncbi.nlm.ni... |
Null ppi.TP53BP1 | View Gene Set | 0.000153 | 17 | 0.01896 | 29 | Protein-protein-interaction for TP53BP1 | www.ncbi.nlm.ni... |
Null ppi.RFX1 | View Gene Set | 0.0001692 | 12 | 0.02027 | 30 | Protein-protein-interaction for RFX1 | www.ncbi.nlm.ni... |
Null ppi.TFF1 | View Gene Set | 0.0001819 | 9 | 0.02109 | 31 | Protein-protein-interaction for TFF1 | www.ncbi.nlm.ni... |
Null ppi.CHEK2 | View Gene Set | 0.000196 | 33 | 0.02201 | 32 | Protein-protein-interaction for CHEK2 | www.ncbi.nlm.ni... |
Null ppi.XRN1 | View Gene Set | 0.0002275 | 25 | 0.02279 | 33 | Protein-protein-interaction for XRN1 | www.ncbi.nlm.ni... |
Null ppi.XPO1 | View Gene Set | 0.0002209 | 43 | 0.02279 | 33 | Protein-protein-interaction for XPO1 | www.ncbi.nlm.ni... |
Null ppi.MCPH1 | View Gene Set | 0.0002283 | 17 | 0.02279 | 33 | Protein-protein-interaction for MCPH1 | www.ncbi.nlm.ni... |
Null ppi.HIST1H3A | View Gene Set | 0.000218 | 31 | 0.02279 | 33 | Protein-protein-interaction for HIST1H3A | www.ncbi.nlm.ni... |
Null ppi.SAFB | View Gene Set | 0.0002834 | 9 | 0.0268 | 37 | Protein-protein-interaction for SAFB | www.ncbi.nlm.ni... |
Null ppi.YY1 | View Gene Set | 0.0002774 | 39 | 0.0268 | 37 | Protein-protein-interaction for YY1 | www.ncbi.nlm.ni... |
Null ppi.TGS1 | View Gene Set | 0.0003094 | 8 | 0.02851 | 39 | Protein-protein-interaction for TGS1 | www.ncbi.nlm.ni... |
Null ppi.SF3A3 | View Gene Set | 0.0003282 | 8 | 0.02949 | 40 | Protein-protein-interaction for SF3A3 | www.ncbi.nlm.ni... |
Null ppi.PARP2 | View Gene Set | 0.0003619 | 10 | 0.03172 | 41 | Protein-protein-interaction for PARP2 | www.ncbi.nlm.ni... |
Null ppi.855836 | View Gene Set | 0.000375 | 8 | 0.03209 | 42 | Protein-protein-interaction for 855836 | www.ncbi.nlm.ni... |
Null ppi.ING3 | View Gene Set | 0.0004036 | 12 | 0.03373 | 43 | Protein-protein-interaction for ING3 | www.ncbi.nlm.ni... |
Null ppi.SF3B3 | View Gene Set | 0.0004141 | 19 | 0.03382 | 44 | Protein-protein-interaction for SF3B3 | www.ncbi.nlm.ni... |
Null ppi.RYBP | View Gene Set | 0.0004509 | 15 | 0.03509 | 45 | Protein-protein-interaction for RYBP | www.ncbi.nlm.ni... |
Null ppi.SF3B1 | View Gene Set | 0.0004573 | 31 | 0.03509 | 45 | Protein-protein-interaction for SF3B1 | www.ncbi.nlm.ni... |
Null ppi.EAPP | View Gene Set | 0.0004606 | 6 | 0.03509 | 45 | Protein-protein-interaction for EAPP | www.ncbi.nlm.ni... |
Null ppi.TAF10 | View Gene Set | 0.0004784 | 29 | 0.03509 | 45 | Protein-protein-interaction for TAF10 | www.ncbi.nlm.ni... |
Null ppi.CDC16 | View Gene Set | 0.0004724 | 14 | 0.03509 | 45 | Protein-protein-interaction for CDC16 | www.ncbi.nlm.ni... |
Null ppi.PSMD10 | View Gene Set | 0.000533 | 16 | 0.03756 | 50 | Protein-protein-interaction for PSMD10 | www.ncbi.nlm.ni... |
Null ppi.TAF1 | View Gene Set | 0.0005311 | 24 | 0.03756 | 50 | Protein-protein-interaction for TAF1 | www.ncbi.nlm.ni... |
Null ppi.RELB | View Gene Set | 0.0005579 | 10 | 0.03783 | 52 | Protein-protein-interaction for RELB | www.ncbi.nlm.ni... |
Null ppi.KAT2B | View Gene Set | 0.0005551 | 88 | 0.03783 | 52 | Protein-protein-interaction for KAT2B | www.ncbi.nlm.ni... |
Null ppi.XPO5 | View Gene Set | 0.0005742 | 14 | 0.03822 | 54 | Protein-protein-interaction for XPO5 | www.ncbi.nlm.ni... |
Null ppi.ITGB3BP | View Gene Set | 0.0006731 | 13 | 0.0405 | 55 | Protein-protein-interaction for ITGB3BP | www.ncbi.nlm.ni... |
Null ppi.ATXN3 | View Gene Set | 0.0006686 | 7 | 0.0405 | 55 | Protein-protein-interaction for ATXN3 | www.ncbi.nlm.ni... |
Null ppi.PTMA | View Gene Set | 0.0006312 | 21 | 0.0405 | 55 | Protein-protein-interaction for PTMA | www.ncbi.nlm.ni... |
Null ppi.RAD51 | View Gene Set | 0.0006762 | 20 | 0.0405 | 55 | Protein-protein-interaction for RAD51 | www.ncbi.nlm.ni... |
Null ppi.ATXN7 | View Gene Set | 0.0006213 | 11 | 0.0405 | 55 | Protein-protein-interaction for ATXN7 | www.ncbi.nlm.ni... |
Null ppi.NUP153 | View Gene Set | 0.0006722 | 16 | 0.0405 | 55 | Protein-protein-interaction for NUP153 | www.ncbi.nlm.ni... |
Null ppi.MIS12 | View Gene Set | 0.0007115 | 9 | 0.04192 | 61 | Protein-protein-interaction for MIS12 | www.ncbi.nlm.ni... |
Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
Null AndrogenReceptor | View Gene Set | 4.517e-05 | 78 | 0.0004517 | 1 | CELL_MAP - AndrogenReceptor gene set | www.pathwaycomm... |
Null TNF alpha/NF-kB | View Gene Set | 0.009242 | 170 | 0.04621 | 2 | CELL_MAP - TNF alpha/NF-kB gene set | www.pathwaycomm... |
Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
Null Aurora B signaling | View Gene Set | 2.185e-05 | 41 | 0.004065 | 1 | NCI_NATURE - Aurora B signaling gene set | www.pathwaycomm... |
Null C-MYC pathway | View Gene Set | 0.0001203 | 149 | 0.01119 | 2 | NCI_NATURE - C-MYC pathway gene set | www.pathwaycomm... |
Null Regulation of retinoblastoma protein | View Gene Set | 0.0004418 | 66 | 0.02739 | 3 | NCI_NATURE - Regulation of retinoblastoma protein gene set | www.pathwaycomm... |
Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
Null Processing of Capped Intron-Containing Pre-mRNA | View Gene Set | 4.974e-12 | 138 | 5.556e-09 | 1 | REACTOME - Processing of Capped Intron-Containing Pre-mRNA gene set | www.pathwaycomm... |
Null mRNA Splicing - Major Pathway | View Gene Set | 2.468e-11 | 107 | 9.19e-09 | 2 | REACTOME - mRNA Splicing - Major Pathway gene set | www.pathwaycomm... |
Null mRNA Splicing | View Gene Set | 2.468e-11 | 107 | 9.19e-09 | 2 | REACTOME - mRNA Splicing gene set | www.pathwaycomm... |
Null Gene Expression | View Gene Set | 5.486e-11 | 381 | 1.532e-08 | 4 | REACTOME - Gene Expression gene set | www.pathwaycomm... |
Null Formation and Maturation of mRNA Transcript | View Gene Set | 7.376e-11 | 185 | 1.648e-08 | 5 | REACTOME - Formation and Maturation of mRNA Transcript gene set | www.pathwaycomm... |
Null mRNA Processing | View Gene Set | 4.076e-10 | 158 | 7.589e-08 | 6 | REACTOME - mRNA Processing gene set | www.pathwaycomm... |
Null Mitotic M-M/G1 phases | View Gene Set | 4.844e-09 | 180 | 7.729e-07 | 7 | REACTOME - Mitotic M-M/G1 phases gene set | www.pathwaycomm... |
Null M Phase | View Gene Set | 8.008e-09 | 90 | 1.118e-06 | 8 | REACTOME - M Phase gene set | www.pathwaycomm... |
Null DNA Replication | View Gene Set | 2.405e-08 | 200 | 2.985e-06 | 9 | REACTOME - DNA Replication gene set | www.pathwaycomm... |
Null Mitotic Prometaphase | View Gene Set | 4.771e-08 | 86 | 5.329e-06 | 10 | REACTOME - Mitotic Prometaphase gene set | www.pathwaycomm... |
Null Cell Cycle Mitotic | View Gene Set | 2.88e-07 | 312 | 2.925e-05 | 11 | REACTOME - Cell Cycle Mitotic gene set | www.pathwaycomm... Mitotic&format=... |
Null Deadenylation of mRNA | View Gene Set | 4.108e-06 | 22 | 0.0003824 | 12 | REACTOME - Deadenylation of mRNA gene set | www.pathwaycomm... |
Null Metabolism of RNA | View Gene Set | 5.135e-06 | 174 | 0.0004412 | 13 | REACTOME - Metabolism of RNA gene set | www.pathwaycomm... |
Null Transport of Mature mRNA derived from an Intron-Containing Transcript | View Gene Set | 8.243e-06 | 51 | 0.0006577 | 14 | REACTOME - Transport of Mature mRNA derived from an Intron-Containing Transcript gene set | www.pathwaycomm... |
Null Post-Elongation Processing of Intron-Containing pre-mRNA | View Gene Set | 1.266e-05 | 34 | 0.0008355 | 15 | REACTOME - Post-Elongation Processing of Intron-Containing pre-mRNA gene set | www.pathwaycomm... |
Null mRNA 3'-end processing | View Gene Set | 1.266e-05 | 34 | 0.0008355 | 15 | REACTOME - mRNA 3'-end processing gene set | www.pathwaycomm... |
Null Deadenylation-dependent mRNA decay | View Gene Set | 1.272e-05 | 46 | 0.0008355 | 15 | REACTOME - Deadenylation-dependent mRNA decay gene set | www.pathwaycomm... |
Null Post-Elongation Processing of the Transcript | View Gene Set | 1.623e-05 | 43 | 0.0009066 | 18 | REACTOME - Post-Elongation Processing of the Transcript gene set | www.pathwaycomm... |
Null Cleavage of Growing Transcript in the Termination Region | View Gene Set | 1.623e-05 | 43 | 0.0009066 | 18 | REACTOME - Cleavage of Growing Transcript in the Termination Region gene set | www.pathwaycomm... |
Null RNA Polymerase II Transcription Termination | View Gene Set | 1.623e-05 | 43 | 0.0009066 | 18 | REACTOME - RNA Polymerase II Transcription Termination gene set | www.pathwaycomm... |
Null Mitotic Telophase /Cytokinesis | View Gene Set | 2.523e-05 | 10 | 0.001342 | 21 | REACTOME - Mitotic Telophase /Cytokinesis gene set | www.pathwaycomm... |
Null Transport of Mature Transcript to Cytoplasm | View Gene Set | 3.812e-05 | 55 | 0.001935 | 22 | REACTOME - Transport of Mature Transcript to Cytoplasm gene set | www.pathwaycomm... |
Null Polo-like kinase mediated events | View Gene Set | 4.573e-05 | 10 | 0.002221 | 23 | REACTOME - Polo-like kinase mediated events gene set | www.pathwaycomm... |
Null Phosphorylation of the APC/C | View Gene Set | 0.0001821 | 26 | 0.008473 | 24 | REACTOME - Phosphorylation of the APC/C gene set | www.pathwaycomm... |
Null Transcription | View Gene Set | 0.0002865 | 178 | 0.0128 | 25 | REACTOME - Transcription gene set | www.pathwaycomm... |
Null Interactions of Rev with host cellular proteins | View Gene Set | 0.000444 | 33 | 0.01907 | 26 | REACTOME - Interactions of Rev with host cellular proteins gene set | www.pathwaycomm... |
Null Metabolism of mRNA | View Gene Set | 0.0005361 | 125 | 0.02113 | 27 | REACTOME - Metabolism of mRNA gene set | www.pathwaycomm... |
Null snRNP Assembly | View Gene Set | 0.0005486 | 50 | 0.02113 | 27 | REACTOME - snRNP Assembly gene set | www.pathwaycomm... |
Null Metabolism of non-coding RNA | View Gene Set | 0.0005486 | 50 | 0.02113 | 27 | REACTOME - Metabolism of non-coding RNA gene set | www.pathwaycomm... |
Null Cell Cycle Checkpoints | View Gene Set | 0.0006191 | 124 | 0.02194 | 30 | REACTOME - Cell Cycle Checkpoints gene set | www.pathwaycomm... |
Null Pyrimidine biosynthesis | View Gene Set | 0.0006285 | 6 | 0.02194 | 30 | REACTOME - Pyrimidine biosynthesis gene set | www.pathwaycomm... |
Null Mitotic Metaphase/Anaphase Transition | View Gene Set | 0.0006117 | 8 | 0.02194 | 30 | REACTOME - Mitotic Metaphase/Anaphase Transition gene set | www.pathwaycomm... |
Null Activation of APC/C and APC/C:Cdc20 mediated degradation of mitotic proteins | View Gene Set | 0.0007805 | 86 | 0.02642 | 33 | REACTOME - Activation of APC/C and APC/C:Cdc20 mediated degradation of mitotic proteins gene set | www.pathwaycomm... |
Null Regulation of mitotic cell cycle | View Gene Set | 0.0008431 | 95 | 0.02691 | 34 | REACTOME - Regulation of mitotic cell cycle gene set | www.pathwaycomm... |
Null APC/C-mediated degradation of cell cycle proteins | View Gene Set | 0.0008431 | 95 | 0.02691 | 34 | REACTOME - APC/C-mediated degradation of cell cycle proteins gene set | www.pathwaycomm... |
Null Rev-mediated nuclear export of HIV-1 RNA | View Gene Set | 0.00107 | 32 | 0.03144 | 36 | REACTOME - Rev-mediated nuclear export of HIV-1 RNA gene set | www.pathwaycomm... |
Null Inhibition of the proteolytic activity of APC/C required for the onset of anaphase by mitotic spindle checkpoint components | View Gene Set | 0.001055 | 18 | 0.03144 | 36 | REACTOME - Inhibition of the proteolytic activity of APC/C required for the onset of anaphase by mitotic spindle checkpoint components gene set | www.pathwaycomm... |
Null Inactivation of APC/C via direct inhibition of the APC/C complex | View Gene Set | 0.001055 | 18 | 0.03144 | 36 | REACTOME - Inactivation of APC/C via direct inhibition of the APC/C complex gene set | www.pathwaycomm... |
Null Host Interactions of HIV factors | View Gene Set | 0.001457 | 132 | 0.0397 | 39 | REACTOME - Host Interactions of HIV factors gene set | www.pathwaycomm... |
Null RNA Polymerase II Transcription | View Gene Set | 0.001428 | 101 | 0.0397 | 39 | REACTOME - RNA Polymerase II Transcription gene set | www.pathwaycomm... |
Null Regulation of APC/C activators between G1/S and early anaphase | View Gene Set | 0.001391 | 88 | 0.0397 | 39 | REACTOME - Regulation of APC/C activators between G1/S and early anaphase gene set | www.pathwaycomm... |
Null Nuclear import of Rev protein | View Gene Set | 0.001526 | 30 | 0.04057 | 42 | REACTOME - Nuclear import of Rev protein gene set | www.pathwaycomm... |
Null Transport of Ribonucleoproteins into the Host Nucleus | View Gene Set | 0.001602 | 29 | 0.04161 | 43 | REACTOME - Transport of Ribonucleoproteins into the Host Nucleus gene set | www.pathwaycomm... |
Null Phosphorylation of Emi1 | View Gene Set | 0.001894 | 12 | 0.04807 | 44 | REACTOME - Phosphorylation of Emi1 gene set | www.pathwaycomm... |
Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
Null V_YY1_02 | View Gene Set | 7.203e-05 | 163 | 0.01534 | 1 | List of genes containing a conserved (FDR < 0.1%) V$YY1_02 TFBS located within 3 kb around the TSS for the YY1 transcription factor | www.gene-regula... |