Results

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Go to: Gene Set Collection: KEGG
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Go to: Gene Set Collection: Broad.c1.CYTOBAND
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Go to: Gene Set Collection: Broad.c2.CP.KEGG
Go to: Gene Set Collection: Broad.c2.CP.REACTOME
Go to: Gene Set Collection: Broad.c3.MIR
Go to: Gene Set Collection: Broad.c3.TFT
Go to: Gene Set Collection: Broad.c4.CGN
Go to: Gene Set Collection: Broad.c4.CM
Go to: Gene Set Collection: Broad.c5.BP
Go to: Gene Set Collection: Broad.c5.CC
Go to: Gene Set Collection: Broad.c5.MF
Go to: Gene Set Collection: PMID
Go to: Gene Set Collection: Prosite
Go to: Gene Set Collection: Enzyme
Go to: Gene Set Collection: ppi.BioGRID
Go to: Gene Set Collection: ppi.HPRD
Go to: Gene Set Collection: ppi.anyDB
Go to: Gene Set Collection: pathwayCommons.cell-map
Go to: Gene Set Collection: pathwayCommons.nci-nature
Go to: Gene Set Collection: pathwayCommons.reactome
Go to: Gene Set Collection: miranda.targets
Go to: Gene Set Collection: mirbase.targets
Go to: Gene Set Collection: mirtarget2.targets
Go to: Gene Set Collection: pictar.targets
Go to: Gene Set Collection: targetscan.targets
Go to: Gene Set Collection: miRNAtargetIntersection
Go to: Gene Set Collection: miRNAtargetUnion

AFA results for: VPA1e03.ls

Click on the heading for any column to sort by that column.

Gene Set Collection: KEGG

Arguments: refPop=all, featureType=featureNames, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
KEGG 03040 View Gene Set 2.676e-18 128 5.728e-16 1 Spliceosome www.genome.jp/d...
KEGG 04110 View Gene Set 4.576e-07 128 4.896e-05 2 Cell cycle www.genome.jp/d...
KEGG 00240 View Gene Set 5.71e-06 99 0.0003118 3 Pyrimidine metabolism www.genome.jp/d...
KEGG 03018 View Gene Set 5.828e-06 59 0.0003118 3 RNA degradation www.genome.jp/d...
KEGG 03030 View Gene Set 0.000231 36 0.006613 5 DNA replication www.genome.jp/d...
KEGG 03050 View Gene Set 0.0001767 48 0.006613 5 Proteasome www.genome.jp/d...
KEGG 03430 View Gene Set 0.0002472 23 0.006613 5 Mismatch repair www.genome.jp/d...
KEGG 04120 View Gene Set 0.0001908 139 0.006613 5 Ubiquitin mediated proteolysis www.genome.jp/d...
KEGG 03420 View Gene Set 0.001427 44 0.03394 9 Nucleotide excision repair www.genome.jp/d...

Gene Set Collection: GO

Arguments: refPop=all, featureType=featureNames, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
GO GO:0044428 View Gene Set 2.284e-58 1938 3.052e-54 1 nuclear part amigo.geneontol...
GO GO:0005634 View Gene Set 1.058e-57 5198 7.067e-54 2 nucleus amigo.geneontol...
GO GO:0031981 View Gene Set 4.62e-50 1518 1.543e-46 3 nuclear lumen amigo.geneontol...
GO GO:0070013 View Gene Set 4.416e-50 1845 1.543e-46 3 intracellular organelle lumen amigo.geneontol...
GO GO:0031974 View Gene Set 2.307e-47 1917 5.42e-44 5 membrane-enclosed lumen amigo.geneontol...
GO GO:0043233 View Gene Set 2.434e-47 1881 5.42e-44 5 organelle lumen amigo.geneontol...
GO GO:0043227 View Gene Set 1.069e-46 8383 1.937e-43 7 membrane-bounded organelle amigo.geneontol...
GO GO:0043231 View Gene Set 1.16e-46 8376 1.937e-43 7 intracellular membrane-bounded organelle amigo.geneontol...
GO GO:0090304 View Gene Set 4.082e-44 3724 6.059e-41 9 nucleic acid metabolic process amigo.geneontol...
GO GO:0003676 View Gene Set 1.504e-42 2979 2.009e-39 10 nucleic acid binding amigo.geneontol...
GO GO:0044260 View Gene Set 5.348e-42 5699 6.495e-39 11 cellular macromolecule metabolic process amigo.geneontol...
GO GO:0006396 View Gene Set 5.639e-41 578 6.278e-38 12 RNA processing amigo.geneontol...
GO GO:0043229 View Gene Set 7.157e-37 9346 7.356e-34 13 intracellular organelle amigo.geneontol...
GO GO:0043226 View Gene Set 1.519e-36 9360 1.449e-33 14 organelle amigo.geneontol...
GO GO:0006139 View Gene Set 6.376e-35 4294 5.679e-32 15 nucleobase nucleoside nucleotide and nucleic acid metabolic process amigo.geneontol...
GO GO:0003723 View Gene Set 6.15e-34 732 5.135e-31 16 RNA binding amigo.geneontol...
GO GO:0005654 View Gene Set 2.383e-33 939 1.873e-30 17 nucleoplasm amigo.geneontol...
GO GO:0010467 View Gene Set 5.083e-33 3806 3.772e-30 18 gene expression amigo.geneontol...
GO GO:0043170 View Gene Set 6.833e-31 6274 4.805e-28 19 macromolecule metabolic process amigo.geneontol...
GO GO:0044424 View Gene Set 2.858e-30 10976 1.909e-27 20 intracellular part amigo.geneontol...
GO GO:0034641 View Gene Set 5.064e-30 4584 3.222e-27 21 cellular nitrogen compound metabolic process amigo.geneontol...
GO GO:0005622 View Gene Set 6.285e-29 11329 3.817e-26 22 intracellular amigo.geneontol...
GO GO:0008380 View Gene Set 2.04e-28 300 1.185e-25 23 RNA splicing amigo.geneontol...
GO GO:0006807 View Gene Set 2.269e-28 4698 1.263e-25 24 nitrogen compound metabolic process amigo.geneontol...
GO GO:0044446 View Gene Set 1.074e-27 5019 5.737e-25 25 intracellular organelle part amigo.geneontol...
GO GO:0005730 View Gene Set 6.912e-27 734 3.552e-24 26 nucleolus amigo.geneontol...
GO GO:0016071 View Gene Set 4.294e-26 381 2.125e-23 27 mRNA metabolic process amigo.geneontol...
GO GO:0044422 View Gene Set 6.752e-26 5089 3.221e-23 28 organelle part amigo.geneontol...
GO GO:0006397 View Gene Set 9.341e-26 317 4.303e-23 29 mRNA processing amigo.geneontol...
GO GO:0044237 View Gene Set 2.593e-23 7431 1.155e-20 30 cellular metabolic process amigo.geneontol...
GO GO:0030529 View Gene Set 8.171e-23 504 3.522e-20 31 ribonucleoprotein complex amigo.geneontol...
GO GO:0016070 View Gene Set 2.756e-22 2596 1.151e-19 32 RNA metabolic process amigo.geneontol...
GO GO:0005694 View Gene Set 9.459e-22 507 3.829e-19 33 chromosome amigo.geneontol...
GO GO:0034645 View Gene Set 1.506e-21 3529 5.919e-19 34 cellular macromolecule biosynthetic process amigo.geneontol...
GO GO:0044451 View Gene Set 5.082e-21 600 1.94e-18 35 nucleoplasm part amigo.geneontol...
GO GO:0009059 View Gene Set 3.049e-20 3597 1.132e-17 36 macromolecule biosynthetic process amigo.geneontol...
GO GO:0022613 View Gene Set 1.184e-19 194 4.274e-17 37 ribonucleoprotein complex biogenesis amigo.geneontol...
GO GO:0006259 View Gene Set 4.76e-19 592 1.673e-16 38 DNA metabolic process amigo.geneontol...
GO GO:0044427 View Gene Set 2.105e-17 420 7.21e-15 39 chromosomal part amigo.geneontol...
GO GO:0044238 View Gene Set 2.929e-16 7629 9.783e-14 40 primary metabolic process amigo.geneontol...
GO GO:0005681 View Gene Set 3.624e-16 135 1.181e-13 41 spliceosomal complex amigo.geneontol...
GO GO:0016604 View Gene Set 1.658e-15 198 5.273e-13 42 nuclear body amigo.geneontol...
GO GO:0043228 View Gene Set 2.07e-15 2690 6.285e-13 43 non-membrane-bounded organelle amigo.geneontol...
GO GO:0043232 View Gene Set 2.07e-15 2690 6.285e-13 43 intracellular non-membrane-bounded organelle amigo.geneontol...
GO GO:0000375 View Gene Set 3.497e-15 106 1.038e-12 45 RNA splicing via transesterification reactions amigo.geneontol...
GO GO:0008152 View Gene Set 4.98e-15 8439 1.446e-12 46 metabolic process amigo.geneontol...
GO GO:0006281 View Gene Set 1.859e-14 309 5.284e-12 47 DNA repair amigo.geneontol...
GO GO:0007049 View Gene Set 2.327e-14 1006 6.477e-12 48 cell cycle amigo.geneontol...
GO GO:0000775 View Gene Set 3.276e-14 146 8.767e-12 49 chromosome centromeric region amigo.geneontol...
GO GO:0032991 View Gene Set 3.281e-14 3237 8.767e-12 49 macromolecular complex amigo.geneontol...
GO GO:0044249 View Gene Set 5.572e-14 4326 1.46e-11 51 cellular biosynthetic process amigo.geneontol...
GO GO:0034470 View Gene Set 7.773e-14 193 1.997e-11 52 ncRNA processing amigo.geneontol...
GO GO:0000377 View Gene Set 6.062e-13 97 1.5e-10 53 RNA splicing via transesterification reactions with bulged adenosine as nucleophile amigo.geneontol...
GO GO:0000398 View Gene Set 6.062e-13 97 1.5e-10 53 nuclear mRNA splicing via spliceosome amigo.geneontol...
GO GO:0009058 View Gene Set 7.298e-13 4436 1.773e-10 55 biosynthetic process amigo.geneontol...
GO GO:0051276 View Gene Set 1.685e-12 548 4.02e-10 56 chromosome organization amigo.geneontol...
GO GO:0000793 View Gene Set 2.696e-12 136 6.319e-10 57 condensed chromosome amigo.geneontol...
GO GO:0034660 View Gene Set 3.214e-12 236 7.403e-10 58 ncRNA metabolic process amigo.geneontol...
GO GO:0006974 View Gene Set 4.384e-12 412 9.927e-10 59 response to DNA damage stimulus amigo.geneontol...
GO GO:0000278 View Gene Set 6.067e-12 489 1.351e-09 60 mitotic cell cycle amigo.geneontol...
GO GO:0060255 View Gene Set 6.996e-12 3411 1.532e-09 61 regulation of macromolecule metabolic process amigo.geneontol...
GO GO:0044265 View Gene Set 1.229e-11 479 2.647e-09 62 cellular macromolecule catabolic process amigo.geneontol...
GO GO:0022402 View Gene Set 1.47e-11 676 3.116e-09 63 cell cycle process amigo.geneontol...
GO GO:0022618 View Gene Set 1.602e-11 76 3.323e-09 64 ribonucleoprotein complex assembly amigo.geneontol...
GO GO:0042254 View Gene Set 1.617e-11 130 3.323e-09 64 ribosome biogenesis amigo.geneontol...
GO GO:0006260 View Gene Set 2.566e-11 239 5.194e-09 66 DNA replication amigo.geneontol...
GO GO:0070647 View Gene Set 3.076e-11 356 6.133e-09 67 protein modification by small protein conjugation or removal amigo.geneontol...
GO GO:0010556 View Gene Set 3.206e-11 2901 6.299e-09 68 regulation of macromolecule biosynthetic process amigo.geneontol...
GO GO:0010468 View Gene Set 4.634e-11 2958 8.972e-09 69 regulation of gene expression amigo.geneontol...
GO GO:0006511 View Gene Set 6.195e-11 296 1.182e-08 70 ubiquitin-dependent protein catabolic process amigo.geneontol...
GO GO:0000279 View Gene Set 6.756e-11 406 1.254e-08 71 M phase amigo.geneontol...
GO GO:0022403 View Gene Set 6.706e-11 522 1.254e-08 71 cell cycle phase amigo.geneontol...
GO GO:0005739 View Gene Set 1.074e-10 1274 1.966e-08 73 mitochondrion amigo.geneontol...
GO GO:0050657 View Gene Set 1.256e-10 102 2.208e-08 74 nucleic acid transport amigo.geneontol...
GO GO:0050658 View Gene Set 1.256e-10 102 2.208e-08 74 RNA transport amigo.geneontol...
GO GO:0051236 View Gene Set 1.256e-10 102 2.208e-08 74 establishment of RNA localization amigo.geneontol...
GO GO:0006261 View Gene Set 1.595e-10 74 2.767e-08 77 DNA-dependent DNA replication amigo.geneontol...
GO GO:0003677 View Gene Set 1.774e-10 2028 3.039e-08 78 DNA binding amigo.geneontol...
GO GO:0051028 View Gene Set 1.888e-10 90 3.193e-08 79 mRNA transport amigo.geneontol...
GO GO:0019941 View Gene Set 2.454e-10 302 4.048e-08 80 modification-dependent protein catabolic process amigo.geneontol...
GO GO:0043632 View Gene Set 2.454e-10 302 4.048e-08 80 modification-dependent macromolecule catabolic process amigo.geneontol...
GO GO:0000776 View Gene Set 3.665e-10 92 5.971e-08 82 kinetochore amigo.geneontol...
GO GO:0006403 View Gene Set 4.014e-10 104 6.462e-08 83 RNA localization amigo.geneontol...
GO GO:0000779 View Gene Set 5.766e-10 79 9.171e-08 84 condensed chromosome centromeric region amigo.geneontol...
GO GO:0000087 View Gene Set 9.536e-10 286 1.499e-07 85 M phase of mitotic cell cycle amigo.geneontol...
GO GO:0006350 View Gene Set 1.715e-09 2744 2.665e-07 86 transcription amigo.geneontol...
GO GO:0051301 View Gene Set 1.788e-09 358 2.714e-07 87 cell division amigo.geneontol...
GO GO:0000777 View Gene Set 1.769e-09 74 2.714e-07 87 condensed chromosome kinetochore amigo.geneontol...
GO GO:0032446 View Gene Set 1.956e-09 310 2.936e-07 89 protein modification by small protein conjugation amigo.geneontol...
GO GO:0048285 View Gene Set 1.997e-09 286 2.964e-07 90 organelle fission amigo.geneontol...
GO GO:0016607 View Gene Set 2.614e-09 116 3.837e-07 91 nuclear speck amigo.geneontol...
GO GO:0000280 View Gene Set 3.003e-09 276 4.314e-07 92 nuclear division amigo.geneontol...
GO GO:0007067 View Gene Set 3.003e-09 276 4.314e-07 92 mitosis amigo.geneontol...
GO GO:0006996 View Gene Set 5.075e-09 1501 7.213e-07 94 organelle organization amigo.geneontol...
GO GO:0006412 View Gene Set 5.642e-09 412 7.935e-07 95 translation amigo.geneontol...
GO GO:0009057 View Gene Set 7.172e-09 570 9.981e-07 96 macromolecule catabolic process amigo.geneontol...
GO GO:0016567 View Gene Set 7.7e-09 286 1.061e-06 97 protein ubiquitination amigo.geneontol...
GO GO:0043566 View Gene Set 1.056e-08 149 1.44e-06 98 structure-specific DNA binding amigo.geneontol...
GO GO:0016874 View Gene Set 2.241e-08 436 3.024e-06 99 ligase activity amigo.geneontol...
GO GO:0044257 View Gene Set 2.89e-08 349 3.825e-06 100 cellular protein catabolic process amigo.geneontol...
GO GO:0005819 View Gene Set 2.892e-08 167 3.825e-06 100 spindle amigo.geneontol...
GO GO:0051603 View Gene Set 2.954e-08 346 3.869e-06 102 proteolysis involved in cellular protein catabolic process amigo.geneontol...
GO GO:0045449 View Gene Set 3.389e-08 2647 4.395e-06 103 regulation of transcription amigo.geneontol...
GO GO:0006399 View Gene Set 4.073e-08 118 5.232e-06 104 tRNA metabolic process amigo.geneontol...
GO GO:0031326 View Gene Set 5.174e-08 3048 6.583e-06 105 regulation of cellular biosynthetic process amigo.geneontol...
GO GO:0000245 View Gene Set 6.282e-08 34 7.843e-06 106 spliceosome assembly amigo.geneontol...
GO GO:0043161 View Gene Set 6.26e-08 162 7.843e-06 106 proteasomal ubiquitin-dependent protein catabolic process amigo.geneontol...
GO GO:0015931 View Gene Set 6.856e-08 118 8.481e-06 108 nucleobase nucleoside nucleotide and nucleic acid transport amigo.geneontol...
GO GO:0007059 View Gene Set 7.31e-08 94 8.96e-06 109 chromosome segregation amigo.geneontol...
GO GO:0016879 View Gene Set 9.097e-08 273 1.105e-05 110 ligase activity forming carbon-nitrogen bonds amigo.geneontol...
GO GO:0009889 View Gene Set 9.802e-08 3070 1.18e-05 111 regulation of biosynthetic process amigo.geneontol...
GO GO:0000228 View Gene Set 1.023e-07 177 1.221e-05 112 nuclear chromosome amigo.geneontol...
GO GO:0010498 View Gene Set 1.246e-07 166 1.473e-05 113 proteasomal protein catabolic process amigo.geneontol...
GO GO:0030163 View Gene Set 1.307e-07 398 1.531e-05 114 protein catabolic process amigo.geneontol...
GO GO:0006325 View Gene Set 1.409e-07 425 1.636e-05 115 chromatin organization amigo.geneontol...
GO GO:0044429 View Gene Set 1.679e-07 619 1.934e-05 116 mitochondrial part amigo.geneontol...
GO GO:0006364 View Gene Set 2.179e-07 97 2.488e-05 117 rRNA processing amigo.geneontol...
GO GO:0031145 View Gene Set 2.602e-07 64 2.934e-05 118 anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process amigo.geneontol...
GO GO:0080090 View Gene Set 2.613e-07 3585 2.934e-05 118 regulation of primary metabolic process amigo.geneontol...
GO GO:0000123 View Gene Set 2.67e-07 50 2.973e-05 120 histone acetyltransferase complex amigo.geneontol...
GO GO:0051439 View Gene Set 2.829e-07 68 3.124e-05 121 regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle amigo.geneontol...
GO GO:0051436 View Gene Set 3.019e-07 62 3.306e-05 122 negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle amigo.geneontol...
GO GO:0000502 View Gene Set 3.287e-07 63 3.57e-05 123 proteasome complex amigo.geneontol...
GO GO:0016072 View Gene Set 3.322e-07 101 3.579e-05 124 rRNA metabolic process amigo.geneontol...
GO GO:0031396 View Gene Set 4.404e-07 121 4.707e-05 125 regulation of protein ubiquitination amigo.geneontol...
GO GO:0051351 View Gene Set 4.462e-07 74 4.731e-05 126 positive regulation of ligase activity amigo.geneontol...
GO GO:0051340 View Gene Set 4.648e-07 85 4.89e-05 127 regulation of ligase activity amigo.geneontol...
GO GO:0015030 View Gene Set 4.829e-07 43 5.04e-05 128 Cajal body amigo.geneontol...
GO GO:0031967 View Gene Set 5.634e-07 672 5.835e-05 129 organelle envelope amigo.geneontol...
GO GO:0008033 View Gene Set 5.753e-07 78 5.912e-05 130 tRNA processing amigo.geneontol...
GO GO:0031397 View Gene Set 6.066e-07 78 6.186e-05 131 negative regulation of protein ubiquitination amigo.geneontol...
GO GO:0031398 View Gene Set 6.847e-07 95 6.93e-05 132 positive regulation of protein ubiquitination amigo.geneontol...
GO GO:0051352 View Gene Set 9.94e-07 66 9.911e-05 133 negative regulation of ligase activity amigo.geneontol...
GO GO:0051444 View Gene Set 9.94e-07 66 9.911e-05 133 negative regulation of ubiquitin-protein ligase activity amigo.geneontol...
GO GO:0071103 View Gene Set 1.116e-06 140 0.0001104 135 DNA conformation change amigo.geneontol...
GO GO:0044267 View Gene Set 1.204e-06 2465 0.0001183 136 cellular protein metabolic process amigo.geneontol...
GO GO:0051437 View Gene Set 1.255e-06 64 0.0001224 137 positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle amigo.geneontol...
GO GO:0008168 View Gene Set 1.273e-06 176 0.0001233 138 methyltransferase activity amigo.geneontol...
GO GO:0000075 View Gene Set 1.403e-06 109 0.0001338 139 cell cycle checkpoint amigo.geneontol...
GO GO:0003690 View Gene Set 1.394e-06 99 0.0001338 139 double-stranded DNA binding amigo.geneontol...
GO GO:0016568 View Gene Set 1.502e-06 324 0.0001424 141 chromatin modification amigo.geneontol...
GO GO:0003743 View Gene Set 1.607e-06 52 0.0001512 142 translation initiation factor activity amigo.geneontol...
GO GO:0016881 View Gene Set 1.663e-06 245 0.0001553 143 acid-amino acid ligase activity amigo.geneontol...
GO GO:0034621 View Gene Set 1.683e-06 458 0.0001561 144 cellular macromolecular complex subunit organization amigo.geneontol...
GO GO:0051438 View Gene Set 1.882e-06 82 0.0001734 145 regulation of ubiquitin-protein ligase activity amigo.geneontol...
GO GO:0051443 View Gene Set 1.914e-06 71 0.0001751 146 positive regulation of ubiquitin-protein ligase activity amigo.geneontol...
GO GO:0016741 View Gene Set 2.044e-06 179 0.0001858 147 transferase activity transferring one-carbon groups amigo.geneontol...
GO GO:0019219 View Gene Set 2.27e-06 3040 0.0002049 148 regulation of nucleobase nucleoside nucleotide and nucleic acid metabolic process amigo.geneontol...
GO GO:0000785 View Gene Set 3.139e-06 213 0.0002815 149 chromatin amigo.geneontol...
GO GO:0005759 View Gene Set 3.254e-06 223 0.0002879 150 mitochondrial matrix amigo.geneontol...
GO GO:0031980 View Gene Set 3.254e-06 223 0.0002879 150 mitochondrial lumen amigo.geneontol...
GO GO:0040029 View Gene Set 3.676e-06 95 0.0003231 152 regulation of gene expression epigenetic amigo.geneontol...
GO GO:0003697 View Gene Set 4.155e-06 58 0.0003628 153 single-stranded DNA binding amigo.geneontol...
GO GO:0031323 View Gene Set 5.284e-06 3768 0.0004584 154 regulation of cellular metabolic process amigo.geneontol...
GO GO:0019787 View Gene Set 5.425e-06 210 0.0004676 155 small conjugating protein ligase activity amigo.geneontol...
GO GO:0031975 View Gene Set 5.582e-06 685 0.0004781 156 envelope amigo.geneontol...
GO GO:0006457 View Gene Set 6.005e-06 172 0.000511 157 protein folding amigo.geneontol...
GO GO:0000070 View Gene Set 6.712e-06 37 0.0005675 158 mitotic sister chromatid segregation amigo.geneontol...
GO GO:0000819 View Gene Set 7.243e-06 38 0.0006086 159 sister chromatid segregation amigo.geneontol...
GO GO:0006405 View Gene Set 7.457e-06 44 0.0006226 160 RNA export from nucleus amigo.geneontol...
GO GO:0006417 View Gene Set 8.233e-06 151 0.0006832 161 regulation of translation amigo.geneontol...
GO GO:0006376 View Gene Set 8.995e-06 15 0.0007418 162 mRNA splice site selection amigo.geneontol...
GO GO:0000922 View Gene Set 9.435e-06 63 0.0007733 163 spindle pole amigo.geneontol...
GO GO:0034622 View Gene Set 1.059e-05 393 0.0008625 164 cellular macromolecular complex assembly amigo.geneontol...
GO GO:0051171 View Gene Set 1.184e-05 3066 0.0009584 165 regulation of nitrogen compound metabolic process amigo.geneontol...
GO GO:0019866 View Gene Set 1.206e-05 334 0.000971 166 organelle inner membrane amigo.geneontol...
GO GO:0005876 View Gene Set 1.632e-05 35 0.001306 167 spindle microtubule amigo.geneontol...
GO GO:0010608 View Gene Set 1.813e-05 247 0.001442 168 posttranscriptional regulation of gene expression amigo.geneontol...
GO GO:0007051 View Gene Set 1.874e-05 57 0.001482 169 spindle organization amigo.geneontol...
GO GO:0003712 View Gene Set 1.89e-05 364 0.001486 170 transcription cofactor activity amigo.geneontol...
GO GO:0008134 View Gene Set 1.941e-05 525 0.001516 171 transcription factor binding amigo.geneontol...
GO GO:0008270 View Gene Set 1.953e-05 2009 0.001517 172 zinc ion binding amigo.geneontol...
GO GO:0000794 View Gene Set 2.109e-05 52 0.001629 173 condensed nuclear chromosome amigo.geneontol...
GO GO:0044455 View Gene Set 2.153e-05 133 0.001653 174 mitochondrial membrane part amigo.geneontol...
GO GO:0000151 View Gene Set 2.174e-05 132 0.00166 175 ubiquitin ligase complex amigo.geneontol...
GO GO:0004386 View Gene Set 2.297e-05 144 0.001743 176 helicase activity amigo.geneontol...
GO GO:0019222 View Gene Set 2.475e-05 4060 0.001868 177 regulation of metabolic process amigo.geneontol...
GO GO:0006220 View Gene Set 2.884e-05 37 0.002165 178 pyrimidine nucleotide metabolic process amigo.geneontol...
GO GO:0016591 View Gene Set 4.026e-05 77 0.003005 179 DNA-directed RNA polymerase II holoenzyme amigo.geneontol...
GO GO:0016226 View Gene Set 4.097e-05 10 0.003024 180 iron-sulfur cluster assembly amigo.geneontol...
GO GO:0031163 View Gene Set 4.097e-05 10 0.003024 180 metallo-sulfur cluster assembly amigo.geneontol...
GO GO:0005643 View Gene Set 4.247e-05 71 0.003118 182 nuclear pore amigo.geneontol...
GO GO:0006367 View Gene Set 4.316e-05 75 0.003151 183 transcription initiation from RNA polymerase II promoter amigo.geneontol...
GO GO:0000226 View Gene Set 4.439e-05 178 0.003223 184 microtubule cytoskeleton organization amigo.geneontol...
GO GO:0044454 View Gene Set 5.654e-05 139 0.004083 185 nuclear chromosome part amigo.geneontol...
GO GO:0031080 View Gene Set 5.697e-05 10 0.004092 186 Nup107-160 complex amigo.geneontol...
GO GO:0009295 View Gene Set 5.797e-05 31 0.004119 187 nucleoid amigo.geneontol...
GO GO:0042645 View Gene Set 5.797e-05 31 0.004119 187 mitochondrial nucleoid amigo.geneontol...
GO GO:0004842 View Gene Set 6.616e-05 191 0.004676 189 ubiquitin-protein ligase activity amigo.geneontol...
GO GO:0000152 View Gene Set 6.69e-05 27 0.004704 190 nuclear ubiquitin ligase complex amigo.geneontol...
GO GO:0005487 View Gene Set 7.179e-05 8 0.005022 191 nucleocytoplasmic transporter activity amigo.geneontol...
GO GO:0044452 View Gene Set 7.309e-05 28 0.005086 192 nucleolar part amigo.geneontol...
GO GO:0006413 View Gene Set 7.892e-05 62 0.005463 193 translational initiation amigo.geneontol...
GO GO:0043968 View Gene Set 8.153e-05 12 0.005614 194 histone H2A acetylation amigo.geneontol...
GO GO:0003713 View Gene Set 8.303e-05 215 0.005689 195 transcription coactivator activity amigo.geneontol...
GO GO:0008170 View Gene Set 8.5e-05 58 0.005794 196 N-methyltransferase activity amigo.geneontol...
GO GO:0031570 View Gene Set 8.567e-05 63 0.00581 197 DNA integrity checkpoint amigo.geneontol...
GO GO:0030521 View Gene Set 8.919e-05 47 0.006018 198 androgen receptor signaling pathway amigo.geneontol...
GO GO:0006401 View Gene Set 9.019e-05 74 0.006043 199 RNA catabolic process amigo.geneontol...
GO GO:0010605 View Gene Set 9.091e-05 827 0.006043 199 negative regulation of macromolecule metabolic process amigo.geneontol...

Gene Set Collection: Broad.c1.CYTOBAND

Arguments: refPop=all, featureType=featureNames, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad chr2p22 View Gene Set 0.0005406 40 0.03888 1 Genes in cytogenetic band chr2p22 www.broad.mit.e...
Broad chr1p22 View Gene Set 0.0006073 84 0.03888 1 Genes in cytogenetic band chr1p22 www.broad.mit.e...
Broad chr3q22 View Gene Set 0.0006488 47 0.03888 1 Genes in cytogenetic band chr3q22 www.broad.mit.e...
Broad chr13q12 View Gene Set 0.0001501 104 0.03888 1 Genes in cytogenetic band chr13q12 www.broad.mit.e...
Broad chr5q11 View Gene Set 0.0004844 43 0.03888 1 Genes in cytogenetic band chr5q11 www.broad.mit.e...
Broad chr18p11 View Gene Set 0.0007155 107 0.03888 1 Genes in cytogenetic band chr18p11 www.broad.mit.e...

Gene Set Collection: Broad.c2.CGP

Arguments: refPop=all, featureType=featureNames, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad DODD_NASOPHARYNGEAL_CARCINOMA_DN View Gene Set 1.919e-78 1253 4.59e-75 1 Genes down-regulated in nasopharyngeal carcinoma (NPC) compared to the normal tissue. www.broad.mit.e...
Broad DACOSTA_UV_RESPONSE_VIA_ERCC3_DN View Gene Set 4.341e-70 825 5.192e-67 2 Genes down-regulated in fibroblasts expressing mutant forms of ERCC3 [Gene ID=2071] after UV irradiation. www.broad.mit.e...
Broad PUJANA_CHEK2_PCC_NETWORK View Gene Set 8.148e-66 744 6.496e-63 3 Genes constituting the CHEK2-PCC network of transcripts whose expression positively correlates (Pearson correlation coefficient PCC >= 0.4) with that of CHEK2 [Gene ID=11200]. www.broad.mit.e...
Broad TIEN_INTESTINE_PROBIOTICS_24HR_UP View Gene Set 1.348e-60 537 8.06e-58 4 Genes up-regulated in Caco-2 cells (intestinal epithelium) after coculture with the probiotic bacteria L. casei for 24h. www.broad.mit.e...
Broad PUJANA_BRCA1_PCC_NETWORK View Gene Set 6.116e-51 1582 2.926e-48 5 Genes constituting the BRCA1-PCC network of transcripts whose expression positively correlated (Pearson correlation coefficient PCC >= 0.4) with that of BRCA1 [Gene ID=672] across a compendium of normal tissues. www.broad.mit.e...
Broad DACOSTA_UV_RESPONSE_VIA_ERCC3_COMMON_DN View Gene Set 6.201e-50 418 2.472e-47 6 Common down-regulated transcripts in fibroblasts expressing either XP/CS or TDD mutant forms of ERCC3 [Gene ID=2071] after UVC irradiation. www.broad.mit.e...
Broad SHEN_SMARCA2_TARGETS_UP View Gene Set 1.196e-43 406 4.086e-41 7 Genes whose expression positively correlated with that of SMARCA2 [Gene ID=6595] in prostate cancer samples. www.broad.mit.e...
Broad KINSEY_TARGETS_OF_EWSR1_FLII_FUSION_UP View Gene Set 1.511e-40 1180 4.518e-38 8 Genes up-regulated in TC71 and EWS502 cells (Ewing's sarcoma) upon knockdown of the EWSR1-FLII fusion [Gene ID=2130 2314]. www.broad.mit.e...
Broad MILI_PSEUDOPODIA_HAPTOTAXIS_UP View Gene Set 1.036e-39 452 2.753e-37 9 Transcripts enriched in pseudopodia of NIH/3T3 cells (fibroblast) in response to haptotactic migratory stimulus by fibronectin FN1 [Gene ID=2335]. www.broad.mit.e...
Broad CAIRO_HEPATOBLASTOMA_CLASSES_UP View Gene Set 3.897e-36 577 9.322e-34 10 Genes up-regulated in robust Cluster 2 (rC2) of hepatoblastoma samples compared to those in the robust Cluster 1 (rC1). www.broad.mit.e...
Broad RODRIGUES_THYROID_CARCINOMA_POORLY_DIFFERENTIATED_UP View Gene Set 2.602e-35 589 5.657e-33 11 Genes up-regulated in poorly differentiated thyroid carcinoma (PDTC) compared to normal thyroid tissue. www.broad.mit.e...
Broad DAZARD_RESPONSE_TO_UV_NHEK_DN View Gene Set 5.293e-35 256 1.055e-32 12 Genes down-regulated in NHEK cells (normal keratinocytes) by UV-B irradiation. www.broad.mit.e...
Broad GARY_CD5_TARGETS_DN View Gene Set 4.287e-34 415 7.889e-32 13 Genes down-regulated in Daudi cells (B lymphocytes) stably expressing CD5 [Gene ID=921] off a plasmid vector. www.broad.mit.e...
Broad SHEDDEN_LUNG_CANCER_POOR_SURVIVAL_A6 View Gene Set 1.386e-31 435 2.368e-29 14 Cluster 6 of method A: up-regulation of these genes in patients with non???small cell lung cancer (NSCLC) predicts poor survival outcome. www.broad.mit.e...
Broad WEI_MYCN_TARGETS_WITH_E_BOX View Gene Set 1.163e-30 757 1.855e-28 15 Genes whose promoters contain E-box motifs and whose expression changed in MYCN-3 cells (neuroblastoma) upon induction of MYCN [Gene ID=4613]. www.broad.mit.e...
Broad CHEN_HOXA5_TARGETS_9HR_UP View Gene Set 1.401e-29 210 2.094e-27 16 Differentially expressed genes 9 hr after tinduction of HoxA5 [Gene ID=3205] expression in a breast cancer cell line. www.broad.mit.e...
Broad DIAZ_CHRONIC_MEYLOGENOUS_LEUKEMIA_UP View Gene Set 1.235e-28 1353 1.737e-26 17 Genes up-regulated in CD34+ [Gene ID=947] cells isolated from bone marrow of CML (chronic myelogenous leukemia) patients compared to those from normal donors. www.broad.mit.e...
Broad BERENJENO_TRANSFORMED_BY_RHOA_UP View Gene Set 1.843e-28 485 2.45e-26 18 Genes up-regulated in NIH3T3 cells (fibroblasts) transformed by expression of contitutively active (Q63L) form of RHOA [Gene ID=387] off plasmid vector. www.broad.mit.e...
Broad KIM_WT1_TARGETS_DN View Gene Set 2.658e-27 431 3.347e-25 19 Genes down-regulated in UB27 cells (osteosarcoma) at any time point after inducing the expression of a mutant form of WT1 [Gene ID=7490]. www.broad.mit.e...
Broad MANALO_HYPOXIA_DN View Gene Set 1.274e-25 276 1.524e-23 20 Genes down-regulated in response to both hypoxia and overexpression of an active form of HIF1A [Gene ID=3091]. www.broad.mit.e...
Broad PUJANA_BRCA2_PCC_NETWORK View Gene Set 2.252e-25 410 2.566e-23 21 Genes constituting the BRCA2-PCC network of transcripts whose expression positively correlated (Pearson correlation coefficient PCC >= 0.4) with that of BRCA2 [Gene ID=675] across a compendium of normal tissues. www.broad.mit.e...
Broad ZHANG_BREAST_CANCER_PROGENITORS_UP View Gene Set 4.726e-25 370 5.138e-23 22 Genes changed in cancer stem cells isolated from mammary tumors compared to the non-tumorigenic cells. www.broad.mit.e...
Broad BENPORATH_CYCLING_GENES View Gene Set 1.36e-24 630 1.415e-22 23 Genes showing cell-cycle stage-specific expression [PMID=12058064]. www.broad.mit.e...
Broad WONG_EMBRYONIC_STEM_CELL_CORE View Gene Set 1.528e-24 331 1.523e-22 24 The 'core ESC-like gene module': genes coordinately up-regulated in a compendium of mouse embryonic stem cells (ESC) which are shared with the human ESC-like module. www.broad.mit.e...
Broad ENK_UV_RESPONSE_KERATINOCYTE_DN View Gene Set 3.388e-24 475 3.242e-22 25 Genes down-regulated in NHEK cells (normal epidermal keratinocytes) after UVB irradiation. www.broad.mit.e...
Broad GRAHAM_CML_DIVIDING_VS_NORMAL_QUIESCENT_UP View Gene Set 1.542e-23 180 1.419e-21 26 Genes up-regulated in quiescent CD34+ [Gene ID=8842] cells isolated from peripheral blood of normal donors compared to the dividing cells from CML (chronic myeloid leukemia) patients. www.broad.mit.e...
Broad BOYAULT_LIVER_CANCER_SUBCLASS_G3_UP View Gene Set 1.133e-22 184 1.003e-20 27 Up-regulated genes in hepatocellular carcinoma (HCC) subclass G3 defined by unsupervised clustering. www.broad.mit.e...
Broad KOBAYASHI_EGFR_SIGNALING_24HR_DN View Gene Set 2.749e-22 243 2.349e-20 28 Genes down-regulated in H1975 cells (non-small cell lung cancer NSCLC) resistant to gefitinib [PubChem=123631] after treatment with EGFR inhibitor CL-387785 [PubChem=2776] for 24h. www.broad.mit.e...
Broad MOREAUX_MULTIPLE_MYELOMA_BY_TACI_DN View Gene Set 5.803e-22 121 4.787e-20 29 Genes distinguishing in multiple myeloma (MM) samples with lower expression of TACI [Gene ID=23495]. www.broad.mit.e...
Broad PUJANA_XPRSS_INT_NETWORK View Gene Set 9.7e-22 164 7.734e-20 30 Genes constituting the XPRSS-Int network: intersection of genes whose expression correlates with BRCA1 BRCA2 ATM and CHEK2 [Gene ID=672 675 472 11200] in a compendium of normal tissues. www.broad.mit.e...
Broad RODRIGUES_THYROID_CARCINOMA_ANAPLASTIC_UP View Gene Set 1.139e-21 681 8.789e-20 31 Genes up-regulated in anaplastic thyroid carcinoma (ATC) compared to normal thyroid tissue. www.broad.mit.e...
Broad TIEN_INTESTINE_PROBIOTICS_6HR_DN View Gene Set 3.031e-21 160 2.265e-19 32 Genes down-regulated in Caco-2 cells (intestinal epithelium) after coculture with the probiotic bacteria L. casei for 6h. www.broad.mit.e...
Broad WINNEPENNINCKX_MELANOMA_METASTASIS_UP View Gene Set 2.758e-20 152 1.999e-18 33 Genes from the 254-gene classifier which were up-regulated in melanoma patients with a reported distant metastasis within 4 years. www.broad.mit.e...
Broad ROSTY_CERVICAL_CANCER_PROLIFERATION_CLUSTER View Gene Set 2.96e-20 138 2.082e-18 34 The 'Cervical Cancer Proliferation Cluster' (CCPC): genes whose expression in cervical carcinoma positively correlates with that of the HPV E6 and E7 oncogenes; they are also differentially expressed according to disease outcome. www.broad.mit.e...
Broad SCHLOSSER_MYC_TARGETS_REPRESSED_BY_SERUM View Gene Set 4.567e-20 154 3.121e-18 35 Cluster 7: genes up-regulated in B493-6 cells (B lymphocytes) by MYC [Gene ID=4609] and down-regulated by the combination of MYC and serum. www.broad.mit.e...
Broad NUYTTEN_EZH2_TARGETS_DN View Gene Set 9.259e-20 859 6.152e-18 36 Genes down-regulated in PC3 cells (prostate cancer) after knockdown of EZH2 [Gene ID=2146] by RNAi. www.broad.mit.e...
Broad KRIGE_RESPONSE_TO_TOSEDOSTAT_24HR_DN View Gene Set 1.776e-19 920 1.148e-17 37 Genes down-regulated in HL-60 cells (acute promyelocytic leukemia APL) after treatment with the aminopeptidase inhibitor tosedostat (CHR-2797) [PubChem=15547703] for 24 h. www.broad.mit.e...
Broad ACEVEDO_LIVER_CANCER_UP View Gene Set 8.433e-19 915 5.308e-17 38 Genes up-regulated in hepatocellular carcinoma (HCC) compared to normal liver samples. www.broad.mit.e...
Broad MUELLER_PLURINET View Gene Set 8.739e-19 294 5.36e-17 39 Genes constituting the PluriNet protein-protein network shared by the pluripotent cells (embryonic stem cells embryonical carcinomas and induced pluripotent cells). www.broad.mit.e...
Broad SOTIRIOU_BREAST_CANCER_GRADE_1_VS_3_UP View Gene Set 1.951e-18 143 1.167e-16 40 Up-regulated genes whose expression correlated with histologic grade of invasive breast cancer tumors: comparison of grade 1 vs grade 3. www.broad.mit.e...
Broad LINDGREN_BLADDER_CANCER_CLUSTER_3_UP View Gene Set 5.806e-18 314 3.387e-16 41 Genes whose expression profile is specific to Cluster III of urothelial cell carcinoma (UCC) tumors. www.broad.mit.e...
Broad GENTILE_UV_HIGH_DOSE_DN View Gene Set 1.47e-17 240 8.373e-16 42 Selected genes down-regulated in WS1 (fibroblast) in response to irradiation with high dose UV-C. www.broad.mit.e...
Broad BIDUS_METASTASIS_UP View Gene Set 2.9e-17 203 1.613e-15 43 Genes up-regulated in endometroid endometrial tumors from patients with lymph node metastases compared to those without the metastases. www.broad.mit.e...
Broad RUIZ_TNC_TARGETS_DN View Gene Set 3.649e-17 138 1.984e-15 44 Genes down-regulated in T98G cells (glioblastoma) by TNC [Gene ID=3371]. www.broad.mit.e...
Broad SCHLOSSER_SERUM_RESPONSE_DN View Gene Set 4.084e-17 666 2.171e-15 45 Cluster 4: genes down-regulated in B493-6 cells (B lymphocytes) upon serum stimulation but not affected by MYC [Gene ID=4609]. www.broad.mit.e...
Broad MARTINEZ_RESPONSE_TO_TRABECTEDIN_DN View Gene Set 6.854e-17 212 3.564e-15 46 Genes down-regulated in at least 8 of 11 sarcoma cell lines by trabectedin [PubChem=3199]. www.broad.mit.e...
Broad RHEIN_ALL_GLUCOCORTICOID_THERAPY_DN View Gene Set 8.428e-17 351 4.289e-15 47 Genes down-regulated in ALL (acute lymphoblastic leukemia) blasts after 1 week of treatment with glucocorticoids. www.broad.mit.e...
Broad DAZARD_UV_RESPONSE_CLUSTER_G6 View Gene Set 1.295e-16 122 6.455e-15 48 Cluster G6: genes increasingly down-regulated in NHEK cells (normal keratinocyte) after UV-B irradiation. www.broad.mit.e...
Broad ACEVEDO_LIVER_TUMOR_VS_NORMAL_ADJACENT_TISSUE_UP View Gene Set 1.361e-16 806 6.644e-15 49 Genes up-regulated in liver tumor compared to the normal adjacent tissue. www.broad.mit.e...
Broad PUJANA_ATM_PCC_NETWORK View Gene Set 1.436e-16 1375 6.872e-15 50 Genes constituting the ATM-PCC network of transcripts whose expression positively correlated (Pearson correlation coefficient PCC >= 0.4) with that of ATM [Gene ID=472] across a compendium of normal tissues. www.broad.mit.e...
Broad FOURNIER_ACINAR_DEVELOPMENT_LATE_2 View Gene Set 4.423e-16 265 2.075e-14 51 Genes identified by method 2 as coordinately down-regulated late in HMEC cells (mammary epithelium) during acinar development in vitro. www.broad.mit.e...
Broad ONKEN_UVEAL_MELANOMA_UP View Gene Set 7.995e-16 739 3.678e-14 52 Genes up-regulated in uveal melanoma: class 2 vs class 1 tumors. www.broad.mit.e...
Broad BASAKI_YBX1_TARGETS_UP View Gene Set 1.621e-15 279 7.314e-14 53 Genes up-regulated in SKOC-3 cells (ovarian cancer) after YB-1 (YBX1) [Gene ID=4904] knockdown by RNAi. www.broad.mit.e...
Broad TARTE_PLASMA_CELL_VS_PLASMABLAST_DN View Gene Set 3.079e-15 303 1.364e-13 54 Genes down-regulated in mature plasma cells compared with plasmablastic B lymphocytes. www.broad.mit.e...
Broad MITSIADES_RESPONSE_TO_APLIDIN_DN View Gene Set 1.56e-14 241 6.785e-13 55 Genes down-regulated in the MM1S cells (multiple myeloma) after treatment with aplidin [PubChem=44152164] a marine-derived compound with potential anti-cancer properties. www.broad.mit.e...
Broad WANG_SMARCE1_TARGETS_DN View Gene Set 1.708e-14 329 7.25e-13 56 Genes down-regulated in BT549 cells (breast cancer) by expression of SMARCE1 [Gene ID=6605] off a retroviral vector. www.broad.mit.e...
Broad DAZARD_RESPONSE_TO_UV_SCC_DN View Gene Set 1.728e-14 96 7.25e-13 56 Genes down-regulated in SCC12B2 cells (squamous cell carcinoma) by UV-B irradiation. www.broad.mit.e...
Broad BENPORATH_PROLIFERATION View Gene Set 2.092e-14 140 8.627e-13 58 Set 'Proliferation Cluster': genes defined in human breast tumor expression data. www.broad.mit.e...
Broad BUYTAERT_PHOTODYNAMIC_THERAPY_STRESS_UP View Gene Set 2.158e-14 783 8.749e-13 59 Genes up-regulated in T24 (bladder cancer) cells in response to the photodynamic therapy (PDT) stress. www.broad.mit.e...
Broad GEORGES_TARGETS_OF_MIR192_AND_MIR215 View Gene Set 4.786e-14 809 1.908e-12 60 Genes down-regulated in HCT116 cells (colon cancer) by expression of MIR192 or MIR215 [Gene ID=406967 406997] at 24 h. www.broad.mit.e...
Broad PUIFFE_INVASION_INHIBITED_BY_ASCITES_DN View Gene Set 5.17e-14 140 2.027e-12 61 Genes down-regulated in OV-90 cells (ovarian cancer) exposed to ascites which inhibited invasion. www.broad.mit.e...
Broad RAMALHO_STEMNESS_UP View Gene Set 5.994e-14 192 2.312e-12 62 Genes enriched in embryonic neural and hematopoietic stem cells. www.broad.mit.e...
Broad GRAHAM_NORMAL_QUIESCENT_VS_NORMAL_DIVIDING_DN View Gene Set 4.783e-13 86 1.816e-11 63 Genes down-regulated in quiescent vs dividing CD34+ [Gene ID=8842] cells isolated from peripheral blood of normal donors. www.broad.mit.e...
Broad SENGUPTA_NASOPHARYNGEAL_CARCINOMA_UP View Gene Set 6.662e-13 269 2.49e-11 64 Genes up-regulated in nsopharyngeal carcinoma relative to the normal tissue. www.broad.mit.e...
Broad GALE_APL_WITH_FLT3_MUTATED_UP View Gene Set 6.82e-13 52 2.51e-11 65 Genes up-regulated in acute promyelocytic leukemia (APL) patients with mutated FLT3 [Gene ID=2322]. www.broad.mit.e...
Broad DEBIASI_APOPTOSIS_BY_REOVIRUS_INFECTION_UP View Gene Set 7.909e-13 242 2.866e-11 66 Genes up-regulated in HEK293 cells (embryonic kidney) at 6 h 12 h or 24 h after infection with reovirus strain T3A (known as a strong inducer of apoptosis). www.broad.mit.e...
Broad KRIGE_RESPONSE_TO_TOSEDOSTAT_6HR_DN View Gene Set 9.32e-13 832 3.327e-11 67 Genes down-regulated in HL-60 cells (acute promyelocytic leukemia APL) after treatment with the aminopeptidase inhibitor tosedostat (CHR-2797) [PubChem=15547703] for 6 h. www.broad.mit.e...
Broad HORIUCHI_WTAP_TARGETS_DN View Gene Set 1.648e-12 289 5.799e-11 68 Genes down-regulated in primary endothelial cells (HUVEC) after knockdown of WTAP [Gene ID=9589] by RNAi. www.broad.mit.e...
Broad BENPORATH_MYC_MAX_TARGETS View Gene Set 2.548e-12 768 8.832e-11 69 Set 'Myc targets2': targets of c-Myc [Gene ID=4609] and Max [Gene ID=4149] identified by ChIP on chip in a Burkitt???s lymphoma cell line; overlap set. www.broad.mit.e...
Broad BENPORATH_ES_1 View Gene Set 3.493e-12 367 1.193e-10 70 Set 'ES exp1': genes overexpressed in human embryonic stem cells according to 5 or more out of 20 profiling studies. www.broad.mit.e...
Broad HAMAI_APOPTOSIS_VIA_TRAIL_UP View Gene Set 4.426e-12 328 1.491e-10 71 Genes up-regulated in T1 cells (primary melanoma sensitive to TRAIL [Gene ID=8743]) compared to G1 cells (metastatic melanoma resistant to TRAIL). www.broad.mit.e...
Broad PUJANA_BRCA_CENTERED_NETWORK View Gene Set 5.467e-12 92 1.816e-10 72 Genes constituting the BRCA-centered network (BCN). www.broad.mit.e...
Broad BLUM_RESPONSE_TO_SALIRASIB_DN View Gene Set 6.867e-12 332 2.25e-10 73 Selected genes down-regulated in response to the Ras inhibitor salirasib [PubChem=5469318] in a panel of cancer cell lines with constantly active HRAS [Gene ID=3265]. www.broad.mit.e...
Broad TIEN_INTESTINE_PROBIOTICS_2HR_DN View Gene Set 8.259e-12 85 2.632e-10 74 Genes down-regulated in Caco-2 cells (intestinal epithelium) after coculture with the probiotic bacteria L. casei for 2h. www.broad.mit.e...
Broad WEST_ADRENOCORTICAL_TUMOR_UP View Gene Set 8.363e-12 283 2.632e-10 74 Up-regulated genes in pediatric adrenocortical tumors (ACT) compared to the normal tissue. www.broad.mit.e...
Broad CROONQUIST_IL6_DEPRIVATION_DN View Gene Set 8.305e-12 80 2.632e-10 74 Genes down-regulated in the ANBL-6 cell line (multiple myeloma MM) after withdrawal of IL6 [Gene ID=3569]. www.broad.mit.e...
Broad ZHONG_RESPONSE_TO_AZACITIDINE_AND_TSA_DN View Gene Set 8.937e-12 61 2.776e-10 77 Genes down-regulated in 3 out of 4 NSCLC cell lines (non-small cell lung cancer) after treatment with azacitidine [PubChem=9444] and TSA [PubChem=5562]. www.broad.mit.e...
Broad NAKAMURA_TUMOR_ZONE_PERIPHERAL_VS_CENTRAL_UP View Gene Set 9.859e-12 263 3.024e-10 78 Up-regulated genes in peripheral zone of human pancreatic cancer growing in the pancreas of nude mice compared to that of the tumor from the central zone. www.broad.mit.e...
Broad LI_WILMS_TUMOR_VS_FETAL_KIDNEY_1_DN View Gene Set 1.063e-11 158 3.217e-10 79 Genes down-regulated in Wilm's tumor samples compared to fetal kidney. www.broad.mit.e...
Broad VECCHI_GASTRIC_CANCER_EARLY_UP View Gene Set 3.077e-11 408 9.201e-10 80 Up-regulated genes distinguishing between early gastric cancer (EGC) and normal tissue samples. www.broad.mit.e...
Broad NUYTTEN_NIPP1_TARGETS_UP View Gene Set 4.035e-11 657 1.192e-09 81 Genes up-regulated in PC3 cells (prostate cancer) after knockdown of NIPP1 [Gene ID=5511] by RNAi. www.broad.mit.e...
Broad PUJANA_BREAST_CANCER_WITH_BRCA1_MUTATED_UP View Gene Set 4.098e-11 53 1.195e-09 82 The XPRSS-Int network genes up-regulated in breast tumors from patients with germline mutations in BRCA1 [Gene ID=672] compared to those with the wild type allele. www.broad.mit.e...
Broad CROONQUIST_NRAS_SIGNALING_DN View Gene Set 5.23e-11 62 1.507e-09 83 Genes down-regulated in ANBL-6 cell line (multiple myeloma MM) expressing a constantly active form of NRAS [Gene ID=4893] off a plasmid vector compared to those grown in the presence of IL6 [Gene ID=3569]. www.broad.mit.e...
Broad KAUFFMANN_DNA_REPAIR_GENES View Gene Set 5.331e-11 205 1.518e-09 84 Genes involved in DNA repair compiled manually by the authors. www.broad.mit.e...
Broad MARKEY_RB1_ACUTE_LOF_DN View Gene Set 5.971e-11 201 1.68e-09 85 Genes down-regulated in adult fibroblasts with inactivated RB1 [Gene ID=5925] by Cre-lox: acute loss of function (LOF) of RB1. www.broad.mit.e...
Broad BUYTAERT_PHOTODYNAMIC_THERAPY_STRESS_DN View Gene Set 6.406e-11 599 1.782e-09 86 Genes down-regulated in T24 (bladder cancer) cells in response to the photodynamic therapy (PDT) stress. www.broad.mit.e...
Broad FERREIRA_EWINGS_SARCOMA_UNSTABLE_VS_STABLE_UP View Gene Set 6.596e-11 144 1.813e-09 87 Genes up-regulated in genomically unstable Ewing's sarcoma tumors compared to the stable ones. www.broad.mit.e...
Broad PAL_PRMT5_TARGETS_UP View Gene Set 1.239e-10 178 3.367e-09 88 Genes up-regulated in NIH-3T3 cells (fibroblast) after knockdown of PRMT5 [Gene ID=10419] by RNAi. www.broad.mit.e...
Broad VANTVEER_BREAST_CANCER_METASTASIS_DN View Gene Set 3.131e-10 104 8.415e-09 89 Genes whose expression is significantly and negatively correlated with poor breast cancer clinical outcome (defined as developing distant metastases in less than 5 years). www.broad.mit.e...
Broad KIM_WT1_TARGETS_12HR_DN View Gene Set 3.725e-10 200 9.899e-09 90 Genes down-regulated in UB27 cells (osteosarcoma) at 12 hr after inducing the expression of a mutated form of WT1 [Gene ID=7490]. www.broad.mit.e...
Broad DANG_BOUND_BY_MYC View Gene Set 5.144e-10 1045 1.352e-08 91 Genes whose promoters are bound by MYC [Gene ID=4609] according to MYC Target Gene Database. www.broad.mit.e...
Broad HAHTOLA_MYCOSIS_FUNGOIDES_CD4_DN View Gene Set 1.454e-09 111 3.78e-08 92 Genes down-regulated in T helper cells (defines as CD4+) isolated from patients with mucosis fungoides compared to those from normal control donors. www.broad.mit.e...
Broad PYEON_CANCER_HEAD_AND_NECK_VS_CERVICAL_UP View Gene Set 1.483e-09 175 3.814e-08 93 Up-regulated genes in head and neck cancer compared to cervical carcinoma samples. www.broad.mit.e...
Broad GENTILE_RESPONSE_CLUSTER_D3 View Gene Set 1.566e-09 44 3.985e-08 94 Cluster d3: genes progressively down-regulated in WS1 cells (fibroblast) through 12 h irradiation with high dose UV-C. www.broad.mit.e...
Broad ODONNELL_TFRC_TARGETS_DN View Gene Set 1.9e-09 131 4.784e-08 95 Genes dpwn-regulated in P493-6 cells (B lymphocyte) upon knockdown of TFRC [Gene ID=7037] by RNAi. www.broad.mit.e...
Broad BLALOCK_ALZHEIMERS_DISEASE_DN View Gene Set 4.081e-09 1209 1.017e-07 96 Genes down-regulated in brain from patients with Alzheimer's disease. www.broad.mit.e...
Broad SENGUPTA_NASOPHARYNGEAL_CARCINOMA_WITH_LMP1_UP View Gene Set 4.284e-09 375 1.056e-07 97 Genes up-regulated in nasopharyngeal carcinoma (NPC) positive for LMP1 [Gene ID=9260] a latent gene of Epstein-Barr virus (EBV). www.broad.mit.e...
Broad MOREAUX_B_LYMPHOCYTE_MATURATION_BY_TACI_DN View Gene Set 6.853e-09 42 1.673e-07 98 Genes down-regulated in normal bone marrow plasma cells (BMPC) compared to polyclonal plasmablasts (PPC) that also distinguished multiple myeloma (MM) samples by expression of levels of TACI [Gene ID=23495]. www.broad.mit.e...
Broad CASORELLI_ACUTE_PROMYELOCYTIC_LEUKEMIA_DN View Gene Set 1.055e-08 639 2.55e-07 99 Genes down-regulated in APL (acute promyeolocytic leukemia) blasts expressing PML-RARA fusion [Gene ID=5371 5914] compared to normal promyeloblasts. www.broad.mit.e...
Broad FLECHNER_BIOPSY_KIDNEY_TRANSPLANT_OK_VS_DONOR_UP View Gene Set 1.196e-08 532 2.862e-07 100 Genes diffierentially expressed in kidney biopsies from patients with well functioning kidneys more than 1-year post transplant compared to the biopsies from normal living kidney donors. www.broad.mit.e...
Broad LEE_LIVER_CANCER_SURVIVAL_DN View Gene Set 1.343e-08 123 3.18e-07 101 Genes highly expressed in hepatocellular carcinoma with poor survival. www.broad.mit.e...
Broad BORCZUK_MALIGNANT_MESOTHELIOMA_UP View Gene Set 1.51e-08 290 3.541e-07 102 Genes up-regulated in biphasic (mixed) vs epithelial subtypes of malignant peritoneal mesothelioma. www.broad.mit.e...
Broad KANG_DOXORUBICIN_RESISTANCE_UP View Gene Set 1.752e-08 53 4.068e-07 103 Genes differentialy expressed in gastric cancer cell lines: doxorubicin [PubChem=31703] resistant vs sensitive. www.broad.mit.e...
Broad LEE_EARLY_T_LYMPHOCYTE_UP View Gene Set 1.776e-08 80 4.086e-07 104 Genes up-regulated at early stages of progenitor T lymphocyte maturation compared to the late stages. www.broad.mit.e...
Broad BENPORATH_NANOG_TARGETS View Gene Set 1.816e-08 946 4.136e-07 105 Set 'Nanog targets': genes upregulated and identified by ChIP on chip as Nanog [Gene ID=79923] transcription factor targets in human embryonic stem cells. www.broad.mit.e...
Broad CHEMNITZ_RESPONSE_TO_PROSTAGLANDIN_E2_UP View Gene Set 1.968e-08 135 4.441e-07 106 Genes up-regulated in CD4+ [Gene ID=920] T lymphocytes after stimulation with prostaglandin E2 [PubChem=5280360]. www.broad.mit.e...
Broad DACOSTA_UV_RESPONSE_VIA_ERCC3_TTD_DN View Gene Set 2.083e-08 76 4.657e-07 107 Genes exclusively down-regulated in fibroblasts expressing the TTD mutant form of ERCC3 [Gene ID=2071] after UVC irradiation. www.broad.mit.e...
Broad UDAYAKUMAR_MED1_TARGETS_UP View Gene Set 3.196e-08 129 7.079e-07 108 Genes up-regulated in HeLa cells after knockdown of MED1 [Gene ID=5469] by RNAi. www.broad.mit.e...
Broad VANHARANTA_UTERINE_FIBROID_WITH_7Q_DELETION_UP View Gene Set 3.312e-08 62 7.269e-07 109 Genes up-regulated in uterine fibroids with deletions in the 7q region vs those without the deletion. www.broad.mit.e...
Broad GARCIA_TARGETS_OF_FLI1_AND_DAX1_DN View Gene Set 3.79e-08 148 8.242e-07 110 Genes down-regulated in the A673 cells (Ewing sarcoma) after double knockdown of both FLI1 and DAX1 [Gene ID=2313 190] by RNAi. www.broad.mit.e...
Broad GAZDA_DIAMOND_BLACKFAN_ANEMIA_PROGENITOR_DN View Gene Set 3.899e-08 61 8.402e-07 111 Genes down-regulated in common hematopoietic progenitor cells isolated from bone marrow of patients with Diamond-Blackfan anemia (DBA) and mutated RPS19 [Gene ID=6223]. www.broad.mit.e...
Broad TOYOTA_TARGETS_OF_MIR34B_AND_MIR34C View Gene Set 3.952e-08 436 8.441e-07 112 Genes down-regulated in HCT116 cells (colon cancer) upon expression of MIR34B or MIR34C [Gene ID=407041 407042] microRNAs. www.broad.mit.e...
Broad FARMER_BREAST_CANCER_CLUSTER_2 View Gene Set 5.112e-08 33 1.082e-06 113 Cluster 2: selected proliferation and 8q amplicon genes clustered together across breast cancer samples. www.broad.mit.e...
Broad TOOKER_GEMCITABINE_RESISTANCE_DN View Gene Set 8.184e-08 122 1.702e-06 114 Down-regulated genes in Calu3 cells (non-small cell lung cancer NSCLC) resistant to gemcitabine [PubChem=3461] compared to the parental line sensitive to the drug. www.broad.mit.e...
Broad TOOKER_RESPONSE_TO_BEXAROTENE_UP View Gene Set 8.184e-08 122 1.702e-06 114 Up-regulated genes in Calu3 cells (non-small lung cancer cells NSCLC) resitant to gemcitabine [PubChem=3461] in response to bexarotene [PubChem=82146]. www.broad.mit.e...
Broad KAUFFMANN_MELANOMA_RELAPSE_UP View Gene Set 8.49e-08 57 1.751e-06 116 DNA repair and replication genes up-regulated in melanoma patients who will relapse vs patients who will not. www.broad.mit.e...
Broad GARGALOVIC_RESPONSE_TO_OXIDIZED_PHOSPHOLIPIDS_BLUE_UP View Gene Set 9.787e-08 118 2.001e-06 117 Genes from the blue module which are up-regulated in HAEC cells (primary aortic endothelium) after exposure to the oxidized 1-palmitoyl-2-arachidonyl-sn-3-glycerophosphorylcholine (oxPAPC). www.broad.mit.e...
Broad SMITH_TERT_TARGETS_UP View Gene Set 1.17e-07 128 2.368e-06 118 Genes consistently up-regulated in HMEC cells (primary mammary epithelium) upon expression of TERT [Gene ID=7015] off a retroviral vector. www.broad.mit.e...
Broad GRADE_COLON_AND_RECTAL_CANCER_UP View Gene Set 1.178e-07 213 2.368e-06 118 Up-regulated genes in both rectal and colon carcinoma compared to normal mucosa samples. www.broad.mit.e...
Broad STARK_PREFRONTAL_CORTEX_22Q11_DELETION_DN View Gene Set 1.277e-07 437 2.545e-06 120 Genes down-regulated in prefrontal cortex (PFC) of mice carrying a hemizygotic microdeletion in the 22q11.2 region. www.broad.mit.e...
Broad REN_BOUND_BY_E2F View Gene Set 1.478e-07 47 2.921e-06 121 Genes whose promoters were bound by E2F1 [Gene ID=1869] and E2F4 [Gene ID=1874] in the primary fibroblasts WI-38 by ChIP on chip assay. www.broad.mit.e...
Broad WANG_LMO4_TARGETS_DN View Gene Set 1.534e-07 327 3.008e-06 122 Genes down-regulated in MCF7 cells (breast cancer) engineered to conditionally express LMO4 [Gene ID=8543] by a Tet Off system. www.broad.mit.e...
Broad RICKMAN_METASTASIS_UP View Gene Set 1.815e-07 316 3.53e-06 123 Genes up-regulated in metastatic vs non-metastatic HNSCC (head and neck squamous cell carcinoma) samples. www.broad.mit.e...
Broad VERNELL_RETINOBLASTOMA_PATHWAY_UP View Gene Set 1.88e-07 39 3.626e-06 124 Cluster 1: genes up-regulated by RB1 [Gene ID=5925] CDNK2A [Gene ID=1029] and one of the E2Fs (E2F1 E2F2 or E2F3 [Gene ID=1869 1870 1871]). www.broad.mit.e...
Broad SCHUHMACHER_MYC_TARGETS_UP View Gene Set 2.022e-07 68 3.87e-06 125 Genes up-regulated in P493-6 cells (Burkitt's lymphoma) induced to express MYC [Gene ID=4609]. www.broad.mit.e...
Broad STEIN_ESRRA_TARGETS View Gene Set 3.83e-07 508 7.272e-06 126 Genes regulated by ESRRA [Gene ID=2101] in MCF-7 cells (breast cancer). www.broad.mit.e...
Broad MOOTHA_HUMAN_MITODB_6_2002 View Gene Set 4.507e-07 420 8.488e-06 127 Mitochondrial genes; based on literature and sequence annotation resources and converted to Affymetrix HG-U133A probe sets. www.broad.mit.e...
Broad LASTOWSKA_NEUROBLASTOMA_COPY_NUMBER_DN View Gene Set 5.188e-07 742 9.695e-06 128 Genes with copy number losses in primary neuroblastoma tumors. www.broad.mit.e...
Broad DING_LUNG_CANCER_EXPRESSION_BY_COPY_NUMBER View Gene Set 5.295e-07 91 9.818e-06 129 The lung adenocarcinoma TSP (tumor sequencing project) genes showing strong correlation between DNA copy number variation and gene expression. www.broad.mit.e...
Broad NOUZOVA_TRETINOIN_AND_H4_ACETYLATION View Gene Set 7.355e-07 124 1.353e-05 130 Genes whose CpG islands showed greatly increased histone H4 acetylation in NB4 cells (acute promyelocytic leukemia APL) upon treatment with tretinoin [PubChem=5538]. www.broad.mit.e...
Broad RIZ_ERYTHROID_DIFFERENTIATION View Gene Set 8.606e-07 71 1.559e-05 131 Selected gradually up-regulated genes in the TLX1 [Gene ID=3195] Tet On iEBHX15-4 cells (pro-erythroblasts). www.broad.mit.e...
Broad BLUM_RESPONSE_TO_SALIRASIB_UP View Gene Set 8.595e-07 240 1.559e-05 131 Selected genes up-regulated in response to the Ras inhibitor salirasib [PubChem=5469318] in a panel of cancer cell lines with constantly active HRAS [Gene ID=3265]. www.broad.mit.e...
Broad SEIDEN_ONCOGENESIS_BY_MET View Gene Set 9.395e-07 83 1.69e-05 133 Genes changed in xenograft tumors formed by DLD-1 or DKO-4 cells (colon cancer) overexpressing MET [Gene ID=4233]. www.broad.mit.e...
Broad SCHLOSSER_MYC_TARGETS_AND_SERUM_RESPONSE_DN View Gene Set 9.48e-07 46 1.692e-05 134 Cluster 6: genes down-regulated in B493-6 cells (B lymphocytes) by MYC [Gene ID=4609] in combination with serum but not affected by serum alone; they are also up-regulated by MYC alone. www.broad.mit.e...
Broad MOOTHA_MITOCHONDRIA View Gene Set 1.082e-06 433 1.918e-05 135 Mitochondrial genes www.broad.mit.e...
Broad FUJII_YBX1_TARGETS_DN View Gene Set 1.376e-06 139 2.421e-05 136 Genes down-regulated in MCF-7 cells (breast cancer) after knockdown of YBX1 [Gene ID=4904] by RNAi. www.broad.mit.e...
Broad ZHAN_MULTIPLE_MYELOMA_PR_UP View Gene Set 1.53e-06 43 2.671e-05 137 Top 50 up-regulated genes in cluster PR of multiple myeloma samples characterized by increased expression of proliferation and cell cycle genes. www.broad.mit.e...
Broad WANG_CLIM2_TARGETS_DN View Gene Set 1.584e-06 166 2.746e-05 138 Genes down-regulated in MCF7 cells (breast cancer) engineered to conditionally express a dominant negative form of CLIM2 [Gene ID=8861] by a Tet Off system. www.broad.mit.e...
Broad KAUFFMANN_DNA_REPLICATION_GENES View Gene Set 1.636e-06 128 2.816e-05 139 Genes involved in DNA replication compiled manually by the authors. www.broad.mit.e...
Broad SPIELMAN_LYMPHOBLAST_EUROPEAN_VS_ASIAN_DN View Gene Set 2.118e-06 571 3.594e-05 140 Genes down-regulated in lymphoblastoid cells from the European population compared to those from the Asian population. www.broad.mit.e...
Broad SESTO_RESPONSE_TO_UV_C5 View Gene Set 2.105e-06 46 3.594e-05 140 Cluster 5: genes changed in primary keratinocytes by UVB irradiation. www.broad.mit.e...
Broad TANG_SENESCENCE_TP53_TARGETS_DN View Gene Set 2.61e-06 40 4.397e-05 142 Genes down-regulated in WI-38 cells (senescent primary fibroblasts) after inactivation of TP53 [Gene ID=7157] by GSE56 polypeptide. www.broad.mit.e...
Broad AMUNDSON_RESPONSE_TO_ARSENITE View Gene Set 2.79e-06 180 4.667e-05 143 Genes discriminating responses to sodium arsenite [PubChem ID=26435] from other stresses. www.broad.mit.e...
Broad WHITEFORD_PEDIATRIC_CANCER_MARKERS View Gene Set 2.851e-06 92 4.736e-05 144 Differentially expressed genes in a panel of xenografts representing 8 common pediatric tumors compared to the normal tissues. www.broad.mit.e...
Broad NAKAMURA_CANCER_MICROENVIRONMENT_DN View Gene Set 2.997e-06 45 4.945e-05 145 Genes down-regulated in pancreatic cancer cells grown in orthotopic xenograft tumors compared to those grown in vitro. www.broad.mit.e...
Broad PUJANA_BREAST_CANCER_LIT_INT_NETWORK View Gene Set 3.53e-06 100 5.783e-05 146 Genes constituting the LIT-Int network of proteins interacting with breast cancer reference proteins BRCA1 BRCA2 ATM and CHEK2 [Gene ID=672 675 472 11200]; the interactions were manually curated from the literature. www.broad.mit.e...
Broad DE_YY1_TARGETS_DN View Gene Set 4.64e-06 90 7.55e-05 147 Genes down-regulated in SaOS-2 cells (osteosarcoma) upon knockdown of YY1 [Gene ID=7528] by RNAi. www.broad.mit.e...
Broad MILI_PSEUDOPODIA_CHEMOTAXIS_UP View Gene Set 4.926e-06 65 7.962e-05 148 Transcripts enriched in pseudopodia of NIH/3T3 cells (fibroblast) in response to the chemotactic migration stimulus by lysophosphatidic acid (LPA) [PubChem=3988]. www.broad.mit.e...
Broad ZHAN_VARIABLE_EARLY_DIFFERENTIATION_GENES_DN View Gene Set 5.658e-06 26 9.083e-05 149 The vEDG set: most variable early differentiation genes (EDG) with similar expression patterns in tonsil B lymphocytes (TBC) and multiple myeloma (MM) cells compared to the plasma cells from tonsil (TPC) and bone marrow (BPC). www.broad.mit.e...
Broad ODONNELL_TARGETS_OF_MYC_AND_TFRC_DN View Gene Set 6.598e-06 42 0.0001052 150 Genes down-regulated in P493-6 cells (B lymphocyte) by MYC [Gene ID=4609] and up-regulated by RNAi knockdown of TFRC [Gene ID=7037]. www.broad.mit.e...
Broad MISSIAGLIA_REGULATED_BY_METHYLATION_DN View Gene Set 6.87e-06 96 0.0001081 151 Genes down-regulated in PaCa44 and CFPAC1 cells (pancreatic cancer) after treatment with decitabine [PubChem=451668] a DNA hypomethylating agent similar to azacitidine [PubChem=9444]. www.broad.mit.e...
Broad WONG_MITOCHONDRIA_GENE_MODULE View Gene Set 6.868e-06 208 0.0001081 151 Genes that comprise the mitochondria gene module www.broad.mit.e...
Broad BHATI_G2M_ARREST_BY_2METHOXYESTRADIOL_UP View Gene Set 7.26e-06 116 0.0001135 153 Up-regulated genes in MDA-MB-435 cells (breast cancer) undergoing G2/M arrest after treatment with 2-methoxyestradiol (2ME2)[PubChem=1573]. www.broad.mit.e...
Broad LY_AGING_OLD_DN View Gene Set 8.674e-06 47 0.0001347 154 Genes up-regulated in fibroblasts from old individuals compared to those from young donors. www.broad.mit.e...
Broad FURUKAWA_DUSP6_TARGETS_PCI35_DN View Gene Set 8.968e-06 66 0.0001384 155 Genes down-regulated in PCI-35 cells (pancreatic cancer lack endogenous DUSP6 [Gene ID=1848]) upon expression of DUSP6 off an adenoviral vector. www.broad.mit.e...
Broad CHOI_ATL_STAGE_PREDICTOR View Gene Set 9.288e-06 33 0.0001424 156 Genes used to predict the clinical stages of acute T-cell leukemia (ATL): chronic vs acute. www.broad.mit.e...
Broad GENTILE_UV_RESPONSE_CLUSTER_D4 View Gene Set 9.625e-06 49 0.0001466 157 Cluster d4: genes progressively down-regulated in WS1 cells (fibroblast) through 12 h after irradiation with high dose UV-C. www.broad.mit.e...
Broad SPIELMAN_LYMPHOBLAST_EUROPEAN_VS_ASIAN_UP View Gene Set 9.929e-06 469 0.0001503 158 Genes up-regulated in lymphoblastoid cells from the European population compared to those from the Asian population. www.broad.mit.e...
Broad GOLDRATH_HOMEOSTATIC_PROLIFERATION View Gene Set 1.013e-05 154 0.0001524 159 Up-regulated in CD8+ [Gene ID=925] T lymphocytes undergoing homeostatic proliferation (HP) versus the naive cells; these genes are not up-regulated versus effector or memory cell population. www.broad.mit.e...
Broad BENPORATH_SOX2_TARGETS View Gene Set 1.098e-05 704 0.0001642 160 Set 'Sox2 targets': genes upregulated and identified by ChIP on chip as SOX2 [Gene ID=6657] transcription factor targets in human embryonic stem cells. www.broad.mit.e...
Broad FINETTI_BREAST_CANCER_KINOME_RED View Gene Set 1.156e-05 15 0.0001707 161 Genes in the red cluster of protein kinases distinguishing between luminal A and basal breast cancer subtypes. www.broad.mit.e...
Broad FINETTI_BREAST_CANCER_BASAL_VS_LUMINAL View Gene Set 1.156e-05 15 0.0001707 161 Protein kinases distinguishing between basal and luminal A subtypes of breast cancer. www.broad.mit.e...
Broad RHODES_UNDIFFERENTIATED_CANCER View Gene Set 1.208e-05 60 0.0001772 163 Genes commonly up-regulated in undifferentiated cancer relative to well-differentiated cancer based on the meta-analysis of the OncoMine gene expression database. www.broad.mit.e...
Broad SLEBOS_HEAD_AND_NECK_CANCER_WITH_HPV_UP View Gene Set 1.271e-05 72 0.0001854 164 Genes up-regulated in head and neck squamous cell carcinoma (HNSCC) samples positive for HPV compared to the HPV-negative tumors. www.broad.mit.e...
Broad LE_EGR2_TARGETS_UP View Gene Set 1.28e-05 100 0.0001856 165 Genes up-regulated in P14 nerves of transgenic mice having hypomorhic (reduced function) allele of EGR2 [Gene ID=1959]. www.broad.mit.e...
Broad SONG_TARGETS_OF_IE86_CMV_PROTEIN View Gene Set 1.322e-05 49 0.0001905 166 Cellular genes up-regulated in forskin fibroblasts by expression of CMV EI86 protein off an adenovirus vector. www.broad.mit.e...
Broad OKUMURA_INFLAMMATORY_RESPONSE_LPS View Gene Set 1.449e-05 179 0.0002075 167 Genes up-regulated in mast cells (MC) after stimulation with a bacterial lipopolysaccharide (LPS). www.broad.mit.e...
Broad BILD_CTNNB1_ONCOGENIC_SIGNATURE View Gene Set 1.502e-05 72 0.0002138 168 Genes selected in supervised analyses to discriminate cells expressing activated beta-catenin (CTNNB1) [Gene ID=1499] oncogene from control cells expressing GFP. www.broad.mit.e...
Broad CAIRO_HEPATOBLASTOMA_UP View Gene Set 1.567e-05 200 0.0002218 169 Genes up-regulated in hepatoblastoma samples compared to normal liver tissue. www.broad.mit.e...
Broad STEIN_ESRRA_TARGETS_DN View Gene Set 1.633e-05 100 0.0002297 170 Genes down-regulated by ESRRA [Gene ID=2101] only. www.broad.mit.e...
Broad RUTELLA_RESPONSE_TO_HGF_VS_CSF2RB_AND_IL4_DN View Gene Set 2.061e-05 238 0.0002882 171 Genes down-regulated in peripheral blood mononucleocytes by HGF [Gene ID=3082] compared to those regulated by CSF2RB (GM-CSF) [Gene ID=1437] and IL4 [Gene ID=3565]. www.broad.mit.e...
Broad WONG_PROTEASOME_GENE_MODULE View Gene Set 2.078e-05 46 0.000289 172 Genes that comprise the proteasome gene module www.broad.mit.e...
Broad CHIANG_LIVER_CANCER_SUBCLASS_PROLIFERATION_UP View Gene Set 2.144e-05 135 0.0002964 173 Top 200 marker genes up-regulated in the 'proliferation' subclass of hepatocellular carcinoma (HCC); characterized by increased proliferation high levels of serum AFP [Gene ID=174] and chromosomal instability. www.broad.mit.e...
Broad DACOSTA_UV_RESPONSE_VIA_ERCC3_XPCS_DN View Gene Set 2.229e-05 75 0.0003047 174 Genes exclusively down-regulated in fibroblasts expressing the XP/CS mutant form of ERCC3 [Gene ID=2071] after high dose UVC irradiation. www.broad.mit.e...
Broad CAFFAREL_RESPONSE_TO_THC_UP View Gene Set 2.219e-05 25 0.0003047 174 Genes up-regulated in EVSA-T cells (breast cancer) treated THC (delta-9-tetrahydrocannabinol) [PubChem=6610319]. www.broad.mit.e...
Broad MITSIADES_RESPONSE_TO_APLIDIN_UP View Gene Set 2.41e-05 413 0.0003275 176 Genes up-regulated in the MM1S cells (multiple myeloma) after treatment with aplidin [PubChem=44152164] a marine-derived compound with potential anti-cancer properties. www.broad.mit.e...
Broad YAO_TEMPORAL_RESPONSE_TO_PROGESTERONE_CLUSTER_13 View Gene Set 2.524e-05 158 0.000341 177 Genes co-regulated in uterus during a time course response to progesterone [PubChem=5994]: SOM cluster 13. www.broad.mit.e...
Broad WU_APOPTOSIS_BY_CDKN1A_VIA_TP53 View Gene Set 3.04e-05 36 0.0004086 178 Genes downstream of both CDKN1A and TP53 [Gene ID=1026 7157] in 2774qw1 cells (ovarian cancer). www.broad.mit.e...
Broad NUYTTEN_NIPP1_TARGETS_DN View Gene Set 5.028e-05 758 0.000672 179 Genes down-regulated in PC3 cells (prostate cancer) after knockdown of NIPP1 [Gene ID=5511] by RNAi. www.broad.mit.e...
Broad GENTILE_UV_RESPONSE_CLUSTER_D2 View Gene Set 5.628e-05 33 0.000748 180 Cluster d2: genes down-regulated consistently in WS1 cells (fibroblast) between 6 h and 24 h after irradiation with high dose UV-C. www.broad.mit.e...
Broad CHANG_CORE_SERUM_RESPONSE_UP View Gene Set 6.916e-05 66 0.000914 181 Up-regulated genes in the canonical gene expression signature of the fibroblast core serum response (CSR) defined by the Stanford group. www.broad.mit.e...
Broad FAELT_B_CLL_WITH_VH_REARRANGEMENTS_DN View Gene Set 7.656e-05 46 0.001006 182 Genes down-regulated in B-CLL (B-cell chronic lymphocytic leukemia) patients with mutated immunoglobulin variable heavy chain (VH) genes. www.broad.mit.e...
Broad SU_TESTIS View Gene Set 8.192e-05 75 0.001071 183 Genes up-regulated specifically in human testis tissue. www.broad.mit.e...
Broad DANG_MYC_TARGETS_UP View Gene Set 9.229e-05 127 0.0012 184 Genes up-regulated by MYC [Gene ID=4609] and whose promoters are bound by MYC according to MYC Target Gene Database. www.broad.mit.e...
Broad SAKAI_CHRONIC_HEPATITIS_VS_LIVER_CANCER_UP View Gene Set 0.0001156 82 0.001494 185 Selected genes up-regulated in peripheral blood monocytes (PBMC) of patients with hepatocellular carcinoma (HCC) compared to those with chronic hepatitis. www.broad.mit.e...
Broad LINDGREN_BLADDER_CANCER_WITH_LOH_IN_CHR9Q View Gene Set 0.0001218 106 0.001567 186 Genes down-regulated in urothelial cell carcinoma (UCC) tumors with LOH on 9q as compared to the tumors showing retention. www.broad.mit.e...
Broad YU_MYC_TARGETS_UP View Gene Set 0.000132 37 0.001688 187 Genes up-regulated in B cell lymphoma tumors expressing an activated form of MYC [Gene ID=4609]. www.broad.mit.e...
Broad BROWNE_HCMV_INFECTION_14HR_DN View Gene Set 0.0001332 289 0.001695 188 Genes down-regulated in primary fibroblast cell culture after infection with HCMV (AD169 strain) at 14 h time point that were not down-regulated at the previous time point 12 h. www.broad.mit.e...
Broad GARGALOVIC_RESPONSE_TO_OXIDIZED_PHOSPHOLIPIDS_RED_UP View Gene Set 0.0001385 17 0.001753 189 Genes from the red module which are up-regulated in HAEC cells (primary aortic endothelium) after exposure to the oxidized 1-palmitoyl-2-arachidonyl-sn-3-glycerophosphorylcholine (oxPAPC). www.broad.mit.e...
Broad ONDER_CDH1_TARGETS_1_DN View Gene Set 0.0001451 161 0.001827 190 Genes down-regulated in HMLE cells (mmortalized nontransformed mammary epithelial) by expression of a dominant-negative form of E-cadhedrin (CDH1) [Gene ID=999]. www.broad.mit.e...
Broad PYEON_HPV_POSITIVE_TUMORS_UP View Gene Set 0.000148 86 0.001844 191 Up-regulated genes in cervical carcinoma and head and neck tumors positive for human papilloma virus (HPV) compared to those negative for HPV. www.broad.mit.e...
Broad AMUNDSON_GAMMA_RADIATION_RESPONSE View Gene Set 0.0001476 36 0.001844 191 Genes down-regulated across the entire panel of NCI-60 cell lines in response to gamma radiation. www.broad.mit.e...
Broad CHANG_CYCLING_GENES View Gene Set 0.0001503 49 0.001863 193 Fibroblast serum response genes showing periodic expression during the cell cycle; excluded from the core serum response signature. www.broad.mit.e...
Broad GENTILE_UV_RESPONSE_CLUSTER_D6 View Gene Set 0.0001518 29 0.001871 194 Cluster d6: genes progressively down-regulated in WS1 cells (fibroblast) through 18 h after irradiation with high dose UV-C. www.broad.mit.e...
Broad ELVIDGE_HIF1A_TARGETS_UP View Gene Set 0.0001599 64 0.001962 195 Genes up-regulated in MCF7 cells (breast cancer) after knockdown of HIF1A [Gene ID=3091] by RNAi. www.broad.mit.e...
Broad CAFFAREL_RESPONSE_TO_THC_8HR_5_DN View Gene Set 0.0001751 9 0.002137 196 Genes down-regulated in EVSA-T cells (breast cancer) treated with 5 micromolar THC (delta-9-tetrahydrocannabinol) [PubChem=6610319] for 8 h. www.broad.mit.e...
Broad TAKAO_RESPONSE_TO_UVB_RADIATION_DN View Gene Set 0.0002 89 0.002428 197 Genes down-regulated in primary tissue culture of epidermal kerationcytes after UVB irradiation. www.broad.mit.e...
Broad SHEPARD_CRUSH_AND_BURN_MUTANT_UP View Gene Set 0.0002032 135 0.002455 198 Human orthologs of genes up-regulated in the crb ('crash and burn') zebrafish mutant that represents a loss-of-function mutation in BMYB [Gene ID=4605]. www.broad.mit.e...
Broad YAO_TEMPORAL_RESPONSE_TO_PROGESTERONE_CLUSTER_17 View Gene Set 0.0002118 165 0.002546 199 Genes co-regulated in uterus during a time course response to progesterone [PubChem=5994]: SOM cluster 17. www.broad.mit.e...
Broad KRIGE_RESPONSE_TO_TOSEDOSTAT_6HR_UP View Gene Set 0.0002213 869 0.002647 200 Genes up-regulated in HL-60 cells (acute promyelocytic leukemia APL) after treatment with the aminopeptidase inhibitor tosedostat (CHR-2797) [PubChem=15547703] for 6 h. www.broad.mit.e...

Gene Set Collection: Broad.c2.CP.KEGG

Arguments: refPop=all, featureType=featureNames, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad KEGG_SPLICEOSOME View Gene Set 3.097e-16 118 5.76e-14 1 Spliceosome www.broad.mit.e...
Broad KEGG_CELL_CYCLE View Gene Set 4.576e-07 128 4.256e-05 2 Cell cycle www.broad.mit.e...
Broad KEGG_RNA_DEGRADATION View Gene Set 5.828e-06 59 0.0003613 3 RNA degradation www.broad.mit.e...
Broad KEGG_PYRIMIDINE_METABOLISM View Gene Set 9.221e-06 98 0.0004288 4 Pyrimidine metabolism www.broad.mit.e...
Broad KEGG_DNA_REPLICATION View Gene Set 0.000231 36 0.005747 5 DNA replication www.broad.mit.e...
Broad KEGG_PROTEASOME View Gene Set 0.0001767 48 0.005747 5 Proteasome www.broad.mit.e...
Broad KEGG_MISMATCH_REPAIR View Gene Set 0.0002472 23 0.005747 5 Mismatch repair www.broad.mit.e...
Broad KEGG_UBIQUITIN_MEDIATED_PROTEOLYSIS View Gene Set 0.0002289 138 0.005747 5 Ubiquitin mediated proteolysis www.broad.mit.e...
Broad KEGG_NUCLEOTIDE_EXCISION_REPAIR View Gene Set 0.001427 44 0.0295 9 Nucleotide excision repair www.broad.mit.e...

Gene Set Collection: Broad.c2.CP.REACTOME

Arguments: refPop=all, featureType=featureNames, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad REACTOME_CELL_CYCLE_MITOTIC View Gene Set 1.77e-16 306 7.612e-14 1 Genes involved in Cell Cycle Mitotic www.broad.mit.e...
Broad REACTOME_MITOTIC_M_M_G1_PHASES View Gene Set 8.028e-15 157 1.726e-12 2 Genes involved in Mitotic M-M/G1 phases www.broad.mit.e...
Broad REACTOME_CELL_CYCLE_CHECKPOINTS View Gene Set 1.974e-12 110 2.83e-10 3 Genes involved in Cell Cycle Checkpoints www.broad.mit.e...
Broad REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA View Gene Set 2.797e-11 128 3.007e-09 4 Genes involved in Processing of Capped Intron-Containing Pre-mRNA www.broad.mit.e...
Broad REACTOME_METABOLISM_OF_RNA View Gene Set 7.415e-11 95 6.377e-09 5 Genes involved in Metabolism of RNA www.broad.mit.e...
Broad REACTOME_GENE_EXPRESSION View Gene Set 2.617e-09 415 1.876e-07 6 Genes involved in Gene Expression www.broad.mit.e...
Broad REACTOME_MITOTIC_PROMETAPHASE View Gene Set 3.805e-09 92 2.045e-07 7 Genes involved in Mitotic Prometaphase www.broad.mit.e...
Broad REACTOME_SYNTHESIS_OF_DNA View Gene Set 3.511e-09 89 2.045e-07 7 Genes involved in Synthesis of DNA www.broad.mit.e...
Broad REACTOME_G2_M_CHECKPOINTS View Gene Set 6.712e-09 43 3.207e-07 9 Genes involved in G2/M Checkpoints www.broad.mit.e...
Broad REACTOME_G1_S_TRANSITION View Gene Set 2.739e-08 102 1.178e-06 10 Genes involved in G1/S Transition www.broad.mit.e...
Broad REACTOME_S_PHASE View Gene Set 3.177e-08 103 1.242e-06 11 Genes involved in S Phase www.broad.mit.e...
Broad REACTOME_FORMATION_AND_MATURATION_OF_MRNA_TRANSCRIPT View Gene Set 4.874e-08 142 1.697e-06 12 Genes involved in Formation and Maturation of mRNA Transcript www.broad.mit.e...
Broad REACTOME_SNRNP_ASSEMBLY View Gene Set 5.129e-08 50 1.697e-06 12 Genes involved in snRNP Assembly www.broad.mit.e...
Broad REACTOME_DNA_REPLICATION_PRE_INITIATION View Gene Set 6.731e-08 76 2.067e-06 14 Genes involved in DNA Replication Pre-Initiation www.broad.mit.e...
Broad REACTOME_TRANSCRIPTION View Gene Set 1.059e-07 188 3.037e-06 15 Genes involved in Transcription www.broad.mit.e...
Broad REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS View Gene Set 1.318e-07 37 3.541e-06 16 Genes involved in Activation of ATR in response to replication stress www.broad.mit.e...
Broad REACTOME_MRNA_SPLICING View Gene Set 3.593e-07 97 9.087e-06 17 Genes involved in mRNA Splicing www.broad.mit.e...
Broad REACTOME_CDC20_PHOSPHO_APC_MEDIATED_DEGRADATION_OF_CYCLIN_A View Gene Set 7.13e-07 63 1.703e-05 18 Genes involved in Cdc20:Phospho-APC/C mediated degradation of Cyclin A www.broad.mit.e...
Broad REACTOME_ELONGATION_AND_PROCESSING_OF_CAPPED_TRANSCRIPTS View Gene Set 8.077e-07 124 1.828e-05 19 Genes involved in Elongation and Processing of Capped Transcripts www.broad.mit.e...
Broad REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRON_CONTAINING_TRANSCRIPT View Gene Set 1.115e-06 42 2.397e-05 20 Genes involved in Transport of Mature mRNA derived from an Intron-Containing Transcript www.broad.mit.e...
Broad REACTOME_M_G1_TRANSITION View Gene Set 1.215e-06 61 2.489e-05 21 Genes involved in M/G1 Transition www.broad.mit.e...
Broad REACTOME_REGULATION_OF_APC_ACTIVATORS_BETWEEN_G1_S_AND_EARLY_ANAPHASE View Gene Set 1.857e-06 71 3.629e-05 22 Genes involved in Regulation of APC/C activators between G1/S and early anaphase www.broad.mit.e...
Broad REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS View Gene Set 2.028e-06 29 3.791e-05 23 Genes involved in Transport of Ribonucleoproteins into the Host Nucleus www.broad.mit.e...
Broad REACTOME_TRANSPORT_OF_THE_SLBP_INDEPENDENT_MATURE_MRNA View Gene Set 2.176e-06 32 3.898e-05 24 Genes involved in Transport of the SLBP independent Mature mRNA www.broad.mit.e...
Broad REACTOME_ORC1_REMOVAL_FROM_CHROMATIN View Gene Set 3.626e-06 63 6.237e-05 25 Genes involved in Orc1 removal from chromatin www.broad.mit.e...
Broad REACTOME_DNA_REPAIR View Gene Set 4.341e-06 102 7.179e-05 26 Genes involved in DNA Repair www.broad.mit.e...
Broad REACTOME_NUCLEAR_IMPORT_OF_REV_PROTEIN View Gene Set 5.593e-06 30 8.908e-05 27 Genes involved in Nuclear import of Rev protein www.broad.mit.e...
Broad REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX View Gene Set 6.091e-06 52 9.354e-05 28 Genes involved in CDT1 association with the CDC6:ORC:origin complex www.broad.mit.e...
Broad REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE View Gene Set 7.219e-06 90 0.000107 29 Genes involved in Late Phase of HIV Life Cycle www.broad.mit.e...
Broad REACTOME_ACTIVATION_OF_THE_PRE_REPLICATIVE_COMPLEX View Gene Set 1.085e-05 30 0.000154 30 Genes involved in Activation of the pre-replicative complex www.broad.mit.e...
Broad REACTOME_DNA_STRAND_ELONGATION View Gene Set 1.11e-05 31 0.000154 30 Genes involved in DNA strand elongation www.broad.mit.e...
Broad REACTOME_RNA_POLYMERASE_I_III_AND_MITOCHONDRIAL_TRANSCRIPTION View Gene Set 1.215e-05 120 0.0001633 32 Genes involved in RNA Polymerase I RNA Polymerase III and Mitochondrial Transcription www.broad.mit.e...
Broad REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC View Gene Set 1.331e-05 57 0.0001735 33 Genes involved in Autodegradation of Cdh1 by Cdh1:APC/C www.broad.mit.e...
Broad REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY View Gene Set 1.811e-05 29 0.000229 34 Genes involved in NEP/NS2 Interacts with the Cellular Export Machinery www.broad.mit.e...
Broad REACTOME_VPR_MEDIATED_NUCLEAR_IMPORT_OF_PICS View Gene Set 1.874e-05 31 0.0002302 35 Genes involved in Vpr-mediated nuclear import of PICs www.broad.mit.e...
Broad REACTOME_INACTIVATION_OF_APC_VIA_DIRECT_INHIBITION_OF_THE_APCOMPLEX View Gene Set 5.775e-05 18 0.0006898 36 Genes involved in Inactivation of APC/C via direct inhibition of the APC/C complex www.broad.mit.e...
Broad REACTOME_PHOSPHORYLATION_OF_THE_APC View Gene Set 7.836e-05 17 0.0009107 37 Genes involved in Phosphorylation of the APC/C www.broad.mit.e...
Broad REACTOME_E2F_ENABLED_INHIBITION_OF_PRE_REPLICATION_COMPLEX_FORMATION View Gene Set 8.095e-05 10 0.000916 38 Genes involved in E2F-enabled inhibition of pre-replication complex formation www.broad.mit.e...
Broad REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION View Gene Set 9.001e-05 33 0.0009925 39 Genes involved in E2F mediated regulation of DNA replication www.broad.mit.e...
Broad REACTOME_HIV_LIFE_CYCLE View Gene Set 9.591e-05 103 0.001031 40 Genes involved in HIV Life Cycle www.broad.mit.e...
Broad REACTOME_REGULATION_OF_GLUCOKINASE_BY_GLUCOKINASE_REGULATORY_PROTEIN View Gene Set 0.0001096 29 0.001149 41 Genes involved in Regulation of Glucokinase by Glucokinase Regulatory Protein www.broad.mit.e...
Broad REACTOME_REV_MEDIATED_NUCLEAR_EXPORT_OF_HIV1_RNA View Gene Set 0.0001137 31 0.001164 42 Genes involved in Rev-mediated nuclear export of HIV-1 RNA www.broad.mit.e...
Broad REACTOME_METABOLISM_OF_MRNA View Gene Set 0.0001255 45 0.001255 43 Genes involved in Metabolism of mRNA www.broad.mit.e...
Broad REACTOME_PYRIMIDINE_METABOLISM View Gene Set 0.0001384 22 0.001352 44 Genes involved in Pyrimidine metabolism www.broad.mit.e...
Broad REACTOME_HIV_INFECTION View Gene Set 0.0001467 183 0.001402 45 Genes involved in HIV Infection www.broad.mit.e...
Broad REACTOME_TELOMERE_MAINTENANCE View Gene Set 0.0001756 77 0.001642 46 Genes involved in Telomere Maintenance www.broad.mit.e...
Broad REACTOME_P53_INDEPENDENT_DNA_DAMAGE_RESPONSE View Gene Set 0.000347 43 0.003108 47 Genes involved in p53-Independent DNA Damage Response www.broad.mit.e...
Broad REACTOME_RNA_POLYMERASE_II_TRANSCRIPTION View Gene Set 0.0003404 83 0.003108 47 Genes involved in RNA Polymerase II Transcription www.broad.mit.e...
Broad REACTOME_APCDC20_MEDIATED_DEGRADATION_OF_CYCLIN_B View Gene Set 0.000455 18 0.003993 49 Genes involved in APC/C:Cdc20 mediated degradation of Cyclin B www.broad.mit.e...
Broad REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE View Gene Set 0.0004667 47 0.004013 50 Genes involved in Regulation of ornithine decarboxylase (ODC) www.broad.mit.e...
Broad REACTOME_GLUCOSE_TRANSPORT View Gene Set 0.0005972 38 0.005035 51 Genes involved in Glucose transport www.broad.mit.e...
Broad REACTOME_EXTENSION_OF_TELOMERES View Gene Set 0.0006336 28 0.00524 52 Genes involved in Extension of Telomeres www.broad.mit.e...
Broad REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G View Gene Set 0.0006624 47 0.005374 53 Genes involved in Vif-mediated degradation of APOBEC3G www.broad.mit.e...
Broad REACTOME_ASSOCIATION_OF_TRIC_CCT_WITH_TARGET_PROTEINS_DURING_BIOSYNTHESIS View Gene Set 0.0008171 29 0.006506 54 Genes involved in Association of TriC/CCT with target proteins during biosynthesis www.broad.mit.e...
Broad REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1 View Gene Set 0.0008482 48 0.006631 55 Genes involved in SCF-beta-TrCP mediated degradation of Emi1 www.broad.mit.e...
Broad REACTOME_UNWINDING_OF_DNA View Gene Set 0.0009543 11 0.007328 56 Genes involved in Unwinding of DNA www.broad.mit.e...
Broad REACTOME_MRNA_DECAY_BY_5_TO_3_EXORIBONUCLEASE View Gene Set 0.001065 13 0.008031 57 Genes involved in mRNA Decay by 5' to 3' Exoribonuclease www.broad.mit.e...
Broad REACTOME_RNA_POLYMERASE_I_PROMOTER_CLEARANCE View Gene Set 0.0012 82 0.008897 58 Genes involved in RNA PolymerasePromoter Clearance www.broad.mit.e...
Broad REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_ View Gene Set 0.001352 58 0.009644 59 Genes involved in Cyclin E associated events during G1/S transition www.broad.mit.e...
Broad REACTOME_LAGGING_STRAND_SYNTHESIS View Gene Set 0.001364 20 0.009644 59 Genes involved in Lagging Strand Synthesis www.broad.mit.e...
Broad REACTOME_MRNA_SPLICING_MINOR_PATHWAY View Gene Set 0.001368 38 0.009644 59 Genes involved in mRNA Splicing - Minor Pathway www.broad.mit.e...
Broad REACTOME_STABILIZATION_OF_P53 View Gene Set 0.001401 46 0.009719 62 Genes involved in Stabilization of p53 www.broad.mit.e...
Broad REACTOME_TRNA_AMINOACYLATION View Gene Set 0.001432 40 0.009777 63 Genes involved in tRNA Aminoacylation www.broad.mit.e...
Broad REACTOME_GLOBAL_GENOMIC_NER View Gene Set 0.001545 33 0.01038 64 Genes involved in Global Genomic NER (GG-NER) www.broad.mit.e...
Broad REACTOME_REPAIR_SYNTHESIS_OF_PATCH_27_30_BASES_LONG_BY_DNA_POLYMERASE View Gene Set 0.001895 15 0.01254 65 Genes involved in Repair synthesis of patch ~27-30 bases long by DNA polymerase www.broad.mit.e...
Broad REACTOME_RNA_POLYMERASE_I_TRANSCRIPTION_INITIATION View Gene Set 0.002069 24 0.01348 66 Genes involved in RNA PolymeraseTranscription Initiation www.broad.mit.e...
Broad REACTOME_CDC6_ASSOCIATION_WITH_THE_ORC:ORIGIN_COMPLEX View Gene Set 0.002167 11 0.01391 67 Genes involved in CDC6 association with the ORC:origin complex www.broad.mit.e...
Broad REACTOME_NUCLEOTIDE_EXCISION_REPAIR View Gene Set 0.002403 49 0.01519 68 Genes involved in Nucleotide Excision Repair www.broad.mit.e...
Broad REACTOME_RNA_POLYMERASE_III_TRANSCRIPTION View Gene Set 0.003328 34 0.02074 69 Genes involved in RNA Polymerase III Transcription www.broad.mit.e...
Broad REACTOME_E2F_TRANSCRIPTIONAL_TARGETS_AT_G1_S View Gene Set 0.003574 22 0.021 70 Genes involved in E2F transcriptional targets at G1/S www.broad.mit.e...
Broad REACTOME_ELECTRON_TRANSPORT_CHAIN View Gene Set 0.00357 75 0.021 70 Genes involved in Electron Transport Chain www.broad.mit.e...
Broad REACTOME_HIV1_TRANSCRIPTION_INITIATION View Gene Set 0.003659 39 0.021 70 Genes involved in HIV-1 Transcription Initiation www.broad.mit.e...
Broad REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS View Gene Set 0.003547 120 0.021 70 Genes involved in Host Interactions of HIV factors www.broad.mit.e...
Broad REACTOME_METABLISM_OF_NUCLEOTIDES View Gene Set 0.003577 71 0.021 70 Genes involved in Metablism of nucleotides www.broad.mit.e...
Broad REACTOME_TRANSCRIPTION_OF_THE_HIV_GENOME View Gene Set 0.003662 59 0.021 70 Genes involved in Transcription of the HIV genome www.broad.mit.e...
Broad REACTOME_RNA_POLYMERASE_III_TRANSCRIPTION_TERMINATION View Gene Set 0.0044 17 0.02489 76 Genes involved in RNA Polymerase III Transcription Termination www.broad.mit.e...
Broad REACTOME_CONVERSION_FROM_APC_CDC20_TO_APC_CDH1_IN_LATE_ANAPHASE View Gene Set 0.004668 17 0.02607 77 Genes involved in Conversion from APC/C:Cdc20 to APC/C:Cdh1 in late anaphase www.broad.mit.e...
Broad REACTOME_SCF_SKP2_MEDIATED_DEGRADATION_OF_P27_P21 View Gene Set 0.004746 52 0.02617 78 Genes involved in SCF(Skp2)-mediated degradation of p2721 www.broad.mit.e...
Broad REACTOME_GENERIC_TRANSCRIPTION_PATHWAY View Gene Set 0.005276 35 0.02801 79 Genes involved in Generic Transcription Pathway www.broad.mit.e...
Broad REACTOME_HOMOLOGOUS_RECOMBINATION_REPAIR View Gene Set 0.005165 15 0.02801 79 Genes involved in Homologous Recombination Repair www.broad.mit.e...
Broad REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS View Gene Set 0.00527 42 0.02801 79 Genes involved in Metabolism of vitamins and cofactors www.broad.mit.e...
Broad REACTOME_TRANSCRIPTION_COUPLED_NER View Gene Set 0.006768 44 0.03549 82 Genes involved in Transcription-coupled NER (TC-NER) www.broad.mit.e...

Gene Set Collection: Broad.c3.MIR

Arguments: refPop=all, featureType=featureNames, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad ATGTTAA MIR-302C View Gene Set 5.428e-06 206 0.0012 1 Targets of MicroRNA ATGTTAA MIR-302C www.broad.mit.e... MIR-302C...
Broad TTTGTAG MIR-520D View Gene Set 2.347e-05 279 0.002594 2 Targets of MicroRNA TTTGTAG MIR-520D www.broad.mit.e... MIR-520D...
Broad TTTGCAG MIR-518A-2 View Gene Set 3.687e-05 174 0.002716 3 Targets of MicroRNA TTTGCAG MIR-518A-2 www.broad.mit.e... MIR-518A-2...
Broad AGCACTT MIR-93 MIR-302A MIR-302B MIR-302C MIR-302D MIR-372 MIR-373 MIR-520E MIR-520A MIR-526B MIR-520B MIR-520C MIR-520D View Gene Set 5.855e-05 281 0.003235 4 Targets of MicroRNA AGCACTT MIR-93 MIR-302A MIR-302B MIR-302C MIR-302D MIR-372 MIR-373 MIR-520E MIR-520A MIR-526B MIR-520B MIR-520C MIR-520D www.broad.mit.e... MIR-93... MIR-302A... MIR-302B... MIR-302C... MIR-302D... MIR-372... MIR-373... MIR-520E... MIR-520A... MIR-526B... MIR-520B... MIR-520C... MIR-520D...
Broad TGTGTGA MIR-377 View Gene Set 0.0001103 162 0.004875 5 Targets of MicroRNA TGTGTGA MIR-377 www.broad.mit.e... MIR-377...
Broad TACTTGA MIR-26A MIR-26B View Gene Set 0.0001593 258 0.005732 6 Targets of MicroRNA TACTTGA MIR-26A MIR-26B www.broad.mit.e... MIR-26A... MIR-26B...
Broad TCTATGA MIR-376A MIR-376B View Gene Set 0.0002075 71 0.005732 6 Targets of MicroRNA TCTATGA MIR-376A MIR-376B www.broad.mit.e... MIR-376A... MIR-376B...
Broad GTAAACC MIR-299-5P View Gene Set 0.000188 44 0.005732 6 Targets of MicroRNA GTAAACC MIR-299-5P www.broad.mit.e... MIR-299-5P...
Broad ATTCTTT MIR-186 View Gene Set 0.0002355 232 0.005784 9 Targets of MicroRNA ATTCTTT MIR-186 www.broad.mit.e... MIR-186...
Broad ACACTAC MIR-142-3P View Gene Set 0.0005664 110 0.01252 10 Targets of MicroRNA ACACTAC MIR-142-3P www.broad.mit.e... MIR-142-3P...
Broad TGTTTAC MIR-30A-5P MIR-30C MIR-30D MIR-30B MIR-30E-5P View Gene Set 0.0007349 492 0.01476 11 Targets of MicroRNA TGTTTAC MIR-30A-5P MIR-30C MIR-30D MIR-30B MIR-30E-5P www.broad.mit.e... MIR-30A-5P... MIR-30C... MIR-30D... MIR-30B... MIR-30E-5P...
Broad ATGTACA MIR-493 View Gene Set 0.0008318 261 0.01514 12 Targets of MicroRNA ATGTACA MIR-493 www.broad.mit.e... MIR-493...
Broad TAATGTG MIR-323 View Gene Set 0.0008905 135 0.01514 12 Targets of MicroRNA TAATGTG MIR-323 www.broad.mit.e... MIR-323...
Broad AATGTGA MIR-23A MIR-23B View Gene Set 0.0009603 356 0.01516 14 Targets of MicroRNA AATGTGA MIR-23A MIR-23B www.broad.mit.e... MIR-23A... MIR-23B...
Broad ATACTGT MIR-144 View Gene Set 0.001096 173 0.01572 15 Targets of MicroRNA ATACTGT MIR-144 www.broad.mit.e... MIR-144...
Broad CTTTGTA MIR-524 View Gene Set 0.001138 375 0.01572 15 Targets of MicroRNA CTTTGTA MIR-524 www.broad.mit.e... MIR-524...
Broad TGAATGT MIR-181A MIR-181B MIR-181C MIR-181D View Gene Set 0.001413 418 0.01837 17 Targets of MicroRNA TGAATGT MIR-181A MIR-181B MIR-181C MIR-181D www.broad.mit.e... MIR-181A... MIR-181B... MIR-181C... MIR-181D...
Broad GTAAGAT MIR-200A View Gene Set 0.001731 44 0.02125 18 Targets of MicroRNA GTAAGAT MIR-200A www.broad.mit.e... MIR-200A...
Broad ACTTTAT MIR-142-5P View Gene Set 0.002524 250 0.02935 19 Targets of MicroRNA ACTTTAT MIR-142-5P www.broad.mit.e... MIR-142-5P...
Broad TAGCTTT MIR-9 View Gene Set 0.003097 198 0.03422 20 Targets of MicroRNA TAGCTTT MIR-9 www.broad.mit.e... MIR-9...

Gene Set Collection: Broad.c3.TFT

Arguments: refPop=all, featureType=featureNames, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad RCGCANGCGY_V$NRF1_Q6 View Gene Set 7.832e-11 580 4.817e-08 1 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif RCGCANGCGY which matches annotation for NRF1: nuclear respiratory factor 1 www.broad.mit.e...
Broad V$NFMUE1_Q6 View Gene Set 7.323e-07 175 0.0002216 2 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif CGGCCATCT. Motif does not match any known transcription factor www.broad.mit.e...
Broad SCGGAAGY_V$ELK1_02 View Gene Set 1.081e-06 784 0.0002216 2 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif SCGGAAGY which matches annotation for ELK1: ELK1 member of ETS oncogene family www.broad.mit.e...
Broad TAANNYSGCG_UNKNOWN View Gene Set 1.119e-05 60 0.00172 4 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif TAANNYSGCG. Motif does not match any known transcription factor www.broad.mit.e...
Broad TCCCRNNRTGC_UNKNOWN View Gene Set 0.0002203 130 0.02311 5 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif TCCCRNNRTGC. Motif does not match any known transcription factor www.broad.mit.e...
Broad GCCATNTTG_V$YY1_Q6 View Gene Set 0.0002254 289 0.02311 5 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GCCATNTTG which matches annotation for YY1: YY1 transcription factor www.broad.mit.e...
Broad V$E2F1_Q4 View Gene Set 0.000467 178 0.02872 7 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NTTSGCGG which matches annotation for E2F1: E2F transcription factor 1 www.broad.mit.e...
Broad GATGKMRGCG_UNKNOWN View Gene Set 0.0004637 47 0.02872 7 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif GATGKMRGCG. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$E2F_Q3_01 View Gene Set 0.0004304 171 0.02872 7 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TTTSGCGSG which matches annotation for E2F<br> TFDP1: transcription factor Dp-1 www.broad.mit.e...
Broad V$E2F1_Q4_01 View Gene Set 0.0003478 167 0.02872 7 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TTTSGCGSG which matches annotation for E2F<br> TFDP1: transcription factor Dp-1 www.broad.mit.e...
Broad V$E2F_Q6 View Gene Set 0.0005709 165 0.02926 11 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif TTTSGCGS. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$E2F_Q6_01 View Gene Set 0.0005659 167 0.02926 11 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NKCGCGCSAAAN which matches annotation for E2F<br> TFDP1: transcription factor Dp-1 www.broad.mit.e...
Broad V$E2F_Q4 View Gene Set 0.0008218 166 0.03624 13 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif TTTSGCGS. Motif does not match any known transcription factor www.broad.mit.e...
Broad GCGSCMNTTT_UNKNOWN View Gene Set 0.0008802 49 0.03624 13 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif GCGSCMNTTT. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$E2F_Q4_01 View Gene Set 0.000884 171 0.03624 13 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NCSCGCSAAAN which matches annotation for E2F<br> TFDP1: transcription factor Dp-1 www.broad.mit.e...
Broad V$E2F1_Q6_01 View Gene Set 0.001189 177 0.0457 16 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NTTTCGCGCS which matches annotation for E2F1: E2F transcription factor 1 www.broad.mit.e...
Broad V$E2F1_Q6 View Gene Set 0.001287 167 0.04658 17 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TTTSGCGS which matches annotation for E2F1: E2F transcription factor 1 www.broad.mit.e...
Broad TMTCGCGANR_UNKNOWN View Gene Set 0.001377 100 0.04705 18 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif TMTCGCGANR. Motif does not match any known transcription factor www.broad.mit.e...
Broad GGCNKCCATNK_UNKNOWN View Gene Set 0.001454 84 0.04706 19 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif GGCNKCCATNK. Motif does not match any known transcription factor www.broad.mit.e...

Gene Set Collection: Broad.c4.CGN

Arguments: refPop=all, featureType=featureNames, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad GNF2_SMC4L1 View Gene Set 2.15e-17 75 9.181e-15 1 Neighborhood of SMC4L1 www.broad.mit.e...
Broad GNF2_RRM1 View Gene Set 3.279e-16 82 7e-14 2 Neighborhood of RRM1 www.broad.mit.e...
Broad GNF2_DEK View Gene Set 6.025e-16 45 8.576e-14 3 Neighborhood of DEK www.broad.mit.e...
Broad MORF_HDAC2 View Gene Set 1.899e-15 256 2.027e-13 4 Neighborhood of HDAC2 www.broad.mit.e...
Broad MORF_BUB3 View Gene Set 1.581e-14 256 1.35e-12 5 Neighborhood of BUB3 www.broad.mit.e...
Broad MORF_RFC4 View Gene Set 2.775e-14 137 1.975e-12 6 Neighborhood of RFC4 www.broad.mit.e...
Broad GNF2_APEX1 View Gene Set 5.432e-14 72 3.314e-12 7 Neighborhood of APEX1 www.broad.mit.e...
Broad GNF2_PCNA View Gene Set 8.142e-14 62 4.346e-12 8 Neighborhood of PCNA www.broad.mit.e...
Broad MORF_RAD23A View Gene Set 9.268e-14 316 4.397e-12 9 Neighborhood of RAD23A www.broad.mit.e...
Broad GNF2_RBBP6 View Gene Set 1.247e-13 54 5.324e-12 10 Neighborhood of RBBP6 www.broad.mit.e...
Broad GNF2_FEN1 View Gene Set 9.756e-13 49 3.787e-11 11 Neighborhood of FEN1 www.broad.mit.e...
Broad GNF2_KPNB1 View Gene Set 1.174e-12 52 4.177e-11 12 Neighborhood of KPNB1 www.broad.mit.e...
Broad GNF2_PA2G4 View Gene Set 4.76e-12 73 1.563e-10 13 Neighborhood of PA2G4 www.broad.mit.e...
Broad GNF2_RAN View Gene Set 7.081e-12 78 2.16e-10 14 Neighborhood of RAN www.broad.mit.e...
Broad GNF2_HMMR View Gene Set 1.032e-11 43 2.939e-10 15 Neighborhood of HMMR www.broad.mit.e...
Broad GNF2_CDC2 View Gene Set 1.233e-11 56 3.135e-10 16 Neighborhood of CDC2 www.broad.mit.e...
Broad GNF2_MCM5 View Gene Set 1.248e-11 51 3.135e-10 16 Neighborhood of MCM5 www.broad.mit.e...
Broad GNF2_CCNA2 View Gene Set 1.715e-11 62 4.068e-10 18 Neighborhood of CCNA2 www.broad.mit.e...
Broad GNF2_DENR View Gene Set 4.803e-11 39 1.079e-09 19 Neighborhood of DENR www.broad.mit.e...
Broad GNF2_CCNB2 View Gene Set 5.062e-11 53 1.081e-09 20 Neighborhood of CCNB2 www.broad.mit.e...
Broad GNF2_CENPF View Gene Set 9.302e-11 56 1.874e-09 21 Neighborhood of CENPF www.broad.mit.e...
Broad GNF2_XRCC5 View Gene Set 9.657e-11 61 1.874e-09 21 Neighborhood of XRCC5 www.broad.mit.e...
Broad GNF2_PPP6C View Gene Set 1.056e-10 33 1.961e-09 23 Neighborhood of PPP6C www.broad.mit.e...
Broad GNF2_NPM1 View Gene Set 1.241e-10 57 2.208e-09 24 Neighborhood of NPM1 www.broad.mit.e...
Broad MORF_GNB1 View Gene Set 2.945e-10 276 5.03e-09 25 Neighborhood of GNB1 www.broad.mit.e...
Broad GNF2_MCM4 View Gene Set 3.195e-10 50 5.247e-09 26 Neighborhood of MCM4 www.broad.mit.e...
Broad MORF_PRKDC View Gene Set 4.296e-10 173 6.794e-09 27 Neighborhood of PRKDC www.broad.mit.e...
Broad MORF_PPP1CC View Gene Set 4.736e-10 150 7.223e-09 28 Neighborhood of PPP1CC www.broad.mit.e...
Broad MORF_XRCC5 View Gene Set 5.68e-10 210 8.364e-09 29 Neighborhood of XRCC5 www.broad.mit.e...
Broad MORF_EIF3S2 View Gene Set 6.296e-10 220 8.962e-09 30 Neighborhood of EIF3S2 www.broad.mit.e...
Broad MORF_RAD21 View Gene Set 7.246e-10 157 9.981e-09 31 Neighborhood of RAD21 www.broad.mit.e...
Broad GNF2_HDAC1 View Gene Set 7.538e-10 85 1.006e-08 32 Neighborhood of HDAC1 www.broad.mit.e...
Broad MORF_HAT1 View Gene Set 1.101e-09 155 1.424e-08 33 Neighborhood of HAT1 www.broad.mit.e...
Broad GCM_UBE2N View Gene Set 1.23e-09 125 1.545e-08 34 Neighborhood of UBE2N www.broad.mit.e...
Broad MORF_SOD1 View Gene Set 1.424e-09 247 1.738e-08 35 Neighborhood of SOD1 www.broad.mit.e...
Broad GNF2_CDC20 View Gene Set 1.688e-09 52 2.002e-08 36 Neighborhood of CDC20 www.broad.mit.e...
Broad GNF2_CKS2 View Gene Set 2.026e-09 45 2.338e-08 37 Neighborhood of CKS2 www.broad.mit.e...
Broad GNF2_RFC4 View Gene Set 2.258e-09 57 2.537e-08 38 Neighborhood of RFC4 www.broad.mit.e...
Broad MORF_EIF4E View Gene Set 2.722e-09 76 2.98e-08 39 Neighborhood of EIF4E www.broad.mit.e...
Broad GNF2_ESPL1 View Gene Set 2.972e-09 35 3.173e-08 40 Neighborhood of ESPL1 www.broad.mit.e...
Broad GNF2_HAT1 View Gene Set 3.941e-09 45 4.007e-08 41 Neighborhood of HAT1 www.broad.mit.e...
Broad GNF2_DAP3 View Gene Set 3.908e-09 98 4.007e-08 41 Neighborhood of DAP3 www.broad.mit.e...
Broad MORF_PTPN11 View Gene Set 6.023e-09 93 5.845e-08 43 Neighborhood of PTPN11 www.broad.mit.e...
Broad GNF2_FBL View Gene Set 6.01e-09 119 5.845e-08 43 Neighborhood of FBL www.broad.mit.e...
Broad MORF_DEK View Gene Set 7.703e-09 229 7.309e-08 45 Neighborhood of DEK www.broad.mit.e...
Broad MORF_SP3 View Gene Set 9.248e-09 69 8.584e-08 46 Neighborhood of SP3 www.broad.mit.e...
Broad GNF2_TTK View Gene Set 1.027e-08 34 9.332e-08 47 Neighborhood of TTK www.broad.mit.e...
Broad MORF_MSH2 View Gene Set 1.383e-08 52 1.231e-07 48 Neighborhood of MSH2 www.broad.mit.e...
Broad MORF_RRM1 View Gene Set 2.658e-08 90 2.316e-07 49 Neighborhood of RRM1 www.broad.mit.e...
Broad MORF_CCNF View Gene Set 3.436e-08 65 2.934e-07 50 Neighborhood of CCNF www.broad.mit.e...
Broad MORF_RAB11A View Gene Set 3.514e-08 53 2.942e-07 51 Neighborhood of RAB11A www.broad.mit.e...
Broad GCM_MYST2 View Gene Set 3.591e-08 138 2.949e-07 52 Neighborhood of MYST2 www.broad.mit.e...
Broad GNF2_TDG View Gene Set 3.855e-08 23 3.105e-07 53 Neighborhood of TDG www.broad.mit.e...
Broad MORF_AATF View Gene Set 4.698e-08 179 3.715e-07 54 Neighborhood of AATF www.broad.mit.e...
Broad GCM_RAB10 View Gene Set 4.966e-08 143 3.856e-07 55 Neighborhood of RAB10 www.broad.mit.e...
Broad GNF2_RRM2 View Gene Set 5.716e-08 36 4.358e-07 56 Neighborhood of RRM2 www.broad.mit.e...
Broad GNF2_BUB1B View Gene Set 5.931e-08 46 4.443e-07 57 Neighborhood of BUB1B www.broad.mit.e...
Broad GNF2_ANP32B View Gene Set 8.051e-08 29 5.927e-07 58 Neighborhood of ANP32B www.broad.mit.e...
Broad MORF_DNMT1 View Gene Set 9.545e-08 105 6.908e-07 59 Neighborhood of DNMT1 www.broad.mit.e...
Broad MORF_RPA1 View Gene Set 1.149e-07 55 8.179e-07 60 Neighborhood of RPA1 www.broad.mit.e...
Broad MORF_ACP1 View Gene Set 1.239e-07 178 8.675e-07 61 Neighborhood of ACP1 www.broad.mit.e...
Broad GCM_HBP1 View Gene Set 1.4e-07 54 9.643e-07 62 Neighborhood of HBP1 www.broad.mit.e...
Broad MORF_RAD54L View Gene Set 1.897e-07 94 1.266e-06 63 Neighborhood of RAD54L www.broad.mit.e...
Broad GCM_DFFA View Gene Set 1.897e-07 100 1.266e-06 63 Neighborhood of DFFA www.broad.mit.e...
Broad MORF_PCNA View Gene Set 3.004e-07 71 1.973e-06 65 Neighborhood of PCNA www.broad.mit.e...
Broad GNF2_CENPE View Gene Set 3.185e-07 37 2.061e-06 66 Neighborhood of CENPE www.broad.mit.e...
Broad GCM_MAX View Gene Set 3.728e-07 28 2.376e-06 67 Neighborhood of MAX www.broad.mit.e...
Broad MORF_UBE2N View Gene Set 6.388e-07 79 4.011e-06 68 Neighborhood of UBE2N www.broad.mit.e...
Broad MORF_PPP2R5E View Gene Set 6.688e-07 76 4.139e-06 69 Neighborhood of PPP2R5E www.broad.mit.e...
Broad GNF2_ELAC2 View Gene Set 7.258e-07 32 4.427e-06 70 Neighborhood of ELAC2 www.broad.mit.e...
Broad MORF_REV3L View Gene Set 7.74e-07 52 4.655e-06 71 Neighborhood of REV3L www.broad.mit.e...
Broad MORF_DAP3 View Gene Set 9.375e-07 175 5.56e-06 72 Neighborhood of DAP3 www.broad.mit.e...
Broad MORF_UNG View Gene Set 1.015e-06 65 5.937e-06 73 Neighborhood of UNG www.broad.mit.e...
Broad MORF_CSNK2B View Gene Set 1.037e-06 256 5.985e-06 74 Neighborhood of CSNK2B www.broad.mit.e...
Broad MORF_PRDX3 View Gene Set 1.119e-06 79 6.373e-06 75 Neighborhood of PRDX3 www.broad.mit.e...
Broad MORF_RAD23B View Gene Set 1.155e-06 159 6.488e-06 76 Neighborhood of RAD23B www.broad.mit.e...
Broad GNF2_RFC3 View Gene Set 1.363e-06 38 7.557e-06 77 Neighborhood of RFC3 www.broad.mit.e...
Broad MORF_BUB1B View Gene Set 1.41e-06 61 7.721e-06 78 Neighborhood of BUB1B www.broad.mit.e...
Broad GNF2_MSH2 View Gene Set 1.492e-06 26 8.063e-06 79 Neighborhood of MSH2 www.broad.mit.e...
Broad MORF_EI24 View Gene Set 1.764e-06 136 9.417e-06 80 Neighborhood of EI24 www.broad.mit.e...
Broad MORF_SMC1L1 View Gene Set 1.984e-06 47 1.046e-05 81 Neighborhood of SMC1L1 www.broad.mit.e...
Broad GNF2_MLH1 View Gene Set 2.401e-06 36 1.25e-05 82 Neighborhood of MLH1 www.broad.mit.e...
Broad MORF_MBD4 View Gene Set 2.771e-06 76 1.426e-05 83 Neighborhood of MBD4 www.broad.mit.e...
Broad GCM_MLL View Gene Set 3.476e-06 130 1.767e-05 84 Neighborhood of MLL www.broad.mit.e...
Broad MORF_FBL View Gene Set 3.737e-06 121 1.877e-05 85 Neighborhood of FBL www.broad.mit.e...
Broad MORF_G22P1 View Gene Set 4.042e-06 145 2.007e-05 86 Neighborhood of G22P1 www.broad.mit.e...
Broad GCM_ZNF198 View Gene Set 4.744e-06 98 2.305e-05 87 Neighborhood of ZNF198 www.broad.mit.e...
Broad GNF2_SMC2L1 View Gene Set 4.75e-06 30 2.305e-05 87 Neighborhood of SMC2L1 www.broad.mit.e...
Broad MORF_PPP6C View Gene Set 5.193e-06 88 2.492e-05 89 Neighborhood of PPP6C www.broad.mit.e...
Broad GNF2_H2AFX View Gene Set 5.654e-06 28 2.682e-05 90 Neighborhood of H2AFX www.broad.mit.e...
Broad MORF_GSPT1 View Gene Set 5.888e-06 41 2.733e-05 91 Neighborhood of GSPT1 www.broad.mit.e...
Broad GNF2_NS View Gene Set 5.875e-06 35 2.733e-05 91 Neighborhood of NS www.broad.mit.e...
Broad MORF_CDC10 View Gene Set 1.267e-05 120 5.723e-05 93 Neighborhood of CDC10 www.broad.mit.e...
Broad MORF_PPP2CA View Gene Set 1.273e-05 110 5.723e-05 93 Neighborhood of PPP2CA www.broad.mit.e...
Broad GNF2_MSH6 View Gene Set 1.256e-05 30 5.723e-05 93 Neighborhood of MSH6 www.broad.mit.e...
Broad GNF2_G22P1 View Gene Set 1.317e-05 29 5.857e-05 96 Neighborhood of G22P1 www.broad.mit.e...
Broad MORF_DEAF1 View Gene Set 1.399e-05 54 6.159e-05 97 Neighborhood of DEAF1 www.broad.mit.e...
Broad MORF_PSMC2 View Gene Set 1.479e-05 100 6.442e-05 98 Neighborhood of PSMC2 www.broad.mit.e...
Broad GNF2_MKI67 View Gene Set 1.693e-05 26 7.3e-05 99 Neighborhood of MKI67 www.broad.mit.e...
Broad GNF2_BUB1 View Gene Set 1.806e-05 25 7.712e-05 100 Neighborhood of BUB1 www.broad.mit.e...
Broad GCM_NF2 View Gene Set 1.862e-05 235 7.874e-05 101 Neighborhood of NF2 www.broad.mit.e...
Broad MORF_AP3D1 View Gene Set 1.958e-05 119 8.196e-05 102 Neighborhood of AP3D1 www.broad.mit.e...
Broad MORF_CDC16 View Gene Set 2.013e-05 67 8.345e-05 103 Neighborhood of CDC16 www.broad.mit.e...
Broad MORF_PSMC1 View Gene Set 2.557e-05 162 0.000105 104 Neighborhood of PSMC1 www.broad.mit.e...
Broad GNF2_RPA1 View Gene Set 3.043e-05 20 0.0001238 105 Neighborhood of RPA1 www.broad.mit.e...
Broad MORF_BUB1 View Gene Set 3.107e-05 49 0.0001252 106 Neighborhood of BUB1 www.broad.mit.e...
Broad MORF_GMPS View Gene Set 4.605e-05 48 0.0001838 107 Neighborhood of GMPS www.broad.mit.e...
Broad GCM_CHUK View Gene Set 6.619e-05 61 0.0002617 108 Neighborhood of CHUK www.broad.mit.e...
Broad GNF2_CKS1B View Gene Set 7.012e-05 36 0.0002747 109 Neighborhood of CKS1B www.broad.mit.e...
Broad MORF_HDAC1 View Gene Set 7.267e-05 222 0.0002821 110 Neighborhood of HDAC1 www.broad.mit.e...
Broad MORF_CUL1 View Gene Set 7.514e-05 62 0.000289 111 Neighborhood of CUL1 www.broad.mit.e...
Broad GCM_CBFB View Gene Set 9.385e-05 59 0.0003578 112 Neighborhood of CBFB www.broad.mit.e...
Broad GCM_PPP1CC View Gene Set 9.847e-05 47 0.0003721 113 Neighborhood of PPP1CC www.broad.mit.e...
Broad GCM_GSPT1 View Gene Set 0.0001399 129 0.0005241 114 Neighborhood of GSPT1 www.broad.mit.e...
Broad GCM_PSME1 View Gene Set 0.0001449 76 0.0005379 115 Neighborhood of PSME1 www.broad.mit.e...
Broad GNF2_DDX5 View Gene Set 0.0001713 54 0.0006305 116 Neighborhood of DDX5 www.broad.mit.e...
Broad GCM_BAG5 View Gene Set 0.000189 26 0.0006899 117 Neighborhood of BAG5 www.broad.mit.e...
Broad MORF_ANP32B View Gene Set 0.0002539 174 0.0009167 118 Neighborhood of ANP32B www.broad.mit.e...
Broad GCM_CSNK1A1 View Gene Set 0.0002555 28 0.0009167 118 Neighborhood of CSNK1A1 www.broad.mit.e...
Broad MORF_EIF3S6 View Gene Set 0.0002622 108 0.0009331 120 Neighborhood of EIF3S6 www.broad.mit.e...
Broad GNF2_SMC1L1 View Gene Set 0.0003062 24 0.001081 121 Neighborhood of SMC1L1 www.broad.mit.e...
Broad MORF_PPP5C View Gene Set 0.0003958 81 0.001374 122 Neighborhood of PPP5C www.broad.mit.e...
Broad MORF_SKP1A View Gene Set 0.0003939 175 0.001374 122 Neighborhood of SKP1A www.broad.mit.e...
Broad MORF_RAF1 View Gene Set 0.0004178 94 0.001439 124 Neighborhood of RAF1 www.broad.mit.e...
Broad GCM_ERBB2IP View Gene Set 0.000429 57 0.001465 125 Neighborhood of ERBB2IP www.broad.mit.e...
Broad MORF_CTBP1 View Gene Set 0.0004452 149 0.001509 126 Neighborhood of CTBP1 www.broad.mit.e...
Broad MORF_FEN1 View Gene Set 0.000498 58 0.001674 127 Neighborhood of FEN1 www.broad.mit.e...
Broad GCM_DDX5 View Gene Set 0.000542 52 0.001808 128 Neighborhood of DDX5 www.broad.mit.e...
Broad GCM_APEX1 View Gene Set 0.0005977 102 0.001979 129 Neighborhood of APEX1 www.broad.mit.e...
Broad MORF_BAG5 View Gene Set 0.0006154 48 0.002021 130 Neighborhood of BAG5 www.broad.mit.e...
Broad MORF_TERF2IP View Gene Set 0.0008323 99 0.002713 131 Neighborhood of TERF2IP www.broad.mit.e...
Broad MORF_ESPL1 View Gene Set 0.0009011 58 0.002915 132 Neighborhood of ESPL1 www.broad.mit.e...
Broad MORF_PRKAG1 View Gene Set 0.0009093 202 0.002919 133 Neighborhood of PRKAG1 www.broad.mit.e...
Broad MORF_SS18 View Gene Set 0.0009209 55 0.002935 134 Neighborhood of SS18 www.broad.mit.e...
Broad MORF_RFC1 View Gene Set 0.001054 98 0.003335 135 Neighborhood of RFC1 www.broad.mit.e...
Broad GCM_SUFU View Gene Set 0.001224 62 0.003842 136 Neighborhood of SUFU www.broad.mit.e...
Broad GCM_DENR View Gene Set 0.001822 40 0.00568 137 Neighborhood of DENR www.broad.mit.e...
Broad MORF_MAP2K2 View Gene Set 0.002355 123 0.007286 138 Neighborhood of MAP2K2 www.broad.mit.e...
Broad MORF_RAP1A View Gene Set 0.002602 122 0.007994 139 Neighborhood of RAP1A www.broad.mit.e...
Broad MORF_MTA1 View Gene Set 0.002663 95 0.008121 140 Neighborhood of MTA1 www.broad.mit.e...
Broad MORF_ATRX View Gene Set 0.002905 185 0.008799 141 Neighborhood of ATRX www.broad.mit.e...
Broad MORF_RAN View Gene Set 0.002977 242 0.008953 142 Neighborhood of RAN www.broad.mit.e...
Broad MORF_DDB1 View Gene Set 0.004175 220 0.01247 143 Neighborhood of DDB1 www.broad.mit.e...
Broad GNF2_EIF3S6 View Gene Set 0.004309 109 0.01278 144 Neighborhood of EIF3S6 www.broad.mit.e...
Broad GCM_ANP32B View Gene Set 0.004521 32 0.01317 145 Neighborhood of ANP32B www.broad.mit.e...
Broad GCM_CRKL View Gene Set 0.004487 50 0.01317 145 Neighborhood of CRKL www.broad.mit.e...
Broad GNF2_BUB3 View Gene Set 0.004534 22 0.01317 145 Neighborhood of BUB3 www.broad.mit.e...
Broad MORF_ERH View Gene Set 0.004612 103 0.01331 148 Neighborhood of ERH www.broad.mit.e...
Broad GNF2_BNIP2 View Gene Set 0.004862 31 0.01393 149 Neighborhood of BNIP2 www.broad.mit.e...
Broad MORF_RAC1 View Gene Set 0.005014 196 0.01427 150 Neighborhood of RAC1 www.broad.mit.e...
Broad MORF_RFC5 View Gene Set 0.005282 69 0.01494 151 Neighborhood of RFC5 www.broad.mit.e...
Broad GCM_DEAF1 View Gene Set 0.005395 23 0.01516 152 Neighborhood of DEAF1 www.broad.mit.e...
Broad MORF_CDK2 View Gene Set 0.005438 63 0.01518 153 Neighborhood of CDK2 www.broad.mit.e...
Broad MORF_PAPSS1 View Gene Set 0.005723 98 0.01587 154 Neighborhood of PAPSS1 www.broad.mit.e...
Broad MORF_UBE2I View Gene Set 0.006786 208 0.01869 155 Neighborhood of UBE2I www.broad.mit.e...
Broad GCM_NCAM1 View Gene Set 0.007422 111 0.02032 156 Neighborhood of NCAM1 www.broad.mit.e...
Broad MORF_CCNI View Gene Set 0.007723 76 0.02101 157 Neighborhood of CCNI www.broad.mit.e...
Broad GNF2_ST13 View Gene Set 0.00779 56 0.02105 158 Neighborhood of ST13 www.broad.mit.e...
Broad MORF_SNRP70 View Gene Set 0.009795 50 0.0263 159 Neighborhood of SNRP70 www.broad.mit.e...
Broad MORF_PPP1CA View Gene Set 0.009929 145 0.0265 160 Neighborhood of PPP1CA www.broad.mit.e...
Broad MORF_RAB5A View Gene Set 0.01029 83 0.0273 161 Neighborhood of RAB5A www.broad.mit.e...
Broad MORF_XPC View Gene Set 0.01284 55 0.03383 162 Neighborhood of XPC www.broad.mit.e...
Broad MORF_PRKAR1A View Gene Set 0.013 133 0.03407 163 Neighborhood of PRKAR1A www.broad.mit.e...
Broad MORF_TPR View Gene Set 0.01333 131 0.0347 164 Neighborhood of TPR www.broad.mit.e...
Broad GNF2_UBE2I View Gene Set 0.01373 33 0.03553 165 Neighborhood of UBE2I www.broad.mit.e...
Broad MORF_EIF4A2 View Gene Set 0.0168 120 0.0432 166 Neighborhood of EIF4A2 www.broad.mit.e...

Gene Set Collection: Broad.c4.CM

Arguments: refPop=all, featureType=featureNames, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad module_8 View Gene Set 9.22e-21 403 4.186e-18 1 Genes in module_8 www.broad.mit.e...
Broad module_98 View Gene Set 1.722e-13 375 3.909e-11 2 Genes in module_98 www.broad.mit.e...
Broad module_252 View Gene Set 3.865e-13 224 5.849e-11 3 Genes in module_252 www.broad.mit.e...
Broad module_198 View Gene Set 6.935e-12 288 7.871e-10 4 Genes in module_198 www.broad.mit.e...
Broad module_3 View Gene Set 1.097e-11 374 9.964e-10 5 Genes in module_3 www.broad.mit.e...
Broad module_183 View Gene Set 1.5e-11 52 1.135e-09 6 Genes in module_183 www.broad.mit.e...
Broad module_54 View Gene Set 3.76e-11 242 2.439e-09 7 Genes in module_54 www.broad.mit.e...
Broad module_17 View Gene Set 2.742e-07 351 1.556e-05 8 Genes in module_17 www.broad.mit.e...
Broad module_72 View Gene Set 3.762e-07 293 1.898e-05 9 Genes in module_72 www.broad.mit.e...
Broad module_197 View Gene Set 9.093e-06 170 0.0004128 10 Genes in module_197 www.broad.mit.e...
Broad module_36 View Gene Set 1.254e-05 146 0.0005175 11 Genes in module_36 www.broad.mit.e...
Broad module_278 View Gene Set 2.75e-05 34 0.00104 12 Genes in module_278 www.broad.mit.e...
Broad module_315 View Gene Set 3.455e-05 15 0.001206 13 Genes in module_315 www.broad.mit.e...
Broad module_32 View Gene Set 5.735e-05 227 0.00186 14 Genes in module_32 www.broad.mit.e...
Broad module_91 View Gene Set 7.062e-05 37 0.002004 15 Genes in module_91 www.broad.mit.e...
Broad module_323 View Gene Set 7.021e-05 54 0.002004 15 Genes in module_323 www.broad.mit.e...
Broad module_451 View Gene Set 8.821e-05 29 0.002356 17 Genes in module_451 www.broad.mit.e...
Broad module_332 View Gene Set 0.0001051 35 0.002652 18 Genes in module_332 www.broad.mit.e...
Broad module_244 View Gene Set 0.0001472 182 0.003412 19 Genes in module_244 www.broad.mit.e...
Broad module_352 View Gene Set 0.0001503 17 0.003412 19 Genes in module_352 www.broad.mit.e...
Broad module_158 View Gene Set 0.0001974 41 0.004116 21 Genes in module_158 www.broad.mit.e...
Broad module_534 View Gene Set 0.0001995 15 0.004116 21 Genes in module_534 www.broad.mit.e...
Broad module_28 View Gene Set 0.0003021 32 0.005715 23 Genes in module_28 www.broad.mit.e...
Broad module_337 View Gene Set 0.0002972 59 0.005715 23 Genes in module_337 www.broad.mit.e...
Broad module_189 View Gene Set 0.0003206 23 0.005822 25 Genes in module_189 www.broad.mit.e...
Broad module_388 View Gene Set 0.0003479 17 0.006075 26 Genes in module_388 www.broad.mit.e...
Broad module_125 View Gene Set 0.0005142 42 0.008646 27 Genes in module_125 www.broad.mit.e...
Broad module_52 View Gene Set 0.0006313 415 0.01024 28 Genes in module_52 www.broad.mit.e...
Broad module_105 View Gene Set 0.0008824 192 0.01381 29 Genes in module_105 www.broad.mit.e...
Broad module_155 View Gene Set 0.001113 25 0.01684 30 Genes in module_155 www.broad.mit.e...
Broad module_403 View Gene Set 0.001155 44 0.01692 31 Genes in module_403 www.broad.mit.e...
Broad module_124 View Gene Set 0.00122 92 0.01731 32 Genes in module_124 www.broad.mit.e...
Broad module_57 View Gene Set 0.001514 54 0.02021 33 Genes in module_57 www.broad.mit.e...
Broad module_245 View Gene Set 0.001491 26 0.02021 33 Genes in module_245 www.broad.mit.e...
Broad module_421 View Gene Set 0.001596 23 0.02041 35 Genes in module_421 www.broad.mit.e...
Broad module_552 View Gene Set 0.001619 18 0.02041 35 Genes in module_552 www.broad.mit.e...
Broad module_206 View Gene Set 0.002538 139 0.03114 37 Genes in module_206 www.broad.mit.e...
Broad module_127 View Gene Set 0.003296 26 0.03938 38 Genes in module_127 www.broad.mit.e...
Broad module_18 View Gene Set 0.003855 434 0.04143 39 Genes in module_18 www.broad.mit.e...
Broad module_25 View Gene Set 0.003654 13 0.04143 39 Genes in module_25 www.broad.mit.e...
Broad module_42 View Gene Set 0.003776 25 0.04143 39 Genes in module_42 www.broad.mit.e...
Broad module_277 View Gene Set 0.003758 48 0.04143 39 Genes in module_277 www.broad.mit.e...
Broad module_457 View Gene Set 0.003924 9 0.04143 39 Genes in module_457 www.broad.mit.e...

Gene Set Collection: Broad.c5.BP

Arguments: refPop=all, featureType=featureNames, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad NUCLEOBASENUCLEOSIDENUCLEOTIDE_AND_NUCLEIC_ACID_METABOLIC_PROCESS View Gene Set 3.259e-21 1197 2.689e-18 1 Genes annotated by the GO term GO:0006139. The chemical reactions and pathways involving nucleobases nucleosides nucleotides and nucleic acids. www.broad.mit.e...
Broad RNA_METABOLIC_PROCESS View Gene Set 6.516e-17 801 2.688e-14 2 Genes annotated by the GO term GO:0016070. The chemical reactions and pathways involving RNA ribonucleic acid one of the two main type of nucleic acid consisting of a long unbranched macromolecule formed from ribonucleotides joined in 3' 5'-phosphodiester linkage. www.broad.mit.e...
Broad RNA_PROCESSING View Gene Set 2.522e-15 147 6.934e-13 3 Genes annotated by the GO term GO:0006396. Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules. www.broad.mit.e...
Broad BIOPOLYMER_METABOLIC_PROCESS View Gene Set 1.505e-13 1623 3.104e-11 4 Genes annotated by the GO term GO:0043283. The chemical reactions and pathways involving biopolymers long repeating chains of monomers found in nature e.g. polysaccharides and proteins. www.broad.mit.e...
Broad RNA_SPLICING View Gene Set 6.663e-10 73 1.099e-07 5 Genes annotated by the GO term GO:0008380. The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA. www.broad.mit.e...
Broad DNA_METABOLIC_PROCESS View Gene Set 2.752e-09 253 3.784e-07 6 Genes annotated by the GO term GO:0006259. The chemical reactions and pathways involving DNA deoxyribonucleic acid one of the two main types of nucleic acid consisting of a long unbranched macromolecule formed from one or more commonly two strands of linked deoxyribonucleotides. www.broad.mit.e...
Broad RIBONUCLEOPROTEIN_COMPLEX_BIOGENESIS_AND_ASSEMBLY View Gene Set 3.502e-08 74 4.127e-06 7 Genes annotated by the GO term GO:0022613. The cellular process by which a complex containing RNA and proteins is synthesized aggregates and bonds together. www.broad.mit.e...
Broad TRANSCRIPTION_DNA_DEPENDENT View Gene Set 6.833e-08 623 7.047e-06 8 Genes annotated by the GO term GO:0006351. The synthesis of RNA on a template of DNA. www.broad.mit.e...
Broad RNA_BIOSYNTHETIC_PROCESS View Gene Set 8.122e-08 625 7.445e-06 9 Genes annotated by the GO term GO:0032774. The chemical reactions and pathways resulting in the formation of RNA ribonucleic acid one of the two main type of nucleic acid consisting of a long unbranched macromolecule formed from ribonucleotides joined in 3' 5'-phosphodiester linkage. Includes polymerization of ribonucleotide monomers. www.broad.mit.e...
Broad TRANSCRIPTION_FROM_RNA_POLYMERASE_II_PROMOTER View Gene Set 1.03e-07 449 8.496e-06 10 Genes annotated by the GO term GO:0006366. The synthesis of RNA from a DNA template by RNA polymerase II (Pol II) originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs). www.broad.mit.e...
Broad REGULATION_OF_TRANSCRIPTION_FROM_RNA_POLYMERASE_II_PROMOTER View Gene Set 3.599e-07 285 2.699e-05 11 Genes annotated by the GO term GO:0006357. Any process that modulates the frequency rate or extent of transcription from an RNA polymerase II promoter. www.broad.mit.e...
Broad PROTEIN_RNA_COMPLEX_ASSEMBLY View Gene Set 4.859e-07 59 3.34e-05 12 Genes annotated by the GO term GO:0022618. The aggregation arrangement and bonding together of proteins and RNA molecules to form a ribonucleoprotein complex. www.broad.mit.e...
Broad MRNA_PROCESSING_GO_0006397 View Gene Set 8.056e-07 59 4.747e-05 13 Genes annotated by the GO term GO:0006397. Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide. www.broad.mit.e...
Broad MRNA_METABOLIC_PROCESS View Gene Set 7.905e-07 70 4.747e-05 13 Genes annotated by the GO term GO:0016071. The chemical reactions and pathways involving mRNA messenger RNA which is responsible for carrying the coded genetic 'message' transcribed from DNA to sites of protein assembly at the ribosomes. www.broad.mit.e...
Broad TRANSCRIPTION View Gene Set 9.66e-07 738 4.981e-05 15 Genes annotated by the GO term GO:0006350. The synthesis of either RNA on a template of DNA or DNA on a template of RNA. www.broad.mit.e...
Broad REGULATION_OF_NUCLEOBASENUCLEOSIDENUCLEOTIDE_AND_NUCLEIC_ACID_METABOLIC_PROCESS View Gene Set 9.592e-07 601 4.981e-05 15 Genes annotated by the GO term GO:0019219. Any process that modulates the frequency rate or extent of the chemical reactions and pathways involving nucleobases nucleosides nucleotides and nucleic acids. www.broad.mit.e...
Broad REGULATION_OF_RNA_METABOLIC_PROCESS View Gene Set 1.032e-06 457 5.01e-05 17 Genes annotated by the GO term GO:0051252. Any process that modulates the frequency rate or extent of the chemical reactions and pathways involving RNA. www.broad.mit.e...
Broad REGULATION_OF_TRANSCRIPTIONDNA_DEPENDENT View Gene Set 1.188e-06 452 5.445e-05 18 Genes annotated by the GO term GO:0006355. Any process that modulates the frequency rate or extent of DNA-dependent transcription. www.broad.mit.e...
Broad REGULATION_OF_CELLULAR_METABOLIC_PROCESS View Gene Set 2.452e-06 767 0.0001065 19 Genes annotated by the GO term GO:0031323. Any process that modulates the frequency rate or extent of the chemical reactions and pathways by which individual cells transform chemical substances. www.broad.mit.e...
Broad REGULATION_OF_GENE_EXPRESSION View Gene Set 3.804e-06 660 0.0001516 20 Genes annotated by the GO term GO:0010468. Any process that modulates the frequency rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form. www.broad.mit.e...
Broad REGULATION_OF_METABOLIC_PROCESS View Gene Set 3.858e-06 779 0.0001516 20 Genes annotated by the GO term GO:0019222. Any process that modulates the frequency rate or extent of the chemical reactions and pathways within a cell or an organism. www.broad.mit.e...
Broad DNA_REPLICATION View Gene Set 4.972e-06 101 0.0001865 22 Genes annotated by the GO term GO:0006260. The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA. www.broad.mit.e...
Broad CELL_CYCLE_PROCESS View Gene Set 1.166e-05 187 0.0004183 23 Genes annotated by the GO term GO:0022402. A cellular process that is involved in the progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. www.broad.mit.e...
Broad DNA_REPAIR View Gene Set 1.239e-05 123 0.0004259 24 Genes annotated by the GO term GO:0006281. The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations chemical mutagens fungal and bacterial toxins etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal base excision repair nucleotide excision repair photoreactivation bypass double-strand break repair pathway and mismatch repair pathway. www.broad.mit.e...
Broad REGULATION_OF_TRANSCRIPTION View Gene Set 1.432e-05 555 0.0004726 25 Genes annotated by the GO term GO:0045449. Any process that modulates the frequency rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA. www.broad.mit.e...
Broad COENZYME_BIOSYNTHETIC_PROCESS View Gene Set 1.509e-05 10 0.0004789 26 Genes annotated by the GO term GO:0009108. The chemical reactions and pathways resulting in the formation of coenzymes any of various nonprotein organic cofactors that are required in addition to an enzyme and a substrate for an enzymatic reaction to proceed. www.broad.mit.e...
Broad RESPONSE_TO_ENDOGENOUS_STIMULUS View Gene Set 2.341e-05 197 0.0007153 27 Genes annotated by the GO term GO:0009719. A change in state or activity of a cell or an organism (in terms of movement secretion enzyme production gene expression etc.) as a result of an endogenous stimulus. www.broad.mit.e...
Broad RESPONSE_TO_DNA_DAMAGE_STIMULUS View Gene Set 3.285e-05 159 0.000968 28 Genes annotated by the GO term GO:0006974. A change in state or activity of a cell or an organism (in terms of movement secretion enzyme production gene expression etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism. www.broad.mit.e...
Broad MITOTIC_CELL_CYCLE View Gene Set 5.014e-05 148 0.001379 29 Genes annotated by the GO term GO:0000278. Progression through the phases of the mitotic cell cycle the most common eukaryotic cell cycle which canonically comprises four successive phases called G1 S G2 and M and includes replication of the genome and the subsequent segregation of chromosomes into daughter cells. In some variant cell cycles nuclear replication or nuclear division may not be followed by cell division or G1 and G2 phases may be absent. www.broad.mit.e...
Broad CHROMOSOME_ORGANIZATION_AND_BIOGENESIS View Gene Set 4.892e-05 117 0.001379 29 Genes annotated by the GO term GO:0051276. A process that is carried out at the cellular level that results in the formation arrangement of constituent parts or disassembly of chromosomes structures composed of a very long molecule of DNA and associated proteins that carries hereditary information. www.broad.mit.e...
Broad CELL_CYCLE_GO_0007049 View Gene Set 5.524e-05 304 0.00147 31 Genes annotated by the GO term GO:0007049. The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division. www.broad.mit.e...
Broad PROTEIN_FOLDING View Gene Set 0.0001019 56 0.002627 32 Genes annotated by the GO term GO:0006457. The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure. www.broad.mit.e...
Broad M_PHASE View Gene Set 0.0001152 111 0.002881 33 Genes annotated by the GO term GO:0000279. Progression through M phase the part of the cell cycle comprising nuclear division. www.broad.mit.e...
Broad SPLICEOSOME_ASSEMBLY View Gene Set 0.0001206 13 0.002926 34 Genes annotated by the GO term GO:0000245. The aggregation arrangement and bonding together of the spliceosome a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions. www.broad.mit.e...
Broad NEGATIVE_REGULATION_OF_NUCLEOBASENUCLEOSIDENUCLEOTIDE_AND_NUCLEIC_ACID_METABOLIC_PROCESS View Gene Set 0.0001521 205 0.003585 35 Genes annotated by the GO term GO:0045934. Any process that stops prevents or reduces the frequency rate or extent of the chemical reactions and pathways involving nucleobases nucleosides nucleotides and nucleic acids. www.broad.mit.e...
Broad M_PHASE_OF_MITOTIC_CELL_CYCLE View Gene Set 0.0001645 83 0.003771 36 Genes annotated by the GO term GO:0000087. Progression through M phase the part of the mitotic cell cycle during which mitosis takes place. www.broad.mit.e...
Broad CELL_CYCLE_PHASE View Gene Set 0.0001978 167 0.00441 37 Genes annotated by the GO term GO:0022403. A cell cycle process comprising the steps by which a cell progresses through one of the biochemical and morphological phases and events that occur during successive cell replication or nuclear replication events. www.broad.mit.e...
Broad DNA_DEPENDENT_DNA_REPLICATION View Gene Set 0.0002156 55 0.00468 38 Genes annotated by the GO term GO:0006261. The process whereby new strands of DNA are synthesized using parental DNA as a template for the DNA-dependent DNA polymerases that synthesize the new strands. www.broad.mit.e...
Broad TRANSLATIONAL_INITIATION View Gene Set 0.0003486 39 0.007268 39 Genes annotated by the GO term GO:0006413. The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome mRNA and an initiation complex that contains the first aminoacyl-tRNA. www.broad.mit.e...
Broad MITOSIS View Gene Set 0.0003524 81 0.007268 39 Genes annotated by the GO term GO:0007067. Progression through mitosis the division of the eukaryotic cell nucleus to produce two daughter nuclei that usually contain the identical chromosome complement to their mother. www.broad.mit.e...
Broad NEGATIVE_REGULATION_OF_TRANSCRIPTION View Gene Set 0.00051 185 0.01026 41 Genes annotated by the GO term GO:0016481. Any process that stops prevents or reduces the frequency rate or extent of transcription. www.broad.mit.e...
Broad NEGATIVE_REGULATION_OF_CELLULAR_METABOLIC_PROCESS View Gene Set 0.0005938 252 0.01166 42 Genes annotated by the GO term GO:0031324. Any process that stops prevents or reduces the frequency rate or extent of the chemical reactions and pathways by which individual cells transform chemical substances. www.broad.mit.e...
Broad CELLULAR_PROTEIN_CATABOLIC_PROCESS View Gene Set 0.0006258 58 0.01173 43 Genes annotated by the GO term GO:0044257. The chemical reactions and pathways resulting in the breakdown of a protein by individual cells. www.broad.mit.e...
Broad COFACTOR_BIOSYNTHETIC_PROCESS View Gene Set 0.0006227 21 0.01173 43 Genes annotated by the GO term GO:0051188. The chemical reactions and pathways resulting in the formation of a cofactor a substance that is required for the activity of an enzyme or other protein. www.broad.mit.e...
Broad BIOPOLYMER_CATABOLIC_PROCESS View Gene Set 0.0007902 115 0.01417 45 Genes annotated by the GO term GO:0043285. The chemical reactions and pathways resulting in the breakdown of biopolymers long repeating chains of monomers found in nature e.g. polysaccharides and proteins. www.broad.mit.e...
Broad TRANSCRIPTION_INITIATION_FROM_RNA_POLYMERASE_II_PROMOTER View Gene Set 0.0007797 29 0.01417 45 Genes annotated by the GO term GO:0006367. Processes involved in starting transcription from the RNA polymerase II promoter. www.broad.mit.e...
Broad NEGATIVE_REGULATION_OF_METABOLIC_PROCESS View Gene Set 0.0008485 255 0.01489 47 Genes annotated by the GO term GO:0009892. Any process that stops prevents or reduces the frequency rate or extent of the chemical reactions and pathways within a cell or an organism. www.broad.mit.e...
Broad PROTEIN_CATABOLIC_PROCESS View Gene Set 0.0009793 68 0.01683 48 Genes annotated by the GO term GO:0030163. The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native active configuration with or without the hydrolysis of peptide bonds. www.broad.mit.e...
Broad PROTEIN_DNA_COMPLEX_ASSEMBLY View Gene Set 0.001048 48 0.01765 49 Genes annotated by the GO term GO:0065004. The aggregation arrangement and bonding together of proteins and DNA molecules to form a protein-DNA complex. www.broad.mit.e...
Broad COFACTOR_METABOLIC_PROCESS View Gene Set 0.001127 53 0.01833 50 Genes annotated by the GO term GO:0051186. The chemical reactions and pathways involving a cofactor a substance that is required for the activity of an enzyme or other protein. Cofactors may be inorganic such as the metal atoms zinc iron and copper in certain forms or organic in which case they are referred to as coenzymes. Cofactors may either be bound tightly to active sites or bind loosely with the substrate. www.broad.mit.e...
Broad SPINDLE_ORGANIZATION_AND_BIOGENESIS View Gene Set 0.001133 10 0.01833 50 Genes annotated by the GO term GO:0007051. A process that is carried out at the cellular level which results in the formation arrangement of constituent parts or disassembly of the spindle the array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during DNA segregation and serves to move the duplicated chromosomes apart. www.broad.mit.e...
Broad VIRAL_GENOME_REPLICATION View Gene Set 0.001242 21 0.0197 52 Genes annotated by the GO term GO:0019079. Any process involved directly in viral genome replication including viral nucleotide metabolism. www.broad.mit.e...
Broad NEGATIVE_REGULATION_OF_TRANSCRIPTION_DNA_DEPENDENT View Gene Set 0.001377 127 0.02021 53 Genes annotated by the GO term GO:0045892. Any process that stops prevents or reduces the frequency rate or extent of DNA-dependent transcription. www.broad.mit.e...
Broad TRANSCRIPTION_INITIATION View Gene Set 0.001387 35 0.02021 53 Genes annotated by the GO term GO:0006352. Processes involved in the assembly of the RNA polymerase complex at the promoter region of a DNA template resulting in the subsequent synthesis of RNA from that promoter. www.broad.mit.e...
Broad TRNA_METABOLIC_PROCESS View Gene Set 0.001361 18 0.02021 53 Genes annotated by the GO term GO:0006399. The chemical reactions and pathways involving tRNA transfer RNA a class of relatively small RNA molecules responsible for mediating the insertion of amino acids into the sequence of nascent polypeptide chains during protein synthesis. Transfer RNA is characterized by the presence of many unusual minor bases the function of which has not been completely established. www.broad.mit.e...
Broad MRNA_SPLICE_SITE_SELECTION View Gene Set 0.001396 6 0.02021 53 Genes annotated by the GO term GO:0006376. Selection of a splice site by components of the assembling spliceosome. www.broad.mit.e...
Broad NEGATIVE_REGULATION_OF_RNA_METABOLIC_PROCESS View Gene Set 0.001377 127 0.02021 53 Genes annotated by the GO term GO:0051253. Any process that stops prevents or reduces the frequency rate or extent of the chemical reactions and pathways involving RNA. www.broad.mit.e...
Broad MITOTIC_SPINDLE_ORGANIZATION_AND_BIOGENESIS View Gene Set 0.001433 9 0.02038 58 Genes annotated by the GO term GO:0007052. A process that is carried out at the cellular level which results in the formation arrangement of constituent parts or disassembly of the microtubule spindle during a mitotic cell cycle. www.broad.mit.e...
Broad ANDROGEN_RECEPTOR_SIGNALING_PATHWAY View Gene Set 0.001474 12 0.02061 59 Genes annotated by the GO term GO:0030521. Any series of molecular signals generated as a consequence of an androgen binding to its receptor. www.broad.mit.e...
Broad COENZYME_METABOLIC_PROCESS View Gene Set 0.001573 37 0.0214 60 Genes annotated by the GO term GO:0006732. The chemical reactions and pathways involving coenzymes any of various nonprotein organic cofactors that are required in addition to an enzyme and a substrate for an enzymatic reaction to proceed. www.broad.mit.e...
Broad ESTABLISHMENT_AND_OR_MAINTENANCE_OF_CHROMATIN_ARCHITECTURE View Gene Set 0.001582 72 0.0214 60 Genes annotated by the GO term GO:0006325. The specification formation and maintenance of the physical structure of eukaryotic chromatin. www.broad.mit.e...
Broad REGULATION_OF_GENE_EXPRESSION_EPIGENETIC View Gene Set 0.001769 30 0.02353 62 Genes annotated by the GO term GO:0040029. Any process that modulates the frequency rate or extent of gene expression; the process is mitotically or meiotically heritable or is stably self-propagated in the cytoplasm of a resting cell and does not entail a change in DNA sequence. www.broad.mit.e...
Broad REGULATION_OF_VIRAL_REPRODUCTION View Gene Set 0.001811 12 0.02372 63 Genes annotated by the GO term GO:0050792. Any process that modulates the rate or extent of the viral life cycle the set of processes by which a virus reproduces and spreads among hosts. www.broad.mit.e...
Broad RNA_SPLICINGVIA_TRANSESTERIFICATION_REACTIONS View Gene Set 0.002016 27 0.02598 64 Genes annotated by the GO term GO:0000375. Splicing of RNA via a series of two transesterification reactions. www.broad.mit.e...
Broad REGULATION_OF_TRANSLATIONAL_INITIATION View Gene Set 0.002491 31 0.03162 65 Genes annotated by the GO term GO:0006446. Any process that modulates the frequency rate or extent of translational initiation. www.broad.mit.e...
Broad NEGATIVE_REGULATION_OF_TRANSCRIPTION_FROM_RNA_POLYMERASE_II_PROMOTER View Gene Set 0.002979 83 0.03724 66 Genes annotated by the GO term GO:0000122. Any process that stops prevents or reduces the frequency rate or extent of transcription from an RNA polymerase II promoter. www.broad.mit.e...
Broad MACROMOLECULE_CATABOLIC_PROCESS View Gene Set 0.003813 135 0.04695 67 Genes annotated by the GO term GO:0009057. The chemical reactions and pathways resulting in the breakdown of a macromolecule any large molecule including proteins nucleic acids and carbohydrates. www.broad.mit.e...

Gene Set Collection: Broad.c5.CC

Arguments: refPop=all, featureType=featureNames, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad NUCLEUS View Gene Set 2.848e-26 1353 6.637e-24 1 Genes annotated by the GO term GO:0005634. A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells the nucleus contains all of the cell's chromosomes except the organellar chromosomes and is the site of RNA synthesis and processing. In some species or in specialized cell types RNA metabolism or DNA replication may be absent. www.broad.mit.e...
Broad NUCLEAR_PART View Gene Set 1.341e-23 543 1.562e-21 2 Genes annotated by the GO term GO:0044428. Any constituent part of the nucleus a membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. www.broad.mit.e...
Broad INTRACELLULAR_ORGANELLE_PART View Gene Set 3.259e-19 1144 2.531e-17 3 Genes annotated by the GO term GO:0044446. A constituent part of an intracellular organelle an organized structure of distinctive morphology and function occurring within the cell. Includes constituent parts of the nucleus mitochondria plastids vacuoles vesicles ribosomes and the cytoskeleton but excludes the plasma membrane. www.broad.mit.e...
Broad ORGANELLE_PART View Gene Set 5.271e-19 1149 3.07e-17 4 Genes annotated by the GO term GO:0044422. Any constituent part of an organelle an organized structure of distinctive morphology and function. Includes constituent parts of the nucleus mitochondria plastids vacuoles vesicles ribosomes and the cytoskeleton but excludes the plasma membrane. www.broad.mit.e...
Broad ORGANELLE_LUMEN View Gene Set 1.341e-15 434 5.207e-14 5 Genes annotated by the GO term GO:0043233. The volume enclosed by the membranes of a particular organelle e.g. endoplasmic reticulum lumen or the space between the two lipid bilayers of a double membrane surrounding an organelle e.g. nuclear membrane lumen. www.broad.mit.e...
Broad MEMBRANE_ENCLOSED_LUMEN View Gene Set 1.341e-15 434 5.207e-14 5 Genes annotated by the GO term GO:0031974. The enclosed volume within a sealed membrane or between two sealed membranes. www.broad.mit.e...
Broad NUCLEAR_LUMEN View Gene Set 2.24e-14 365 7.457e-13 7 Genes annotated by the GO term GO:0031981. The volume enclosed by the nuclear inner membrane. www.broad.mit.e...
Broad NUCLEOPLASM View Gene Set 2.497e-13 266 7.272e-12 8 Genes annotated by the GO term GO:0005654. That part of the nuclear content other than the chromosomes or the nucleolus. www.broad.mit.e...
Broad CHROMOSOME View Gene Set 4.345e-11 122 1.125e-09 9 Genes annotated by the GO term GO:0005694. A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information. www.broad.mit.e...
Broad RIBONUCLEOPROTEIN_COMPLEX View Gene Set 4.993e-10 129 1.163e-08 10 Genes annotated by the GO term GO:0030529. A macromolecular complex containing both protein and RNA molecules. www.broad.mit.e...
Broad MACROMOLECULAR_COMPLEX View Gene Set 1.601e-09 914 3.392e-08 11 Genes annotated by the GO term GO:0032991. A stable assembly of two or more macromolecules i.e. proteins nucleic acids carbohydrates or lipids in which the constituent parts function together. www.broad.mit.e...
Broad NUCLEOPLASM_PART View Gene Set 6.215e-09 202 1.207e-07 12 Genes annotated by the GO term GO:0044451. Any constituent part of the nucleoplasm that part of the nuclear content other than the chromosomes or the nucleolus. www.broad.mit.e...
Broad SPLICEOSOME View Gene Set 3.596e-08 44 6.446e-07 13 Genes annotated by the GO term GO:0005681. A ribonucleoprotein complex containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron. www.broad.mit.e...
Broad MITOCHONDRION View Gene Set 4.322e-08 335 6.714e-07 14 Genes annotated by the GO term GO:0005739. A semiautonomous self replicating organelle that occurs in varying numbers shapes and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration. www.broad.mit.e...
Broad CHROMOSOMAL_PART View Gene Set 4.244e-08 95 6.714e-07 14 Genes annotated by the GO term GO:0044427. Any constituent part of a chromosome a structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information. www.broad.mit.e...
Broad DNA_DIRECTED_RNA_POLYMERASEII_HOLOENZYME View Gene Set 1.346e-06 65 1.959e-05 16 Genes annotated by the GO term GO:0016591. Large protein complex composed of the RNA polymerase core complex and a variety of other proteins including transcription factor complexes TFIIA D E F and H which are required for promoter recognition and the Mediator subcomplex. Catalyzes the synthesis of eukaryotic pre-mRNA. www.broad.mit.e...
Broad ENVELOPE View Gene Set 2.391e-06 165 3.095e-05 17 Genes annotated by the GO term GO:0031975. A multilayered structure surrounding all or part of a cell; encompasses one or more lipid bilayers and may include a cell wall layer also includes the space between layers. www.broad.mit.e...
Broad ORGANELLE_ENVELOPE View Gene Set 2.391e-06 165 3.095e-05 17 Genes annotated by the GO term GO:0031967. A double membrane structure enclosing an organelle including two lipid bilayers and the region between them. In some cases an organelle envelope may have more than two membranes. www.broad.mit.e...
Broad UBIQUITIN_LIGASE_COMPLEX View Gene Set 5.162e-06 26 6.331e-05 19 Genes annotated by the GO term GO:0000151. A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex. www.broad.mit.e...
Broad PROTEIN_COMPLEX View Gene Set 1.107e-05 799 0.000129 20 Genes annotated by the GO term GO:0043234. Any protein group composed of two or more subunits which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups such as nucleic acids metal ions or carbohydrate groups. www.broad.mit.e...
Broad CHROMOSOMEPERICENTRIC_REGION View Gene Set 1.281e-05 31 0.0001421 21 Genes annotated by the GO term GO:0000775. The central region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes this region corresponds to a single area of the chromosome whereas in holocentric chromosomes it is evenly distributed along the chromosome. www.broad.mit.e...
Broad SPINDLE View Gene Set 2.943e-05 37 0.0003117 22 Genes annotated by the GO term GO:0005819. The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart. www.broad.mit.e...
Broad NUCLEAR_ENVELOPE View Gene Set 3.647e-05 71 0.0003694 23 Genes annotated by the GO term GO:0005635. The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space a gap of width 20-40 nm (also called the perinuclear space). www.broad.mit.e...
Broad NUCLEOLUS View Gene Set 7.997e-05 116 0.0007763 24 Genes annotated by the GO term GO:0005730. A small dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein is not bounded by a limiting membrane and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA the processing of this RNA into 5.8S 18S and 28S components of ribosomal RNA and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome. www.broad.mit.e...
Broad MITOCHONDRIAL_PART View Gene Set 9.009e-05 140 0.0008396 25 Genes annotated by the GO term GO:0044429. Any constituent part of a mitochondrion a semiautonomous self replicating organelle that occurs in varying numbers shapes and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration. www.broad.mit.e...
Broad NUCLEAR_PORE View Gene Set 0.0001513 29 0.001356 26 Genes annotated by the GO term GO:0005643. Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell where the inner and outer nuclear membranes are joined. www.broad.mit.e...
Broad ORGANELLE_MEMBRANE View Gene Set 0.0001969 290 0.001699 27 Genes annotated by the GO term GO:0031090. The lipid bilayer surrounding an organelle. www.broad.mit.e...
Broad CONDENSED_CHROMOSOME View Gene Set 0.0002129 32 0.001772 28 Genes annotated by the GO term GO:0000793. A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure. www.broad.mit.e...
Broad NUCLEAR_CHROMOSOME View Gene Set 0.0002289 53 0.001839 29 Genes annotated by the GO term GO:0000228. A chromosome found in the nucleus of a eukaryotic cell. www.broad.mit.e...
Broad PROTEASOME_COMPLEX View Gene Set 0.000309 23 0.0024 30 Genes annotated by the GO term GO:0000502. A large multisubunit complex which catalyzes protein degradation. This complex consists of the barrel shaped proteasome core complex and one or two associated proteins or complexes that act in regulating entry into or exit from the core. www.broad.mit.e...
Broad SPINDLE_MICROTUBULE View Gene Set 0.0003196 15 0.002402 31 Genes annotated by the GO term GO:0005876. Any microtubule that is part of a mitotic or meiotic spindle; anchored at one spindle pole. www.broad.mit.e...
Broad ORGANELLE_INNER_MEMBRANE View Gene Set 0.000379 74 0.00276 32 Genes annotated by the GO term GO:0019866. The inner i.e. lumen-facing lipid bilayer of an organelle envelope; usually highly selective to most ions and metabolites. www.broad.mit.e...
Broad SMALL_NUCLEAR_RIBONUCLEOPROTEIN_COMPLEX View Gene Set 0.0006464 20 0.004564 33 Genes annotated by the GO term GO:0030532. A complex composed of RNA of the small nuclear RNA (snRNA) class and protein found in the nucleus of a eukaryotic cell. These are typically named after the snRNA(s) they contain e.g. U1 snRNP or U4/U6 snRNP. Many but not all of these complexes are involved in splicing of nuclear mRNAs. www.broad.mit.e...
Broad TRANSCRIPTION_FACTOR_COMPLEX View Gene Set 0.0006716 84 0.004602 34 Genes annotated by the GO term GO:0005667. Any complex distinct from RNA polymerase including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences and regulating transcription. www.broad.mit.e...
Broad ENDOMEMBRANE_SYSTEM View Gene Set 0.0007109 213 0.004733 35 Genes annotated by the GO term GO:0012505. A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum Golgi bodies vesicles cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles. www.broad.mit.e...
Broad MITOCHONDRIAL_INNER_MEMBRANE View Gene Set 0.0008059 66 0.005184 36 Genes annotated by the GO term GO:0005743. The inner i.e. lumen-facing lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae. www.broad.mit.e...
Broad KINETOCHORE View Gene Set 0.0008232 25 0.005184 36 Genes annotated by the GO term GO:0000776. A multisubunit complex that is located at the pericentric region of DNA and provides an attachment point for the spindle microtubules. www.broad.mit.e...
Broad NUCLEAR_MEMBRANE View Gene Set 0.0009112 48 0.005587 38 Genes annotated by the GO term GO:0031965. Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space. www.broad.mit.e...
Broad CHROMATIN View Gene Set 0.0009759 35 0.00583 39 Genes annotated by the GO term GO:0000785. The ordered and organized complex of DNA and protein that forms the chromosome. www.broad.mit.e...
Broad NUCLEAR_UBIQUITIN_LIGASE_COMPLEX View Gene Set 0.001013 11 0.005898 40 Genes annotated by the GO term GO:0000152. A ubiquitin ligase complex found in the nucleus. www.broad.mit.e...
Broad NUCLEAR_BODY View Gene Set 0.001151 31 0.00654 41 Genes annotated by the GO term GO:0016604. Extra-nucleolar nuclear domains usually visualized by confocal microscopy and fluorescent antibodies to specific proteins. www.broad.mit.e...
Broad MICROTUBULE_ORGANIZING_CENTER View Gene Set 0.00124 64 0.00688 42 Genes annotated by the GO term GO:0005815. A region in a eukaryotic cell such as a centrosome or basal body from which microtubules grow. www.broad.mit.e...
Broad MITOCHONDRIAL_MATRIX View Gene Set 0.001403 46 0.00743 43 Genes annotated by the GO term GO:0005759. The gel-like material with considerable fine structure that lies in the matrix space or lumen of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and in some organisms the enzymes concerned with fatty-acid oxidation. www.broad.mit.e...
Broad MITOCHONDRIAL_LUMEN View Gene Set 0.001403 46 0.00743 43 Genes annotated by the GO term GO:0031980. The volume enclosed by the mitochondrial inner membrane. www.broad.mit.e...
Broad CENTROSOME View Gene Set 0.001449 55 0.007502 45 Genes annotated by the GO term GO:0005813. A structure comprised of a core structure (in most organisms a pair of centrioles) and peripheral material from which a microtubule-based structure such as a spindle apparatus is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells though in animal cells it changes continually during the cell-division cycle. www.broad.mit.e...
Broad PORE_COMPLEX View Gene Set 0.001603 34 0.008119 46 Genes annotated by the GO term GO:0046930. Any small opening in a membrane that allows the passage of gases and/or liquids. www.broad.mit.e...
Broad NUCLEOLAR_PART View Gene Set 0.001803 16 0.008939 47 Genes annotated by the GO term GO:0044452. Any constituent part of a nucleolus a small dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein is not bounded by a limiting membrane and is not seen during mitosis. www.broad.mit.e...
Broad MITOCHONDRIAL_MEMBRANE_PART View Gene Set 0.001993 52 0.009676 48 Genes annotated by the GO term GO:0044455. Any constituent part of the mitochondrial membrane either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope. www.broad.mit.e...
Broad REPLICATION_FORK View Gene Set 0.002064 18 0.009813 49 Genes annotated by the GO term GO:0005657. The Y-shaped region of a replicating DNA molecule resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes. www.broad.mit.e...
Broad NUCLEAR_MEMBRANE_PART View Gene Set 0.002177 40 0.01014 50 Genes annotated by the GO term GO:0044453. Any constituent part of the nuclear membrane the envelope that surrounds the nucleus of eukaryotic cells. www.broad.mit.e...
Broad MITOCHONDRIAL_MEMBRANE View Gene Set 0.002672 85 0.01221 51 Genes annotated by the GO term GO:0031966. Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope. www.broad.mit.e...
Broad NON_MEMBRANE_BOUND_ORGANELLE View Gene Set 0.003802 613 0.01671 52 Genes annotated by the GO term GO:0043228. Organized structure of distinctive morphology and function not bounded by a lipid bilayer membrane. Includes ribosomes the cytoskeleton and chromosomes. www.broad.mit.e...
Broad INTRACELLULAR_NON_MEMBRANE_BOUND_ORGANELLE View Gene Set 0.003802 613 0.01671 52 Genes annotated by the GO term GO:0043232. Organized structure of distinctive morphology and function not bounded by a lipid bilayer membrane and occurring within the cell. Includes ribosomes the cytoskeleton and chromosomes. www.broad.mit.e...
Broad TRANSCRIPTION_FACTOR_TFIID_COMPLEX View Gene Set 0.005228 14 0.02256 54 Genes annotated by the GO term GO:0005669. A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II) TFIID is believed to recognize at least two distinct elements the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters. www.broad.mit.e...
Broad MITOCHONDRIAL_ENVELOPE View Gene Set 0.005381 95 0.0228 55 Genes annotated by the GO term GO:0005740. The double lipid bilayer enclosing the mitochondrion and separating its contents from the cell cytoplasm; includes the intermembrane space. www.broad.mit.e...
Broad ORGANELLAR_SMALL_RIBOSOMAL_SUBUNIT View Gene Set 0.005895 11 0.02338 56 Genes annotated by the GO term GO:0000314. The smaller of the two subunits of an organellar ribosome. www.broad.mit.e...
Broad MITOCHONDRIAL_SMALL_RIBOSOMAL_SUBUNIT View Gene Set 0.005895 11 0.02338 56 Genes annotated by the GO term GO:0005763. The smaller of the two subunits of a mitochondrial ribosome. www.broad.mit.e...
Broad EUKARYOTIC_TRANSLATION_INITIATION_FACTOR_3_COMPLEX View Gene Set 0.005921 10 0.02338 56 Genes annotated by the GO term GO:0005852. A complex of several polypeptides that plays at least two important roles in protein synthesis: First eIF3 binds to the 40S ribosome and facilitates loading of the Met-tRNA/eIF2.GTP ternary complex to form the 43S preinitiation complex. Subsequently eIF3 apparently assists eIF4 in recruiting mRNAs to the 43S complex. www.broad.mit.e...
Broad SMALL_RIBOSOMAL_SUBUNIT View Gene Set 0.005895 11 0.02338 56 Genes annotated by the GO term GO:0015935. The smaller of the two subunits of a ribosome. www.broad.mit.e...
Broad CYTOPLASM View Gene Set 0.008637 2054 0.03354 60 Genes annotated by the GO term GO:0005737. All of the contents of a cell excluding the plasma membrane and nucleus but including other subcellular structures. www.broad.mit.e...
Broad CYTOPLASMIC_PART View Gene Set 0.01088 1350 0.04155 61 Genes annotated by the GO term GO:0044444. Any constituent part of the cytoplasm all of the contents of a cell excluding the plasma membrane and nucleus but including other subcellular structures. www.broad.mit.e...
Broad DNA_DIRECTED_RNA_POLYMERASE_COMPLEX View Gene Set 0.01233 16 0.04488 62 Genes annotated by the GO term GO:0000428. A protein complex that possesses DNA-directed RNA polymerase activity. www.broad.mit.e...
Broad RNA_POLYMERASE_COMPLEX View Gene Set 0.01233 16 0.04488 62 Genes annotated by the GO term GO:0030880. Any complex that possesses RNA polymerase activity; generally comprises a catalytic subunit and one or more additional subunits. www.broad.mit.e...
Broad NUCLEAR_DNA_DIRECTED_RNA_POLYMERASE_COMPLEX View Gene Set 0.01233 16 0.04488 62 Genes annotated by the GO term GO:0055029. A protein complex located in the nucleus that possesses DNA-directed RNA polymerase activity. www.broad.mit.e...

Gene Set Collection: Broad.c5.MF

Arguments: refPop=all, featureType=featureNames, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad RNA_BINDING View Gene Set 1.213e-08 236 4.804e-06 1 Genes annotated by the GO term GO:0003723. Interacting selectively with an RNA molecule or a portion thereof. www.broad.mit.e...
Broad RNA_SPLICING_FACTOR_ACTIVITYTRANSESTERIFICATION_MECHANISM View Gene Set 2.869e-06 14 0.000568 2 Genes annotated by the GO term GO:0031202. An activity which binds RNA and functions to assist splicing of substrate RNA(s) by facilitating the formation and stabilization of a catalytic conformation in which the splice junctions of the RNA(s) to be spliced are positioned for a transesterification reaction that occurs between two sites within the RNA(s) to be spliced. www.broad.mit.e...
Broad TRANSCRIPTION_FACTOR_BINDING View Gene Set 9.006e-06 300 0.001189 3 Genes annotated by the GO term GO:0008134. Interacting selectively with a transcription factor any protein required to initiate or regulate transcription. www.broad.mit.e...
Broad TRANSCRIPTION_COFACTOR_ACTIVITY View Gene Set 3.887e-05 222 0.003848 4 Genes annotated by the GO term GO:0003712. The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself. www.broad.mit.e...
Broad LIGASE_ACTIVITY View Gene Set 8.211e-05 97 0.006503 5 Genes annotated by the GO term GO:0016874. Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6. www.broad.mit.e...
Broad STRUCTURE_SPECIFIC_DNA_BINDING View Gene Set 0.000104 55 0.006864 6 Genes annotated by the GO term GO:0043566. Interacting selectively with DNA of a specific structure or configuration e.g. triplex DNA binding or bent DNA binding. www.broad.mit.e...
Broad GENERAL_RNA_POLYMERASE_II_TRANSCRIPTION_FACTOR_ACTIVITY View Gene Set 0.0001383 32 0.007826 7 Genes annotated by the GO term GO:0016251. Any function that supports basal (unregulated) transcription of genes by core RNA polymerase II. Five general transcription factors are necessary and sufficient for such basal transcription in yeast: TFIIB TFIID TFIIE TFIIF TFIIH and TATA-binding protein (TBF). www.broad.mit.e...
Broad LIGASE_ACTIVITY_FORMING_CARBON_NITROGEN_BONDS View Gene Set 0.0002358 68 0.01167 8 Genes annotated by the GO term GO:0016879. Catalysis of the ligation of two substances via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage usually in a nucleoside triphosphate. www.broad.mit.e...
Broad RNA_POLYMERASE_II_TRANSCRIPTION_FACTOR_ACTIVITY View Gene Set 0.0003756 182 0.01633 9 Genes annotated by the GO term GO:0003702. Functions to initiate or regulate RNA polymerase II transcription. www.broad.mit.e...
Broad DOUBLE_STRANDED_DNA_BINDING View Gene Set 0.0004123 32 0.01633 9 Genes annotated by the GO term GO:0003690. Interacting selectively with double-stranded DNA. www.broad.mit.e...
Broad TRANSLATION_REGULATOR_ACTIVITY View Gene Set 0.0006007 41 0.02163 11 Genes annotated by the GO term GO:0045182. Any substance involved in the initiation activation perpetuation repression or termination of polypeptide synthesis at the ribosome. www.broad.mit.e...
Broad TRANSLATION_FACTOR_ACTIVITY_NUCLEIC_ACID_BINDING View Gene Set 0.001029 39 0.02716 12 Genes annotated by the GO term GO:0008135. Functions during translation by binding nucleic acids during polypeptide synthesis at the ribosome. www.broad.mit.e...
Broad CHROMATIN_BINDING View Gene Set 0.000925 32 0.02716 12 Genes annotated by the GO term GO:0003682. Interacting selectively with chromatin the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase. www.broad.mit.e...
Broad THYROID_HORMONE_RECEPTOR_BINDING View Gene Set 0.0009616 17 0.02716 12 Genes annotated by the GO term GO:0046966. Interacting selectively with a thyroid hormone receptor. www.broad.mit.e...
Broad DNA_BINDING View Gene Set 0.0009958 587 0.02716 12 Genes annotated by the GO term GO:0003677. Interacting selectively with DNA (deoxyribonucleic acid). www.broad.mit.e...
Broad TRANSCRIPTION_COACTIVATOR_ACTIVITY View Gene Set 0.001441 121 0.03567 16 Genes annotated by the GO term GO:0003713. The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself. www.broad.mit.e...
Broad TRANSCRIPTION_ACTIVATOR_ACTIVITY View Gene Set 0.001601 169 0.03729 17 Genes annotated by the GO term GO:0016563. Any transcription regulator activity required for initiation or upregulation of transcription. www.broad.mit.e...

Gene Set Collection: PMID

Arguments: refPop=all, featureType=featureNames, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
PMID 15302935 View Gene Set 4.258e-20 773 1.067e-16 1 Large-scale characterization of HeLa cell nuclear phosphoproteins. www.ncbi.nlm.ni...
PMID 15635413 View Gene Set 1.089e-18 421 1.365e-15 2 Nucleolar proteome dynamics. www.ncbi.nlm.ni...
PMID 17643375 View Gene Set 1.581e-17 391 1.321e-14 3 Systematic analysis of the protein interaction network for the human transcription machinery reveals the identity of the 7SK capping enzyme. www.ncbi.nlm.ni...
PMID 10810093 View Gene Set 1.067e-14 151 6.175e-12 4 Identification of novel human genes evolutionarily conserved in Caenorhabditis elegans by comparative proteomics. www.ncbi.nlm.ni...
PMID 16964243 View Gene Set 1.231e-14 504 6.175e-12 4 A probability-based approach for high-throughput protein phosphorylation analysis and site localization. www.ncbi.nlm.ni...
PMID 11790298 View Gene Set 1.697e-13 208 7.093e-11 6 Directed proteomic analysis of the human nucleolus. www.ncbi.nlm.ni...
PMID 12429849 View Gene Set 4.706e-12 106 1.685e-09 7 Functional proteomic analysis of human nucleolus. www.ncbi.nlm.ni...
PMID 16565220 View Gene Set 1.955e-11 210 6.125e-09 8 Phosphoproteome analysis of the human mitotic spindle. www.ncbi.nlm.ni...
PMID 11991638 View Gene Set 3.937e-10 74 1.097e-07 9 Purification and characterization of native spliceosomes suitable for three-dimensional structural analysis. www.ncbi.nlm.ni...
PMID 12226669 View Gene Set 3.056e-09 108 7.662e-07 10 Comprehensive proteomic analysis of the human spliceosome. www.ncbi.nlm.ni...
PMID 11042152 View Gene Set 4.083e-09 315 9.305e-07 11 Cloning and functional analysis of cDNAs with open reading frames for 300 previously undefined genes expressed in CD34+ hematopoietic stem/progenitor cells. www.ncbi.nlm.ni...
PMID 12234937 View Gene Set 6.744e-08 34 1.409e-05 12 Characterization of novel SF3b and 17S U2 snRNP proteins including a human Prp5p homologue and an SF3b DEAD-box protein. www.ncbi.nlm.ni...
PMID 12791985 View Gene Set 1.318e-07 37 2.541e-05 13 Sensing DNA damage through ATRIP recognition of RPA-ssDNA complexes. www.ncbi.nlm.ni...
PMID 12614612 View Gene Set 3.373e-07 19 6.04e-05 14 Interaction and assembly of murine pre-replicative complex proteins in yeast and mouse cells. www.ncbi.nlm.ni...
PMID 11285280 View Gene Set 4.139e-07 62 6.917e-05 15 Anaphase-promoting complex/cyclosome-dependent proteolysis of human cyclin A starts at the beginning of mitosis and is not subject to the spindle assembly checkpoint. www.ncbi.nlm.ni...
PMID 15707391 View Gene Set 8.984e-07 23 0.0001408 16 DNA-dependent phosphorylation of Chk1 and Claspin in a human cell-free system. www.ncbi.nlm.ni...
PMID 20522537 View Gene Set 2.194e-06 73 0.0003235 17 Variation within DNA repair pathway genes and risk of multiple sclerosis. www.ncbi.nlm.ni...
PMID 9731529 View Gene Set 2.822e-06 24 0.000393 18 Mass spectrometry and EST-database searching allows characterization of the multi-protein spliceosome complex. www.ncbi.nlm.ni...
PMID 18950845 View Gene Set 6.246e-06 88 0.0008241 19 Evaluating new candidate SNPs as low penetrance risk factors in sporadic breast cancer: a two-stage Spanish case-control study. www.ncbi.nlm.ni...
PMID 12706105 View Gene Set 7.645e-06 182 0.0009582 20 Identification and characterization of over 100 mitochondrial ribosomal protein pseudogenes in the human genome. www.ncbi.nlm.ni...
PMID 11279123 View Gene Set 8.488e-06 31 0.0009751 21 The small subunit of the mammalian mitochondrial ribosome. Identification of the full complement of ribosomal proteins present. www.ncbi.nlm.ni...
PMID 8590280 View Gene Set 8.557e-06 41 0.0009751 21 Prediction of the coding sequences of unidentified human genes. IV. The coding sequences of 40 new genes (KIAA0121-KIAA0160) deduced by analysis of cDNA clones from human cell line KG-1. www.ncbi.nlm.ni...
PMID 15226314 View Gene Set 9.228e-06 20 0.001006 23 Human claspin is a ring-shaped DNA-binding protein with high affinity to branched DNA structures. www.ncbi.nlm.ni...
PMID 15231747 View Gene Set 9.759e-06 212 0.001019 24 A protein interaction framework for human mRNA degradation. www.ncbi.nlm.ni...
PMID 15029244 View Gene Set 1.331e-05 57 0.001284 25 Mammalian Cdh1/Fzr mediates its own degradation. www.ncbi.nlm.ni...
PMID 17148452 View Gene Set 1.308e-05 87 0.001284 25 Characterization of the interactome of the human MutL homologues MLH1 PMS1 and PMS2. www.ncbi.nlm.ni...
PMID 15324660 View Gene Set 1.573e-05 242 0.00146 27 Proteomic functional and domain-based analysis of in vivo 14-3-3 binding proteins involved in cytoskeletal regulation and cellular organization. www.ncbi.nlm.ni...
PMID 11076961 View Gene Set 2.146e-05 14 0.001735 28 Characterization of vertebrate cohesin complexes and their regulation in prophase. www.ncbi.nlm.ni...
PMID 15009096 View Gene Set 2.143e-05 39 0.001735 28 Proteomics analysis of the centromere complex from HeLa interphase cells: UV-damaged DNA binding protein 1 (DDB-1) is a component of the CEN-complex while BMI-1 is transiently co-localized with the centromeric region in interphase. www.ncbi.nlm.ni...
PMID 15057823 View Gene Set 2.001e-05 166 0.001735 28 The DNA sequence and analysis of human chromosome 13. www.ncbi.nlm.ni...
PMID 15456888 View Gene Set 2.029e-05 24 0.001735 28 The WW domain-containing proteins interact with the early spliceosome and participate in pre-mRNA splicing in vivo. www.ncbi.nlm.ni...
PMID 15252450 View Gene Set 3.938e-05 49 0.003085 32 Lineage-specific gene duplication and loss in human and great ape evolution. www.ncbi.nlm.ni...
PMID 16387653 View Gene Set 4.33e-05 42 0.003289 33 ING tumor suppressor proteins are critical regulators of chromatin acetylation required for genome expression and perpetuation. www.ncbi.nlm.ni...
PMID 11095689 View Gene Set 4.497e-05 17 0.003316 34 The human homolog of Saccharomyces cerevisiae Mcm10 interacts with replication factors and dissociates from nuclease-resistant nuclear structures in G(2) phase. www.ncbi.nlm.ni...
PMID 12228227 View Gene Set 4.906e-05 30 0.003416 35 Docking of HIV-1 Vpr to the nuclear envelope is mediated by the interaction with the nucleoporin hCG1. www.ncbi.nlm.ni...
PMID 18997788 View Gene Set 4.893e-05 10 0.003416 35 The APC/C maintains the spindle assembly checkpoint by targeting Cdc20 for destruction. www.ncbi.nlm.ni...
PMID 17363900 View Gene Set 5.155e-05 14 0.003493 37 The human Nup107-160 nuclear pore subcomplex contributes to proper kinetochore functions. www.ncbi.nlm.ni...
PMID 11535616 View Gene Set 5.775e-05 18 0.003712 38 Checkpoint inhibition of the APC/C in HeLa cells is mediated by a complex of BUBR1 BUB3 CDC20 and MAD2. www.ncbi.nlm.ni...
PMID 14593737 View Gene Set 5.775e-05 18 0.003712 38 The mitotic checkpoint: a signaling pathway that allows a single unattached kinetochore to inhibit mitotic exit. www.ncbi.nlm.ni...
PMID 20508983 View Gene Set 6.555e-05 102 0.004108 40 Centrosome-related genes genetic variation and risk of breast cancer. www.ncbi.nlm.ni...
PMID 12045100 View Gene Set 6.852e-05 18 0.00419 41 DNA replication in eukaryotic cells. www.ncbi.nlm.ni...
PMID 18063578 View Gene Set 8.456e-05 31 0.00493 42 The layered structure of human mitochondrial DNA nucleoids. www.ncbi.nlm.ni...
PMID 18162579 View Gene Set 8.426e-05 22 0.00493 42 Identification of novel human Cdt1-binding proteins by a proteomics approach: proteolytic regulation by APC/CCdh1. www.ncbi.nlm.ni...
PMID 12391170 View Gene Set 8.915e-05 18 0.005079 44 Characterization of human RNA polymerase III identifies orthologues for Saccharomyces cerevisiae RNA polymerase III subunits. www.ncbi.nlm.ni...
PMID 15146057 View Gene Set 0.0001054 10 0.005704 45 The entire Nup107-160 complex including three new members is targeted as one entity to kinetochores in mitosis. www.ncbi.nlm.ni...
PMID 15146197 View Gene Set 0.0001069 693 0.005704 45 Transcriptome characterization elucidates signaling networks that control human ES cell growth and differentiation. www.ncbi.nlm.ni...
PMID 17577209 View Gene Set 0.000104 28 0.005704 45 The interactome of the histone gene regulatory factor HiNF-P suggests novel cell cycle related roles in transcriptional control and RNA processing. www.ncbi.nlm.ni...
PMID 10436018 View Gene Set 0.0001187 15 0.006202 48 The Cdc6 nucleotide-binding site regulates its activity in DNA replication in human cells. www.ncbi.nlm.ni...
PMID 12837248 View Gene Set 0.0001274 22 0.006517 49 The chromatin-remodeling complex WINAC targets a nuclear receptor to promoters and is impaired in Williams syndrome. www.ncbi.nlm.ni...
PMID 11742988 View Gene Set 0.0001336 20 0.006698 50 APC/C-mediated destruction of the centrosomal kinase Nek2A occurs in early mitosis and depends upon a cyclin A-type D-box. www.ncbi.nlm.ni...
PMID 10601273 View Gene Set 0.0001508 21 0.007134 51 Nuclear import of hepatic glucokinase depends upon glucokinase regulatory protein whereas export is due to a nuclear export signal sequence in glucokinase. www.ncbi.nlm.ni...
PMID 15196461 View Gene Set 0.0001454 11 0.007134 51 The highly conserved and multifunctional NuA4 HAT complex. www.ncbi.nlm.ni...
PMID 15815621 View Gene Set 0.0001481 437 0.007134 51 Generation and annotation of the DNA sequences of human chromosomes 2 and 4. www.ncbi.nlm.ni...
PMID 16364912 View Gene Set 0.00017 12 0.007893 54 Localization of the coactivator Cdh1 and the cullin subunit Apc2 in a cryo-electron microscopy model of vertebrate APC/C. www.ncbi.nlm.ni...
PMID 10793135 View Gene Set 0.0001784 18 0.008132 55 Mitotic regulation of the APC activator proteins CDC20 and CDH1. www.ncbi.nlm.ni...
PMID 14564014 View Gene Set 0.0001997 47 0.008883 56 Induction of APOBEC3G ubiquitination and degradation by an HIV-1 Vif-Cul5-SCF complex. www.ncbi.nlm.ni...
PMID 18485873 View Gene Set 0.000202 13 0.008883 56 Mechanism of ubiquitin-chain formation by the human anaphase-promoting complex. www.ncbi.nlm.ni...
PMID 10318877 View Gene Set 0.0002138 10 0.00924 58 Characterization of the DOC1/APC10 subunit of the yeast and the human anaphase-promoting complex. www.ncbi.nlm.ni...
PMID 11125146 View Gene Set 0.0002591 10 0.01101 59 Inhibition of eukaryotic DNA replication by geminin binding to Cdt1. www.ncbi.nlm.ni...
PMID 20056645 View Gene Set 0.0002755 32 0.01132 60 Association of mitotic regulation pathway polymorphisms with pancreatic cancer risk and outcome. www.ncbi.nlm.ni...
PMID 20085707 View Gene Set 0.0002713 42 0.01132 60 Aire's partners in the molecular control of immunological tolerance. www.ncbi.nlm.ni...
PMID 10893419 View Gene Set 0.0002957 41 0.0114 62 Degradation of HIV-1 integrase by the N-end rule pathway. www.ncbi.nlm.ni...
PMID 12419264 View Gene Set 0.0002957 41 0.0114 62 The RTP site shared by the HIV-1 Tat protein and the 11S regulator subunit alpha is crucial for their effects on proteasome function including antigen processing. www.ncbi.nlm.ni...
PMID 14550573 View Gene Set 0.0002957 41 0.0114 62 Human immunodeficiency virus-1 Tat protein interacts with distinct proteasomal alpha and beta subunits. www.ncbi.nlm.ni...
PMID 9079628 View Gene Set 0.0002957 41 0.0114 62 HIV-1 tat inhibits the 20 S proteasome and its 11 S regulator-mediated activation. www.ncbi.nlm.ni...
PMID 9710619 View Gene Set 0.0003062 16 0.01163 66 A human RNA polymerase II complex containing factors that modify chromatin structure. www.ncbi.nlm.ni...
PMID 12791267 View Gene Set 0.000341 50 0.01276 67 Prophase destruction of Emi1 by the SCF(betaTrCP/Slimb) ubiquitin ligase activates the anaphase promoting complex to allow progression beyond prometaphase. www.ncbi.nlm.ni...
PMID 15146077 View Gene Set 0.0003577 32 0.01319 68 The human 18S U11/U12 snRNP contains a set of novel proteins not found in the U2-dependent spliceosome. www.ncbi.nlm.ni...
PMID 17525332 View Gene Set 0.0003952 22 0.01436 69 ATM and ATR substrate analysis reveals extensive protein networks responsive to DNA damage. www.ncbi.nlm.ni...
PMID 20516191 View Gene Set 0.0004088 12 0.01464 70 A rational nomenclature for serine/arginine-rich protein splicing factors (SR proteins). www.ncbi.nlm.ni...
PMID 19690177 View Gene Set 0.0004293 31 0.01516 71 Polymorphic variants in hereditary pancreatic cancer genes are not associated with pancreatic cancer risk. www.ncbi.nlm.ni...
PMID 9878551 View Gene Set 0.0004543 34 0.01582 72 cDNA of eight nuclear encoded subunits of NADH:ubiquinone oxidoreductase: human complex I cDNA characterization completed. www.ncbi.nlm.ni...
PMID 10931946 View Gene Set 0.0004634 118 0.01591 73 Gene expression profiling in the human hypothalamus-pituitary-adrenal axis and full-length cDNA cloning. www.ncbi.nlm.ni...
PMID 12930902 View Gene Set 0.00047 11 0.01592 74 The alternative Ctf18-Dcc1-Ctf8-replication factor C complex required for sister chromatid cohesion loads proliferating cell nuclear antigen onto DNA. www.ncbi.nlm.ni...
PMID 11543634 View Gene Set 0.0005074 58 0.01644 75 The human mitochondrial ribosomal protein genes: mapping of 54 genes to the chromosomes and implications for human disorders. www.ncbi.nlm.ni...
PMID 12167863 View Gene Set 0.0005641 43 0.01644 75 Isolation of a human gene that inhibits HIV-1 infection and is suppressed by the viral Vif protein. www.ncbi.nlm.ni...
PMID 12808465 View Gene Set 0.0005641 43 0.01644 75 The cytidine deaminase CEM15 induces hypermutation in newly synthesized HIV-1 DNA. www.ncbi.nlm.ni...
PMID 12808466 View Gene Set 0.0005641 43 0.01644 75 Broad antiretroviral defence by human APOBEC3G through lethal editing of nascent reverse transcripts. www.ncbi.nlm.ni...
PMID 12809610 View Gene Set 0.0005641 43 0.01644 75 DNA deamination mediates innate immunity to retroviral infection. www.ncbi.nlm.ni...
PMID 12859895 View Gene Set 0.0005369 47 0.01644 75 Species-specific exclusion of APOBEC3G from HIV-1 virions by Vif. www.ncbi.nlm.ni...
PMID 12970355 View Gene Set 0.0005641 43 0.01644 75 The enzymatic activity of CEM15/Apobec-3G is essential for the regulation of the infectivity of HIV-1 virion but not a sole determinant of its antiviral activity. www.ncbi.nlm.ni...
PMID 14527406 View Gene Set 0.0005641 43 0.01644 75 HIV-1 Vif blocks the antiviral activity of APOBEC3G by impairing both its translation and intracellular stability. www.ncbi.nlm.ni...
PMID 14528300 View Gene Set 0.0005641 43 0.01644 75 The antiretroviral enzyme APOBEC3G is degraded by the proteasome in response to HIV-1 Vif. www.ncbi.nlm.ni...
PMID 14528301 View Gene Set 0.0005641 43 0.01644 75 HIV-1 Vif protein binds the editing enzyme APOBEC3G and induces its degradation. www.ncbi.nlm.ni...
PMID 14557625 View Gene Set 0.0005641 43 0.01644 75 The human immunodeficiency virus type 1 Vif protein reduces intracellular expression and inhibits packaging of APOBEC3G (CEM15) a cellular inhibitor of virus infectivity. www.ncbi.nlm.ni...
PMID 14559993 View Gene Set 0.0004956 51 0.01644 75 Regulation of alternative splicing by SRrp86 and its interacting proteins. www.ncbi.nlm.ni...
PMID 11877377 View Gene Set 0.0006671 11 0.01672 87 SMC1 is a downstream effector in the ATM/NBS1 branch of the human S-phase checkpoint. www.ncbi.nlm.ni...
PMID 12719574 View Gene Set 0.0006551 42 0.01672 87 Comprehensive investigation of the molecular defect in vif-deficient human immunodeficiency virus type 1 virions. www.ncbi.nlm.ni...
PMID 12750511 View Gene Set 0.0006551 42 0.01672 87 Hypermutation of HIV-1 DNA in the absence of the Vif protein. www.ncbi.nlm.ni...
PMID 12830140 View Gene Set 0.0006551 42 0.01672 87 DNA deamination: not just a trigger for antibody diversification but also a mechanism for defense against retroviruses. www.ncbi.nlm.ni...
PMID 12840737 View Gene Set 0.0006551 42 0.01672 87 Good to CU. www.ncbi.nlm.ni...
PMID 12914693 View Gene Set 0.0006551 42 0.01672 87 Death by deamination: a novel host restriction system for HIV-1. www.ncbi.nlm.ni...
PMID 12920286 View Gene Set 0.0006551 42 0.01672 87 Virology. Weapons of mutational destruction. www.ncbi.nlm.ni...
PMID 14614829 View Gene Set 0.0006551 42 0.01672 87 The Vif protein of HIV triggers degradation of the human antiretroviral DNA deaminase APOBEC3G. www.ncbi.nlm.ni...
PMID 15130578 View Gene Set 0.000603 22 0.01672 87 Why do cells need an assembly machine for RNA-protein complexes? www.ncbi.nlm.ni...
PMID 19237606 View Gene Set 0.0006604 84 0.01672 87 Genetic polymorphisms in 85 DNA repair genes and bladder cancer risk. www.ncbi.nlm.ni...
PMID 19536092 View Gene Set 0.0006536 55 0.01672 87 Explorative study to identify novel candidate genes related to oxaliplatin efficacy and toxicity using a DNA repair array. www.ncbi.nlm.ni...
PMID 19710015 View Gene Set 0.000629 48 0.01672 87 The metastasis efficiency modifier ribosomal RNA processing 1 homolog B (RRP1B) is a chromatin-associated factor. www.ncbi.nlm.ni...
PMID 9811770 View Gene Set 0.0006551 42 0.01672 87 An endogenous inhibitor of human immunodeficiency virus in human lymphocytes is overcome by the viral Vif protein. www.ncbi.nlm.ni...
PMID 9846577 View Gene Set 0.0006551 42 0.01672 87 Evidence for a newly discovered cellular anti-HIV-1 phenotype. www.ncbi.nlm.ni...
PMID 11101529 View Gene Set 0.0006926 34 0.01719 101 Functional analysis of the human CDC5L complex and identification of its components by mass spectrometry. www.ncbi.nlm.ni...
PMID 16622420 View Gene Set 0.0007472 14 0.01834 102 The CENP-H-I complex is required for the efficient incorporation of newly synthesized CENP-A into centromeres. www.ncbi.nlm.ni...
PMID 19138993 View Gene Set 0.0007535 25 0.01834 102 Genetic variations in microRNA-related genes are novel susceptibility loci for esophageal cancer risk. www.ncbi.nlm.ni...
PMID 11714285 View Gene Set 0.0008614 11 0.01928 104 The appended C-domain of human methionyl-tRNA synthetase has a tRNA-sequestering function. www.ncbi.nlm.ni...
PMID 15232106 View Gene Set 0.0008429 30 0.01928 104 Self-assembling protein microarrays. www.ncbi.nlm.ni...
PMID 16055448 View Gene Set 0.0008614 11 0.01928 104 The C-terminal appended domain of human cytosolic leucyl-tRNA synthetase is indispensable in its interaction with arginyl-tRNA synthetase in the multi-tRNA synthetase complex. www.ncbi.nlm.ni...
PMID 8052601 View Gene Set 0.0008614 11 0.01928 104 Human cytoplasmic isoleucyl-tRNA synthetase: selective divergence of the anticodon-binding domain and acquisition of a new structural unit. www.ncbi.nlm.ni...
PMID 8078941 View Gene Set 0.0008614 11 0.01928 104 Evolution of the Glx-tRNA synthetase family: the glutaminyl enzyme as a case of horizontal gene transfer. www.ncbi.nlm.ni...
PMID 8188258 View Gene Set 0.0008614 11 0.01928 104 The human EPRS locus (formerly the QARS locus): a gene encoding a class I and a class II aminoacyl-tRNA synthetase. www.ncbi.nlm.ni...
PMID 8449960 View Gene Set 0.0008614 11 0.01928 104 Expression of human aspartyl-tRNA synthetase in Escherichia coli. Functional analysis of the N-terminal putative amphiphilic helix. www.ncbi.nlm.ni...
PMID 8895581 View Gene Set 0.0008236 12 0.01928 104 Purification and biochemical heterogeneity of the mammalian SWI-SNF complex. www.ncbi.nlm.ni...
PMID 9278442 View Gene Set 0.0008614 11 0.01928 104 Human lysyl-tRNA synthetase accepts nucleotide 73 variants and rescues Escherichia coli double-defective mutant. www.ncbi.nlm.ni...
PMID 8811196 View Gene Set 0.0009453 37 0.02097 113 Structure and functions of the 20S and 26S proteasomes. www.ncbi.nlm.ni...
PMID 8764062 View Gene Set 0.0009759 18 0.02146 114 Interaction of human immunodeficiency virus type 1 Tat with a unique site of TFIID inhibits negative cofactor Dr1 and stabilizes the TFIID-TFIIA complex. www.ncbi.nlm.ni...
PMID 15647280 View Gene Set 0.001026 17 0.02236 115 The mammalian YL1 protein is a shared subunit of the TRRAP/TIP60 histone acetyltransferase and SRCAP complexes. www.ncbi.nlm.ni...
PMID 18270339 View Gene Set 0.001071 57 0.02315 116 Comprehensive analysis of DNA repair gene variants and risk of meningioma. www.ncbi.nlm.ni...
PMID 20226869 View Gene Set 0.001083 25 0.0232 117 Association between genetic variants in the base excision repair pathway and outcomes after hematopoietic cell transplantations. www.ncbi.nlm.ni...
PMID 16622419 View Gene Set 0.001104 16 0.02345 118 The human CENP-A centromeric nucleosome-associated complex. www.ncbi.nlm.ni...
PMID 12171929 View Gene Set 0.001171 31 0.02446 119 A proteomics approach to identify proliferating cell nuclear antigen (PCNA)-binding proteins in human cell lysates. Identification of the human CHL12/RFCs2-5 complex as a novel PCNA-binding protein. www.ncbi.nlm.ni...
PMID 19660095 View Gene Set 0.001165 11 0.02446 119 A synopsis of eukaryotic Nalpha-terminal acetyltransferases: nomenclature subunits and substrates. www.ncbi.nlm.ni...
PMID 12611891 View Gene Set 0.001229 40 0.02546 121 The subunit composition of the human NADH dehydrogenase obtained by rapid one-step immunopurification. www.ncbi.nlm.ni...
PMID 9121429 View Gene Set 0.001283 39 0.02637 122 The human immunodeficiency virus transactivator Tat interacts with the RNA polymerase II holoenzyme. www.ncbi.nlm.ni...
PMID 11230166 View Gene Set 0.001305 748 0.0266 123 Toward a catalog of human genes and proteins: sequencing and analysis of 500 novel complete protein coding human cDNAs. www.ncbi.nlm.ni...
PMID 1403646 View Gene Set 0.001347 17 0.02723 124 The human immunodeficiency virus tat protein increases the transcription of human Alu repeated sequences by increasing the activity of the cellular transcription factor TFIIIC. www.ncbi.nlm.ni...
PMID 15504738 View Gene Set 0.00146 19 0.02927 125 Genes affecting the cell cycle growth maintenance and drug sensitivity are preferentially regulated by anti-HER2 antibody through phosphatidylinositol 3-kinase-AKT signaling. www.ncbi.nlm.ni...
PMID 10783165 View Gene Set 0.001491 12 0.02953 126 BASC a super complex of BRCA1-associated proteins involved in the recognition and repair of aberrant DNA structures. www.ncbi.nlm.ni...
PMID 12838346 View Gene Set 0.001496 68 0.02953 126 Human and mouse proteases: a comparative genomic approach. www.ncbi.nlm.ni...
PMID 19064571 View Gene Set 0.001517 75 0.02972 128 Polymorphisms in mitochondrial genes and prostate cancer risk. www.ncbi.nlm.ni...
PMID 15334068 View Gene Set 0.00159 19 0.03044 129 Suppression subtractive hybridization and expression profiling identifies a unique set of genes overexpressed in non-small-cell lung cancer. www.ncbi.nlm.ni...
PMID 17478428 View Gene Set 0.001574 10 0.03044 129 A proteomic analysis of ataxia telangiectasia-mutated (ATM)/ATM-Rad3-related (ATR) substrates identifies the ubiquitin-proteasome system as a regulator for DNA damage checkpoints. www.ncbi.nlm.ni...
PMID 20193073 View Gene Set 0.001591 52 0.03044 129 Chaperonin genes on the rise: new divergent classes and intense duplication in human and other vertebrate genomes. www.ncbi.nlm.ni...
PMID 19064565 View Gene Set 0.001662 13 0.03157 132 Common single-nucleotide polymorphisms in DNA double-strand break repair genes and breast cancer risk. www.ncbi.nlm.ni...
PMID 9153318 View Gene Set 0.001708 11 0.0322 133 CCAAT binding NF-Y-TBP interactions: NF-YB and NF-YC require short domains adjacent to their histone fold motifs for association with TBP basic residues. www.ncbi.nlm.ni...
PMID 12070128 View Gene Set 0.001753 17 0.0328 134 Human securin proteolysis is controlled by the spindle checkpoint and reveals when the APC/C switches from activation by Cdc20 to Cdh1. www.ncbi.nlm.ni...
PMID 9159119 View Gene Set 0.0018 12 0.03343 135 BRCA1 is a component of the RNA polymerase II holoenzyme. www.ncbi.nlm.ni...
PMID 14966270 View Gene Set 0.001945 19 0.03584 136 Structural and functional conservation of the NuA4 histone acetyltransferase complex from yeast to humans. www.ncbi.nlm.ni...
PMID 19584272 View Gene Set 0.002093 11 0.03829 137 Modification of ovarian cancer risk by BRCA1/2-interacting genes in a multicenter cohort of BRCA1/2 mutation carriers. www.ncbi.nlm.ni...
PMID 10922056 View Gene Set 0.00218 12 0.03876 138 The RING-H2 finger protein APC11 and the E2 enzyme UBC4 are sufficient to ubiquitinate substrates of the anaphase-promoting complex. www.ncbi.nlm.ni...
PMID 10964507 View Gene Set 0.002152 15 0.03876 138 Heat-shock protein 70 can replace viral protein R of HIV-1 during nuclear import of the viral preintegration complex. www.ncbi.nlm.ni...
PMID 12601814 View Gene Set 0.002171 12 0.03876 138 Novel subunits of the TATA binding protein free TAFII-containing transcription complex identified by matrix-assisted laser desorption/ionization-time of flight mass spectrometry following one-dimensional gel electrophoresis. www.ncbi.nlm.ni...
PMID 12805554 View Gene Set 0.002149 23 0.03876 138 Comprehensive identification of human bZIP interactions with coiled-coil arrays. www.ncbi.nlm.ni...
PMID 12515382 View Gene Set 0.00221 10 0.03902 142 The human LSm1-7 proteins colocalize with the mRNA-degrading enzymes Dcp1/2 and Xrnl in distinct cytoplasmic foci. www.ncbi.nlm.ni...
PMID 18669648 View Gene Set 0.002238 13 0.03924 143 A quantitative atlas of mitotic phosphorylation. www.ncbi.nlm.ni...
PMID 10725331 View Gene Set 0.002268 14 0.03939 144 Gemin4. A novel component of the SMN complex that is found in both gems and nucleoli. www.ncbi.nlm.ni...
PMID 14578343 View Gene Set 0.002278 19 0.03939 144 Phosphopeptide binding specificities of BRCA1 COOH-terminal (BRCT) domains. www.ncbi.nlm.ni...
PMID 10851237 View Gene Set 0.002333 11 0.03983 146 Specific sequences of the Sm and Sm-like (Lsm) proteins mediate their interaction with the spinal muscular atrophy disease gene product (SMN). www.ncbi.nlm.ni...
PMID 20496165 View Gene Set 0.002336 68 0.03983 146 Comprehensive screen of genetic variation in DNA repair pathway genes and postmenopausal breast cancer risk. www.ncbi.nlm.ni...
PMID 15142377 View Gene Set 0.002444 19 0.0414 148 Partner molecules of accessory protein Vpr of the human immunodeficiency virus type 1. www.ncbi.nlm.ni...
PMID 10608806 View Gene Set 0.002502 25 0.0421 149 Substrate specificities and identification of putative substrates of ATM kinase family members. www.ncbi.nlm.ni...
PMID 11256614 View Gene Set 0.002539 522 0.04243 150 Systematic subcellular localization of novel proteins identified by large-scale cDNA sequencing. www.ncbi.nlm.ni...
PMID 11931757 View Gene Set 0.002576 22 0.04276 151 Human origin recognition complex large subunit is degraded by ubiquitin-mediated proteolysis after initiation of DNA replication. www.ncbi.nlm.ni...
PMID 11500380 View Gene Set 0.002626 10 0.04302 152 A novel U2 and U11/U12 snRNP protein that associates with the pre-mRNA branch site. www.ncbi.nlm.ni...
PMID 14743216 View Gene Set 0.00262 132 0.04302 152 A physical and functional map of the human TNF-alpha/NF-kappa B signal transduction pathway. www.ncbi.nlm.ni...
PMID 11799066 View Gene Set 0.002679 21 0.04334 154 Isolating human transcription factor targets by coupling chromatin immunoprecipitation and CpG island microarray analysis. www.ncbi.nlm.ni...
PMID 9822671 View Gene Set 0.002673 10 0.04334 154 Replication factor C disengages from proliferating cell nuclear antigen (PCNA) upon sliding clamp formation and PCNA itself tethers DNA polymerase delta to DNA. www.ncbi.nlm.ni...
PMID 11078522 View Gene Set 0.002802 12 0.04474 156 The human SWI/SNF-B chromatin-remodeling complex is related to yeast rsc and localizes at kinetochores of mitotic chromosomes. www.ncbi.nlm.ni...
PMID 12189208 View Gene Set 0.002795 12 0.04474 156 Identification of a transcriptionally active peroxisome proliferator-activated receptor alpha -interacting cofactor complex in rat liver and characterization of PRIC285 as a coactivator. www.ncbi.nlm.ni...
PMID 17137291 View Gene Set 0.002871 10 0.04556 158 Physical interaction of two cancer-testis antigens MAGE-C1 (CT7) and NY-ESO-1 (CT6). www.ncbi.nlm.ni...
PMID 9111189 View Gene Set 0.002951 16 0.04653 159 Which DNA polymerases are used for DNA-repair in eukaryotes? www.ncbi.nlm.ni...
PMID 17322308 View Gene Set 0.003093 13 0.04816 160 Structural characterization of the human eukaryotic initiation factor 3 protein complex by mass spectrometry. www.ncbi.nlm.ni...
PMID 18599441 View Gene Set 0.003093 13 0.04816 160 Mass spectrometry reveals modularity and a complete subunit interaction map of the eukaryotic translation factor eIF3. www.ncbi.nlm.ni...

Gene Set Collection: Prosite

Arguments: refPop=all, featureType=featureNames, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null PS50102 View Gene Set 1.222e-15 229 8.984e-13 1 RRM expasy.org/pros...
Null PS00633 View Gene Set 3.583e-06 26 0.001317 2 BROMODOMAIN_1 expasy.org/pros...
Null PS50014 View Gene Set 1.838e-05 41 0.004503 3 BROMODOMAIN_2 expasy.org/pros...
Null PS50174 View Gene Set 3.565e-05 25 0.005412 4 G_PATCH expasy.org/pros...
Null PS51194 View Gene Set 3.682e-05 113 0.005412 4 HELICASE_CTER expasy.org/pros...
Null PS51192 View Gene Set 9.737e-05 112 0.01193 6 HELICASE_ATP_BIND_1 expasy.org/pros...
Null PS50103 View Gene Set 0.0002343 60 0.02152 7 ZF_C3H1 expasy.org/pros...
Null PS50128 View Gene Set 0.0002132 6 0.02152 7 SURP expasy.org/pros...
Null PS50097 View Gene Set 0.0002992 141 0.02248 9 BTB expasy.org/pros...
Null PS50237 View Gene Set 0.0003059 29 0.02248 9 HECT expasy.org/pros...
Null PS00674 View Gene Set 0.0003956 29 0.02529 11 AAA expasy.org/pros...
Null PS00973 View Gene Set 0.0004255 75 0.02529 11 UCH_2_2 expasy.org/pros...
Null PS50076 View Gene Set 0.0004473 51 0.02529 11 DNAJ_2 expasy.org/pros...
Null PS50235 View Gene Set 0.0005126 83 0.02691 14 UCH_2_3 expasy.org/pros...

Gene Set Collection: Enzyme

Arguments: refPop=all, featureType=featureNames, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null EC:1.6.5.3 View Gene Set 0.0005234 43 0.04135 1 NADH dehydrogenase (ubiquinone) expasy.org/enzy...
Null EC:1.6.99.3 View Gene Set 0.0005234 35 0.04135 1 NADH dehydrogenase expasy.org/enzy...

Gene Set Collection: ppi.BioGRID

Arguments: refPop=all, featureType=featureNames, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null ppi.155871 View Gene Set 4.142e-15 236 9.514e-12 1 Protein-protein-interaction for 155871 www.ncbi.nlm.ni...
Null ppi.MEPCE View Gene Set 6.804e-09 147 7.814e-06 2 Protein-protein-interaction for MEPCE www.ncbi.nlm.ni...
Null ppi.RPAP2 View Gene Set 8.001e-07 43 0.0006126 3 Protein-protein-interaction for RPAP2 www.ncbi.nlm.ni...
Null ppi.ORC6L View Gene Set 1.592e-06 11 0.0009141 4 Protein-protein-interaction for ORC6L www.ncbi.nlm.ni...
Null ppi.RNPS1 View Gene Set 3.503e-05 38 0.01354 5 Protein-protein-interaction for RNPS1 www.ncbi.nlm.ni...
Null ppi.VDR View Gene Set 4.18e-05 26 0.01354 5 Protein-protein-interaction for VDR www.ncbi.nlm.ni...
Null ppi.BRCC3 View Gene Set 4.715e-05 22 0.01354 5 Protein-protein-interaction for BRCC3 www.ncbi.nlm.ni...
Null ppi.EPC1 View Gene Set 4.004e-05 7 0.01354 5 Protein-protein-interaction for EPC1 www.ncbi.nlm.ni...
Null ppi.ORC3L View Gene Set 6.583e-05 9 0.01594 9 Protein-protein-interaction for ORC3L www.ncbi.nlm.ni...
Null ppi.PSMD13 View Gene Set 6.938e-05 20 0.01594 9 Protein-protein-interaction for PSMD13 www.ncbi.nlm.ni...
Null ppi.UCHL5 View Gene Set 0.0001017 33 0.0198 11 Protein-protein-interaction for UCHL5 www.ncbi.nlm.ni...
Null ppi.ING3 View Gene Set 0.0001034 10 0.0198 11 Protein-protein-interaction for ING3 www.ncbi.nlm.ni...
Null ppi.GPN1 View Gene Set 0.0001179 27 0.02083 13 Protein-protein-interaction for GPN1 www.ncbi.nlm.ni...
Null ppi.RNMTL1 View Gene Set 0.0001401 8 0.02299 14 Protein-protein-interaction for RNMTL1 www.ncbi.nlm.ni...
Null ppi.CDC16 View Gene Set 0.0001506 10 0.02306 15 Protein-protein-interaction for CDC16 www.ncbi.nlm.ni...
Null ppi.RPA1 View Gene Set 0.0001625 23 0.02332 16 Protein-protein-interaction for RPA1 www.ncbi.nlm.ni...
Null ppi.MED30 View Gene Set 0.0001804 26 0.02438 17 Protein-protein-interaction for MED30 www.ncbi.nlm.ni...
Null ppi.KIAA1377 View Gene Set 0.0001912 57 0.0244 18 Protein-protein-interaction for KIAA1377 www.ncbi.nlm.ni...
Null ppi.SEH1L View Gene Set 0.0002102 6 0.02542 19 Protein-protein-interaction for SEH1L www.ncbi.nlm.ni...
Null ppi.TAF11 View Gene Set 0.0002411 10 0.02769 20 Protein-protein-interaction for TAF11 www.ncbi.nlm.ni...
Null ppi.MCPH1 View Gene Set 0.0003105 17 0.03396 21 Protein-protein-interaction for MCPH1 www.ncbi.nlm.ni...
Null ppi.C19orf62 View Gene Set 0.0003292 29 0.03437 22 Protein-protein-interaction for C19orf62 www.ncbi.nlm.ni...
Null ppi.SRRM1 View Gene Set 0.0003579 64 0.03574 23 Protein-protein-interaction for SRRM1 www.ncbi.nlm.ni...
Null ppi.NUP43 View Gene Set 0.0003957 6 0.03663 24 Protein-protein-interaction for NUP43 www.ncbi.nlm.ni...
Null ppi.C20orf20 View Gene Set 0.0004075 15 0.03663 24 Protein-protein-interaction for C20orf20 www.ncbi.nlm.ni...
Null ppi.TAF12 View Gene Set 0.0004146 10 0.03663 24 Protein-protein-interaction for TAF12 www.ncbi.nlm.ni...
Null ppi.CBX5 View Gene Set 0.0005328 38 0.045 27 Protein-protein-interaction for CBX5 www.ncbi.nlm.ni...
Null ppi.MYOCD View Gene Set 0.0005486 8 0.045 27 Protein-protein-interaction for MYOCD www.ncbi.nlm.ni...
Null ppi.NUP98 View Gene Set 0.0005962 10 0.04565 29 Protein-protein-interaction for NUP98 www.ncbi.nlm.ni...
Null ppi.ATG4C View Gene Set 0.0005955 10 0.04565 29 Protein-protein-interaction for ATG4C www.ncbi.nlm.ni...
Null ppi.CCDC85B View Gene Set 0.0006658 49 0.04634 31 Protein-protein-interaction for CCDC85B www.ncbi.nlm.ni...
Null ppi.LSM4 View Gene Set 0.0006646 10 0.04634 31 Protein-protein-interaction for LSM4 www.ncbi.nlm.ni...
Null ppi.ZEB1 View Gene Set 0.0006593 6 0.04634 31 Protein-protein-interaction for ZEB1 www.ncbi.nlm.ni...

Gene Set Collection: ppi.HPRD

Arguments: refPop=all, featureType=featureNames, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null ppi.NDC80 View Gene Set 2.9e-05 10 0.03443 1 Protein-protein-interaction for NDC80 www.ncbi.nlm.ni...
Null ppi.ORC6L View Gene Set 2.558e-05 10 0.03443 1 Protein-protein-interaction for ORC6L www.ncbi.nlm.ni...
Null ppi.TOP1 View Gene Set 5.655e-05 9 0.04475 3 Protein-protein-interaction for TOP1 www.ncbi.nlm.ni...

Gene Set Collection: ppi.anyDB

Arguments: refPop=all, featureType=featureNames, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null ppi.155871 View Gene Set 8.079e-15 251 2.904e-11 1 Protein-protein-interaction for 155871 www.ncbi.nlm.ni...
Null ppi.MEPCE View Gene Set 6.804e-09 147 1.223e-05 2 Protein-protein-interaction for MEPCE www.ncbi.nlm.ni...
Null ppi.ORC6L View Gene Set 2.664e-07 15 0.0003191 3 Protein-protein-interaction for ORC6L www.ncbi.nlm.ni...
Null ppi.RPAP2 View Gene Set 8.001e-07 43 0.0007189 4 Protein-protein-interaction for RPAP2 www.ncbi.nlm.ni...
Null ppi.RNPS1 View Gene Set 5.146e-06 44 0.003699 5 Protein-protein-interaction for RNPS1 www.ncbi.nlm.ni...
Null ppi.ORC3L View Gene Set 1.979e-05 16 0.01185 6 Protein-protein-interaction for ORC3L www.ncbi.nlm.ni...
Null ppi.EPC1 View Gene Set 2.514e-05 8 0.01291 7 Protein-protein-interaction for EPC1 www.ncbi.nlm.ni...
Null ppi.NDC80 View Gene Set 2.9e-05 10 0.01303 8 Protein-protein-interaction for NDC80 www.ncbi.nlm.ni...
Null ppi.BRCC3 View Gene Set 4.715e-05 22 0.01883 9 Protein-protein-interaction for BRCC3 www.ncbi.nlm.ni...
Null ppi.NAA38 View Gene Set 5.788e-05 28 0.0192 10 Protein-protein-interaction for NAA38 www.ncbi.nlm.ni...
Null ppi.RPA1 View Gene Set 5.875e-05 24 0.0192 10 Protein-protein-interaction for RPA1 www.ncbi.nlm.ni...
Null ppi.PSMD13 View Gene Set 6.938e-05 20 0.02078 12 Protein-protein-interaction for PSMD13 www.ncbi.nlm.ni...
Null ppi.GPN1 View Gene Set 0.0001179 27 0.03134 13 Protein-protein-interaction for GPN1 www.ncbi.nlm.ni...
Null ppi.UCHL5 View Gene Set 0.0001221 34 0.03134 13 Protein-protein-interaction for UCHL5 www.ncbi.nlm.ni...
Null ppi.RNMTL1 View Gene Set 0.0001401 8 0.03357 15 Protein-protein-interaction for RNMTL1 www.ncbi.nlm.ni...
Null ppi.LSM2 View Gene Set 0.0001677 26 0.03603 16 Protein-protein-interaction for LSM2 www.ncbi.nlm.ni...
Null ppi.VDR View Gene Set 0.0001744 37 0.03603 16 Protein-protein-interaction for VDR www.ncbi.nlm.ni...
Null ppi.MED30 View Gene Set 0.0001804 26 0.03603 16 Protein-protein-interaction for MED30 www.ncbi.nlm.ni...
Null ppi.EIF4ENIF1 View Gene Set 0.0002111 7 0.03794 19 Protein-protein-interaction for EIF4ENIF1 www.ncbi.nlm.ni...
Null ppi.SEH1L View Gene Set 0.0002102 6 0.03794 19 Protein-protein-interaction for SEH1L www.ncbi.nlm.ni...
Null ppi.C19orf62 View Gene Set 0.0003292 29 0.0455 21 Protein-protein-interaction for C19orf62 www.ncbi.nlm.ni...
Null ppi.XPA View Gene Set 0.0003239 14 0.0455 21 Protein-protein-interaction for XPA www.ncbi.nlm.ni...
Null ppi.MCPH1 View Gene Set 0.0003105 17 0.0455 21 Protein-protein-interaction for MCPH1 www.ncbi.nlm.ni...
Null ppi.CDT1 View Gene Set 0.000308 42 0.0455 21 Protein-protein-interaction for CDT1 www.ncbi.nlm.ni...
Null ppi.NUF2 View Gene Set 0.0002925 7 0.0455 21 Protein-protein-interaction for NUF2 www.ncbi.nlm.ni...
Null ppi.MYOCD View Gene Set 0.0002781 9 0.0455 21 Protein-protein-interaction for MYOCD www.ncbi.nlm.ni...
Null ppi.KPNA6 View Gene Set 0.0003614 12 0.04588 27 Protein-protein-interaction for KPNA6 www.ncbi.nlm.ni...
Null ppi.NUP43 View Gene Set 0.0003957 6 0.04588 27 Protein-protein-interaction for NUP43 www.ncbi.nlm.ni...
Null ppi.KIAA1377 View Gene Set 0.0003822 64 0.04588 27 Protein-protein-interaction for KIAA1377 www.ncbi.nlm.ni...
Null ppi.CDC16 View Gene Set 0.0003688 14 0.04588 27 Protein-protein-interaction for CDC16 www.ncbi.nlm.ni...
Null ppi.TCEAL1 View Gene Set 0.0003888 11 0.04588 27 Protein-protein-interaction for TCEAL1 www.ncbi.nlm.ni...
Null ppi.ING3 View Gene Set 0.0004118 12 0.04625 32 Protein-protein-interaction for ING3 www.ncbi.nlm.ni...
Null ppi.ORC5L View Gene Set 0.00045 11 0.04901 33 Protein-protein-interaction for ORC5L www.ncbi.nlm.ni...
Null ppi.PPIH View Gene Set 0.0005366 6 0.04983 34 Protein-protein-interaction for PPIH www.ncbi.nlm.ni...
Null ppi.SF3B1 View Gene Set 0.0005174 31 0.04983 34 Protein-protein-interaction for SF3B1 www.ncbi.nlm.ni...
Null ppi.NUP62 View Gene Set 0.0004985 25 0.04983 34 Protein-protein-interaction for NUP62 www.ncbi.nlm.ni...
Null ppi.TAF12 View Gene Set 0.0004791 16 0.04983 34 Protein-protein-interaction for TAF12 www.ncbi.nlm.ni...
Null ppi.TOP1 View Gene Set 0.0005407 15 0.04983 34 Protein-protein-interaction for TOP1 www.ncbi.nlm.ni...
Null ppi.MDC1 View Gene Set 0.0005155 24 0.04983 34 Protein-protein-interaction for MDC1 www.ncbi.nlm.ni...
Null ppi.CBX5 View Gene Set 0.0005982 46 0.04995 40 Protein-protein-interaction for CBX5 www.ncbi.nlm.ni...
Null ppi.UIMC1 View Gene Set 0.0005603 32 0.04995 40 Protein-protein-interaction for UIMC1 www.ncbi.nlm.ni...
Null ppi.UBB View Gene Set 0.0005866 46 0.04995 40 Protein-protein-interaction for UBB www.ncbi.nlm.ni...
Null ppi.YY1 View Gene Set 0.0006116 39 0.04995 40 Protein-protein-interaction for YY1 www.ncbi.nlm.ni...
Null ppi.ATG4C View Gene Set 0.0005955 10 0.04995 40 Protein-protein-interaction for ATG4C www.ncbi.nlm.ni...

Gene Set Collection: pathwayCommons.cell-map

Arguments: refPop=all, featureType=featureNames, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null TNF alpha/NF-kB View Gene Set 0.001137 170 0.01137 1 CELL_MAP - TNF alpha/NF-kB gene set www.pathwaycomm...

Gene Set Collection: pathwayCommons.nci-nature

Arguments: refPop=all, featureType=featureNames, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null Aurora B signaling View Gene Set 0.0001029 41 0.01914 1 NCI_NATURE - Aurora B signaling gene set www.pathwaycomm...
Null BARD1 signaling events View Gene Set 0.0002358 29 0.02193 2 NCI_NATURE - BARD1 signaling events gene set www.pathwaycomm...
Null Validated targets of C-MYC transcriptional activation View Gene Set 0.0004614 80 0.02861 3 NCI_NATURE - Validated targets of C-MYC transcriptional activation gene set www.pathwaycomm...

Gene Set Collection: pathwayCommons.reactome

Arguments: refPop=all, featureType=featureNames, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null DNA Replication View Gene Set 2.31e-18 200 2.58e-15 1 REACTOME - DNA Replication gene set www.pathwaycomm...
Null Cell Cycle Mitotic View Gene Set 2.166e-16 312 1.21e-13 2 REACTOME - Cell Cycle Mitotic gene set www.pathwaycomm... Mitotic&format=...
Null Gene Expression View Gene Set 9.1e-16 381 3.388e-13 3 REACTOME - Gene Expression gene set www.pathwaycomm...
Null Mitotic M-M/G1 phases View Gene Set 1.323e-15 180 3.695e-13 4 REACTOME - Mitotic M-M/G1 phases gene set www.pathwaycomm...
Null Formation and Maturation of mRNA Transcript View Gene Set 3.282e-14 185 7.332e-12 5 REACTOME - Formation and Maturation of mRNA Transcript gene set www.pathwaycomm...
Null Processing of Capped Intron-Containing Pre-mRNA View Gene Set 4.357e-13 138 8.112e-11 6 REACTOME - Processing of Capped Intron-Containing Pre-mRNA gene set www.pathwaycomm...
Null mRNA Processing View Gene Set 5.453e-13 158 8.702e-11 7 REACTOME - mRNA Processing gene set www.pathwaycomm...
Null M Phase View Gene Set 8.453e-12 90 1.18e-09 8 REACTOME - M Phase gene set www.pathwaycomm...
Null Cell Cycle Checkpoints View Gene Set 4.368e-11 124 4.72e-09 9 REACTOME - Cell Cycle Checkpoints gene set www.pathwaycomm...
Null Mitotic Prometaphase View Gene Set 4.648e-11 86 4.72e-09 9 REACTOME - Mitotic Prometaphase gene set www.pathwaycomm...
Null Metabolism of RNA View Gene Set 4.263e-11 174 4.72e-09 9 REACTOME - Metabolism of RNA gene set www.pathwaycomm...
Null Transcription View Gene Set 1.719e-09 178 1.6e-07 12 REACTOME - Transcription gene set www.pathwaycomm...
Null mRNA Splicing - Major Pathway View Gene Set 7.072e-09 107 5.267e-07 13 REACTOME - mRNA Splicing - Major Pathway gene set www.pathwaycomm...
Null mRNA Splicing View Gene Set 7.072e-09 107 5.267e-07 13 REACTOME - mRNA Splicing gene set www.pathwaycomm...
Null G2/M Checkpoints View Gene Set 6.712e-09 43 5.267e-07 13 REACTOME - G2/M Checkpoints gene set www.pathwaycomm...
Null Transport of Mature mRNA derived from an Intron-Containing Transcript View Gene Set 1.867e-08 51 1.304e-06 16 REACTOME - Transport of Mature mRNA derived from an Intron-Containing Transcript gene set www.pathwaycomm...
Null Transport of Mature Transcript to Cytoplasm View Gene Set 4.625e-08 55 3.015e-06 17 REACTOME - Transport of Mature Transcript to Cytoplasm gene set www.pathwaycomm...
Null snRNP Assembly View Gene Set 5.129e-08 50 3.015e-06 17 REACTOME - snRNP Assembly gene set www.pathwaycomm...
Null Metabolism of non-coding RNA View Gene Set 5.129e-08 50 3.015e-06 17 REACTOME - Metabolism of non-coding RNA gene set www.pathwaycomm...
Null S Phase View Gene Set 7.987e-08 113 4.461e-06 20 REACTOME - S Phase gene set www.pathwaycomm...
Null G1/S Transition View Gene Set 8.923e-08 104 4.746e-06 21 REACTOME - G1/S Transition gene set www.pathwaycomm...
Null Synthesis of DNA View Gene Set 1.111e-07 102 5.641e-06 22 REACTOME - Synthesis of DNA gene set www.pathwaycomm...
Null Activation of ATR in response to replication stress View Gene Set 1.318e-07 37 6.399e-06 23 REACTOME - Activation of ATR in response to replication stress gene set www.pathwaycomm...
Null Transport of the SLBP Dependant Mature mRNA View Gene Set 9.956e-07 33 4.508e-05 24 REACTOME - Transport of the SLBP Dependant Mature mRNA gene set www.pathwaycomm...
Null G2/M DNA damage checkpoint View Gene Set 1.009e-06 29 4.508e-05 24 REACTOME - G2/M DNA damage checkpoint gene set www.pathwaycomm...
Null RNA Polymerase II Transcription View Gene Set 1.166e-06 101 5.007e-05 26 REACTOME - RNA Polymerase II Transcription gene set www.pathwaycomm...
Null Transport of Ribonucleoproteins into the Host Nucleus View Gene Set 2.028e-06 29 8.389e-05 27 REACTOME - Transport of Ribonucleoproteins into the Host Nucleus gene set www.pathwaycomm...
Null Transport of the SLBP independent Mature mRNA View Gene Set 2.176e-06 32 8.68e-05 28 REACTOME - Transport of the SLBP independent Mature mRNA gene set www.pathwaycomm...
Null Regulation of mitotic cell cycle View Gene Set 2.461e-06 95 9.163e-05 29 REACTOME - Regulation of mitotic cell cycle gene set www.pathwaycomm...
Null APC/C-mediated degradation of cell cycle proteins View Gene Set 2.461e-06 95 9.163e-05 29 REACTOME - APC/C-mediated degradation of cell cycle proteins gene set www.pathwaycomm...
Null Activation of APC/C and APC/C:Cdc20 mediated degradation of mitotic proteins View Gene Set 2.587e-06 86 9.322e-05 31 REACTOME - Activation of APC/C and APC/C:Cdc20 mediated degradation of mitotic proteins gene set www.pathwaycomm...
Null Chromosome Maintenance View Gene Set 3.328e-06 69 0.0001136 32 REACTOME - Chromosome Maintenance gene set www.pathwaycomm...
Null DNA Replication Pre-Initiation View Gene Set 3.458e-06 90 0.0001136 32 REACTOME - DNA Replication Pre-Initiation gene set www.pathwaycomm...
Null M/G1 Transition View Gene Set 3.458e-06 90 0.0001136 32 REACTOME - M/G1 Transition gene set www.pathwaycomm...
Null Mitotic G1-G1/S phases View Gene Set 4.622e-06 113 0.0001475 35 REACTOME - Mitotic G1-G1/S phases gene set www.pathwaycomm...
Null Transport of Mature mRNAs Derived from Intronless Transcripts View Gene Set 5.913e-06 36 0.0001835 36 REACTOME - Transport of Mature mRNAs Derived from Intronless Transcripts gene set www.pathwaycomm...
Null Interactions of Vpr with host cellular proteins View Gene Set 6.292e-06 34 0.0001899 37 REACTOME - Interactions of Vpr with host cellular proteins gene set www.pathwaycomm...
Null Late Phase of HIV Life Cycle View Gene Set 6.95e-06 92 0.0002043 38 REACTOME - Late Phase of HIV Life Cycle gene set www.pathwaycomm...
Null Phosphorylation of the APC/C View Gene Set 1e-05 26 0.0002793 39 REACTOME - Phosphorylation of the APC/C gene set www.pathwaycomm...
Null Regulation of APC/C activators between G1/S and early anaphase View Gene Set 9.978e-06 88 0.0002793 39 REACTOME - Regulation of APC/C activators between G1/S and early anaphase gene set www.pathwaycomm...
Null Activation of the pre-replicative complex View Gene Set 1.085e-05 30 0.0002953 41 REACTOME - Activation of the pre-replicative complex gene set www.pathwaycomm...
Null DNA strand elongation View Gene Set 1.11e-05 31 0.0002953 41 REACTOME - DNA strand elongation gene set www.pathwaycomm...
Null Transport of Mature mRNA Derived from an Intronless Transcript View Gene Set 1.245e-05 35 0.0003234 43 REACTOME - Transport of Mature mRNA Derived from an Intronless Transcript gene set www.pathwaycomm...
Null Export of Viral Ribonucleoproteins from Nucleus View Gene Set 1.293e-05 31 0.0003281 44 REACTOME - Export of Viral Ribonucleoproteins from Nucleus gene set www.pathwaycomm...
Null Post-Elongation Processing of the Transcript View Gene Set 1.778e-05 43 0.0004127 45 REACTOME - Post-Elongation Processing of the Transcript gene set www.pathwaycomm...
Null Cleavage of Growing Transcript in the Termination Region View Gene Set 1.778e-05 43 0.0004127 45 REACTOME - Cleavage of Growing Transcript in the Termination Region gene set www.pathwaycomm...
Null RNA Polymerase II Transcription Termination View Gene Set 1.778e-05 43 0.0004127 45 REACTOME - RNA Polymerase II Transcription Termination gene set www.pathwaycomm...
Null NEP/NS2 Interacts with the Cellular Export Machinery View Gene Set 1.811e-05 29 0.0004127 45 REACTOME - NEP/NS2 Interacts with the Cellular Export Machinery gene set www.pathwaycomm...
Null Metabolism of mRNA View Gene Set 1.79e-05 125 0.0004127 45 REACTOME - Metabolism of mRNA gene set www.pathwaycomm...
Null Vpr-mediated nuclear import of PICs View Gene Set 1.874e-05 31 0.0004187 50 REACTOME - Vpr-mediated nuclear import of PICs gene set www.pathwaycomm...
Null Removal of licensing factors from origins View Gene Set 2.08e-05 78 0.0004555 51 REACTOME - Removal of licensing factors from origins gene set www.pathwaycomm...
Null APC/C:Cdc20 mediated degradation of mitotic proteins View Gene Set 2.469e-05 77 0.0005305 52 REACTOME - APC/C:Cdc20 mediated degradation of mitotic proteins gene set www.pathwaycomm...
Null Regulation of DNA replication View Gene Set 2.559e-05 81 0.0005392 53 REACTOME - Regulation of DNA replication gene set www.pathwaycomm...
Null DNA Repair View Gene Set 2.642e-05 108 0.0005465 54 REACTOME - DNA Repair gene set www.pathwaycomm...
Null Nuclear import of Rev protein View Gene Set 3.036e-05 30 0.0006165 55 REACTOME - Nuclear import of Rev protein gene set www.pathwaycomm...
Null E2F mediated regulation of DNA replication View Gene Set 3.914e-05 28 0.0007808 56 REACTOME - E2F mediated regulation of DNA replication gene set www.pathwaycomm...
Null Cdc20:Phospho-APC/C mediated degradation of Cyclin A View Gene Set 4.329e-05 75 0.0008483 57 REACTOME - Cdc20:Phospho-APC/C mediated degradation of Cyclin A gene set www.pathwaycomm...
Null HIV Life Cycle View Gene Set 4.766e-05 103 0.0009178 58 REACTOME - HIV Life Cycle gene set www.pathwaycomm...
Null RNA Polymerase I RNA Polymerase III and Mitochondrial Transcription View Gene Set 5.33e-05 93 0.001009 59 REACTOME - RNA Polymerase I RNA Polymerase III and Mitochondrial Transcription gene set www.pathwaycomm... RNA Polymerase ... and Mitochondri...
Null Assembly of the pre-replicative complex View Gene Set 5.573e-05 75 0.001037 60 REACTOME - Assembly of the pre-replicative complex gene set www.pathwaycomm...
Null Inhibition of the proteolytic activity of APC/C required for the onset of anaphase by mitotic spindle checkpoint components View Gene Set 5.775e-05 18 0.00104 61 REACTOME - Inhibition of the proteolytic activity of APC/C required for the onset of anaphase by mitotic spindle checkpoint components gene set www.pathwaycomm...
Null Inactivation of APC/C via direct inhibition of the APC/C complex View Gene Set 5.775e-05 18 0.00104 61 REACTOME - Inactivation of APC/C via direct inhibition of the APC/C complex gene set www.pathwaycomm...
Null Switching of origins to a post-replicative state View Gene Set 6.999e-05 76 0.001222 63 REACTOME - Switching of origins to a post-replicative state gene set www.pathwaycomm...
Null Orc1 removal from chromatin View Gene Set 6.999e-05 76 0.001222 63 REACTOME - Orc1 removal from chromatin gene set www.pathwaycomm...
Null APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1 View Gene Set 7.55e-05 77 0.001297 65 REACTOME - APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1 gene set www.pathwaycomm...
Null E2F-enabled inhibition of pre-replication complex formation View Gene Set 8.095e-05 10 0.00137 66 REACTOME - E2F-enabled inhibition of pre-replication complex formation gene set www.pathwaycomm...
Null Regulation of Glucokinase by Glucokinase Regulatory Protein View Gene Set 0.0001096 29 0.001827 67 REACTOME - Regulation of Glucokinase by Glucokinase Regulatory Protein gene set www.pathwaycomm...
Null Mitotic Spindle Checkpoint View Gene Set 0.0001152 19 0.001892 68 REACTOME - Mitotic Spindle Checkpoint gene set www.pathwaycomm...
Null Interactions of Rev with host cellular proteins View Gene Set 0.0001268 33 0.002024 69 REACTOME - Interactions of Rev with host cellular proteins gene set www.pathwaycomm...
Null Deadenylation-dependent mRNA decay View Gene Set 0.0001255 46 0.002024 69 REACTOME - Deadenylation-dependent mRNA decay gene set www.pathwaycomm...
Null HIV Infection View Gene Set 0.0002058 194 0.003177 71 REACTOME - HIV Infection gene set www.pathwaycomm...
Null Autodegradation of Cdh1 by Cdh1:APC/C View Gene Set 0.0002072 67 0.003177 71 REACTOME - Autodegradation of Cdh1 by Cdh1:APC/C gene set www.pathwaycomm...
Null APC/C:Cdc20 mediated degradation of Securin View Gene Set 0.0002076 72 0.003177 71 REACTOME - APC/C:Cdc20 mediated degradation of Securin gene set www.pathwaycomm...
Null Pyrimidine metabolism View Gene Set 0.0002231 23 0.003368 74 REACTOME - Pyrimidine metabolism gene set www.pathwaycomm...
Null Rev-mediated nuclear export of HIV-1 RNA View Gene Set 0.0002384 32 0.003551 75 REACTOME - Rev-mediated nuclear export of HIV-1 RNA gene set www.pathwaycomm...
Null CDT1 association with the CDC6:ORC:origin complex View Gene Set 0.0002638 66 0.003877 76 REACTOME - CDT1 association with the CDC6:ORC:origin complex gene set www.pathwaycomm...
Null mRNA Splicing - Minor Pathway View Gene Set 0.0002753 42 0.003993 77 REACTOME - mRNA Splicing - Minor Pathway gene set www.pathwaycomm...
Null Post-Elongation Processing of Intron-Containing pre-mRNA View Gene Set 0.000395 34 0.005585 78 REACTOME - Post-Elongation Processing of Intron-Containing pre-mRNA gene set www.pathwaycomm...
Null mRNA 3'-end processing View Gene Set 0.000395 34 0.005585 78 REACTOME - mRNA 3'-end processing gene set www.pathwaycomm...
Null tRNA Aminoacylation View Gene Set 0.0005441 42 0.007597 80 REACTOME - tRNA Aminoacylation gene set www.pathwaycomm...
Null Extension of Telomeres View Gene Set 0.0006336 28 0.008738 81 REACTOME - Extension of Telomeres gene set www.pathwaycomm...
Null Generic Transcription Pathway View Gene Set 0.0007285 35 0.009924 82 REACTOME - Generic Transcription Pathway gene set www.pathwaycomm...
Null Telomere Maintenance View Gene Set 0.0007456 49 0.01003 83 REACTOME - Telomere Maintenance gene set www.pathwaycomm...
Null Respiratory electron transport ATP synthesis by chemiosmotic coupling and heat production by uncoupling proteins. View Gene Set 0.000768 91 0.01021 84 REACTOME - Respiratory electron transport ATP synthesis by chemiosmotic coupling and heat production by uncoupling proteins. gene set www.pathwaycomm... ATP synthesis b... and heat produc...
Null Conversion from APC/C:Cdc20 to APC/C:Cdh1 in late anaphase View Gene Set 0.0008098 16 0.01064 85 REACTOME - Conversion from APC/C:Cdc20 to APC/C:Cdh1 in late anaphase gene set www.pathwaycomm...
Null Glucose transport View Gene Set 0.0008574 38 0.01114 86 REACTOME - Glucose transport gene set www.pathwaycomm...
Null Pyrimidine biosynthesis View Gene Set 0.0008698 6 0.01117 87 REACTOME - Pyrimidine biosynthesis gene set www.pathwaycomm...
Null Assembly of the ORC complex at the origin of replication View Gene Set 0.0009466 6 0.01198 88 REACTOME - Assembly of the ORC complex at the origin of replication gene set www.pathwaycomm...
Null Unwinding of DNA View Gene Set 0.0009543 11 0.01198 88 REACTOME - Unwinding of DNA gene set www.pathwaycomm...
Null mRNA Decay by 5' to 3' Exoribonuclease View Gene Set 0.001065 13 0.01321 90 REACTOME - mRNA Decay by 5' to 3' Exoribonuclease gene set www.pathwaycomm...
Null Telomere C-strand (Lagging Strand) Synthesis View Gene Set 0.00135 22 0.01656 91 REACTOME - Telomere C-strand (Lagging Strand) Synthesis gene set www.pathwaycomm...
Null Lagging Strand Synthesis View Gene Set 0.001364 20 0.01656 91 REACTOME - Lagging Strand Synthesis gene set www.pathwaycomm...
Null APC-Cdc20 mediated degradation of Nek2A View Gene Set 0.00142 23 0.01706 93 REACTOME - APC-Cdc20 mediated degradation of Nek2A gene set www.pathwaycomm...
Null Global Genomic NER (GG-NER) View Gene Set 0.001545 35 0.01835 94 REACTOME - Global Genomic NER (GG-NER) gene set www.pathwaycomm...
Null Cyclin A:Cdk2-associated events at S phase entry View Gene Set 0.001678 62 0.01973 95 REACTOME - Cyclin A:Cdk2-associated events at S phase entry gene set www.pathwaycomm...
Null Repair synthesis for gap-filling by DNA polymerase in TC-NER View Gene Set 0.001895 15 0.02182 96 REACTOME - Repair synthesis for gap-filling by DNA polymerase in TC-NER gene set www.pathwaycomm...
Null Repair synthesis of patch ~27-30 bases long by DNA polymerase View Gene Set 0.001895 15 0.02182 96 REACTOME - Repair synthesis of patch ~27-30 bases long by DNA polymerase gene set www.pathwaycomm...
Null Deposition of New CENPA-containing Nucleosomes at the Centromere View Gene Set 0.001977 35 0.02208 98 REACTOME - Deposition of New CENPA-containing Nucleosomes at the Centromere gene set www.pathwaycomm...
Null Nucleosome assembly View Gene Set 0.001977 35 0.02208 98 REACTOME - Nucleosome assembly gene set www.pathwaycomm...
Null Meiotic Recombination View Gene Set 0.001947 42 0.02208 98 REACTOME - Meiotic Recombination gene set www.pathwaycomm...
Null Phosphorylation of Emi1 View Gene Set 0.002002 12 0.02214 101 REACTOME - Phosphorylation of Emi1 gene set www.pathwaycomm...
Null RNA Polymerase I Transcription Initiation View Gene Set 0.002069 25 0.02265 102 REACTOME - RNA Polymerase I Transcription Initiation gene set www.pathwaycomm...
Null RNA Polymerase II Pre-transcription Events View Gene Set 0.002146 58 0.02327 103 REACTOME - RNA Polymerase II Pre-transcription Events gene set www.pathwaycomm...
Null CDC6 association with the ORC:origin complex View Gene Set 0.002167 11 0.02328 104 REACTOME - CDC6 association with the ORC:origin complex gene set www.pathwaycomm...
Null Ubiquitin Mediated Degradation of Phosphorylated Cdc25A View Gene Set 0.00224 61 0.02382 105 REACTOME - Ubiquitin Mediated Degradation of Phosphorylated Cdc25A gene set www.pathwaycomm...
Null Endosomal Sorting Complex Required For Transport (ESCRT) View Gene Set 0.002272 28 0.02394 106 REACTOME - Endosomal Sorting Complex Required For Transport (ESCRT) gene set www.pathwaycomm...
Null Transcription of the HIV genome View Gene Set 0.002405 60 0.02464 107 REACTOME - Transcription of the HIV genome gene set www.pathwaycomm...
Null Nucleotide Excision Repair View Gene Set 0.002403 51 0.02464 107 REACTOME - Nucleotide Excision Repair gene set www.pathwaycomm...
Null Cyclin E associated events during G1/S transition View Gene Set 0.002383 64 0.02464 107 REACTOME - Cyclin E associated events during G1/S transition gene set www.pathwaycomm...
Null Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide LLO) and transfer to a nascent protein View Gene Set 0.002484 30 0.02523 110 REACTOME - Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide LLO) and transfer to a nascent protein gene set www.pathwaycomm... LLO) and transf...
Null Post-Elongation Processing of Intronless pre-mRNA View Gene Set 0.002668 23 0.02637 111 REACTOME - Post-Elongation Processing of Intronless pre-mRNA gene set www.pathwaycomm...
Null Processing of Capped Intronless Pre-mRNA View Gene Set 0.002668 23 0.02637 111 REACTOME - Processing of Capped Intronless Pre-mRNA gene set www.pathwaycomm...
Null Regulation of mRNA Stability by Proteins that Bind AU-rich Elements View Gene Set 0.002661 95 0.02637 111 REACTOME - Regulation of mRNA Stability by Proteins that Bind AU-rich Elements gene set www.pathwaycomm...
Null Gap-filling DNA repair synthesis and ligation in TC-NER View Gene Set 0.002951 16 0.02866 114 REACTOME - Gap-filling DNA repair synthesis and ligation in TC-NER gene set www.pathwaycomm...
Null Gap-filling DNA repair synthesis and ligation in GG-NER View Gene Set 0.002951 16 0.02866 114 REACTOME - Gap-filling DNA repair synthesis and ligation in GG-NER gene set www.pathwaycomm...
Null Mitotic G2-G2/M phases View Gene Set 0.003238 98 0.03118 116 REACTOME - Mitotic G2-G2/M phases gene set www.pathwaycomm...
Null RNA Polymerase III Transcription View Gene Set 0.003328 34 0.03124 117 REACTOME - RNA Polymerase III Transcription gene set www.pathwaycomm...
Null RNA Polymerase III Abortive And Retractive Initiation View Gene Set 0.003328 34 0.03124 117 REACTOME - RNA Polymerase III Abortive And Retractive Initiation gene set www.pathwaycomm...
Null G2/M Transition View Gene Set 0.003273 96 0.03124 117 REACTOME - G2/M Transition gene set www.pathwaycomm...
Null SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs View Gene Set 0.003659 11 0.03193 120 REACTOME - SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs gene set www.pathwaycomm...
Null HIV-1 Transcription Initiation View Gene Set 0.003659 40 0.03193 120 REACTOME - HIV-1 Transcription Initiation gene set www.pathwaycomm...
Null RNA Polymerase II HIV-1 Promoter Escape View Gene Set 0.003659 40 0.03193 120 REACTOME - RNA Polymerase II HIV-1 Promoter Escape gene set www.pathwaycomm...
Null RNA Polymerase II Promoter Escape View Gene Set 0.003659 40 0.03193 120 REACTOME - RNA Polymerase II Promoter Escape gene set www.pathwaycomm...
Null RNA Polymerase II Transcription Initiation And Promoter Clearance View Gene Set 0.003659 40 0.03193 120 REACTOME - RNA Polymerase II Transcription Initiation And Promoter Clearance gene set www.pathwaycomm...
Null RNA Polymerase II Transcription Initiation View Gene Set 0.003659 40 0.03193 120 REACTOME - RNA Polymerase II Transcription Initiation gene set www.pathwaycomm...
Null RNA Polymerase II Transcription Pre-Initiation And Promoter Opening View Gene Set 0.003659 40 0.03193 120 REACTOME - RNA Polymerase II Transcription Pre-Initiation And Promoter Opening gene set www.pathwaycomm...
Null Respiratory electron transport View Gene Set 0.00357 76 0.03193 120 REACTOME - Respiratory electron transport gene set www.pathwaycomm...
Null Destabilization of mRNA by AUF1 (hnRNP D0) View Gene Set 0.003521 63 0.03193 120 REACTOME - Destabilization of mRNA by AUF1 (hnRNP D0) gene set www.pathwaycomm...
Null APC/C:Cdc20 mediated degradation of Cyclin B View Gene Set 0.004082 22 0.03534 129 REACTOME - APC/C:Cdc20 mediated degradation of Cyclin B gene set www.pathwaycomm...
Null G1/S-Specific Transcription View Gene Set 0.00431 16 0.03703 130 REACTOME - G1/S-Specific Transcription gene set www.pathwaycomm...
Null RNA Polymerase III Transcription Termination View Gene Set 0.0044 17 0.03751 131 REACTOME - RNA Polymerase III Transcription Termination gene set www.pathwaycomm...
Null p53-Independent G1/S DNA damage checkpoint View Gene Set 0.004468 62 0.03752 132 REACTOME - p53-Independent G1/S DNA damage checkpoint gene set www.pathwaycomm...
Null p53-Independent DNA Damage Response View Gene Set 0.004468 62 0.03752 132 REACTOME - p53-Independent DNA Damage Response gene set www.pathwaycomm...
Null Hexose transport View Gene Set 0.004649 40 0.03875 134 REACTOME - Hexose transport gene set www.pathwaycomm...
Null SCF(Skp2)-mediated degradation of p27/p21 View Gene Set 0.005708 52 0.04723 135 REACTOME - SCF(Skp2)-mediated degradation of p27/p21 gene set www.pathwaycomm...
Null MicroRNA (miRNA) Biogenesis View Gene Set 0.005903 22 0.04813 136 REACTOME - MicroRNA (miRNA) Biogenesis gene set www.pathwaycomm...
Null Regulatory RNA pathways View Gene Set 0.005903 22 0.04813 136 REACTOME - Regulatory RNA pathways gene set www.pathwaycomm...
Null RNA Polymerase I Promoter Clearance View Gene Set 0.005982 55 0.04842 138 REACTOME - RNA Polymerase I Promoter Clearance gene set www.pathwaycomm...

Gene Set Collection: miranda.targets

Arguments: refPop=all, featureType=featureNames, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null hsa-miR-590-3p View Gene Set 3.2e-34 3575 2.167e-31 1 microRNA targets for hsa-miR-590-3p from miranda.targets www.mirbase.org...
Null hsa-miR-548n View Gene Set 6.766e-29 3830 2.29e-26 2 microRNA targets for hsa-miR-548n from miranda.targets www.mirbase.org...
Null hsa-miR-561 View Gene Set 3.1e-25 2925 6.995e-23 3 microRNA targets for hsa-miR-561 from miranda.targets www.mirbase.org...
Null hsa-miR-548f View Gene Set 2.573e-23 2082 4.355e-21 4 microRNA targets for hsa-miR-548f from miranda.targets www.mirbase.org...
Null hsa-miR-548c-3p View Gene Set 4.783e-23 3130 5.397e-21 5 microRNA targets for hsa-miR-548c-3p from miranda.targets www.mirbase.org...
Null hsa-miR-548e View Gene Set 4.433e-23 2325 5.397e-21 5 microRNA targets for hsa-miR-548e from miranda.targets www.mirbase.org...
Null hsa-miR-548b-5p View Gene Set 7.453e-23 3175 7.208e-21 7 microRNA targets for hsa-miR-548b-5p from miranda.targets www.mirbase.org...
Null hsa-miR-548d-5p View Gene Set 6.255e-22 3270 5.293e-20 8 microRNA targets for hsa-miR-548d-5p from miranda.targets www.mirbase.org...
Null hsa-miR-548a-5p View Gene Set 1.283e-21 2983 9.65e-20 9 microRNA targets for hsa-miR-548a-5p from miranda.targets www.mirbase.org...
Null hsa-miR-548l View Gene Set 3.13e-21 2599 2.119e-19 10 microRNA targets for hsa-miR-548l from miranda.targets www.mirbase.org...
Null hsa-miR-548j View Gene Set 6.558e-21 2652 4.036e-19 11 microRNA targets for hsa-miR-548j from miranda.targets www.mirbase.org...
Null hsa-miR-548c-5p View Gene Set 6.036e-20 2909 3.405e-18 12 microRNA targets for hsa-miR-548c-5p from miranda.targets www.mirbase.org...
Null hsa-miR-548a-3p View Gene Set 6.761e-20 2420 3.521e-18 13 microRNA targets for hsa-miR-548a-3p from miranda.targets www.mirbase.org...
Null hsa-miR-548i View Gene Set 8.047e-20 2860 3.891e-18 14 microRNA targets for hsa-miR-548i from miranda.targets www.mirbase.org...
Null hsa-miR-559 View Gene Set 3.655e-19 2900 1.65e-17 15 microRNA targets for hsa-miR-559 from miranda.targets www.mirbase.org...
Null hsa-miR-450b-5p View Gene Set 6.78e-19 2243 2.869e-17 16 microRNA targets for hsa-miR-450b-5p from miranda.targets www.mirbase.org...
Null hsa-miR-548o View Gene Set 8.863e-19 2216 3.53e-17 17 microRNA targets for hsa-miR-548o from miranda.targets www.mirbase.org...
Null hsa-miR-548g View Gene Set 6.373e-18 2114 2.271e-16 18 microRNA targets for hsa-miR-548g from miranda.targets www.mirbase.org...
Null hsa-miR-548h View Gene Set 6.162e-18 2539 2.271e-16 18 microRNA targets for hsa-miR-548h from miranda.targets www.mirbase.org...
Null hsa-miR-1323 View Gene Set 1.124e-17 2071 3.804e-16 20 microRNA targets for hsa-miR-1323 from miranda.targets www.mirbase.org...
Null hsa-miR-513a-3p View Gene Set 3.124e-17 2711 1.007e-15 21 microRNA targets for hsa-miR-513a-3p from miranda.targets www.mirbase.org...
Null hsa-miR-607 View Gene Set 1.315e-16 2322 4.045e-15 22 microRNA targets for hsa-miR-607 from miranda.targets www.mirbase.org...
Null hsa-miR-142-5p View Gene Set 4.833e-16 2312 1.423e-14 23 microRNA targets for hsa-miR-142-5p from miranda.targets www.mirbase.org...
Null hsa-miR-340 View Gene Set 3.86e-15 2504 1.089e-13 24 microRNA targets for hsa-miR-340 from miranda.targets www.mirbase.org...
Null hsa-miR-26a View Gene Set 4.52e-15 1414 1.224e-13 25 microRNA targets for hsa-miR-26a from miranda.targets www.mirbase.org...
Null hsa-miR-586 View Gene Set 5.631e-15 2421 1.466e-13 26 microRNA targets for hsa-miR-586 from miranda.targets www.mirbase.org...
Null hsa-miR-524-5p View Gene Set 7.194e-15 2574 1.804e-13 27 microRNA targets for hsa-miR-524-5p from miranda.targets www.mirbase.org...
Null hsa-miR-548m View Gene Set 1.244e-14 2295 3.008e-13 28 microRNA targets for hsa-miR-548m from miranda.targets www.mirbase.org...
Null hsa-miR-186 View Gene Set 1.304e-14 2681 3.044e-13 29 microRNA targets for hsa-miR-186 from miranda.targets www.mirbase.org...
Null hsa-miR-548k View Gene Set 3.591e-14 1874 8.104e-13 30 microRNA targets for hsa-miR-548k from miranda.targets www.mirbase.org...
Null hsa-miR-944 View Gene Set 3.838e-14 2438 8.382e-13 31 microRNA targets for hsa-miR-944 from miranda.targets www.mirbase.org...
Null hsa-miR-26b View Gene Set 4.374e-14 1511 9.254e-13 32 microRNA targets for hsa-miR-26b from miranda.targets www.mirbase.org...
Null hsa-miR-301b View Gene Set 7.27e-14 2090 1.492e-12 33 microRNA targets for hsa-miR-301b from miranda.targets www.mirbase.org...
Null hsa-miR-655 View Gene Set 1.068e-13 1858 2.126e-12 34 microRNA targets for hsa-miR-655 from miranda.targets www.mirbase.org...
Null hsa-miR-577 View Gene Set 1.723e-13 2745 3.333e-12 35 microRNA targets for hsa-miR-577 from miranda.targets www.mirbase.org...
Null hsa-miR-570 View Gene Set 2.567e-13 3124 4.828e-12 36 microRNA targets for hsa-miR-570 from miranda.targets www.mirbase.org...
Null hsa-miR-548p View Gene Set 2.23e-12 2743 4.081e-11 37 microRNA targets for hsa-miR-548p from miranda.targets www.mirbase.org...
Null hsa-miR-520d-5p View Gene Set 3.355e-12 2061 5.977e-11 38 microRNA targets for hsa-miR-520d-5p from miranda.targets www.mirbase.org...
Null hsa-miR-568 View Gene Set 4.931e-12 2065 8.56e-11 39 microRNA targets for hsa-miR-568 from miranda.targets www.mirbase.org...
Null hsa-miR-582-5p View Gene Set 5.584e-12 1971 9.452e-11 40 microRNA targets for hsa-miR-582-5p from miranda.targets www.mirbase.org...
Null hsa-miR-580 View Gene Set 1.035e-11 2207 1.71e-10 41 microRNA targets for hsa-miR-580 from miranda.targets www.mirbase.org...
Null hsa-miR-301a View Gene Set 1.286e-11 2114 2.073e-10 42 microRNA targets for hsa-miR-301a from miranda.targets www.mirbase.org...
Null hsa-miR-374a View Gene Set 1.721e-11 1933 2.71e-10 43 microRNA targets for hsa-miR-374a from miranda.targets www.mirbase.org...
Null hsa-miR-452 View Gene Set 1.957e-11 1919 3.012e-10 44 microRNA targets for hsa-miR-452 from miranda.targets www.mirbase.org...
Null hsa-miR-656 View Gene Set 2.546e-11 1774 3.831e-10 45 microRNA targets for hsa-miR-656 from miranda.targets www.mirbase.org...
Null hsa-miR-543 View Gene Set 5.669e-11 1457 8.344e-10 46 microRNA targets for hsa-miR-543 from miranda.targets www.mirbase.org...
Null hsa-miR-1297 View Gene Set 7.045e-11 1019 1.015e-09 47 microRNA targets for hsa-miR-1297 from miranda.targets www.mirbase.org...
Null hsa-miR-641 View Gene Set 1.458e-10 2384 2.056e-09 48 microRNA targets for hsa-miR-641 from miranda.targets www.mirbase.org...
Null hsa-miR-1283 View Gene Set 1.676e-10 1960 2.315e-09 49 microRNA targets for hsa-miR-1283 from miranda.targets www.mirbase.org...
Null hsa-miR-579 View Gene Set 2.453e-10 1840 3.322e-09 50 microRNA targets for hsa-miR-579 from miranda.targets www.mirbase.org...
Null hsa-miR-491-3p View Gene Set 2.7e-10 1136 3.585e-09 51 microRNA targets for hsa-miR-491-3p from miranda.targets www.mirbase.org...
Null hsa-miR-429 View Gene Set 3.391e-10 1921 4.415e-09 52 microRNA targets for hsa-miR-429 from miranda.targets www.mirbase.org...
Null hsa-miR-374b View Gene Set 5.584e-10 1802 7.132e-09 53 microRNA targets for hsa-miR-374b from miranda.targets www.mirbase.org...
Null hsa-miR-548d-3p View Gene Set 8.119e-10 2210 1.018e-08 54 microRNA targets for hsa-miR-548d-3p from miranda.targets www.mirbase.org...
Null hsa-miR-144 View Gene Set 1.026e-09 1767 1.262e-08 55 microRNA targets for hsa-miR-144 from miranda.targets www.mirbase.org...
Null hsa-miR-633 View Gene Set 1.539e-09 1452 1.861e-08 56 microRNA targets for hsa-miR-633 from miranda.targets www.mirbase.org...
Null hsa-miR-544 View Gene Set 1.867e-09 2072 2.218e-08 57 microRNA targets for hsa-miR-544 from miranda.targets www.mirbase.org...
Null hsa-miR-361-5p View Gene Set 2.722e-09 1236 3.177e-08 58 microRNA targets for hsa-miR-361-5p from miranda.targets www.mirbase.org...
Null hsa-miR-369-3p View Gene Set 4.695e-09 1454 5.376e-08 59 microRNA targets for hsa-miR-369-3p from miranda.targets www.mirbase.org...
Null hsa-miR-802 View Gene Set 4.765e-09 1859 5.376e-08 59 microRNA targets for hsa-miR-802 from miranda.targets www.mirbase.org...
Null hsa-miR-1244 View Gene Set 5.042e-09 2675 5.596e-08 61 microRNA targets for hsa-miR-1244 from miranda.targets www.mirbase.org...
Null hsa-miR-200b View Gene Set 8.044e-09 1789 8.784e-08 62 microRNA targets for hsa-miR-200b from miranda.targets www.mirbase.org...
Null hsa-miR-338-5p View Gene Set 8.662e-09 1707 9.308e-08 63 microRNA targets for hsa-miR-338-5p from miranda.targets www.mirbase.org...
Null hsa-miR-203 View Gene Set 1.081e-08 2295 1.144e-07 64 microRNA targets for hsa-miR-203 from miranda.targets www.mirbase.org...
Null hsa-miR-181d View Gene Set 1.193e-08 2212 1.229e-07 65 microRNA targets for hsa-miR-181d from miranda.targets www.mirbase.org...
Null hsa-miR-300 View Gene Set 1.198e-08 1644 1.229e-07 65 microRNA targets for hsa-miR-300 from miranda.targets www.mirbase.org...
Null hsa-miR-30e View Gene Set 1.452e-08 1792 1.468e-07 67 microRNA targets for hsa-miR-30e from miranda.targets www.mirbase.org...
Null hsa-miR-1252 View Gene Set 1.503e-08 3125 1.497e-07 68 microRNA targets for hsa-miR-1252 from miranda.targets www.mirbase.org...
Null hsa-miR-494 View Gene Set 1.632e-08 1886 1.601e-07 69 microRNA targets for hsa-miR-494 from miranda.targets www.mirbase.org...
Null hsa-miR-200c View Gene Set 1.735e-08 1794 1.678e-07 70 microRNA targets for hsa-miR-200c from miranda.targets www.mirbase.org...
Null hsa-miR-34b View Gene Set 1.792e-08 1180 1.7e-07 71 microRNA targets for hsa-miR-34b from miranda.targets www.mirbase.org...
Null hsa-miR-643 View Gene Set 1.808e-08 989 1.7e-07 71 microRNA targets for hsa-miR-643 from miranda.targets www.mirbase.org...
Null hsa-miR-1305 View Gene Set 1.928e-08 1619 1.788e-07 73 microRNA targets for hsa-miR-1305 from miranda.targets www.mirbase.org...
Null hsa-miR-500 View Gene Set 2.196e-08 1378 2.009e-07 74 microRNA targets for hsa-miR-500 from miranda.targets www.mirbase.org...
Null hsa-miR-302b View Gene Set 2.97e-08 2091 2.681e-07 75 microRNA targets for hsa-miR-302b from miranda.targets www.mirbase.org...
Null hsa-miR-1278 View Gene Set 3.303e-08 1219 2.943e-07 76 microRNA targets for hsa-miR-1278 from miranda.targets www.mirbase.org...
Null hsa-miR-454 View Gene Set 4.29e-08 1949 3.772e-07 77 microRNA targets for hsa-miR-454 from miranda.targets www.mirbase.org...
Null hsa-miR-181c View Gene Set 4.989e-08 1844 4.33e-07 78 microRNA targets for hsa-miR-181c from miranda.targets www.mirbase.org...
Null hsa-miR-888 View Gene Set 5.117e-08 1379 4.385e-07 79 microRNA targets for hsa-miR-888 from miranda.targets www.mirbase.org...
Null hsa-miR-606 View Gene Set 5.221e-08 1040 4.418e-07 80 microRNA targets for hsa-miR-606 from miranda.targets www.mirbase.org...
Null hsa-miR-20a View Gene Set 5.995e-08 2324 5.011e-07 81 microRNA targets for hsa-miR-20a from miranda.targets www.mirbase.org...
Null hsa-miR-302d View Gene Set 6.322e-08 2056 5.22e-07 82 microRNA targets for hsa-miR-302d from miranda.targets www.mirbase.org...
Null hsa-miR-190 View Gene Set 6.403e-08 1773 5.222e-07 83 microRNA targets for hsa-miR-190 from miranda.targets www.mirbase.org...
Null hsa-miR-522 View Gene Set 6.718e-08 1877 5.415e-07 84 microRNA targets for hsa-miR-522 from miranda.targets www.mirbase.org...
Null hsa-miR-664 View Gene Set 7.478e-08 2111 5.956e-07 85 microRNA targets for hsa-miR-664 from miranda.targets www.mirbase.org...
Null hsa-miR-30d View Gene Set 9.055e-08 1500 7.128e-07 86 microRNA targets for hsa-miR-30d from miranda.targets www.mirbase.org...
Null hsa-miR-217 View Gene Set 1.083e-07 1316 8.427e-07 87 microRNA targets for hsa-miR-217 from miranda.targets www.mirbase.org...
Null hsa-miR-576-5p View Gene Set 1.133e-07 1494 8.719e-07 88 microRNA targets for hsa-miR-576-5p from miranda.targets www.mirbase.org...
Null hsa-miR-768-3p View Gene Set 1.485e-07 2025 1.13e-06 89 microRNA targets for hsa-miR-768-3p from miranda.targets www.mirbase.org...
Null hsa-miR-1259 View Gene Set 1.504e-07 1309 1.131e-06 90 microRNA targets for hsa-miR-1259 from miranda.targets www.mirbase.org...
Null hsa-miR-101 View Gene Set 1.562e-07 1272 1.139e-06 91 microRNA targets for hsa-miR-101 from miranda.targets www.mirbase.org...
Null hsa-miR-30a View Gene Set 1.541e-07 1611 1.139e-06 91 microRNA targets for hsa-miR-30a from miranda.targets www.mirbase.org...
Null hsa-miR-495 View Gene Set 1.564e-07 1793 1.139e-06 91 microRNA targets for hsa-miR-495 from miranda.targets www.mirbase.org...
Null hsa-miR-302c View Gene Set 2.028e-07 2046 1.461e-06 94 microRNA targets for hsa-miR-302c from miranda.targets www.mirbase.org...
Null hsa-miR-380 View Gene Set 3.238e-07 1449 2.308e-06 95 microRNA targets for hsa-miR-380 from miranda.targets www.mirbase.org...
Null hsa-miR-381 View Gene Set 3.537e-07 1638 2.495e-06 96 microRNA targets for hsa-miR-381 from miranda.targets www.mirbase.org...
Null hsa-miR-30c View Gene Set 4.827e-07 1792 3.369e-06 97 microRNA targets for hsa-miR-30c from miranda.targets www.mirbase.org...
Null hsa-miR-223 View Gene Set 1.387e-06 1344 9.58e-06 98 microRNA targets for hsa-miR-223 from miranda.targets www.mirbase.org...
Null hsa-miR-181a View Gene Set 1.631e-06 1946 1.115e-05 99 microRNA targets for hsa-miR-181a from miranda.targets www.mirbase.org...
Null hsa-miR-105 View Gene Set 1.705e-06 1644 1.154e-05 100 microRNA targets for hsa-miR-105 from miranda.targets www.mirbase.org...
Null hsa-miR-499-5p View Gene Set 1.814e-06 1309 1.198e-05 101 microRNA targets for hsa-miR-499-5p from miranda.targets www.mirbase.org...
Null hsa-miR-515-5p View Gene Set 1.793e-06 1821 1.198e-05 101 microRNA targets for hsa-miR-515-5p from miranda.targets www.mirbase.org...
Null hsa-miR-545 View Gene Set 1.823e-06 2246 1.198e-05 101 microRNA targets for hsa-miR-545 from miranda.targets www.mirbase.org...
Null hsa-miR-1284 View Gene Set 2.118e-06 1108 1.379e-05 104 microRNA targets for hsa-miR-1284 from miranda.targets www.mirbase.org...
Null hsa-miR-21 View Gene Set 2.244e-06 1053 1.447e-05 105 microRNA targets for hsa-miR-21 from miranda.targets www.mirbase.org...
Null hsa-miR-141 View Gene Set 2.336e-06 1773 1.492e-05 106 microRNA targets for hsa-miR-141 from miranda.targets www.mirbase.org...
Null hsa-miR-323-3p View Gene Set 2.371e-06 937 1.5e-05 107 microRNA targets for hsa-miR-323-3p from miranda.targets www.mirbase.org...
Null hsa-miR-556-5p View Gene Set 2.47e-06 1236 1.548e-05 108 microRNA targets for hsa-miR-556-5p from miranda.targets www.mirbase.org...
Null hsa-miR-372 View Gene Set 2.508e-06 1832 1.558e-05 109 microRNA targets for hsa-miR-372 from miranda.targets www.mirbase.org...
Null hsa-miR-20b View Gene Set 2.572e-06 2122 1.583e-05 110 microRNA targets for hsa-miR-20b from miranda.targets www.mirbase.org...
Null hsa-miR-651 View Gene Set 2.685e-06 1234 1.637e-05 111 microRNA targets for hsa-miR-651 from miranda.targets www.mirbase.org...
Null hsa-miR-618 View Gene Set 2.924e-06 1083 1.767e-05 112 microRNA targets for hsa-miR-618 from miranda.targets www.mirbase.org...
Null hsa-miR-19a View Gene Set 4.077e-06 2189 2.443e-05 113 microRNA targets for hsa-miR-19a from miranda.targets www.mirbase.org...
Null hsa-miR-194 View Gene Set 4.167e-06 1144 2.475e-05 114 microRNA targets for hsa-miR-194 from miranda.targets www.mirbase.org...
Null hsa-miR-376c View Gene Set 4.741e-06 1429 2.791e-05 115 microRNA targets for hsa-miR-376c from miranda.targets www.mirbase.org...
Null hsa-miR-219-2-3p View Gene Set 5.189e-06 1131 3.029e-05 116 microRNA targets for hsa-miR-219-2-3p from miranda.targets www.mirbase.org...
Null hsa-miR-448 View Gene Set 5.54e-06 1660 3.178e-05 117 microRNA targets for hsa-miR-448 from miranda.targets www.mirbase.org...
Null hsa-miR-548b-3p View Gene Set 5.496e-06 1349 3.178e-05 117 microRNA targets for hsa-miR-548b-3p from miranda.targets www.mirbase.org...
Null hsa-miR-505 View Gene Set 5.662e-06 1120 3.221e-05 119 microRNA targets for hsa-miR-505 from miranda.targets www.mirbase.org...
Null hsa-miR-410 View Gene Set 5.946e-06 1101 3.355e-05 120 microRNA targets for hsa-miR-410 from miranda.targets www.mirbase.org...
Null hsa-miR-496 View Gene Set 6.373e-06 1044 3.566e-05 121 microRNA targets for hsa-miR-496 from miranda.targets www.mirbase.org...
Null hsa-miR-653 View Gene Set 6.484e-06 1411 3.598e-05 122 microRNA targets for hsa-miR-653 from miranda.targets www.mirbase.org...
Null hsa-miR-508-3p View Gene Set 6.805e-06 1088 3.746e-05 123 microRNA targets for hsa-miR-508-3p from miranda.targets www.mirbase.org...
Null hsa-miR-30b View Gene Set 7.124e-06 1695 3.889e-05 124 microRNA targets for hsa-miR-30b from miranda.targets www.mirbase.org...
Null hsa-miR-181b View Gene Set 7.42e-06 2118 4.019e-05 125 microRNA targets for hsa-miR-181b from miranda.targets www.mirbase.org...
Null hsa-miR-382 View Gene Set 9.555e-06 1641 5.134e-05 126 microRNA targets for hsa-miR-382 from miranda.targets www.mirbase.org...
Null hsa-miR-582-3p View Gene Set 9.96e-06 1217 5.31e-05 127 microRNA targets for hsa-miR-582-3p from miranda.targets www.mirbase.org...
Null hsa-miR-519c-3p View Gene Set 1.067e-05 2011 5.646e-05 128 microRNA targets for hsa-miR-519c-3p from miranda.targets www.mirbase.org...
Null hsa-miR-513b View Gene Set 1.123e-05 1603 5.895e-05 129 microRNA targets for hsa-miR-513b from miranda.targets www.mirbase.org...
Null hsa-miR-23b View Gene Set 1.144e-05 1858 5.957e-05 130 microRNA targets for hsa-miR-23b from miranda.targets www.mirbase.org...
Null hsa-miR-624 View Gene Set 1.198e-05 1486 6.191e-05 131 microRNA targets for hsa-miR-624 from miranda.targets www.mirbase.org...
Null hsa-miR-569 View Gene Set 1.259e-05 1013 6.459e-05 132 microRNA targets for hsa-miR-569 from miranda.targets www.mirbase.org...
Null hsa-miR-19b View Gene Set 1.285e-05 2017 6.541e-05 133 microRNA targets for hsa-miR-19b from miranda.targets www.mirbase.org...
Null hsa-miR-23a View Gene Set 1.514e-05 1861 7.648e-05 134 microRNA targets for hsa-miR-23a from miranda.targets www.mirbase.org...
Null hsa-miR-106a View Gene Set 1.768e-05 2173 8.702e-05 135 microRNA targets for hsa-miR-106a from miranda.targets www.mirbase.org...
Null hsa-miR-17 View Gene Set 1.768e-05 2173 8.702e-05 135 microRNA targets for hsa-miR-17 from miranda.targets www.mirbase.org...
Null hsa-miR-302a View Gene Set 1.774e-05 2054 8.702e-05 135 microRNA targets for hsa-miR-302a from miranda.targets www.mirbase.org...
Null hsa-miR-519a View Gene Set 1.747e-05 1837 8.702e-05 135 microRNA targets for hsa-miR-519a from miranda.targets www.mirbase.org...
Null hsa-miR-216b View Gene Set 1.892e-05 1416 9.214e-05 139 microRNA targets for hsa-miR-216b from miranda.targets www.mirbase.org...
Null hsa-miR-891b View Gene Set 2.4e-05 1022 0.0001161 140 microRNA targets for hsa-miR-891b from miranda.targets www.mirbase.org...
Null hsa-miR-130a View Gene Set 2.56e-05 1687 0.0001229 141 microRNA targets for hsa-miR-130a from miranda.targets www.mirbase.org...
Null hsa-miR-421 View Gene Set 2.635e-05 1629 0.0001256 142 microRNA targets for hsa-miR-421 from miranda.targets www.mirbase.org...
Null hsa-miR-335 View Gene Set 2.962e-05 1631 0.0001402 143 microRNA targets for hsa-miR-335 from miranda.targets www.mirbase.org...
Null hsa-miR-539 View Gene Set 3.719e-05 2308 0.0001749 144 microRNA targets for hsa-miR-539 from miranda.targets www.mirbase.org...
Null hsa-miR-376a View Gene Set 4.055e-05 1199 0.000188 145 microRNA targets for hsa-miR-376a from miranda.targets www.mirbase.org...
Null hsa-miR-875-3p View Gene Set 4.043e-05 2002 0.000188 145 microRNA targets for hsa-miR-875-3p from miranda.targets www.mirbase.org...
Null hsa-miR-433 View Gene Set 4.145e-05 973 0.0001909 147 microRNA targets for hsa-miR-433 from miranda.targets www.mirbase.org...
Null hsa-miR-520g View Gene Set 4.914e-05 2140 0.0002248 148 microRNA targets for hsa-miR-520g from miranda.targets www.mirbase.org...
Null hsa-miR-587 View Gene Set 5.329e-05 1524 0.0002421 149 microRNA targets for hsa-miR-587 from miranda.targets www.mirbase.org...
Null hsa-miR-129-5p View Gene Set 5.859e-05 1724 0.0002645 150 microRNA targets for hsa-miR-129-5p from miranda.targets www.mirbase.org...
Null hsa-miR-155 View Gene Set 5.919e-05 1331 0.0002654 151 microRNA targets for hsa-miR-155 from miranda.targets www.mirbase.org...
Null hsa-miR-331-5p View Gene Set 6.143e-05 815 0.0002736 152 microRNA targets for hsa-miR-331-5p from miranda.targets www.mirbase.org...
Null hsa-miR-377 View Gene Set 6.605e-05 1713 0.0002922 153 microRNA targets for hsa-miR-377 from miranda.targets www.mirbase.org...
Null hsa-miR-518c View Gene Set 7.159e-05 703 0.0003147 154 microRNA targets for hsa-miR-518c from miranda.targets www.mirbase.org...
Null hsa-miR-520c-3p View Gene Set 7.663e-05 1842 0.0003347 155 microRNA targets for hsa-miR-520c-3p from miranda.targets www.mirbase.org...
Null hsa-miR-1183 View Gene Set 7.739e-05 2417 0.0003359 156 microRNA targets for hsa-miR-1183 from miranda.targets www.mirbase.org...
Null hsa-miR-130b View Gene Set 8.518e-05 1682 0.0003673 157 microRNA targets for hsa-miR-130b from miranda.targets www.mirbase.org...
Null hsa-miR-137 View Gene Set 9.853e-05 1442 0.0004222 158 microRNA targets for hsa-miR-137 from miranda.targets www.mirbase.org...
Null hsa-miR-376b View Gene Set 0.0001125 1357 0.000479 159 microRNA targets for hsa-miR-376b from miranda.targets www.mirbase.org...
Null hsa-miR-151-3p View Gene Set 0.0001179 785 0.0004987 160 microRNA targets for hsa-miR-151-3p from miranda.targets www.mirbase.org...
Null hsa-miR-450a View Gene Set 0.0001211 458 0.0005093 161 microRNA targets for hsa-miR-450a from miranda.targets www.mirbase.org...
Null hsa-miR-485-3p View Gene Set 0.0001325 1229 0.0005537 162 microRNA targets for hsa-miR-485-3p from miranda.targets www.mirbase.org...
Null hsa-miR-1264 View Gene Set 0.0001399 2008 0.000581 163 microRNA targets for hsa-miR-1264 from miranda.targets www.mirbase.org...
Null hsa-miR-1 View Gene Set 0.0001442 1772 0.0005953 164 microRNA targets for hsa-miR-1 from miranda.targets www.mirbase.org...
Null hsa-miR-337-5p View Gene Set 0.0001621 437 0.000665 165 microRNA targets for hsa-miR-337-5p from miranda.targets www.mirbase.org...
Null hsa-miR-628-3p View Gene Set 0.000167 932 0.0006811 166 microRNA targets for hsa-miR-628-3p from miranda.targets www.mirbase.org...
Null hsa-miR-1826 View Gene Set 0.0001688 1313 0.0006845 167 microRNA targets for hsa-miR-1826 from miranda.targets www.mirbase.org...
Null hsa-miR-183 View Gene Set 0.0001739 1239 0.0007006 168 microRNA targets for hsa-miR-183 from miranda.targets www.mirbase.org...
Null hsa-miR-1206 View Gene Set 0.0001757 1455 0.000704 169 microRNA targets for hsa-miR-1206 from miranda.targets www.mirbase.org...
Null hsa-miR-152 View Gene Set 0.0001811 1451 0.0007171 170 microRNA targets for hsa-miR-152 from miranda.targets www.mirbase.org...
Null hsa-miR-34c-3p View Gene Set 0.0001809 762 0.0007171 170 microRNA targets for hsa-miR-34c-3p from miranda.targets www.mirbase.org...
Null hsa-miR-876-5p View Gene Set 0.0002051 1699 0.0008073 172 microRNA targets for hsa-miR-876-5p from miranda.targets www.mirbase.org...
Null hsa-miR-302f View Gene Set 0.0002094 895 0.0008192 173 microRNA targets for hsa-miR-302f from miranda.targets www.mirbase.org...
Null hsa-miR-148a View Gene Set 0.0002178 1504 0.0008475 174 microRNA targets for hsa-miR-148a from miranda.targets www.mirbase.org...
Null hsa-miR-373 View Gene Set 0.0002341 2061 0.0009056 175 microRNA targets for hsa-miR-373 from miranda.targets www.mirbase.org...
Null hsa-miR-106b View Gene Set 0.0002492 1804 0.0009585 176 microRNA targets for hsa-miR-106b from miranda.targets www.mirbase.org...
Null hsa-miR-1279 View Gene Set 0.0002972 809 0.001137 177 microRNA targets for hsa-miR-1279 from miranda.targets www.mirbase.org...
Null hsa-miR-935 View Gene Set 0.0003055 943 0.001162 178 microRNA targets for hsa-miR-935 from miranda.targets www.mirbase.org...
Null hsa-miR-1272 View Gene Set 0.0003191 1955 0.001207 179 microRNA targets for hsa-miR-1272 from miranda.targets www.mirbase.org...
Null hsa-miR-1261 View Gene Set 0.0003572 979 0.001344 180 microRNA targets for hsa-miR-1261 from miranda.targets www.mirbase.org...
Null hsa-miR-33a View Gene Set 0.0003877 1258 0.00145 181 microRNA targets for hsa-miR-33a from miranda.targets www.mirbase.org...
Null hsa-miR-518f View Gene Set 0.0004234 491 0.001575 182 microRNA targets for hsa-miR-518f from miranda.targets www.mirbase.org...
Null hsa-miR-1290 View Gene Set 0.0004563 1539 0.001688 183 microRNA targets for hsa-miR-1290 from miranda.targets www.mirbase.org...
Null hsa-miR-154 View Gene Set 0.00049 1008 0.001803 184 microRNA targets for hsa-miR-154 from miranda.targets www.mirbase.org...
Null hsa-miR-190b View Gene Set 0.0005296 1281 0.001938 185 microRNA targets for hsa-miR-190b from miranda.targets www.mirbase.org...
Null hsa-miR-520b View Gene Set 0.0005375 1700 0.001956 186 microRNA targets for hsa-miR-520b from miranda.targets www.mirbase.org...
Null hsa-miR-363 View Gene Set 0.0005524 1039 0.002 187 microRNA targets for hsa-miR-363 from miranda.targets www.mirbase.org...
Null hsa-miR-337-3p View Gene Set 0.0006104 876 0.002198 188 microRNA targets for hsa-miR-337-3p from miranda.targets www.mirbase.org...
Null hsa-miR-1185 View Gene Set 0.0006261 738 0.002224 189 microRNA targets for hsa-miR-1185 from miranda.targets www.mirbase.org...
Null hsa-miR-182 View Gene Set 0.0006276 1930 0.002224 189 microRNA targets for hsa-miR-182 from miranda.targets www.mirbase.org...
Null hsa-miR-590-5p View Gene Set 0.0006276 1206 0.002224 189 microRNA targets for hsa-miR-590-5p from miranda.targets www.mirbase.org...
Null hsa-miR-507 View Gene Set 0.000638 1167 0.00225 192 microRNA targets for hsa-miR-507 from miranda.targets www.mirbase.org...
Null hsa-miR-556-3p View Gene Set 0.0006835 822 0.002398 193 microRNA targets for hsa-miR-556-3p from miranda.targets www.mirbase.org...
Null hsa-miR-573 View Gene Set 0.00074 2023 0.002582 194 microRNA targets for hsa-miR-573 from miranda.targets www.mirbase.org...
Null hsa-miR-487a View Gene Set 0.0007438 865 0.002582 195 microRNA targets for hsa-miR-487a from miranda.targets www.mirbase.org...
Null hsa-miR-509-3p View Gene Set 0.0007709 711 0.002663 196 microRNA targets for hsa-miR-509-3p from miranda.targets www.mirbase.org...
Null hsa-miR-1208 View Gene Set 0.0007954 1127 0.002733 197 microRNA targets for hsa-miR-1208 from miranda.targets www.mirbase.org...
Null hsa-miR-199a-3p View Gene Set 0.0008137 1232 0.002768 198 microRNA targets for hsa-miR-199a-3p from miranda.targets www.mirbase.org...
Null hsa-miR-199b-3p View Gene Set 0.0008137 1232 0.002768 198 microRNA targets for hsa-miR-199b-3p from miranda.targets www.mirbase.org...
Null hsa-miR-93 View Gene Set 0.0008486 2077 0.002872 200 microRNA targets for hsa-miR-93 from miranda.targets www.mirbase.org...

Gene Set Collection: mirbase.targets

Arguments: refPop=all, featureType=featureNames, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null hsa-let-7f-1* View Gene Set 1.715e-13 751 4.065e-11 1 microRNA targets for hsa-let-7f-1* from mirbase.targets www.mirbase.org...
Null hsa-miR-548a-5p View Gene Set 6.632e-14 763 4.065e-11 1 microRNA targets for hsa-miR-548a-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-548b-5p View Gene Set 1.329e-13 818 4.065e-11 1 microRNA targets for hsa-miR-548b-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-548d-5p View Gene Set 3.894e-13 795 6.922e-11 4 microRNA targets for hsa-miR-548d-5p from mirbase.targets www.mirbase.org...
Null hsa-let-7a* View Gene Set 9.31e-13 772 1.324e-10 5 microRNA targets for hsa-let-7a* from mirbase.targets www.mirbase.org...
Null hsa-miR-590-3p View Gene Set 2.338e-12 742 2.771e-10 6 microRNA targets for hsa-miR-590-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-548c-3p View Gene Set 7.638e-12 863 7.759e-10 7 microRNA targets for hsa-miR-548c-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-568 View Gene Set 2.454e-11 649 2.181e-09 8 microRNA targets for hsa-miR-568 from mirbase.targets www.mirbase.org...
Null hsa-let-7b* View Gene Set 1.129e-10 772 8.922e-09 9 microRNA targets for hsa-let-7b* from mirbase.targets www.mirbase.org...
Null hsa-miR-338-5p View Gene Set 2.573e-10 814 1.83e-08 10 microRNA targets for hsa-miR-338-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-548a-3p View Gene Set 2.091e-09 899 1.352e-07 11 microRNA targets for hsa-miR-548a-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-144 View Gene Set 4.633e-09 796 2.745e-07 12 microRNA targets for hsa-miR-144 from mirbase.targets www.mirbase.org...
Null hsa-miR-548c-5p View Gene Set 5.519e-09 801 3.018e-07 13 microRNA targets for hsa-miR-548c-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-374b View Gene Set 8.554e-09 574 4.055e-07 14 microRNA targets for hsa-miR-374b from mirbase.targets www.mirbase.org...
Null hsa-miR-559 View Gene Set 8.154e-09 463 4.055e-07 14 microRNA targets for hsa-miR-559 from mirbase.targets www.mirbase.org...
Null hsa-miR-561 View Gene Set 1.558e-08 651 6.925e-07 16 microRNA targets for hsa-miR-561 from mirbase.targets www.mirbase.org...
Null hsa-miR-302c* View Gene Set 3.814e-08 615 1.595e-06 17 microRNA targets for hsa-miR-302c* from mirbase.targets www.mirbase.org...
Null hsa-miR-142-5p View Gene Set 5.141e-08 661 2.031e-06 18 microRNA targets for hsa-miR-142-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-495 View Gene Set 6.515e-08 796 2.438e-06 19 microRNA targets for hsa-miR-495 from mirbase.targets www.mirbase.org...
Null hsa-miR-374a View Gene Set 1.371e-07 548 4.874e-06 20 microRNA targets for hsa-miR-374a from mirbase.targets www.mirbase.org...
Null hsa-let-7d* View Gene Set 2.158e-07 781 7.307e-06 21 microRNA targets for hsa-let-7d* from mirbase.targets www.mirbase.org...
Null hsa-miR-26b View Gene Set 2.645e-07 696 8.549e-06 22 microRNA targets for hsa-miR-26b from mirbase.targets www.mirbase.org...
Null hsa-miR-606 View Gene Set 2.767e-07 596 8.554e-06 23 microRNA targets for hsa-miR-606 from mirbase.targets www.mirbase.org...
Null hsa-miR-130a View Gene Set 3.055e-07 807 9.027e-06 24 microRNA targets for hsa-miR-130a from mirbase.targets www.mirbase.org...
Null hsa-miR-452 View Gene Set 3.301e-07 729 9.027e-06 24 microRNA targets for hsa-miR-452 from mirbase.targets www.mirbase.org...
Null hsa-miR-7-1* View Gene Set 3.234e-07 524 9.027e-06 24 microRNA targets for hsa-miR-7-1* from mirbase.targets www.mirbase.org...
Null hsa-miR-369-3p View Gene Set 3.715e-07 750 9.451e-06 27 microRNA targets for hsa-miR-369-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-802 View Gene Set 3.722e-07 683 9.451e-06 27 microRNA targets for hsa-miR-802 from mirbase.targets www.mirbase.org...
Null hsa-miR-26a View Gene Set 5.003e-07 718 1.211e-05 29 microRNA targets for hsa-miR-26a from mirbase.targets www.mirbase.org...
Null hsa-miR-379* View Gene Set 5.112e-07 511 1.211e-05 29 microRNA targets for hsa-miR-379* from mirbase.targets www.mirbase.org...
Null hsa-miR-301b View Gene Set 6.066e-07 763 1.391e-05 31 microRNA targets for hsa-miR-301b from mirbase.targets www.mirbase.org...
Null hsa-miR-301a View Gene Set 6.395e-07 798 1.421e-05 32 microRNA targets for hsa-miR-301a from mirbase.targets www.mirbase.org...
Null hsa-miR-651 View Gene Set 9.505e-07 676 2.038e-05 33 microRNA targets for hsa-miR-651 from mirbase.targets www.mirbase.org...
Null hsa-miR-655 View Gene Set 9.747e-07 654 2.038e-05 33 microRNA targets for hsa-miR-655 from mirbase.targets www.mirbase.org...
Null hsa-miR-548d-3p View Gene Set 1.028e-06 978 2.087e-05 35 microRNA targets for hsa-miR-548d-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-376b View Gene Set 1.581e-06 779 3.123e-05 36 microRNA targets for hsa-miR-376b from mirbase.targets www.mirbase.org...
Null hsa-miR-340 View Gene Set 1.952e-06 581 3.752e-05 37 microRNA targets for hsa-miR-340 from mirbase.targets www.mirbase.org...
Null hsa-let-7f-2* View Gene Set 2.103e-06 820 3.934e-05 38 microRNA targets for hsa-let-7f-2* from mirbase.targets www.mirbase.org...
Null hsa-miR-190 View Gene Set 2.214e-06 668 4.036e-05 39 microRNA targets for hsa-miR-190 from mirbase.targets www.mirbase.org...
Null hsa-miR-101 View Gene Set 2.629e-06 818 4.672e-05 40 microRNA targets for hsa-miR-101 from mirbase.targets www.mirbase.org...
Null hsa-miR-768-3p View Gene Set 3.816e-06 770 6.618e-05 41 microRNA targets for hsa-miR-768-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-300 View Gene Set 4.747e-06 672 8.037e-05 42 microRNA targets for hsa-miR-300 from mirbase.targets www.mirbase.org...
Null hsa-miR-891b View Gene Set 5.684e-06 755 9.398e-05 43 microRNA targets for hsa-miR-891b from mirbase.targets www.mirbase.org...
Null hsa-miR-454 View Gene Set 6.222e-06 769 0.0001005 44 microRNA targets for hsa-miR-454 from mirbase.targets www.mirbase.org...
Null hsa-miR-181d View Gene Set 9.014e-06 864 0.0001424 45 microRNA targets for hsa-miR-181d from mirbase.targets www.mirbase.org...
Null hsa-miR-633 View Gene Set 9.904e-06 568 0.0001531 46 microRNA targets for hsa-miR-633 from mirbase.targets www.mirbase.org...
Null hsa-miR-580 View Gene Set 1.06e-05 530 0.0001603 47 microRNA targets for hsa-miR-580 from mirbase.targets www.mirbase.org...
Null hsa-miR-200b View Gene Set 1.133e-05 854 0.0001654 48 microRNA targets for hsa-miR-200b from mirbase.targets www.mirbase.org...
Null hsa-miR-30d View Gene Set 1.145e-05 770 0.0001654 48 microRNA targets for hsa-miR-30d from mirbase.targets www.mirbase.org...
Null hsa-miR-7-2* View Gene Set 1.163e-05 531 0.0001654 48 microRNA targets for hsa-miR-7-2* from mirbase.targets www.mirbase.org...
Null hsa-miR-1 View Gene Set 1.215e-05 659 0.0001694 51 microRNA targets for hsa-miR-1 from mirbase.targets www.mirbase.org...
Null hsa-miR-217 View Gene Set 1.286e-05 665 0.0001758 52 microRNA targets for hsa-miR-217 from mirbase.targets www.mirbase.org...
Null hsa-miR-499-5p View Gene Set 1.425e-05 761 0.0001911 53 microRNA targets for hsa-miR-499-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-223 View Gene Set 1.584e-05 727 0.0002086 54 microRNA targets for hsa-miR-223 from mirbase.targets www.mirbase.org...
Null hsa-miR-450b-5p View Gene Set 1.666e-05 732 0.0002116 55 microRNA targets for hsa-miR-450b-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-493* View Gene Set 1.638e-05 522 0.0002116 55 microRNA targets for hsa-miR-493* from mirbase.targets www.mirbase.org...
Null hsa-miR-190b View Gene Set 1.732e-05 666 0.0002161 57 microRNA targets for hsa-miR-190b from mirbase.targets www.mirbase.org...
Null hsa-miR-101* View Gene Set 1.853e-05 605 0.0002272 58 microRNA targets for hsa-miR-101* from mirbase.targets www.mirbase.org...
Null hsa-miR-450a View Gene Set 2.089e-05 787 0.0002514 59 microRNA targets for hsa-miR-450a from mirbase.targets www.mirbase.org...
Null hsa-miR-656 View Gene Set 2.121e-05 514 0.0002514 59 microRNA targets for hsa-miR-656 from mirbase.targets www.mirbase.org...
Null hsa-miR-200c View Gene Set 2.374e-05 871 0.0002767 61 microRNA targets for hsa-miR-200c from mirbase.targets www.mirbase.org...
Null hsa-miR-381 View Gene Set 2.456e-05 643 0.0002817 62 microRNA targets for hsa-miR-381 from mirbase.targets www.mirbase.org...
Null hsa-miR-130b View Gene Set 2.896e-05 809 0.0003168 63 microRNA targets for hsa-miR-130b from mirbase.targets www.mirbase.org...
Null hsa-miR-376a View Gene Set 2.878e-05 746 0.0003168 63 microRNA targets for hsa-miR-376a from mirbase.targets www.mirbase.org...
Null hsa-miR-513-3p View Gene Set 2.852e-05 704 0.0003168 63 microRNA targets for hsa-miR-513-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-302d* View Gene Set 2.978e-05 693 0.0003208 66 microRNA targets for hsa-miR-302d* from mirbase.targets www.mirbase.org...
Null hsa-miR-496 View Gene Set 3.661e-05 640 0.0003885 67 microRNA targets for hsa-miR-496 from mirbase.targets www.mirbase.org...
Null hsa-miR-576-5p View Gene Set 4.272e-05 713 0.0004467 68 microRNA targets for hsa-miR-576-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-181b View Gene Set 4.684e-05 874 0.000471 69 microRNA targets for hsa-miR-181b from mirbase.targets www.mirbase.org...
Null hsa-miR-219-5p View Gene Set 4.667e-05 816 0.000471 69 microRNA targets for hsa-miR-219-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-30b View Gene Set 4.703e-05 807 0.000471 69 microRNA targets for hsa-miR-30b from mirbase.targets www.mirbase.org...
Null hsa-miR-548b-3p View Gene Set 4.96e-05 970 0.0004898 72 microRNA targets for hsa-miR-548b-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-411* View Gene Set 5.605e-05 541 0.0005385 73 microRNA targets for hsa-miR-411* from mirbase.targets www.mirbase.org...
Null hsa-miR-551b* View Gene Set 5.573e-05 473 0.0005385 73 microRNA targets for hsa-miR-551b* from mirbase.targets www.mirbase.org...
Null hsa-miR-451 View Gene Set 5.882e-05 766 0.0005503 75 microRNA targets for hsa-miR-451 from mirbase.targets www.mirbase.org...
Null hsa-miR-549 View Gene Set 5.839e-05 718 0.0005503 75 microRNA targets for hsa-miR-549 from mirbase.targets www.mirbase.org...
Null hsa-miR-19a View Gene Set 7.036e-05 803 0.0006497 77 microRNA targets for hsa-miR-19a from mirbase.targets www.mirbase.org...
Null hsa-miR-429 View Gene Set 7.97e-05 793 0.0007265 78 microRNA targets for hsa-miR-429 from mirbase.targets www.mirbase.org...
Null hsa-miR-448 View Gene Set 9.89e-05 660 0.0008901 79 microRNA targets for hsa-miR-448 from mirbase.targets www.mirbase.org...
Null hsa-miR-141 View Gene Set 0.0001015 812 0.0009018 80 microRNA targets for hsa-miR-141 from mirbase.targets www.mirbase.org...
Null hsa-miR-181a View Gene Set 0.0001048 842 0.0009203 81 microRNA targets for hsa-miR-181a from mirbase.targets www.mirbase.org...
Null hsa-miR-23a View Gene Set 0.0001174 807 0.001006 82 microRNA targets for hsa-miR-23a from mirbase.targets www.mirbase.org...
Null hsa-miR-9* View Gene Set 0.000117 570 0.001006 82 microRNA targets for hsa-miR-9* from mirbase.targets www.mirbase.org...
Null hsa-miR-200a View Gene Set 0.0001301 908 0.001097 84 microRNA targets for hsa-miR-200a from mirbase.targets www.mirbase.org...
Null hsa-miR-203 View Gene Set 0.0001311 628 0.001097 84 microRNA targets for hsa-miR-203 from mirbase.targets www.mirbase.org...
Null hsa-miR-186 View Gene Set 0.0001344 589 0.001111 86 microRNA targets for hsa-miR-186 from mirbase.targets www.mirbase.org...
Null hsa-miR-570 View Gene Set 0.0001479 603 0.001208 87 microRNA targets for hsa-miR-570 from mirbase.targets www.mirbase.org...
Null hsa-miR-569 View Gene Set 0.0001676 625 0.001354 88 microRNA targets for hsa-miR-569 from mirbase.targets www.mirbase.org...
Null hsa-miR-519a View Gene Set 0.0001763 964 0.001408 89 microRNA targets for hsa-miR-519a from mirbase.targets www.mirbase.org...
Null hsa-miR-380 View Gene Set 0.0002146 581 0.001695 90 microRNA targets for hsa-miR-380 from mirbase.targets www.mirbase.org...
Null hsa-miR-208 View Gene Set 0.0002466 664 0.001927 91 microRNA targets for hsa-miR-208 from mirbase.targets www.mirbase.org...
Null hsa-miR-586 View Gene Set 0.0002602 721 0.002011 92 microRNA targets for hsa-miR-586 from mirbase.targets www.mirbase.org...
Null hsa-miR-30c View Gene Set 0.0002719 799 0.002064 93 microRNA targets for hsa-miR-30c from mirbase.targets www.mirbase.org...
Null hsa-miR-522 View Gene Set 0.0002729 665 0.002064 93 microRNA targets for hsa-miR-522 from mirbase.targets www.mirbase.org...
Null hsa-miR-181c View Gene Set 0.0002848 855 0.002132 95 microRNA targets for hsa-miR-181c from mirbase.targets www.mirbase.org...
Null hsa-miR-491-3p View Gene Set 0.0002882 767 0.002134 96 microRNA targets for hsa-miR-491-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-410 View Gene Set 0.0002982 614 0.002186 97 microRNA targets for hsa-miR-410 from mirbase.targets www.mirbase.org...
Null hsa-miR-199a-3p View Gene Set 0.0003075 789 0.002228 98 microRNA targets for hsa-miR-199a-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-32* View Gene Set 0.0003102 384 0.002228 98 microRNA targets for hsa-miR-32* from mirbase.targets www.mirbase.org...
Null hsa-miR-500 View Gene Set 0.0003242 620 0.002305 100 microRNA targets for hsa-miR-500 from mirbase.targets www.mirbase.org...
Null hsa-miR-10a* View Gene Set 0.000357 585 0.002513 101 microRNA targets for hsa-miR-10a* from mirbase.targets www.mirbase.org...
Null hsa-miR-30a View Gene Set 0.0003736 767 0.002579 102 microRNA targets for hsa-miR-30a from mirbase.targets www.mirbase.org...
Null hsa-miR-519b-3p View Gene Set 0.0003701 957 0.002579 102 microRNA targets for hsa-miR-519b-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-562 View Gene Set 0.0003829 697 0.002618 104 microRNA targets for hsa-miR-562 from mirbase.targets www.mirbase.org...
Null hsa-miR-302b* View Gene Set 0.0004248 683 0.002877 105 microRNA targets for hsa-miR-302b* from mirbase.targets www.mirbase.org...
Null hsa-miR-30e View Gene Set 0.0004447 773 0.002983 106 microRNA targets for hsa-miR-30e from mirbase.targets www.mirbase.org...
Null hsa-miR-376c View Gene Set 0.0005071 763 0.003339 107 microRNA targets for hsa-miR-376c from mirbase.targets www.mirbase.org...
Null hsa-miR-616* View Gene Set 0.0005049 533 0.003339 107 microRNA targets for hsa-miR-616* from mirbase.targets www.mirbase.org...
Null hsa-miR-23b View Gene Set 0.0005332 772 0.003478 109 microRNA targets for hsa-miR-23b from mirbase.targets www.mirbase.org...
Null hsa-miR-126* View Gene Set 0.0005412 549 0.003498 110 microRNA targets for hsa-miR-126* from mirbase.targets www.mirbase.org...
Null hsa-miR-34b View Gene Set 0.0005968 776 0.003822 111 microRNA targets for hsa-miR-34b from mirbase.targets www.mirbase.org...
Null hsa-miR-582-3p View Gene Set 0.0006043 821 0.003836 112 microRNA targets for hsa-miR-582-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-494 View Gene Set 0.0006655 637 0.004187 113 microRNA targets for hsa-miR-494 from mirbase.targets www.mirbase.org...
Null hsa-miR-195* View Gene Set 0.0007441 446 0.004641 114 microRNA targets for hsa-miR-195* from mirbase.targets www.mirbase.org...
Null hsa-miR-194 View Gene Set 0.000819 731 0.00502 115 microRNA targets for hsa-miR-194 from mirbase.targets www.mirbase.org...
Null hsa-miR-889 View Gene Set 0.0008183 650 0.00502 115 microRNA targets for hsa-miR-889 from mirbase.targets www.mirbase.org...
Null hsa-miR-556-3p View Gene Set 0.0009872 806 0.005949 117 microRNA targets for hsa-miR-556-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-653 View Gene Set 0.0009846 580 0.005949 117 microRNA targets for hsa-miR-653 from mirbase.targets www.mirbase.org...
Null hsa-miR-302a* View Gene Set 0.001106 644 0.006551 119 microRNA targets for hsa-miR-302a* from mirbase.targets www.mirbase.org...
Null hsa-miR-567 View Gene Set 0.001097 618 0.006551 119 microRNA targets for hsa-miR-567 from mirbase.targets www.mirbase.org...
Null hsa-miR-335* View Gene Set 0.001209 465 0.007107 121 microRNA targets for hsa-miR-335* from mirbase.targets www.mirbase.org...
Null hsa-miR-519c-3p View Gene Set 0.001292 958 0.007527 122 microRNA targets for hsa-miR-519c-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-507 View Gene Set 0.001415 721 0.00818 123 microRNA targets for hsa-miR-507 from mirbase.targets www.mirbase.org...
Null hsa-miR-361-5p View Gene Set 0.001455 677 0.008344 124 microRNA targets for hsa-miR-361-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-409-3p View Gene Set 0.001565 654 0.008902 125 microRNA targets for hsa-miR-409-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-545 View Gene Set 0.001627 761 0.009181 126 microRNA targets for hsa-miR-545 from mirbase.targets www.mirbase.org...
Null hsa-miR-577 View Gene Set 0.001867 452 0.01046 127 microRNA targets for hsa-miR-577 from mirbase.targets www.mirbase.org...
Null hsa-miR-153 View Gene Set 0.002029 745 0.01127 128 microRNA targets for hsa-miR-153 from mirbase.targets www.mirbase.org...
Null hsa-miR-323-3p View Gene Set 0.002175 756 0.01199 129 microRNA targets for hsa-miR-323-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-19b View Gene Set 0.002264 789 0.01238 130 microRNA targets for hsa-miR-19b from mirbase.targets www.mirbase.org...
Null hsa-miR-15b* View Gene Set 0.002349 587 0.01275 131 microRNA targets for hsa-miR-15b* from mirbase.targets www.mirbase.org...
Null hsa-let-7e* View Gene Set 0.002405 790 0.0129 132 microRNA targets for hsa-let-7e* from mirbase.targets www.mirbase.org...
Null hsa-miR-508-3p View Gene Set 0.002418 690 0.0129 132 microRNA targets for hsa-miR-508-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-628-5p View Gene Set 0.002431 829 0.0129 132 microRNA targets for hsa-miR-628-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-16-2* View Gene Set 0.00279 507 0.01459 135 microRNA targets for hsa-miR-16-2* from mirbase.targets www.mirbase.org...
Null hsa-miR-383 View Gene Set 0.002783 748 0.01459 135 microRNA targets for hsa-miR-383 from mirbase.targets www.mirbase.org...
Null hsa-miR-520d-5p View Gene Set 0.002858 832 0.01483 137 microRNA targets for hsa-miR-520d-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-890 View Gene Set 0.003261 713 0.0168 138 microRNA targets for hsa-miR-890 from mirbase.targets www.mirbase.org...
Null hsa-miR-521 View Gene Set 0.003479 700 0.0178 139 microRNA targets for hsa-miR-521 from mirbase.targets www.mirbase.org...
Null hsa-miR-641 View Gene Set 0.003611 629 0.01832 140 microRNA targets for hsa-miR-641 from mirbase.targets www.mirbase.org...
Null hsa-miR-708* View Gene Set 0.003632 568 0.01832 140 microRNA targets for hsa-miR-708* from mirbase.targets www.mirbase.org...
Null hsa-miR-587 View Gene Set 0.003757 739 0.01881 142 microRNA targets for hsa-miR-587 from mirbase.targets www.mirbase.org...
Null hsa-miR-487a View Gene Set 0.003798 689 0.01888 143 microRNA targets for hsa-miR-487a from mirbase.targets www.mirbase.org...
Null hsa-miR-126 View Gene Set 0.003844 676 0.01898 144 microRNA targets for hsa-miR-126 from mirbase.targets www.mirbase.org...
Null hsa-miR-519d View Gene Set 0.003922 779 0.01923 145 microRNA targets for hsa-miR-519d from mirbase.targets www.mirbase.org...
Null hsa-miR-374b* View Gene Set 0.003995 604 0.01946 146 microRNA targets for hsa-miR-374b* from mirbase.targets www.mirbase.org...
Null hsa-miR-374a* View Gene Set 0.004113 491 0.01989 147 microRNA targets for hsa-miR-374a* from mirbase.targets www.mirbase.org...
Null hsa-miR-105 View Gene Set 0.004249 719 0.02041 148 microRNA targets for hsa-miR-105 from mirbase.targets www.mirbase.org...
Null hsa-miR-524-5p View Gene Set 0.004316 708 0.0206 149 microRNA targets for hsa-miR-524-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-144* View Gene Set 0.004742 446 0.02248 150 microRNA targets for hsa-miR-144* from mirbase.targets www.mirbase.org...
Null hsa-miR-130a* View Gene Set 0.004954 606 0.02333 151 microRNA targets for hsa-miR-130a* from mirbase.targets www.mirbase.org...
Null hsa-miR-106a* View Gene Set 0.005072 554 0.02367 152 microRNA targets for hsa-miR-106a* from mirbase.targets www.mirbase.org...
Null hsa-miR-30d* View Gene Set 0.005094 717 0.02367 152 microRNA targets for hsa-miR-30d* from mirbase.targets www.mirbase.org...
Null hsa-miR-16-1* View Gene Set 0.005141 557 0.02373 154 microRNA targets for hsa-miR-16-1* from mirbase.targets www.mirbase.org...
Null hsa-miR-106b View Gene Set 0.005507 872 0.025 155 microRNA targets for hsa-miR-106b from mirbase.targets www.mirbase.org...
Null hsa-miR-582-5p View Gene Set 0.005519 759 0.025 155 microRNA targets for hsa-miR-582-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-625* View Gene Set 0.00545 455 0.025 155 microRNA targets for hsa-miR-625* from mirbase.targets www.mirbase.org...
Null hsa-miR-33a* View Gene Set 0.005774 530 0.02598 158 microRNA targets for hsa-miR-33a* from mirbase.targets www.mirbase.org...
Null hsa-miR-155 View Gene Set 0.005851 740 0.02617 159 microRNA targets for hsa-miR-155 from mirbase.targets www.mirbase.org...
Null hsa-miR-215 View Gene Set 0.005929 724 0.02635 160 microRNA targets for hsa-miR-215 from mirbase.targets www.mirbase.org...
Null hsa-miR-590-5p View Gene Set 0.006132 837 0.02708 161 microRNA targets for hsa-miR-590-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-142-3p View Gene Set 0.006432 756 0.02823 162 microRNA targets for hsa-miR-142-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-452* View Gene Set 0.006961 532 0.03036 163 microRNA targets for hsa-miR-452* from mirbase.targets www.mirbase.org...
Null hsa-miR-424* View Gene Set 0.007401 487 0.03209 164 microRNA targets for hsa-miR-424* from mirbase.targets www.mirbase.org...
Null hsa-miR-363 View Gene Set 0.007742 678 0.03336 165 microRNA targets for hsa-miR-363 from mirbase.targets www.mirbase.org...
Null hsa-miR-335 View Gene Set 0.007838 729 0.03337 166 microRNA targets for hsa-miR-335 from mirbase.targets www.mirbase.org...
Null hsa-miR-337-5p View Gene Set 0.007797 795 0.03337 166 microRNA targets for hsa-miR-337-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-628-3p View Gene Set 0.007903 705 0.03345 168 microRNA targets for hsa-miR-628-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-545* View Gene Set 0.008253 518 0.03472 169 microRNA targets for hsa-miR-545* from mirbase.targets www.mirbase.org...
Null hsa-miR-200b* View Gene Set 0.008387 660 0.03508 170 microRNA targets for hsa-miR-200b* from mirbase.targets www.mirbase.org...
Null hsa-miR-100* View Gene Set 0.008684 519 0.03611 171 microRNA targets for hsa-miR-100* from mirbase.targets www.mirbase.org...
Null hsa-miR-888 View Gene Set 0.008905 699 0.03681 172 microRNA targets for hsa-miR-888 from mirbase.targets www.mirbase.org...
Null hsa-miR-649 View Gene Set 0.009242 712 0.03798 173 microRNA targets for hsa-miR-649 from mirbase.targets www.mirbase.org...
Null hsa-miR-539 View Gene Set 0.009668 539 0.03951 174 microRNA targets for hsa-miR-539 from mirbase.targets www.mirbase.org...
Null hsa-miR-511 View Gene Set 0.01023 624 0.04155 175 microRNA targets for hsa-miR-511 from mirbase.targets www.mirbase.org...
Null hsa-miR-411 View Gene Set 0.01098 696 0.04434 176 microRNA targets for hsa-miR-411 from mirbase.targets www.mirbase.org...
Null hsa-miR-556-5p View Gene Set 0.01117 739 0.04485 177 microRNA targets for hsa-miR-556-5p from mirbase.targets www.mirbase.org...
Null hsa-let-7c* View Gene Set 0.01151 755 0.04597 178 microRNA targets for hsa-let-7c* from mirbase.targets www.mirbase.org...
Null hsa-miR-944 View Gene Set 0.0116 567 0.0461 179 microRNA targets for hsa-miR-944 from mirbase.targets www.mirbase.org...
Null hsa-miR-643 View Gene Set 0.01197 639 0.0471 180 microRNA targets for hsa-miR-643 from mirbase.targets www.mirbase.org...
Null hsa-miR-95 View Gene Set 0.01199 787 0.0471 180 microRNA targets for hsa-miR-95 from mirbase.targets www.mirbase.org...
Null hsa-miR-488 View Gene Set 0.01268 657 0.04953 182 microRNA targets for hsa-miR-488 from mirbase.targets www.mirbase.org...

Gene Set Collection: mirtarget2.targets

Arguments: refPop=all, featureType=featureNames, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null hsa-miR-590-3p View Gene Set 1e-23 2046 5.533e-21 1 microRNA targets for hsa-miR-590-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-513-3p View Gene Set 2.614e-17 1119 7.228e-15 2 microRNA targets for hsa-miR-513-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-548b-5p View Gene Set 1.598e-16 1157 2.945e-14 3 microRNA targets for hsa-miR-548b-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-561 View Gene Set 2.324e-16 1193 3.213e-14 4 microRNA targets for hsa-miR-561 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-548c-5p View Gene Set 2.383e-15 1151 2.635e-13 5 microRNA targets for hsa-miR-548c-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-548a-5p View Gene Set 5.941e-15 1120 5.475e-13 6 microRNA targets for hsa-miR-548a-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-548a-3p View Gene Set 8.163e-15 900 5.643e-13 7 microRNA targets for hsa-miR-548a-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-548c-3p View Gene Set 7.907e-15 1804 5.643e-13 7 microRNA targets for hsa-miR-548c-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-548d-5p View Gene Set 1.679e-14 1147 1.031e-12 9 microRNA targets for hsa-miR-548d-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-944 View Gene Set 1.368e-12 1362 7.563e-11 10 microRNA targets for hsa-miR-944 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-23a View Gene Set 4.823e-12 858 2.425e-10 11 microRNA targets for hsa-miR-23a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-23b View Gene Set 7.704e-12 875 3.55e-10 12 microRNA targets for hsa-miR-23b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-655 View Gene Set 8.4e-12 820 3.573e-10 13 microRNA targets for hsa-miR-655 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-548d-3p View Gene Set 1.329e-11 1107 5.248e-10 14 microRNA targets for hsa-miR-548d-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-450b-5p View Gene Set 2.177e-11 691 8.026e-10 15 microRNA targets for hsa-miR-450b-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-607 View Gene Set 3.796e-11 1137 1.312e-09 16 microRNA targets for hsa-miR-607 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-500 View Gene Set 6.395e-11 378 2.08e-09 17 microRNA targets for hsa-miR-500 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-186 View Gene Set 7.983e-11 1020 2.453e-09 18 microRNA targets for hsa-miR-186 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-559 View Gene Set 1.396e-10 977 4.062e-09 19 microRNA targets for hsa-miR-559 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-338-5p View Gene Set 6.931e-10 948 1.825e-08 20 microRNA targets for hsa-miR-338-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-543 View Gene Set 6.84e-10 710 1.825e-08 20 microRNA targets for hsa-miR-543 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-142-5p View Gene Set 9.608e-10 727 2.415e-08 22 microRNA targets for hsa-miR-142-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-323-3p View Gene Set 1.024e-09 402 2.463e-08 23 microRNA targets for hsa-miR-323-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-26a View Gene Set 1.276e-09 498 2.941e-08 24 microRNA targets for hsa-miR-26a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-587 View Gene Set 1.477e-09 590 3.267e-08 25 microRNA targets for hsa-miR-587 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-577 View Gene Set 1.968e-09 731 4.187e-08 26 microRNA targets for hsa-miR-577 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-452 View Gene Set 2.688e-09 577 5.506e-08 27 microRNA targets for hsa-miR-452 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-586 View Gene Set 4.427e-09 587 8.743e-08 28 microRNA targets for hsa-miR-586 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-570 View Gene Set 5.647e-09 983 1.077e-07 29 microRNA targets for hsa-miR-570 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-26b View Gene Set 1.668e-08 493 3.074e-07 30 microRNA targets for hsa-miR-26b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-582-5p View Gene Set 1.758e-08 526 3.136e-07 31 microRNA targets for hsa-miR-582-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-494 View Gene Set 2.413e-08 696 4.169e-07 32 microRNA targets for hsa-miR-494 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-374b View Gene Set 3.014e-08 902 5.051e-07 33 microRNA targets for hsa-miR-374b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-203 View Gene Set 3.635e-08 754 5.912e-07 34 microRNA targets for hsa-miR-203 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-520d-5p View Gene Set 4.112e-08 826 6.497e-07 35 microRNA targets for hsa-miR-520d-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-130b View Gene Set 5.102e-08 445 7.703e-07 36 microRNA targets for hsa-miR-130b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-380 View Gene Set 5.154e-08 496 7.703e-07 36 microRNA targets for hsa-miR-380 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-20a View Gene Set 5.909e-08 754 8.378e-07 38 microRNA targets for hsa-miR-20a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-369-3p View Gene Set 5.865e-08 686 8.378e-07 38 microRNA targets for hsa-miR-369-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-181b View Gene Set 9.138e-08 887 1.233e-06 40 microRNA targets for hsa-miR-181b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-524-5p View Gene Set 9.032e-08 862 1.233e-06 40 microRNA targets for hsa-miR-524-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-144 View Gene Set 1.242e-07 649 1.635e-06 42 microRNA targets for hsa-miR-144 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-495 View Gene Set 1.677e-07 1246 2.157e-06 43 microRNA targets for hsa-miR-495 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-340 View Gene Set 1.786e-07 874 2.245e-06 44 microRNA targets for hsa-miR-340 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-300 View Gene Set 1.829e-07 528 2.248e-06 45 microRNA targets for hsa-miR-300 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-374a View Gene Set 1.947e-07 894 2.341e-06 46 microRNA targets for hsa-miR-374a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-101 View Gene Set 2.287e-07 433 2.691e-06 47 microRNA targets for hsa-miR-101 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-181d View Gene Set 3.401e-07 882 3.918e-06 48 microRNA targets for hsa-miR-181d from mirtarget2.targets www.mirbase.org...
Null hsa-miR-181a View Gene Set 4.308e-07 879 4.862e-06 49 microRNA targets for hsa-miR-181a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-181c View Gene Set 4.494e-07 909 4.971e-06 50 microRNA targets for hsa-miR-181c from mirtarget2.targets www.mirbase.org...
Null hsa-miR-381 View Gene Set 5.778e-07 544 6.029e-06 51 microRNA targets for hsa-miR-381 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-768-3p View Gene Set 5.724e-07 333 6.029e-06 51 microRNA targets for hsa-miR-768-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-802 View Gene Set 5.612e-07 428 6.029e-06 51 microRNA targets for hsa-miR-802 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-106b View Gene Set 6.227e-07 736 6.377e-06 54 microRNA targets for hsa-miR-106b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-301b View Gene Set 8.426e-07 442 8.472e-06 55 microRNA targets for hsa-miR-301b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-106a View Gene Set 8.817e-07 781 8.707e-06 56 microRNA targets for hsa-miR-106a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-576-5p View Gene Set 9.317e-07 589 9.039e-06 57 microRNA targets for hsa-miR-576-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-34b View Gene Set 9.549e-07 350 9.104e-06 58 microRNA targets for hsa-miR-34b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-130a View Gene Set 1.066e-06 440 9.995e-06 59 microRNA targets for hsa-miR-130a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-892a View Gene Set 1.708e-06 352 1.574e-05 60 microRNA targets for hsa-miR-892a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-200c View Gene Set 2.094e-06 668 1.899e-05 61 microRNA targets for hsa-miR-200c from mirtarget2.targets www.mirbase.org...
Null hsa-miR-382 View Gene Set 2.327e-06 355 2.076e-05 62 microRNA targets for hsa-miR-382 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-568 View Gene Set 3.511e-06 521 3.082e-05 63 microRNA targets for hsa-miR-568 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-606 View Gene Set 3.624e-06 282 3.131e-05 64 microRNA targets for hsa-miR-606 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-371-5p View Gene Set 4.081e-06 354 3.472e-05 65 microRNA targets for hsa-miR-371-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-17 View Gene Set 4.557e-06 784 3.792e-05 66 microRNA targets for hsa-miR-17 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-579 View Gene Set 4.594e-06 625 3.792e-05 66 microRNA targets for hsa-miR-579 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-194 View Gene Set 5.293e-06 291 4.242e-05 68 microRNA targets for hsa-miR-194 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-656 View Gene Set 5.252e-06 876 4.242e-05 68 microRNA targets for hsa-miR-656 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-501-5p View Gene Set 6.164e-06 462 4.87e-05 70 microRNA targets for hsa-miR-501-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-429 View Gene Set 6.255e-06 640 4.872e-05 71 microRNA targets for hsa-miR-429 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-549 View Gene Set 6.376e-06 200 4.897e-05 72 microRNA targets for hsa-miR-549 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-522 View Gene Set 7.115e-06 618 5.39e-05 73 microRNA targets for hsa-miR-522 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-200b View Gene Set 9.312e-06 671 6.959e-05 74 microRNA targets for hsa-miR-200b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-148a View Gene Set 9.938e-06 325 7.328e-05 75 microRNA targets for hsa-miR-148a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-93 View Gene Set 1.028e-05 775 7.481e-05 76 microRNA targets for hsa-miR-93 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-377 View Gene Set 1.042e-05 449 7.486e-05 77 microRNA targets for hsa-miR-377 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-301a View Gene Set 1.187e-05 448 8.417e-05 78 microRNA targets for hsa-miR-301a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-505 View Gene Set 1.237e-05 240 8.66e-05 79 microRNA targets for hsa-miR-505 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-633 View Gene Set 1.253e-05 303 8.661e-05 80 microRNA targets for hsa-miR-633 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-27a View Gene Set 1.647e-05 518 0.0001124 81 microRNA targets for hsa-miR-27a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-224 View Gene Set 1.767e-05 370 0.0001192 82 microRNA targets for hsa-miR-224 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-519d View Gene Set 1.818e-05 714 0.0001211 83 microRNA targets for hsa-miR-519d from mirtarget2.targets www.mirbase.org...
Null hsa-miR-875-3p View Gene Set 1.979e-05 635 0.0001303 84 microRNA targets for hsa-miR-875-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-454 View Gene Set 2.028e-05 442 0.000132 85 microRNA targets for hsa-miR-454 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-361-5p View Gene Set 2.111e-05 321 0.0001358 86 microRNA targets for hsa-miR-361-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-30c View Gene Set 3.126e-05 665 0.0001987 87 microRNA targets for hsa-miR-30c from mirtarget2.targets www.mirbase.org...
Null hsa-miR-20b View Gene Set 3.17e-05 795 0.000199 88 microRNA targets for hsa-miR-20b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-365 View Gene Set 3.202e-05 156 0.000199 88 microRNA targets for hsa-miR-365 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-641 View Gene Set 3.276e-05 659 0.0002013 90 microRNA targets for hsa-miR-641 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-888 View Gene Set 3.552e-05 450 0.0002159 91 microRNA targets for hsa-miR-888 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-410 View Gene Set 3.688e-05 563 0.0002174 92 microRNA targets for hsa-miR-410 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-488 View Gene Set 3.695e-05 342 0.0002174 92 microRNA targets for hsa-miR-488 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-544 View Gene Set 3.63e-05 484 0.0002174 92 microRNA targets for hsa-miR-544 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-448 View Gene Set 4.232e-05 500 0.0002463 95 microRNA targets for hsa-miR-448 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-30b View Gene Set 4.547e-05 670 0.0002619 96 microRNA targets for hsa-miR-30b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-200a View Gene Set 4.903e-05 589 0.0002795 97 microRNA targets for hsa-miR-200a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-30a View Gene Set 5.056e-05 680 0.0002853 98 microRNA targets for hsa-miR-30a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-140-5p View Gene Set 5.11e-05 248 0.0002854 99 microRNA targets for hsa-miR-140-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-653 View Gene Set 6.561e-05 305 0.0003628 100 microRNA targets for hsa-miR-653 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-27b View Gene Set 6.91e-05 528 0.0003783 101 microRNA targets for hsa-miR-27b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-154 View Gene Set 7.767e-05 233 0.0004195 102 microRNA targets for hsa-miR-154 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-646 View Gene Set 7.814e-05 365 0.0004195 102 microRNA targets for hsa-miR-646 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-511 View Gene Set 8.281e-05 733 0.0004403 104 microRNA targets for hsa-miR-511 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-595 View Gene Set 8.641e-05 245 0.0004551 105 microRNA targets for hsa-miR-595 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-421 View Gene Set 0.0001005 334 0.0005242 106 microRNA targets for hsa-miR-421 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-129-5p View Gene Set 0.0001146 925 0.000592 107 microRNA targets for hsa-miR-129-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-30e View Gene Set 0.0001258 693 0.0006444 108 microRNA targets for hsa-miR-30e from mirtarget2.targets www.mirbase.org...
Null hsa-miR-105 View Gene Set 0.0001299 524 0.000659 109 microRNA targets for hsa-miR-105 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-222 View Gene Set 0.0001319 243 0.0006633 110 microRNA targets for hsa-miR-222 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-142-3p View Gene Set 0.0001371 150 0.0006831 111 microRNA targets for hsa-miR-142-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-433 View Gene Set 0.0001456 301 0.0007188 112 microRNA targets for hsa-miR-433 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-141 View Gene Set 0.000147 574 0.0007192 113 microRNA targets for hsa-miR-141 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-302c View Gene Set 0.0001508 370 0.0007315 114 microRNA targets for hsa-miR-302c from mirtarget2.targets www.mirbase.org...
Null hsa-miR-871 View Gene Set 0.0001549 570 0.0007448 115 microRNA targets for hsa-miR-871 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-512-3p View Gene Set 0.0001636 277 0.00078 116 microRNA targets for hsa-miR-512-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-152 View Gene Set 0.0001651 337 0.0007801 117 microRNA targets for hsa-miR-152 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-148b View Gene Set 0.0001811 329 0.0008485 118 microRNA targets for hsa-miR-148b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-216b View Gene Set 0.0001873 392 0.0008634 119 microRNA targets for hsa-miR-216b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-499-3p View Gene Set 0.0001864 327 0.0008634 119 microRNA targets for hsa-miR-499-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-221 View Gene Set 0.0001892 264 0.0008645 121 microRNA targets for hsa-miR-221 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-30d View Gene Set 0.0001937 694 0.0008781 122 microRNA targets for hsa-miR-30d from mirtarget2.targets www.mirbase.org...
Null hsa-miR-124 View Gene Set 0.0002102 432 0.0009451 123 microRNA targets for hsa-miR-124 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-217 View Gene Set 0.0002317 365 0.001033 124 microRNA targets for hsa-miR-217 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-659 View Gene Set 0.0002612 247 0.001156 125 microRNA targets for hsa-miR-659 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-885-5p View Gene Set 0.0002748 167 0.001206 126 microRNA targets for hsa-miR-885-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-520e View Gene Set 0.0002922 443 0.001272 127 microRNA targets for hsa-miR-520e from mirtarget2.targets www.mirbase.org...
Null hsa-miR-624 View Gene Set 0.0003527 253 0.001524 128 microRNA targets for hsa-miR-624 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-302a View Gene Set 0.0003616 382 0.00155 129 microRNA targets for hsa-miR-302a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-491-3p View Gene Set 0.0003739 283 0.00159 130 microRNA targets for hsa-miR-491-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-545 View Gene Set 0.0003959 600 0.001671 131 microRNA targets for hsa-miR-545 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-630 View Gene Set 0.000436 248 0.001827 132 microRNA targets for hsa-miR-630 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-582-3p View Gene Set 0.0004623 231 0.001922 133 microRNA targets for hsa-miR-582-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-519c-3p View Gene Set 0.000509 493 0.0021 134 microRNA targets for hsa-miR-519c-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-520c-3p View Gene Set 0.0005561 452 0.002261 135 microRNA targets for hsa-miR-520c-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-600 View Gene Set 0.0005552 310 0.002261 135 microRNA targets for hsa-miR-600 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-302d View Gene Set 0.0005669 418 0.002272 137 microRNA targets for hsa-miR-302d from mirtarget2.targets www.mirbase.org...
Null hsa-miR-331-5p View Gene Set 0.0005639 219 0.002272 137 microRNA targets for hsa-miR-331-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-190b View Gene Set 0.0005773 189 0.002297 139 microRNA targets for hsa-miR-190b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-196b View Gene Set 0.0006588 157 0.002602 140 microRNA targets for hsa-miR-196b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-376c View Gene Set 0.0006786 327 0.002661 141 microRNA targets for hsa-miR-376c from mirtarget2.targets www.mirbase.org...
Null hsa-miR-212 View Gene Set 0.0007574 314 0.002949 142 microRNA targets for hsa-miR-212 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-337-3p View Gene Set 0.0008026 231 0.003104 143 microRNA targets for hsa-miR-337-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-192 View Gene Set 0.0008387 121 0.003191 144 microRNA targets for hsa-miR-192 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-539 View Gene Set 0.0008424 601 0.003191 144 microRNA targets for hsa-miR-539 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-890 View Gene Set 0.0008345 234 0.003191 144 microRNA targets for hsa-miR-890 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-411 View Gene Set 0.0008578 130 0.003219 147 microRNA targets for hsa-miR-411 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-519e View Gene Set 0.0008615 186 0.003219 147 microRNA targets for hsa-miR-519e from mirtarget2.targets www.mirbase.org...
Null hsa-miR-515-5p View Gene Set 0.0009115 396 0.003383 149 microRNA targets for hsa-miR-515-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-302b View Gene Set 0.0009339 406 0.003427 150 microRNA targets for hsa-miR-302b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-520a-3p View Gene Set 0.0009357 468 0.003427 150 microRNA targets for hsa-miR-520a-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-569 View Gene Set 0.0009854 276 0.003585 152 microRNA targets for hsa-miR-569 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-506 View Gene Set 0.001007 439 0.003617 153 microRNA targets for hsa-miR-506 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-891b View Gene Set 0.001004 245 0.003617 153 microRNA targets for hsa-miR-891b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-520b View Gene Set 0.001057 451 0.003772 155 microRNA targets for hsa-miR-520b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-373 View Gene Set 0.001103 404 0.003908 156 microRNA targets for hsa-miR-373 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-219-2-3p View Gene Set 0.001119 256 0.00394 157 microRNA targets for hsa-miR-219-2-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-196a View Gene Set 0.001127 156 0.003943 158 microRNA targets for hsa-miR-196a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-643 View Gene Set 0.00115 292 0.003999 159 microRNA targets for hsa-miR-643 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-520d-3p View Gene Set 0.00116 456 0.004011 160 microRNA targets for hsa-miR-520d-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-889 View Gene Set 0.001245 370 0.004277 161 microRNA targets for hsa-miR-889 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-134 View Gene Set 0.001294 165 0.004416 162 microRNA targets for hsa-miR-134 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-935 View Gene Set 0.001497 283 0.005078 163 microRNA targets for hsa-miR-935 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-515-3p View Gene Set 0.001534 177 0.005152 164 microRNA targets for hsa-miR-515-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-519b-3p View Gene Set 0.001537 484 0.005152 164 microRNA targets for hsa-miR-519b-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-376a View Gene Set 0.001562 261 0.005203 166 microRNA targets for hsa-miR-376a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-558 View Gene Set 0.00169 115 0.005597 167 microRNA targets for hsa-miR-558 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-875-5p View Gene Set 0.001702 150 0.005602 168 microRNA targets for hsa-miR-875-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-132 View Gene Set 0.001735 296 0.005644 169 microRNA targets for hsa-miR-132 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-320 View Gene Set 0.001728 550 0.005644 169 microRNA targets for hsa-miR-320 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-519a View Gene Set 0.00178 486 0.005756 171 microRNA targets for hsa-miR-519a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-520h View Gene Set 0.001844 428 0.00593 172 microRNA targets for hsa-miR-520h from mirtarget2.targets www.mirbase.org...
Null hsa-miR-584 View Gene Set 0.001863 278 0.005955 173 microRNA targets for hsa-miR-584 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-32 View Gene Set 0.001887 373 0.005963 174 microRNA targets for hsa-miR-32 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-372 View Gene Set 0.001878 435 0.005963 174 microRNA targets for hsa-miR-372 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-376b View Gene Set 0.002192 260 0.006879 176 microRNA targets for hsa-miR-376b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-520g View Gene Set 0.002202 429 0.006879 176 microRNA targets for hsa-miR-520g from mirtarget2.targets www.mirbase.org...
Null hsa-miR-425 View Gene Set 0.002269 237 0.007048 178 microRNA targets for hsa-miR-425 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-299-5p View Gene Set 0.002322 163 0.007174 179 microRNA targets for hsa-miR-299-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-509-5p View Gene Set 0.002372 365 0.007287 180 microRNA targets for hsa-miR-509-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-19a View Gene Set 0.002439 539 0.007451 181 microRNA targets for hsa-miR-19a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-183 View Gene Set 0.002481 240 0.007538 182 microRNA targets for hsa-miR-183 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-498 View Gene Set 0.002649 326 0.008006 183 microRNA targets for hsa-miR-498 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-330-3p View Gene Set 0.002959 682 0.008894 184 microRNA targets for hsa-miR-330-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-640 View Gene Set 0.003022 166 0.009034 185 microRNA targets for hsa-miR-640 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-520a-5p View Gene Set 0.003041 294 0.009042 186 microRNA targets for hsa-miR-520a-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-216a View Gene Set 0.00313 352 0.009257 187 microRNA targets for hsa-miR-216a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-603 View Gene Set 0.003216 446 0.00946 188 microRNA targets for hsa-miR-603 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-651 View Gene Set 0.003328 250 0.00973 189 microRNA targets for hsa-miR-651 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-674 View Gene Set 0.003343 274 0.00973 189 microRNA targets for hsa-miR-674 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-532-5p View Gene Set 0.003583 279 0.01037 191 microRNA targets for hsa-miR-532-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-135a View Gene Set 0.003653 301 0.01052 192 microRNA targets for hsa-miR-135a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-872 View Gene Set 0.004264 160 0.01222 193 microRNA targets for hsa-miR-872 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-525-5p View Gene Set 0.004313 285 0.01229 194 microRNA targets for hsa-miR-525-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-455-3p View Gene Set 0.004459 184 0.01264 195 microRNA targets for hsa-miR-455-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-493 View Gene Set 0.004506 98 0.01271 196 microRNA targets for hsa-miR-493 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-151-3p View Gene Set 0.00455 149 0.01273 197 microRNA targets for hsa-miR-151-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-19b View Gene Set 0.004556 536 0.01273 197 microRNA targets for hsa-miR-19b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-155 View Gene Set 0.004582 427 0.01273 199 microRNA targets for hsa-miR-155 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-601 View Gene Set 0.004622 87 0.01278 200 microRNA targets for hsa-miR-601 from mirtarget2.targets www.mirbase.org...

Gene Set Collection: pictar.targets

Arguments: refPop=all, featureType=featureNames, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null hsa-miR-302c* View Gene Set 1.031e-09 371 1.835e-07 1 microRNA targets for hsa-miR-302c* from pictar.targets www.mirbase.org...
Null hsa-miR-186 View Gene Set 3.504e-07 441 3.118e-05 2 microRNA targets for hsa-miR-186 from pictar.targets www.mirbase.org...
Null hsa-miR-323 View Gene Set 8.179e-07 248 4.853e-05 3 microRNA targets for hsa-miR-323 from pictar.targets www.mirbase.org...
Null hsa-miR-23b View Gene Set 1.201e-06 420 5.344e-05 4 microRNA targets for hsa-miR-23b from pictar.targets www.mirbase.org...
Null hsa-miR-23a View Gene Set 1.881e-06 418 6.698e-05 5 microRNA targets for hsa-miR-23a from pictar.targets www.mirbase.org...
Null hsa-miR-302d View Gene Set 2.478e-06 375 7.352e-05 6 microRNA targets for hsa-miR-302d from pictar.targets www.mirbase.org...
Null hsa-miR-302a View Gene Set 4.819e-06 374 0.0001225 7 microRNA targets for hsa-miR-302a from pictar.targets www.mirbase.org...
Null hsa-miR-302c View Gene Set 5.614e-06 355 0.0001249 8 microRNA targets for hsa-miR-302c from pictar.targets www.mirbase.org...
Null hsa-miR-181c View Gene Set 8.104e-06 499 0.0001442 9 microRNA targets for hsa-miR-181c from pictar.targets www.mirbase.org...
Null hsa-miR-223 View Gene Set 7.691e-06 136 0.0001442 9 microRNA targets for hsa-miR-223 from pictar.targets www.mirbase.org...
Null hsa-miR-181a View Gene Set 1.158e-05 500 0.0001797 11 microRNA targets for hsa-miR-181a from pictar.targets www.mirbase.org...
Null hsa-miR-181b View Gene Set 1.246e-05 500 0.0001797 11 microRNA targets for hsa-miR-181b from pictar.targets www.mirbase.org...
Null hsa-miR-302b View Gene Set 1.313e-05 351 0.0001797 11 microRNA targets for hsa-miR-302b from pictar.targets www.mirbase.org...
Null hsa-miR-369-3p View Gene Set 2.073e-05 335 0.0002636 14 microRNA targets for hsa-miR-369-3p from pictar.targets www.mirbase.org...
Null hsa-miR-26a View Gene Set 2.86e-05 501 0.0002994 15 microRNA targets for hsa-miR-26a from pictar.targets www.mirbase.org...
Null hsa-miR-26b View Gene Set 3.354e-05 508 0.0002994 15 microRNA targets for hsa-miR-26b from pictar.targets www.mirbase.org...
Null hsa-miR-30a-5p View Gene Set 3.474e-05 700 0.0002994 15 microRNA targets for hsa-miR-30a-5p from pictar.targets www.mirbase.org...
Null hsa-miR-30b View Gene Set 3.344e-05 699 0.0002994 15 microRNA targets for hsa-miR-30b from pictar.targets www.mirbase.org...
Null hsa-miR-30c View Gene Set 3.344e-05 699 0.0002994 15 microRNA targets for hsa-miR-30c from pictar.targets www.mirbase.org...
Null hsa-miR-30d View Gene Set 2.999e-05 701 0.0002994 15 microRNA targets for hsa-miR-30d from pictar.targets www.mirbase.org...
Null hsa-miR-30e-5p View Gene Set 3.533e-05 705 0.0002994 15 microRNA targets for hsa-miR-30e-5p from pictar.targets www.mirbase.org...
Null hsa-miR-144 View Gene Set 5.796e-05 431 0.0004689 22 microRNA targets for hsa-miR-144 from pictar.targets www.mirbase.org...
Null hsa-miR-142-3p View Gene Set 9.116e-05 166 0.0007055 23 microRNA targets for hsa-miR-142-3p from pictar.targets www.mirbase.org...
Null hsa-miR-217 View Gene Set 0.000213 164 0.00158 24 microRNA targets for hsa-miR-217 from pictar.targets www.mirbase.org...
Null hsa-miR-200b View Gene Set 0.0002796 465 0.001844 25 microRNA targets for hsa-miR-200b from pictar.targets www.mirbase.org...
Null hsa-miR-200c View Gene Set 0.0002796 465 0.001844 25 microRNA targets for hsa-miR-200c from pictar.targets www.mirbase.org...
Null hsa-miR-32 View Gene Set 0.0002796 444 0.001844 25 microRNA targets for hsa-miR-32 from pictar.targets www.mirbase.org...
Null hsa-miR-1 View Gene Set 0.0004555 408 0.002895 28 microRNA targets for hsa-miR-1 from pictar.targets www.mirbase.org...
Null hsa-miR-101 View Gene Set 0.0004864 428 0.002985 29 microRNA targets for hsa-miR-101 from pictar.targets www.mirbase.org...
Null hsa-miR-206 View Gene Set 0.0005739 404 0.003405 30 microRNA targets for hsa-miR-206 from pictar.targets www.mirbase.org...
Null hsa-miR-92 View Gene Set 0.0006098 438 0.003502 31 microRNA targets for hsa-miR-92 from pictar.targets www.mirbase.org...
Null hsa-miR-25 View Gene Set 0.000715 311 0.003895 32 microRNA targets for hsa-miR-25 from pictar.targets www.mirbase.org...
Null hsa-miR-320 View Gene Set 0.0007222 405 0.003895 32 microRNA targets for hsa-miR-320 from pictar.targets www.mirbase.org...
Null hsa-miR-106b View Gene Set 0.0009339 613 0.004889 34 microRNA targets for hsa-miR-106b from pictar.targets www.mirbase.org...
Null hsa-miR-199a* View Gene Set 0.0009734 422 0.004951 35 microRNA targets for hsa-miR-199a* from pictar.targets www.mirbase.org...
Null hsa-miR-124a View Gene Set 0.001058 624 0.005197 36 microRNA targets for hsa-miR-124a from pictar.targets www.mirbase.org...
Null hsa-miR-20a View Gene Set 0.00108 611 0.005197 36 microRNA targets for hsa-miR-20a from pictar.targets www.mirbase.org...
Null hsa-miR-9* View Gene Set 0.001149 306 0.00538 38 microRNA targets for hsa-miR-9* from pictar.targets www.mirbase.org...
Null hsa-miR-142-5p View Gene Set 0.001217 308 0.005556 39 microRNA targets for hsa-miR-142-5p from pictar.targets www.mirbase.org...
Null hsa-miR-372 View Gene Set 0.001412 608 0.006281 40 microRNA targets for hsa-miR-372 from pictar.targets www.mirbase.org...
Null hsa-miR-148a View Gene Set 0.002075 342 0.008795 41 microRNA targets for hsa-miR-148a from pictar.targets www.mirbase.org...
Null hsa-miR-200a View Gene Set 0.00205 107 0.008795 41 microRNA targets for hsa-miR-200a from pictar.targets www.mirbase.org...
Null hsa-miR-152 View Gene Set 0.002273 344 0.009407 43 microRNA targets for hsa-miR-152 from pictar.targets www.mirbase.org...
Null hsa-miR-148b View Gene Set 0.002417 341 0.009562 44 microRNA targets for hsa-miR-148b from pictar.targets www.mirbase.org...
Null hsa-miR-375 View Gene Set 0.002397 166 0.009562 44 microRNA targets for hsa-miR-375 from pictar.targets www.mirbase.org...
Null hsa-miR-93 View Gene Set 0.002676 606 0.01036 46 microRNA targets for hsa-miR-93 from pictar.targets www.mirbase.org...
Null hsa-miR-20b View Gene Set 0.002943 601 0.01115 47 microRNA targets for hsa-miR-20b from pictar.targets www.mirbase.org...
Null hsa-miR-33 View Gene Set 0.003713 255 0.01377 48 microRNA targets for hsa-miR-33 from pictar.targets www.mirbase.org...
Null hsa-miR-17-5p View Gene Set 0.004476 602 0.01626 49 microRNA targets for hsa-miR-17-5p from pictar.targets www.mirbase.org...
Null hsa-miR-194 View Gene Set 0.004717 200 0.01646 50 microRNA targets for hsa-miR-194 from pictar.targets www.mirbase.org...
Null hsa-miR-302b* View Gene Set 0.004669 253 0.01646 50 microRNA targets for hsa-miR-302b* from pictar.targets www.mirbase.org...
Null hsa-miR-216 View Gene Set 0.005419 121 0.01855 52 microRNA targets for hsa-miR-216 from pictar.targets www.mirbase.org...
Null hsa-miR-129 View Gene Set 0.009301 207 0.03124 53 microRNA targets for hsa-miR-129 from pictar.targets www.mirbase.org...
Null hsa-miR-367 View Gene Set 0.009726 335 0.03206 54 microRNA targets for hsa-miR-367 from pictar.targets www.mirbase.org...
Null hsa-miR-145 View Gene Set 0.01035 245 0.03351 55 microRNA targets for hsa-miR-145 from pictar.targets www.mirbase.org...
Null hsa-miR-335 View Gene Set 0.01253 136 0.03983 56 microRNA targets for hsa-miR-335 from pictar.targets www.mirbase.org...
Null hsa-miR-137 View Gene Set 0.01314 375 0.04102 57 microRNA targets for hsa-miR-137 from pictar.targets www.mirbase.org...
Null hsa-miR-342 View Gene Set 0.014 126 0.04298 58 microRNA targets for hsa-miR-342 from pictar.targets www.mirbase.org...
Null hsa-miR-338 View Gene Set 0.01536 197 0.04634 59 microRNA targets for hsa-miR-338 from pictar.targets www.mirbase.org...
Null hsa-miR-183 View Gene Set 0.01582 233 0.04694 60 microRNA targets for hsa-miR-183 from pictar.targets www.mirbase.org...
Null hsa-let-7a View Gene Set 0.01652 554 0.04821 61 microRNA targets for hsa-let-7a from pictar.targets www.mirbase.org...

Gene Set Collection: targetscan.targets

Arguments: refPop=all, featureType=featureNames, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null hsa-miR-300 View Gene Set 1.66e-08 638 2.026e-06 1 microRNA targets for hsa-miR-300 from targetscan.targets www.mirbase.org...
Null hsa-miR-381 View Gene Set 1.66e-08 638 2.026e-06 1 microRNA targets for hsa-miR-381 from targetscan.targets www.mirbase.org...
Null hsa-miR-590-3p View Gene Set 3.574e-08 796 2.907e-06 3 microRNA targets for hsa-miR-590-3p from targetscan.targets www.mirbase.org...
Null hsa-miR-23a View Gene Set 2.479e-06 838 0.000121 4 microRNA targets for hsa-miR-23a from targetscan.targets www.mirbase.org...
Null hsa-miR-23b View Gene Set 2.479e-06 838 0.000121 4 microRNA targets for hsa-miR-23b from targetscan.targets www.mirbase.org...
Null hsa-miR-433 View Gene Set 3.585e-06 207 0.0001458 6 microRNA targets for hsa-miR-433 from targetscan.targets www.mirbase.org...
Null hsa-miR-186 View Gene Set 4.428e-06 525 0.0001543 7 microRNA targets for hsa-miR-186 from targetscan.targets www.mirbase.org...
Null hsa-miR-181a View Gene Set 7.729e-06 893 0.0001714 8 microRNA targets for hsa-miR-181a from targetscan.targets www.mirbase.org...
Null hsa-miR-181b View Gene Set 7.729e-06 893 0.0001714 8 microRNA targets for hsa-miR-181b from targetscan.targets www.mirbase.org...
Null hsa-miR-181c View Gene Set 7.729e-06 893 0.0001714 8 microRNA targets for hsa-miR-181c from targetscan.targets www.mirbase.org...
Null hsa-miR-181d View Gene Set 7.729e-06 893 0.0001714 8 microRNA targets for hsa-miR-181d from targetscan.targets www.mirbase.org...
Null hsa-miR-1297 View Gene Set 6.101e-05 646 0.0008034 12 microRNA targets for hsa-miR-1297 from targetscan.targets www.mirbase.org...
Null hsa-miR-26a View Gene Set 6.101e-05 646 0.0008034 12 microRNA targets for hsa-miR-26a from targetscan.targets www.mirbase.org...
Null hsa-miR-26b View Gene Set 6.101e-05 646 0.0008034 12 microRNA targets for hsa-miR-26b from targetscan.targets www.mirbase.org...
Null hsa-miR-30a View Gene Set 6.256e-05 1080 0.0008034 12 microRNA targets for hsa-miR-30a from targetscan.targets www.mirbase.org...
Null hsa-miR-30b View Gene Set 6.256e-05 1080 0.0008034 12 microRNA targets for hsa-miR-30b from targetscan.targets www.mirbase.org...
Null hsa-miR-30c View Gene Set 6.256e-05 1080 0.0008034 12 microRNA targets for hsa-miR-30c from targetscan.targets www.mirbase.org...
Null hsa-miR-30d View Gene Set 6.256e-05 1080 0.0008034 12 microRNA targets for hsa-miR-30d from targetscan.targets www.mirbase.org...
Null hsa-miR-30e View Gene Set 6.256e-05 1080 0.0008034 12 microRNA targets for hsa-miR-30e from targetscan.targets www.mirbase.org...
Null hsa-miR-494 View Gene Set 6.897e-05 360 0.0008414 20 microRNA targets for hsa-miR-494 from targetscan.targets www.mirbase.org...
Null hsa-miR-223 View Gene Set 9.515e-05 202 0.001106 21 microRNA targets for hsa-miR-223 from targetscan.targets www.mirbase.org...
Null hsa-miR-340 View Gene Set 0.0001856 963 0.002058 22 microRNA targets for hsa-miR-340 from targetscan.targets www.mirbase.org...
Null hsa-miR-543 View Gene Set 0.0002848 497 0.003021 23 microRNA targets for hsa-miR-543 from targetscan.targets www.mirbase.org...
Null hsa-miR-224 View Gene Set 0.0006328 236 0.006434 24 microRNA targets for hsa-miR-224 from targetscan.targets www.mirbase.org...
Null hsa-miR-217 View Gene Set 0.0006991 237 0.006823 25 microRNA targets for hsa-miR-217 from targetscan.targets www.mirbase.org...
Null hsa-miR-361-5p View Gene Set 0.001173 138 0.01101 26 microRNA targets for hsa-miR-361-5p from targetscan.targets www.mirbase.org...
Null hsa-miR-221 View Gene Set 0.001286 306 0.01121 27 microRNA targets for hsa-miR-221 from targetscan.targets www.mirbase.org...
Null hsa-miR-222 View Gene Set 0.001286 306 0.01121 27 microRNA targets for hsa-miR-222 from targetscan.targets www.mirbase.org...
Null hsa-miR-101 View Gene Set 0.001581 607 0.01331 29 microRNA targets for hsa-miR-101 from targetscan.targets www.mirbase.org...
Null hsa-miR-203 View Gene Set 0.001727 558 0.01405 30 microRNA targets for hsa-miR-203 from targetscan.targets www.mirbase.org...
Null hsa-miR-25 View Gene Set 0.004079 692 0.0269 31 microRNA targets for hsa-miR-25 from targetscan.targets www.mirbase.org...
Null hsa-miR-32 View Gene Set 0.004079 692 0.0269 31 microRNA targets for hsa-miR-32 from targetscan.targets www.mirbase.org...
Null hsa-miR-363 View Gene Set 0.004079 692 0.0269 31 microRNA targets for hsa-miR-363 from targetscan.targets www.mirbase.org...
Null hsa-miR-367 View Gene Set 0.004079 692 0.0269 31 microRNA targets for hsa-miR-367 from targetscan.targets www.mirbase.org...
Null hsa-miR-382 View Gene Set 0.003605 127 0.0269 31 microRNA targets for hsa-miR-382 from targetscan.targets www.mirbase.org...
Null hsa-miR-92a View Gene Set 0.004079 692 0.0269 31 microRNA targets for hsa-miR-92a from targetscan.targets www.mirbase.org...
Null hsa-miR-92b View Gene Set 0.004079 692 0.0269 31 microRNA targets for hsa-miR-92b from targetscan.targets www.mirbase.org...
Null hsa-miR-199a-5p View Gene Set 0.004418 375 0.02764 38 microRNA targets for hsa-miR-199a-5p from targetscan.targets www.mirbase.org...
Null hsa-miR-199b-5p View Gene Set 0.004418 375 0.02764 38 microRNA targets for hsa-miR-199b-5p from targetscan.targets www.mirbase.org...
Null hsa-miR-374a View Gene Set 0.004861 458 0.02893 40 microRNA targets for hsa-miR-374a from targetscan.targets www.mirbase.org...
Null hsa-miR-374b View Gene Set 0.004861 458 0.02893 40 microRNA targets for hsa-miR-374b from targetscan.targets www.mirbase.org...
Null hsa-miR-183 View Gene Set 0.005307 295 0.03083 42 microRNA targets for hsa-miR-183 from targetscan.targets www.mirbase.org...
Null hsa-miR-106a View Gene Set 0.008965 986 0.03788 43 microRNA targets for hsa-miR-106a from targetscan.targets www.mirbase.org...
Null hsa-miR-106b View Gene Set 0.008965 986 0.03788 43 microRNA targets for hsa-miR-106b from targetscan.targets www.mirbase.org...
Null hsa-miR-148a View Gene Set 0.008223 536 0.03788 43 microRNA targets for hsa-miR-148a from targetscan.targets www.mirbase.org...
Null hsa-miR-148b View Gene Set 0.008223 536 0.03788 43 microRNA targets for hsa-miR-148b from targetscan.targets www.mirbase.org...
Null hsa-miR-152 View Gene Set 0.008223 536 0.03788 43 microRNA targets for hsa-miR-152 from targetscan.targets www.mirbase.org...
Null hsa-miR-17 View Gene Set 0.008965 986 0.03788 43 microRNA targets for hsa-miR-17 from targetscan.targets www.mirbase.org...
Null hsa-miR-20a View Gene Set 0.008965 986 0.03788 43 microRNA targets for hsa-miR-20a from targetscan.targets www.mirbase.org...
Null hsa-miR-20b View Gene Set 0.008965 986 0.03788 43 microRNA targets for hsa-miR-20b from targetscan.targets www.mirbase.org...
Null hsa-miR-216b View Gene Set 0.009004 176 0.03788 43 microRNA targets for hsa-miR-216b from targetscan.targets www.mirbase.org...
Null hsa-miR-33a View Gene Set 0.008971 264 0.03788 43 microRNA targets for hsa-miR-33a from targetscan.targets www.mirbase.org...
Null hsa-miR-33b View Gene Set 0.008971 264 0.03788 43 microRNA targets for hsa-miR-33b from targetscan.targets www.mirbase.org...
Null hsa-miR-378 View Gene Set 0.008695 106 0.03788 43 microRNA targets for hsa-miR-378 from targetscan.targets www.mirbase.org...
Null hsa-miR-422a View Gene Set 0.008695 106 0.03788 43 microRNA targets for hsa-miR-422a from targetscan.targets www.mirbase.org...
Null hsa-miR-519d View Gene Set 0.008965 986 0.03788 43 microRNA targets for hsa-miR-519d from targetscan.targets www.mirbase.org...
Null hsa-miR-876-5p View Gene Set 0.007317 148 0.03788 43 microRNA targets for hsa-miR-876-5p from targetscan.targets www.mirbase.org...
Null hsa-miR-93 View Gene Set 0.008965 986 0.03788 43 microRNA targets for hsa-miR-93 from targetscan.targets www.mirbase.org...
Null hsa-miR-154 View Gene Set 0.01087 84 0.04495 59 microRNA targets for hsa-miR-154 from targetscan.targets www.mirbase.org...
Null hsa-miR-19a View Gene Set 0.01165 937 0.04659 60 microRNA targets for hsa-miR-19a from targetscan.targets www.mirbase.org...
Null hsa-miR-19b View Gene Set 0.01165 937 0.04659 60 microRNA targets for hsa-miR-19b from targetscan.targets www.mirbase.org...
Null hsa-miR-365 View Gene Set 0.01184 174 0.0466 62 microRNA targets for hsa-miR-365 from targetscan.targets www.mirbase.org...

Gene Set Collection: miRNAtargetIntersection

Arguments: refPop=all, featureType=featureNames, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-224 View Gene Set 7.186e-06 56 0.002952 1 microRNA targets for miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-224 from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-548a-3p View Gene Set 3.455e-06 107 0.002952 1 microRNA targets for miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-548a-3p from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirbase.targetscan.targetsIntersection.hsa-miR-181c View Gene Set 5.791e-06 85 0.002952 1 microRNA targets for miranda.mirbase.targetscan.targetsIntersection.hsa-miR-181c from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-26a View Gene Set 5.095e-06 211 0.002952 1 microRNA targets for miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-26a from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-26b View Gene Set 4.045e-06 215 0.002952 1 microRNA targets for miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-26b from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-548c-3p View Gene Set 2.701e-05 167 0.003228 6 microRNA targets for miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-548c-3p from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-558 View Gene Set 2.672e-05 15 0.003228 6 microRNA targets for miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-558 from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-607 View Gene Set 2.123e-05 80 0.003228 6 microRNA targets for miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-607 from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirbase.pictar.targetsIntersection.hsa-miR-181c View Gene Set 2.247e-05 66 0.003228 6 microRNA targets for miranda.mirbase.pictar.targetsIntersection.hsa-miR-181c from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-200c View Gene Set 2.525e-05 197 0.003228 6 microRNA targets for miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-200c from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-23a View Gene Set 2.015e-05 192 0.003228 6 microRNA targets for miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-23a from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-23b View Gene Set 2.321e-05 196 0.003228 6 microRNA targets for miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-23b from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-27a View Gene Set 1.927e-05 157 0.003228 6 microRNA targets for miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-27a from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-148a View Gene Set 1.749e-05 161 0.003228 6 microRNA targets for miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-148a from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-152 View Gene Set 2.828e-05 157 0.003228 6 microRNA targets for miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-152 from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-23a View Gene Set 1.168e-05 316 0.003228 6 microRNA targets for miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-23a from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-23b View Gene Set 1.642e-05 324 0.003228 6 microRNA targets for miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-23b from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-590-3p View Gene Set 1.092e-05 406 0.003228 6 microRNA targets for miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-590-3p from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-148a View Gene Set 3.267e-05 113 0.003355 19 microRNA targets for miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-148a from miRNAtargetIntersection www.mirbase.org...
Null mirtarget2.pictar.targetscan.targetsIntersection.hsa-miR-26a View Gene Set 3.167e-05 153 0.003355 19 microRNA targets for mirtarget2.pictar.targetscan.targetsIntersection.hsa-miR-26a from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-148b View Gene Set 3.636e-05 114 0.003445 21 microRNA targets for miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-148b from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-130b View Gene Set 3.791e-05 254 0.003445 21 microRNA targets for miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-130b from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-222 View Gene Set 3.858e-05 75 0.003445 21 microRNA targets for miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-222 from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-338-5p View Gene Set 4.598e-05 134 0.003786 24 microRNA targets for miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-338-5p from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirbase.pictar.targetsIntersection.hsa-miR-181a View Gene Set 4.766e-05 68 0.003786 24 microRNA targets for miranda.mirbase.pictar.targetsIntersection.hsa-miR-181a from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-148b View Gene Set 4.792e-05 162 0.003786 24 microRNA targets for miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-148b from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-181c View Gene Set 6.201e-05 120 0.003884 27 microRNA targets for miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-181c from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-152 View Gene Set 5.531e-05 110 0.003884 27 microRNA targets for miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-152 from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-93 View Gene Set 6.43e-05 258 0.003884 27 microRNA targets for miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-93 from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-300 View Gene Set 5.874e-05 164 0.003884 27 microRNA targets for miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-300 from miRNAtargetIntersection www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsIntersection.hsa-miR-181b View Gene Set 5.73e-05 71 0.003884 27 microRNA targets for mirbase.mirtarget2.targetscan.targetsIntersection.hsa-miR-181b from miRNAtargetIntersection www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsIntersection.hsa-miR-181c View Gene Set 6.37e-05 73 0.003884 27 microRNA targets for mirbase.mirtarget2.targetscan.targetsIntersection.hsa-miR-181c from miRNAtargetIntersection www.mirbase.org...
Null mirtarget2.pictar.targetscan.targetsIntersection.hsa-miR-221 View Gene Set 5.365e-05 46 0.003884 27 microRNA targets for mirtarget2.pictar.targetscan.targetsIntersection.hsa-miR-221 from miRNAtargetIntersection www.mirbase.org...
Null mirtarget2.pictar.targetscan.targetsIntersection.hsa-miR-26b View Gene Set 5.386e-05 156 0.003884 27 microRNA targets for mirtarget2.pictar.targetscan.targetsIntersection.hsa-miR-26b from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-495 View Gene Set 6.819e-05 156 0.003886 35 microRNA targets for miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-495 from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-381 View Gene Set 7.378e-05 168 0.003886 35 microRNA targets for miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-381 from miRNAtargetIntersection www.mirbase.org...
Null mirtarget2.pictar.targetscan.targetsIntersection.hsa-miR-148a View Gene Set 6.844e-05 113 0.003886 35 microRNA targets for mirtarget2.pictar.targetscan.targetsIntersection.hsa-miR-148a from miRNAtargetIntersection www.mirbase.org...
Null mirtarget2.pictar.targetscan.targetsIntersection.hsa-miR-152 View Gene Set 7.234e-05 109 0.003886 35 microRNA targets for mirtarget2.pictar.targetscan.targetsIntersection.hsa-miR-152 from miRNAtargetIntersection www.mirbase.org...
Null mirtarget2.pictar.targetscan.targetsIntersection.hsa-miR-23b View Gene Set 7.236e-05 186 0.003886 35 microRNA targets for mirtarget2.pictar.targetscan.targetsIntersection.hsa-miR-23b from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-802 View Gene Set 7.926e-05 66 0.003939 40 microRNA targets for miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-802 from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-22 View Gene Set 7.695e-05 71 0.003939 40 microRNA targets for miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-22 from miRNAtargetIntersection www.mirbase.org...
Null mirtarget2.pictar.targetscan.targetsIntersection.hsa-miR-23a View Gene Set 8.054e-05 181 0.003939 40 microRNA targets for mirtarget2.pictar.targetscan.targetsIntersection.hsa-miR-23a from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-890 View Gene Set 8.691e-05 33 0.004152 43 microRNA targets for miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-890 from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-20a View Gene Set 9.036e-05 268 0.004218 44 microRNA targets for miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-20a from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-200a View Gene Set 9.661e-05 118 0.004222 45 microRNA targets for miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-200a from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-221 View Gene Set 9.468e-05 78 0.004222 45 microRNA targets for miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-221 from miRNAtargetIntersection www.mirbase.org...
Null miranda.pictar.targetscan.targetsIntersection.hsa-miR-1 View Gene Set 9.332e-05 203 0.004222 45 microRNA targets for miranda.pictar.targetscan.targetsIntersection.hsa-miR-1 from miRNAtargetIntersection www.mirbase.org...
Null miranda.pictar.targetscan.targetsIntersection.hsa-miR-23b View Gene Set 0.0001015 253 0.004343 48 microRNA targets for miranda.pictar.targetscan.targetsIntersection.hsa-miR-23b from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-433 View Gene Set 0.0001059 63 0.004441 49 microRNA targets for miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-433 from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-543 View Gene Set 0.0001101 175 0.004524 50 microRNA targets for miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-543 from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-20a View Gene Set 0.0001176 390 0.004736 51 microRNA targets for miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-20a from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-186 View Gene Set 0.0001217 194 0.004806 52 microRNA targets for miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-186 from miRNAtargetIntersection www.mirbase.org...
Null mirtarget2.pictar.targetscan.targetsIntersection.hsa-miR-148b View Gene Set 0.0001368 112 0.0053 53 microRNA targets for mirtarget2.pictar.targetscan.targetsIntersection.hsa-miR-148b from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-142-5p View Gene Set 0.0001515 117 0.005761 54 microRNA targets for miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-142-5p from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-590-3p View Gene Set 0.0001595 181 0.00585 55 microRNA targets for miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-590-3p from miRNAtargetIntersection www.mirbase.org...
Null miranda.pictar.targetscan.targetsIntersection.hsa-miR-23a View Gene Set 0.0001588 254 0.00585 55 microRNA targets for miranda.pictar.targetscan.targetsIntersection.hsa-miR-23a from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-323-3p View Gene Set 0.0001643 73 0.005919 57 microRNA targets for miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-323-3p from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-200b View Gene Set 0.0001712 202 0.006064 58 microRNA targets for miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-200b from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-186 View Gene Set 0.0001845 117 0.006424 59 microRNA targets for miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-186 from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-106b View Gene Set 0.0002034 257 0.006739 60 microRNA targets for miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-106b from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-27b View Gene Set 0.0002004 157 0.006739 60 microRNA targets for miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-27b from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-30a View Gene Set 0.0002003 377 0.006739 60 microRNA targets for miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-30a from miRNAtargetIntersection www.mirbase.org...
Null miranda.pictar.targetscan.targetsIntersection.hsa-miR-223 View Gene Set 0.0002069 51 0.006744 63 microRNA targets for miranda.pictar.targetscan.targetsIntersection.hsa-miR-223 from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-26a View Gene Set 0.0002142 153 0.006874 64 microRNA targets for miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-26a from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-454 View Gene Set 0.0002271 257 0.007175 65 microRNA targets for miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-454 from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-155 View Gene Set 0.0002358 58 0.007189 66 microRNA targets for miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-155 from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirbase.pictar.targetsIntersection.hsa-miR-217 View Gene Set 0.0002318 33 0.007189 66 microRNA targets for miranda.mirbase.pictar.targetsIntersection.hsa-miR-217 from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirbase.targetscan.targetsIntersection.hsa-miR-186 View Gene Set 0.0002403 31 0.007189 66 microRNA targets for miranda.mirbase.targetscan.targetsIntersection.hsa-miR-186 from miRNAtargetIntersection www.mirbase.org...
Null miranda.pictar.targetscan.targetsIntersection.hsa-miR-302a View Gene Set 0.0002415 192 0.007189 66 microRNA targets for miranda.pictar.targetscan.targetsIntersection.hsa-miR-302a from miRNAtargetIntersection www.mirbase.org...
Null miranda.pictar.targetscan.targetsIntersection.hsa-miR-26b View Gene Set 0.0002522 210 0.007296 70 microRNA targets for miranda.pictar.targetscan.targetsIntersection.hsa-miR-26b from miRNAtargetIntersection www.mirbase.org...
Null miranda.pictar.targetscan.targetsIntersection.hsa-miR-372 View Gene Set 0.0002503 197 0.007296 70 microRNA targets for miranda.pictar.targetscan.targetsIntersection.hsa-miR-372 from miRNAtargetIntersection www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsIntersection.hsa-miR-15a View Gene Set 0.0002605 64 0.007432 72 microRNA targets for mirbase.mirtarget2.pictar.targetsIntersection.hsa-miR-15a from miRNAtargetIntersection www.mirbase.org...
Null miranda.pictar.targetscan.targetsIntersection.hsa-miR-26a View Gene Set 0.0002681 202 0.007544 73 microRNA targets for miranda.pictar.targetscan.targetsIntersection.hsa-miR-26a from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-569 View Gene Set 0.0003014 31 0.008366 74 microRNA targets for miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-569 from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-101 View Gene Set 0.0003227 193 0.00872 75 microRNA targets for miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-101 from miRNAtargetIntersection www.mirbase.org...
Null miranda.pictar.targetscan.targetsIntersection.hsa-miR-206 View Gene Set 0.0003221 198 0.00872 75 microRNA targets for miranda.pictar.targetscan.targetsIntersection.hsa-miR-206 from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-26b View Gene Set 0.0003689 156 0.009354 77 microRNA targets for miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-26b from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-130a View Gene Set 0.0003621 254 0.009354 77 microRNA targets for miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-130a from miRNAtargetIntersection www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsIntersection.hsa-miR-181a View Gene Set 0.0003555 46 0.009354 77 microRNA targets for mirbase.mirtarget2.pictar.targetsIntersection.hsa-miR-181a from miRNAtargetIntersection www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsIntersection.hsa-miR-181a View Gene Set 0.0003537 63 0.009354 77 microRNA targets for mirbase.mirtarget2.targetscan.targetsIntersection.hsa-miR-181a from miRNAtargetIntersection www.mirbase.org...
Null mirtarget2.pictar.targetscan.targetsIntersection.hsa-miR-20a View Gene Set 0.0003684 290 0.009354 77 microRNA targets for mirtarget2.pictar.targetscan.targetsIntersection.hsa-miR-20a from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirbase.targetscan.targetsIntersection.hsa-miR-181a View Gene Set 0.0003816 91 0.009558 82 microRNA targets for miranda.mirbase.targetscan.targetsIntersection.hsa-miR-181a from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-106b View Gene Set 0.0004037 372 0.009989 83 microRNA targets for miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-106b from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-181a View Gene Set 0.0004345 113 0.01047 84 microRNA targets for miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-181a from miRNAtargetIntersection www.mirbase.org...
Null miranda.pictar.targetscan.targetsIntersection.hsa-miR-196a View Gene Set 0.0004435 74 0.01047 84 microRNA targets for miranda.pictar.targetscan.targetsIntersection.hsa-miR-196a from miRNAtargetIntersection www.mirbase.org...
Null miranda.pictar.targetscan.targetsIntersection.hsa-miR-196b