Results

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JumpToCollection
Go to: Gene Set Collection: KEGG
Go to: Gene Set Collection: GO
Go to: Gene Set Collection: Broad.c1.CYTOBAND
Go to: Gene Set Collection: Broad.c2.CGP
Go to: Gene Set Collection: Broad.c2.CP.KEGG
Go to: Gene Set Collection: Broad.c2.CP.REACTOME
Go to: Gene Set Collection: Broad.c3.MIR
Go to: Gene Set Collection: Broad.c3.TFT
Go to: Gene Set Collection: Broad.c4.CGN
Go to: Gene Set Collection: Broad.c4.CM
Go to: Gene Set Collection: Broad.c5.BP
Go to: Gene Set Collection: Broad.c5.CC
Go to: Gene Set Collection: Broad.c5.MF
Go to: Gene Set Collection: PMID
Go to: Gene Set Collection: ChromosomalTiles5Mb
Go to: Gene Set Collection: Prosite
Go to: Gene Set Collection: Enzyme
Go to: Gene Set Collection: ppi.BioGRID
Go to: Gene Set Collection: ppi.anyDB
Go to: Gene Set Collection: pathwayCommons.cell-map
Go to: Gene Set Collection: pathwayCommons.nci-nature
Go to: Gene Set Collection: pathwayCommons.reactome
Go to: Gene Set Collection: miranda.targets
Go to: Gene Set Collection: mirbase.targets
Go to: Gene Set Collection: mirtarget2.targets
Go to: Gene Set Collection: pictar.targets
Go to: Gene Set Collection: tarbase.targets
Go to: Gene Set Collection: targetscan.targets
Go to: Gene Set Collection: miRNAtargetIntersection
Go to: Gene Set Collection: miRNAtargetUnion
Go to: Gene Set Collection: hprdBatch.UP
Go to: Gene Set Collection: hprdBatch.DIFFERENT

AFA results for: BATCH.ls

Click on the heading for any column to sort by that column.

Gene Set Collection: KEGG

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
KEGG 04110 View Gene Set 2.203e-07 128 4.713e-05 1 Cell cycle www.genome.jp/d...
KEGG 03018 View Gene Set 2.375e-05 59 0.002541 2 RNA degradation www.genome.jp/d...
KEGG 03040 View Gene Set 4.195e-05 128 0.002992 3 Spliceosome www.genome.jp/d...
KEGG 04120 View Gene Set 0.0001143 139 0.006115 4 Ubiquitin mediated proteolysis www.genome.jp/d...
KEGG 04141 View Gene Set 0.0007913 167 0.03387 5 Protein processing in endoplasmic reticulum www.genome.jp/d...
KEGG 03420 View Gene Set 0.001112 44 0.03954 6 Nucleotide excision repair www.genome.jp/d...
KEGG 04130 View Gene Set 0.001293 36 0.03954 6 SNARE interactions in vesicular transport www.genome.jp/d...

Gene Set Collection: GO

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
GO GO:0043229 View Gene Set 1.037e-52 9346 1.386e-48 1 intracellular organelle amigo.geneontol...
GO GO:0043231 View Gene Set 2.677e-52 8376 1.788e-48 2 intracellular membrane-bounded organelle amigo.geneontol...
GO GO:0043227 View Gene Set 6.296e-52 8383 2.804e-48 3 membrane-bounded organelle amigo.geneontol...
GO GO:0043226 View Gene Set 9.162e-52 9360 3.06e-48 4 organelle amigo.geneontol...
GO GO:0005634 View Gene Set 1.023e-48 5198 2.734e-45 5 nucleus amigo.geneontol...
GO GO:0044424 View Gene Set 6.951e-48 10976 1.548e-44 6 intracellular part amigo.geneontol...
GO GO:0005622 View Gene Set 3.062e-46 11329 5.844e-43 7 intracellular amigo.geneontol...
GO GO:0044446 View Gene Set 1.329e-35 5019 2.219e-32 8 intracellular organelle part amigo.geneontol...
GO GO:0044428 View Gene Set 1.007e-34 1938 1.495e-31 9 nuclear part amigo.geneontol...
GO GO:0044422 View Gene Set 7.64e-34 5089 1.021e-30 10 organelle part amigo.geneontol...
GO GO:0044260 View Gene Set 7.661e-33 5699 9.305e-30 11 cellular macromolecule metabolic process amigo.geneontol...
GO GO:0070013 View Gene Set 6.298e-31 1845 7.012e-28 12 intracellular organelle lumen amigo.geneontol...
GO GO:0003676 View Gene Set 2.619e-30 2979 2.691e-27 13 nucleic acid binding amigo.geneontol...
GO GO:0031974 View Gene Set 3.304e-30 1917 3.153e-27 14 membrane-enclosed lumen amigo.geneontol...
GO GO:0031981 View Gene Set 8.443e-30 1518 7.52e-27 15 nuclear lumen amigo.geneontol...
GO GO:0043233 View Gene Set 7.985e-29 1881 6.668e-26 16 organelle lumen amigo.geneontol...
GO GO:0090304 View Gene Set 1.291e-27 3724 1.014e-24 17 nucleic acid metabolic process amigo.geneontol...
GO GO:0005654 View Gene Set 1.978e-23 939 1.468e-20 18 nucleoplasm amigo.geneontol...
GO GO:0006139 View Gene Set 6.039e-22 4294 4.246e-19 19 nucleobase nucleoside nucleotide and nucleic acid metabolic process amigo.geneontol...
GO GO:0044237 View Gene Set 1.002e-21 7431 6.696e-19 20 cellular metabolic process amigo.geneontol...
GO GO:0034645 View Gene Set 2.822e-21 3529 1.796e-18 21 cellular macromolecule biosynthetic process amigo.geneontol...
GO GO:0010467 View Gene Set 1.151e-20 3806 6.992e-18 22 gene expression amigo.geneontol...
GO GO:0043170 View Gene Set 1.449e-20 6274 8.418e-18 23 macromolecule metabolic process amigo.geneontol...
GO GO:0009059 View Gene Set 4.299e-20 3597 2.393e-17 24 macromolecule biosynthetic process amigo.geneontol...
GO GO:0034641 View Gene Set 2.43e-18 4584 1.299e-15 25 cellular nitrogen compound metabolic process amigo.geneontol...
GO GO:0003723 View Gene Set 6.033e-18 732 3.1e-15 26 RNA binding amigo.geneontol...
GO GO:0043228 View Gene Set 1.259e-17 2690 6.005e-15 27 non-membrane-bounded organelle amigo.geneontol...
GO GO:0043232 View Gene Set 1.259e-17 2690 6.005e-15 27 intracellular non-membrane-bounded organelle amigo.geneontol...
GO GO:0006807 View Gene Set 4.499e-17 4698 2.073e-14 29 nitrogen compound metabolic process amigo.geneontol...
GO GO:0006396 View Gene Set 9.574e-16 578 4.264e-13 30 RNA processing amigo.geneontol...
GO GO:0005694 View Gene Set 1.046e-15 507 4.508e-13 31 chromosome amigo.geneontol...
GO GO:0006259 View Gene Set 1.09e-15 592 4.549e-13 32 DNA metabolic process amigo.geneontol...
GO GO:0016070 View Gene Set 2.259e-15 2596 9.145e-13 33 RNA metabolic process amigo.geneontol...
GO GO:0032991 View Gene Set 3.144e-15 3237 1.236e-12 34 macromolecular complex amigo.geneontol...
GO GO:0044451 View Gene Set 3.692e-15 600 1.409e-12 35 nucleoplasm part amigo.geneontol...
GO GO:0007049 View Gene Set 5.154e-15 1006 1.913e-12 36 cell cycle amigo.geneontol...
GO GO:0044249 View Gene Set 5.454e-14 4326 1.97e-11 37 cellular biosynthetic process amigo.geneontol...
GO GO:0044427 View Gene Set 5.711e-14 420 2.008e-11 38 chromosomal part amigo.geneontol...
GO GO:0005730 View Gene Set 6.974e-14 734 2.389e-11 39 nucleolus amigo.geneontol...
GO GO:0051301 View Gene Set 1.268e-13 358 4.236e-11 40 cell division amigo.geneontol...
GO GO:0008380 View Gene Set 1.56e-13 300 5.082e-11 41 RNA splicing amigo.geneontol...
GO GO:0005737 View Gene Set 7.884e-13 7676 2.508e-10 42 cytoplasm amigo.geneontol...
GO GO:0016874 View Gene Set 9.273e-13 436 2.881e-10 43 ligase activity amigo.geneontol...
GO GO:0009058 View Gene Set 1.581e-12 4436 4.8e-10 44 biosynthetic process amigo.geneontol...
GO GO:0010556 View Gene Set 3.924e-12 2901 1.165e-09 45 regulation of macromolecule biosynthetic process amigo.geneontol...
GO GO:0000775 View Gene Set 6.235e-12 146 1.811e-09 46 chromosome centromeric region amigo.geneontol...
GO GO:0044238 View Gene Set 1.092e-11 7629 3.105e-09 47 primary metabolic process amigo.geneontol...
GO GO:0006281 View Gene Set 1.132e-11 309 3.152e-09 48 DNA repair amigo.geneontol...
GO GO:0022402 View Gene Set 4.071e-11 676 1.094e-08 49 cell cycle process amigo.geneontol...
GO GO:0003677 View Gene Set 4.093e-11 2028 1.094e-08 49 DNA binding amigo.geneontol...
GO GO:0022403 View Gene Set 4.797e-11 522 1.256e-08 51 cell cycle phase amigo.geneontol...
GO GO:0030529 View Gene Set 6.274e-11 504 1.612e-08 52 ribonucleoprotein complex amigo.geneontol...
GO GO:0006974 View Gene Set 7.417e-11 412 1.87e-08 53 response to DNA damage stimulus amigo.geneontol...
GO GO:0060255 View Gene Set 1.95e-10 3411 4.825e-08 54 regulation of macromolecule metabolic process amigo.geneontol...
GO GO:0006397 View Gene Set 2.379e-10 317 5.78e-08 55 mRNA processing amigo.geneontol...
GO GO:0000278 View Gene Set 2.49e-10 489 5.837e-08 56 mitotic cell cycle amigo.geneontol...
GO GO:0000279 View Gene Set 2.477e-10 406 5.837e-08 56 M phase amigo.geneontol...
GO GO:0006260 View Gene Set 2.677e-10 239 6.167e-08 58 DNA replication amigo.geneontol...
GO GO:0008152 View Gene Set 2.922e-10 8439 6.616e-08 59 metabolic process amigo.geneontol...
GO GO:0016879 View Gene Set 4.31e-10 273 9.598e-08 60 ligase activity forming carbon-nitrogen bonds amigo.geneontol...
GO GO:0005819 View Gene Set 4.465e-10 167 9.778e-08 61 spindle amigo.geneontol...
GO GO:0010468 View Gene Set 6.44e-10 2958 1.388e-07 62 regulation of gene expression amigo.geneontol...
GO GO:0000226 View Gene Set 6.964e-10 178 1.477e-07 63 microtubule cytoskeleton organization amigo.geneontol...
GO GO:0000776 View Gene Set 1.037e-09 92 2.166e-07 64 kinetochore amigo.geneontol...
GO GO:0048285 View Gene Set 1.128e-09 286 2.318e-07 65 organelle fission amigo.geneontol...
GO GO:0006350 View Gene Set 1.362e-09 2744 2.757e-07 66 transcription amigo.geneontol...
GO GO:0000087 View Gene Set 1.526e-09 286 3.044e-07 67 M phase of mitotic cell cycle amigo.geneontol...
GO GO:0000280 View Gene Set 1.867e-09 276 3.564e-07 68 nuclear division amigo.geneontol...
GO GO:0007067 View Gene Set 1.867e-09 276 3.564e-07 68 mitosis amigo.geneontol...
GO GO:0043234 View Gene Set 1.816e-09 2680 3.564e-07 68 protein complex amigo.geneontol...
GO GO:0006412 View Gene Set 4.258e-09 412 8.012e-07 71 translation amigo.geneontol...
GO GO:0006996 View Gene Set 4.402e-09 1501 8.168e-07 72 organelle organization amigo.geneontol...
GO GO:0033554 View Gene Set 4.69e-09 698 8.583e-07 73 cellular response to stress amigo.geneontol...
GO GO:0044267 View Gene Set 7.514e-09 2465 1.354e-06 74 cellular protein metabolic process amigo.geneontol...
GO GO:0045449 View Gene Set 7.601e-09 2647 1.354e-06 74 regulation of transcription amigo.geneontol...
GO GO:0044444 View Gene Set 7.7e-09 5184 1.354e-06 74 cytoplasmic part amigo.geneontol...
GO GO:0005739 View Gene Set 8.617e-09 1274 1.495e-06 77 mitochondrion amigo.geneontol...
GO GO:0000166 View Gene Set 9.717e-09 2257 1.664e-06 78 nucleotide binding amigo.geneontol...
GO GO:0016071 View Gene Set 1.043e-08 381 1.763e-06 79 mRNA metabolic process amigo.geneontol...
GO GO:0006261 View Gene Set 1.202e-08 74 2.008e-06 80 DNA-dependent DNA replication amigo.geneontol...
GO GO:0070647 View Gene Set 2.246e-08 356 3.705e-06 81 protein modification by small protein conjugation or removal amigo.geneontol...
GO GO:0016881 View Gene Set 2.452e-08 245 3.994e-06 82 acid-amino acid ligase activity amigo.geneontol...
GO GO:0032446 View Gene Set 2.78e-08 310 4.475e-06 83 protein modification by small protein conjugation amigo.geneontol...
GO GO:0019787 View Gene Set 2.98e-08 210 4.74e-06 84 small conjugating protein ligase activity amigo.geneontol...
GO GO:0015630 View Gene Set 3.573e-08 587 5.615e-06 85 microtubule cytoskeleton amigo.geneontol...
GO GO:0031967 View Gene Set 5.236e-08 672 8.135e-06 86 organelle envelope amigo.geneontol...
GO GO:0031326 View Gene Set 5.99e-08 3048 9.199e-06 87 regulation of cellular biosynthetic process amigo.geneontol...
GO GO:0046907 View Gene Set 7.725e-08 753 1.173e-05 88 intracellular transport amigo.geneontol...
GO GO:0000777 View Gene Set 8.681e-08 74 1.303e-05 89 condensed chromosome kinetochore amigo.geneontol...
GO GO:0009889 View Gene Set 9.438e-08 3070 1.401e-05 90 regulation of biosynthetic process amigo.geneontol...
GO GO:0016604 View Gene Set 9.793e-08 198 1.438e-05 91 nuclear body amigo.geneontol...
GO GO:0000779 View Gene Set 1.14e-07 79 1.655e-05 92 condensed chromosome centromeric region amigo.geneontol...
GO GO:0000075 View Gene Set 1.986e-07 109 2.852e-05 93 cell cycle checkpoint amigo.geneontol...
GO GO:0017111 View Gene Set 2.181e-07 733 3.1e-05 94 nucleoside-triphosphatase activity amigo.geneontol...
GO GO:0016818 View Gene Set 2.346e-07 765 3.299e-05 95 hydrolase activity acting on acid anhydrides in phosphorus-containing anhydrides amigo.geneontol...
GO GO:0016817 View Gene Set 3.103e-07 769 4.318e-05 96 hydrolase activity acting on acid anhydrides amigo.geneontol...
GO GO:0016462 View Gene Set 3.4e-07 762 4.682e-05 97 pyrophosphatase activity amigo.geneontol...
GO GO:0051276 View Gene Set 3.637e-07 548 4.958e-05 98 chromosome organization amigo.geneontol...
GO GO:0031975 View Gene Set 4.142e-07 685 5.589e-05 99 envelope amigo.geneontol...
GO GO:0080090 View Gene Set 4.424e-07 3585 5.91e-05 100 regulation of primary metabolic process amigo.geneontol...
GO GO:0045184 View Gene Set 4.627e-07 904 6.121e-05 101 establishment of protein localization amigo.geneontol...
GO GO:0005815 View Gene Set 4.849e-07 277 6.351e-05 102 microtubule organizing center amigo.geneontol...
GO GO:0008104 View Gene Set 4.985e-07 1048 6.466e-05 103 protein localization amigo.geneontol...
GO GO:0019219 View Gene Set 5.902e-07 3040 7.581e-05 104 regulation of nucleobase nucleoside nucleotide and nucleic acid metabolic process amigo.geneontol...
GO GO:0016567 View Gene Set 6.757e-07 286 8.598e-05 105 protein ubiquitination amigo.geneontol...
GO GO:0000793 View Gene Set 8.01e-07 136 0.000101 106 condensed chromosome amigo.geneontol...
GO GO:0015031 View Gene Set 8.095e-07 888 0.0001011 107 protein transport amigo.geneontol...
GO GO:0006511 View Gene Set 1.009e-06 296 0.0001248 108 ubiquitin-dependent protein catabolic process amigo.geneontol...
GO GO:0044429 View Gene Set 1.036e-06 619 0.000127 109 mitochondrial part amigo.geneontol...
GO GO:0031323 View Gene Set 1.081e-06 3768 0.0001313 110 regulation of cellular metabolic process amigo.geneontol...
GO GO:0004842 View Gene Set 1.122e-06 191 0.000135 111 ubiquitin-protein ligase activity amigo.geneontol...
GO GO:0044265 View Gene Set 1.38e-06 479 0.0001646 112 cellular macromolecule catabolic process amigo.geneontol...
GO GO:0019941 View Gene Set 1.535e-06 302 0.0001799 113 modification-dependent protein catabolic process amigo.geneontol...
GO GO:0043632 View Gene Set 1.535e-06 302 0.0001799 113 modification-dependent macromolecule catabolic process amigo.geneontol...
GO GO:0033036 View Gene Set 2.295e-06 1256 0.0002667 115 macromolecule localization amigo.geneontol...
GO GO:0022613 View Gene Set 2.633e-06 194 0.0003032 116 ribonucleoprotein complex biogenesis amigo.geneontol...
GO GO:0051171 View Gene Set 2.664e-06 3066 0.0003042 117 regulation of nitrogen compound metabolic process amigo.geneontol...
GO GO:0006403 View Gene Set 3.41e-06 104 0.0003861 118 RNA localization amigo.geneontol...
GO GO:0000377 View Gene Set 4.888e-06 97 0.0005442 119 RNA splicing via transesterification reactions with bulged adenosine as nucleophile amigo.geneontol...
GO GO:0000398 View Gene Set 4.888e-06 97 0.0005442 119 nuclear mRNA splicing via spliceosome amigo.geneontol...
GO GO:0070727 View Gene Set 5.337e-06 503 0.0005893 121 cellular macromolecule localization amigo.geneontol...
GO GO:0050657 View Gene Set 5.742e-06 102 0.0006186 122 nucleic acid transport amigo.geneontol...
GO GO:0050658 View Gene Set 5.742e-06 102 0.0006186 122 RNA transport amigo.geneontol...
GO GO:0051236 View Gene Set 5.742e-06 102 0.0006186 122 establishment of RNA localization amigo.geneontol...
GO GO:0006352 View Gene Set 6.461e-06 91 0.0006905 125 transcription initiation amigo.geneontol...
GO GO:0034613 View Gene Set 6.846e-06 501 0.0007259 126 cellular protein localization amigo.geneontol...
GO GO:0007051 View Gene Set 7.488e-06 57 0.0007877 127 spindle organization amigo.geneontol...
GO GO:0005876 View Gene Set 7.897e-06 35 0.0008243 128 spindle microtubule amigo.geneontol...
GO GO:0005635 View Gene Set 9.368e-06 234 0.0009702 129 nuclear envelope amigo.geneontol...
GO GO:0007017 View Gene Set 1.045e-05 281 0.001074 130 microtubule-based process amigo.geneontol...
GO GO:0008270 View Gene Set 1.083e-05 2009 0.001105 131 zinc ion binding amigo.geneontol...
GO GO:0006367 View Gene Set 1.223e-05 75 0.001238 132 transcription initiation from RNA polymerase II promoter amigo.geneontol...
GO GO:0031023 View Gene Set 1.26e-05 41 0.001256 133 microtubule organizing center organization amigo.geneontol...
GO GO:0051028 View Gene Set 1.253e-05 90 0.001256 133 mRNA transport amigo.geneontol...
GO GO:0032774 View Gene Set 1.328e-05 1953 0.001305 135 RNA biosynthetic process amigo.geneontol...
GO GO:0004386 View Gene Set 1.328e-05 144 0.001305 135 helicase activity amigo.geneontol...
GO GO:0000375 View Gene Set 1.513e-05 106 0.001475 137 RNA splicing via transesterification reactions amigo.geneontol...
GO GO:0006351 View Gene Set 1.541e-05 1949 0.001487 138 transcription DNA-dependent amigo.geneontol...
GO GO:0016607 View Gene Set 1.547e-05 116 0.001487 138 nuclear speck amigo.geneontol...
GO GO:0022618 View Gene Set 1.602e-05 76 0.001528 140 ribonucleoprotein complex assembly amigo.geneontol...
GO GO:0008094 View Gene Set 1.639e-05 61 0.001553 141 DNA-dependent ATPase activity amigo.geneontol...
GO GO:0006310 View Gene Set 1.724e-05 130 0.001622 142 DNA recombination amigo.geneontol...
GO GO:0005681 View Gene Set 2.139e-05 135 0.001999 143 spliceosomal complex amigo.geneontol...
GO GO:0006270 View Gene Set 2.247e-05 26 0.002084 144 DNA-dependent DNA replication initiation amigo.geneontol...
GO GO:0005829 View Gene Set 2.262e-05 1323 0.002084 144 cytosol amigo.geneontol...
GO GO:0051297 View Gene Set 2.282e-05 40 0.002088 146 centrosome organization amigo.geneontol...
GO GO:0051252 View Gene Set 2.436e-05 1869 0.002214 147 regulation of RNA metabolic process amigo.geneontol...
GO GO:0006302 View Gene Set 2.767e-05 65 0.002473 148 double-strand break repair amigo.geneontol...
GO GO:0032553 View Gene Set 2.777e-05 1851 0.002473 148 ribonucleotide binding amigo.geneontol...
GO GO:0032555 View Gene Set 2.777e-05 1851 0.002473 148 purine ribonucleotide binding amigo.geneontol...
GO GO:0000151 View Gene Set 2.853e-05 132 0.002524 151 ubiquitin ligase complex amigo.geneontol...
GO GO:0016887 View Gene Set 3.029e-05 339 0.002662 152 ATPase activity amigo.geneontol...
GO GO:0070925 View Gene Set 3.128e-05 57 0.002732 153 organelle assembly amigo.geneontol...
GO GO:0019222 View Gene Set 3.542e-05 4060 0.003073 154 regulation of metabolic process amigo.geneontol...
GO GO:0000245 View Gene Set 4.172e-05 34 0.003596 155 spliceosome assembly amigo.geneontol...
GO GO:0009057 View Gene Set 4.203e-05 570 0.0036 156 macromolecule catabolic process amigo.geneontol...
GO GO:0007059 View Gene Set 4.585e-05 94 0.003902 157 chromosome segregation amigo.geneontol...
GO GO:0008156 View Gene Set 4.647e-05 34 0.003904 158 negative regulation of DNA replication amigo.geneontol...
GO GO:0051603 View Gene Set 4.637e-05 346 0.003904 158 proteolysis involved in cellular protein catabolic process amigo.geneontol...
GO GO:0044257 View Gene Set 5.13e-05 349 0.004284 160 cellular protein catabolic process amigo.geneontol...
GO GO:0006886 View Gene Set 5.564e-05 439 0.004561 161 intracellular protein transport amigo.geneontol...
GO GO:0007098 View Gene Set 5.565e-05 26 0.004561 161 centrosome cycle amigo.geneontol...
GO GO:0005488 View Gene Set 5.502e-05 12334 0.004561 161 binding amigo.geneontol...
GO GO:0005643 View Gene Set 6.092e-05 71 0.004963 164 nuclear pore amigo.geneontol...
GO GO:0051726 View Gene Set 7.76e-05 451 0.006249 165 regulation of cell cycle amigo.geneontol...
GO GO:0090329 View Gene Set 7.765e-05 18 0.006249 165 regulation of DNA-dependent DNA replication amigo.geneontol...
GO GO:0006355 View Gene Set 8.59e-05 1820 0.006872 167 regulation of transcription DNA-dependent amigo.geneontol...
GO GO:0042623 View Gene Set 8.668e-05 273 0.006893 168 ATPase activity coupled amigo.geneontol...
GO GO:0017076 View Gene Set 8.757e-05 1934 0.006922 169 purine nucleotide binding amigo.geneontol...
GO GO:0008135 View Gene Set 9.412e-05 86 0.007397 170 translation factor activity nucleic acid binding amigo.geneontol...
GO GO:0071103 View Gene Set 9.671e-05 140 0.007556 171 DNA conformation change amigo.geneontol...
GO GO:0016591 View Gene Set 0.0001021 77 0.007934 172 DNA-directed RNA polymerase II holoenzyme amigo.geneontol...
GO GO:0007093 View Gene Set 0.0001203 52 0.009293 173 mitotic cell cycle checkpoint amigo.geneontol...
GO GO:0030496 View Gene Set 0.0001274 28 0.009785 174 midbody amigo.geneontol...
GO GO:0007052 View Gene Set 0.0001316 22 0.01005 175 mitotic spindle organization amigo.geneontol...
GO GO:0051188 View Gene Set 0.0001325 112 0.01005 176 cofactor biosynthetic process amigo.geneontol...
GO GO:0051053 View Gene Set 0.0001352 46 0.01021 177 negative regulation of DNA metabolic process amigo.geneontol...
GO GO:0005813 View Gene Set 0.0001462 166 0.01097 178 centrosome amigo.geneontol...
GO GO:0005840 View Gene Set 0.0001531 198 0.01142 179 ribosome amigo.geneontol...
GO GO:0019866 View Gene Set 0.0001672 334 0.01241 180 organelle inner membrane amigo.geneontol...
GO GO:0030163 View Gene Set 0.0001826 398 0.01347 181 protein catabolic process amigo.geneontol...
GO GO:0000910 View Gene Set 0.0001895 54 0.01391 182 cytokinesis amigo.geneontol...
GO GO:0006275 View Gene Set 0.0002103 74 0.01535 183 regulation of DNA replication amigo.geneontol...
GO GO:0005667 View Gene Set 0.0002295 201 0.01667 184 transcription factor complex amigo.geneontol...
GO GO:0006888 View Gene Set 0.0002334 44 0.01685 185 ER to Golgi vesicle-mediated transport amigo.geneontol...
GO GO:0046930 View Gene Set 0.0002407 85 0.01729 186 pore complex amigo.geneontol...
GO GO:0031966 View Gene Set 0.0002464 420 0.0176 187 mitochondrial membrane amigo.geneontol...
GO GO:0000922 View Gene Set 0.0002528 63 0.01797 188 spindle pole amigo.geneontol...
GO GO:0005524 View Gene Set 0.0002627 1480 0.01857 189 ATP binding amigo.geneontol...
GO GO:0000228 View Gene Set 0.0002676 177 0.01882 190 nuclear chromosome amigo.geneontol...
GO GO:0051298 View Gene Set 0.0002698 18 0.01887 191 centrosome duplication amigo.geneontol...
GO GO:0016251 View Gene Set 0.0002718 49 0.01891 192 general RNA polymerase II transcription factor activity amigo.geneontol...
GO GO:0065004 View Gene Set 0.0003284 99 0.02273 193 protein-DNA complex assembly amigo.geneontol...
GO GO:0003824 View Gene Set 0.0003375 5198 0.02324 194 catalytic activity amigo.geneontol...
GO GO:0006417 View Gene Set 0.000341 151 0.02337 195 regulation of translation amigo.geneontol...
GO GO:0010833 View Gene Set 0.0003621 16 0.02468 196 telomere maintenance via telomere lengthening amigo.geneontol...
GO GO:0010564 View Gene Set 0.0003711 161 0.02517 197 regulation of cell cycle process amigo.geneontol...
GO GO:0003697 View Gene Set 0.0003836 58 0.02588 198 single-stranded DNA binding amigo.geneontol...
GO GO:0015931 View Gene Set 0.0003982 118 0.02674 199 nucleobase nucleoside nucleotide and nucleic acid transport amigo.geneontol...
GO GO:0005740 View Gene Set 0.0004036 444 0.02696 200 mitochondrial envelope amigo.geneontol...

Gene Set Collection: Broad.c1.CYTOBAND

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad chr1p22 View Gene Set 1.151e-06 84 0.0001877 1 Genes in cytogenetic band chr1p22 www.broad.mit.e...
Broad chr6q22 View Gene Set 6.779e-07 66 0.0001877 1 Genes in cytogenetic band chr6q22 www.broad.mit.e...
Broad chr2q31 View Gene Set 3.383e-05 87 0.003676 3 Genes in cytogenetic band chr2q31 www.broad.mit.e...
Broad chr2p22 View Gene Set 7.168e-05 40 0.004673 4 Genes in cytogenetic band chr2p22 www.broad.mit.e...
Broad chr15q21 View Gene Set 5.889e-05 95 0.004673 4 Genes in cytogenetic band chr15q21 www.broad.mit.e...
Broad chr2p16 View Gene Set 0.0001036 42 0.005629 6 Genes in cytogenetic band chr2p16 www.broad.mit.e...
Broad chr3q22 View Gene Set 0.0002466 47 0.01149 7 Genes in cytogenetic band chr3q22 www.broad.mit.e...
Broad chr18q11 View Gene Set 0.0003284 41 0.01338 8 Genes in cytogenetic band chr18q11 www.broad.mit.e...
Broad chr2q32 View Gene Set 0.000456 48 0.01652 9 Genes in cytogenetic band chr2q32 www.broad.mit.e...
Broad chr7q21 View Gene Set 0.0006316 91 0.01916 10 Genes in cytogenetic band chr7q21 www.broad.mit.e...
Broad chr5q13 View Gene Set 0.0006464 83 0.01916 10 Genes in cytogenetic band chr5q13 www.broad.mit.e...
Broad chr4q32 View Gene Set 0.0007096 39 0.01928 12 Genes in cytogenetic band chr4q32 www.broad.mit.e...
Broad chr12q15 View Gene Set 0.0008522 29 0.02137 13 Genes in cytogenetic band chr12q15 www.broad.mit.e...
Broad chr3q25 View Gene Set 0.001119 61 0.02606 14 Genes in cytogenetic band chr3q25 www.broad.mit.e...
Broad chr6q23 View Gene Set 0.001276 66 0.02639 15 Genes in cytogenetic band chr6q23 www.broad.mit.e...
Broad chr13q14 View Gene Set 0.001295 98 0.02639 15 Genes in cytogenetic band chr13q14 www.broad.mit.e...
Broad chr1p31 View Gene Set 0.001463 106 0.02805 17 Genes in cytogenetic band chr1p31 www.broad.mit.e...
Broad chr14q21 View Gene Set 0.001639 53 0.02969 18 Genes in cytogenetic band chr14q21 www.broad.mit.e...
Broad chr5q14 View Gene Set 0.001885 49 0.03235 19 Genes in cytogenetic band chr5q14 www.broad.mit.e...
Broad chr2p21 View Gene Set 0.002123 41 0.03461 20 Genes in cytogenetic band chr2p21 www.broad.mit.e...
Broad chr7p15 View Gene Set 0.002263 85 0.03513 21 Genes in cytogenetic band chr7p15 www.broad.mit.e...
Broad chr7q31 View Gene Set 0.003081 94 0.04565 22 Genes in cytogenetic band chr7q31 www.broad.mit.e...
Broad chr5q11 View Gene Set 0.003313 43 0.04696 23 Genes in cytogenetic band chr5q11 www.broad.mit.e...

Gene Set Collection: Broad.c2.CGP

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad DACOSTA_UV_RESPONSE_VIA_ERCC3_DN View Gene Set 2.248e-92 825 5.376e-89 1 Genes down-regulated in fibroblasts expressing mutant forms of ERCC3 [Gene ID=2071] after UV irradiation. www.broad.mit.e...
Broad DODD_NASOPHARYNGEAL_CARCINOMA_DN View Gene Set 4.298e-82 1253 5.14e-79 2 Genes down-regulated in nasopharyngeal carcinoma (NPC) compared to the normal tissue. www.broad.mit.e...
Broad SHEN_SMARCA2_TARGETS_UP View Gene Set 2.816e-76 406 2.245e-73 3 Genes whose expression positively correlated with that of SMARCA2 [Gene ID=6595] in prostate cancer samples. www.broad.mit.e...
Broad DIAZ_CHRONIC_MEYLOGENOUS_LEUKEMIA_UP View Gene Set 1.071e-62 1353 6.407e-60 4 Genes up-regulated in CD34+ [Gene ID=947] cells isolated from bone marrow of CML (chronic myelogenous leukemia) patients compared to those from normal donors. www.broad.mit.e...
Broad RODRIGUES_THYROID_CARCINOMA_POORLY_DIFFERENTIATED_UP View Gene Set 1.577e-60 589 7.546e-58 5 Genes up-regulated in poorly differentiated thyroid carcinoma (PDTC) compared to normal thyroid tissue. www.broad.mit.e...
Broad KINSEY_TARGETS_OF_EWSR1_FLII_FUSION_UP View Gene Set 3.207e-58 1180 1.279e-55 6 Genes up-regulated in TC71 and EWS502 cells (Ewing's sarcoma) upon knockdown of the EWSR1-FLII fusion [Gene ID=2130 2314]. www.broad.mit.e...
Broad KIM_WT1_TARGETS_DN View Gene Set 1.063e-57 431 3.631e-55 7 Genes down-regulated in UB27 cells (osteosarcoma) at any time point after inducing the expression of a mutant form of WT1 [Gene ID=7490]. www.broad.mit.e...
Broad RODRIGUES_THYROID_CARCINOMA_ANAPLASTIC_UP View Gene Set 3.459e-57 681 1.034e-54 8 Genes up-regulated in anaplastic thyroid carcinoma (ATC) compared to normal thyroid tissue. www.broad.mit.e...
Broad GEORGES_TARGETS_OF_MIR192_AND_MIR215 View Gene Set 3.154e-49 809 8.383e-47 9 Genes down-regulated in HCT116 cells (colon cancer) by expression of MIR192 or MIR215 [Gene ID=406967 406997] at 24 h. www.broad.mit.e...
Broad MILI_PSEUDOPODIA_HAPTOTAXIS_UP View Gene Set 5.937e-49 452 1.42e-46 10 Transcripts enriched in pseudopodia of NIH/3T3 cells (fibroblast) in response to haptotactic migratory stimulus by fibronectin FN1 [Gene ID=2335]. www.broad.mit.e...
Broad PUJANA_CHEK2_PCC_NETWORK View Gene Set 3.537e-47 744 7.692e-45 11 Genes constituting the CHEK2-PCC network of transcripts whose expression positively correlates (Pearson correlation coefficient PCC >= 0.4) with that of CHEK2 [Gene ID=11200]. www.broad.mit.e...
Broad DACOSTA_UV_RESPONSE_VIA_ERCC3_COMMON_DN View Gene Set 2.163e-45 418 4.311e-43 12 Common down-regulated transcripts in fibroblasts expressing either XP/CS or TDD mutant forms of ERCC3 [Gene ID=2071] after UVC irradiation. www.broad.mit.e...
Broad SCHLOSSER_SERUM_RESPONSE_DN View Gene Set 1.197e-44 666 2.202e-42 13 Cluster 4: genes down-regulated in B493-6 cells (B lymphocytes) upon serum stimulation but not affected by MYC [Gene ID=4609]. www.broad.mit.e...
Broad PUJANA_BRCA1_PCC_NETWORK View Gene Set 8.477e-42 1582 1.448e-39 14 Genes constituting the BRCA1-PCC network of transcripts whose expression positively correlated (Pearson correlation coefficient PCC >= 0.4) with that of BRCA1 [Gene ID=672] across a compendium of normal tissues. www.broad.mit.e...
Broad ENK_UV_RESPONSE_KERATINOCYTE_DN View Gene Set 4.451e-39 475 7.098e-37 15 Genes down-regulated in NHEK cells (normal epidermal keratinocytes) after UVB irradiation. www.broad.mit.e...
Broad SHEDDEN_LUNG_CANCER_POOR_SURVIVAL_A6 View Gene Set 7.584e-38 435 1.134e-35 16 Cluster 6 of method A: up-regulation of these genes in patients with non???small cell lung cancer (NSCLC) predicts poor survival outcome. www.broad.mit.e...
Broad GARY_CD5_TARGETS_DN View Gene Set 1.071e-34 415 1.507e-32 17 Genes down-regulated in Daudi cells (B lymphocytes) stably expressing CD5 [Gene ID=921] off a plasmid vector. www.broad.mit.e...
Broad ZHANG_BREAST_CANCER_PROGENITORS_UP View Gene Set 5.811e-34 370 7.722e-32 18 Genes changed in cancer stem cells isolated from mammary tumors compared to the non-tumorigenic cells. www.broad.mit.e...
Broad HAMAI_APOPTOSIS_VIA_TRAIL_UP View Gene Set 1.459e-32 328 1.837e-30 19 Genes up-regulated in T1 cells (primary melanoma sensitive to TRAIL [Gene ID=8743]) compared to G1 cells (metastatic melanoma resistant to TRAIL). www.broad.mit.e...
Broad TIEN_INTESTINE_PROBIOTICS_24HR_UP View Gene Set 8.686e-32 537 1.039e-29 20 Genes up-regulated in Caco-2 cells (intestinal epithelium) after coculture with the probiotic bacteria L. casei for 24h. www.broad.mit.e...
Broad PUJANA_BRCA2_PCC_NETWORK View Gene Set 1.773e-31 410 2.019e-29 21 Genes constituting the BRCA2-PCC network of transcripts whose expression positively correlated (Pearson correlation coefficient PCC >= 0.4) with that of BRCA2 [Gene ID=675] across a compendium of normal tissues. www.broad.mit.e...
Broad BUYTAERT_PHOTODYNAMIC_THERAPY_STRESS_UP View Gene Set 2.423e-30 783 2.634e-28 22 Genes up-regulated in T24 (bladder cancer) cells in response to the photodynamic therapy (PDT) stress. www.broad.mit.e...
Broad CAIRO_HEPATOBLASTOMA_CLASSES_UP View Gene Set 1.069e-29 577 1.111e-27 23 Genes up-regulated in robust Cluster 2 (rC2) of hepatoblastoma samples compared to those in the robust Cluster 1 (rC1). www.broad.mit.e...
Broad FLECHNER_BIOPSY_KIDNEY_TRANSPLANT_OK_VS_DONOR_UP View Gene Set 7.391e-29 532 7.367e-27 24 Genes diffierentially expressed in kidney biopsies from patients with well functioning kidneys more than 1-year post transplant compared to the biopsies from normal living kidney donors. www.broad.mit.e...
Broad NUYTTEN_EZH2_TARGETS_DN View Gene Set 5.679e-28 859 5.434e-26 25 Genes down-regulated in PC3 cells (prostate cancer) after knockdown of EZH2 [Gene ID=2146] by RNAi. www.broad.mit.e...
Broad DAZARD_RESPONSE_TO_UV_NHEK_DN View Gene Set 6.224e-27 256 5.726e-25 26 Genes down-regulated in NHEK cells (normal keratinocytes) by UV-B irradiation. www.broad.mit.e...
Broad SENGUPTA_NASOPHARYNGEAL_CARCINOMA_WITH_LMP1_UP View Gene Set 8.375e-27 375 7.42e-25 27 Genes up-regulated in nasopharyngeal carcinoma (NPC) positive for LMP1 [Gene ID=9260] a latent gene of Epstein-Barr virus (EBV). www.broad.mit.e...
Broad SENGUPTA_NASOPHARYNGEAL_CARCINOMA_UP View Gene Set 3.114e-26 269 2.66e-24 28 Genes up-regulated in nsopharyngeal carcinoma relative to the normal tissue. www.broad.mit.e...
Broad ONKEN_UVEAL_MELANOMA_UP View Gene Set 3.737e-26 739 3.082e-24 29 Genes up-regulated in uveal melanoma: class 2 vs class 1 tumors. www.broad.mit.e...
Broad OSMAN_BLADDER_CANCER_UP View Gene Set 8.005e-26 387 6.383e-24 30 Genes up-regulated in blood samples from bladder cancer patients. www.broad.mit.e...
Broad ACEVEDO_LIVER_CANCER_UP View Gene Set 1.015e-25 915 7.835e-24 31 Genes up-regulated in hepatocellular carcinoma (HCC) compared to normal liver samples. www.broad.mit.e...
Broad BLALOCK_ALZHEIMERS_DISEASE_DN View Gene Set 2.472e-25 1209 1.847e-23 32 Genes down-regulated in brain from patients with Alzheimer's disease. www.broad.mit.e...
Broad CHEN_HOXA5_TARGETS_9HR_UP View Gene Set 4.607e-25 210 3.339e-23 33 Differentially expressed genes 9 hr after tinduction of HoxA5 [Gene ID=3205] expression in a breast cancer cell line. www.broad.mit.e...
Broad PYEON_CANCER_HEAD_AND_NECK_VS_CERVICAL_UP View Gene Set 4.956e-25 175 3.487e-23 34 Up-regulated genes in head and neck cancer compared to cervical carcinoma samples. www.broad.mit.e...
Broad NUYTTEN_NIPP1_TARGETS_UP View Gene Set 4.804e-23 657 3.283e-21 35 Genes up-regulated in PC3 cells (prostate cancer) after knockdown of NIPP1 [Gene ID=5511] by RNAi. www.broad.mit.e...
Broad WANG_SMARCE1_TARGETS_DN View Gene Set 1.075e-22 329 7.141e-21 36 Genes down-regulated in BT549 cells (breast cancer) by expression of SMARCE1 [Gene ID=6605] off a retroviral vector. www.broad.mit.e...
Broad BIDUS_METASTASIS_UP View Gene Set 1.123e-22 203 7.26e-21 37 Genes up-regulated in endometroid endometrial tumors from patients with lymph node metastases compared to those without the metastases. www.broad.mit.e...
Broad BENPORATH_CYCLING_GENES View Gene Set 1.805e-22 630 1.136e-20 38 Genes showing cell-cycle stage-specific expression [PMID=12058064]. www.broad.mit.e...
Broad RHEIN_ALL_GLUCOCORTICOID_THERAPY_DN View Gene Set 4.215e-22 351 2.585e-20 39 Genes down-regulated in ALL (acute lymphoblastic leukemia) blasts after 1 week of treatment with glucocorticoids. www.broad.mit.e...
Broad MOREAUX_MULTIPLE_MYELOMA_BY_TACI_DN View Gene Set 2.411e-21 121 1.442e-19 40 Genes distinguishing in multiple myeloma (MM) samples with lower expression of TACI [Gene ID=23495]. www.broad.mit.e...
Broad BORCZUK_MALIGNANT_MESOTHELIOMA_UP View Gene Set 1.75e-20 290 1.021e-18 41 Genes up-regulated in biphasic (mixed) vs epithelial subtypes of malignant peritoneal mesothelioma. www.broad.mit.e...
Broad PUJANA_XPRSS_INT_NETWORK View Gene Set 7.465e-20 164 4.252e-18 42 Genes constituting the XPRSS-Int network: intersection of genes whose expression correlates with BRCA1 BRCA2 ATM and CHEK2 [Gene ID=672 675 472 11200] in a compendium of normal tissues. www.broad.mit.e...
Broad DEBIASI_APOPTOSIS_BY_REOVIRUS_INFECTION_UP View Gene Set 1.436e-18 242 7.987e-17 43 Genes up-regulated in HEK293 cells (embryonic kidney) at 6 h 12 h or 24 h after infection with reovirus strain T3A (known as a strong inducer of apoptosis). www.broad.mit.e...
Broad RODRIGUES_THYROID_CARCINOMA_POORLY_DIFFERENTIATED_DN View Gene Set 1.414e-17 732 7.685e-16 44 Genes down-regulated in poorly differentiated thyroid carcinoma (PDTC) compared to normal thyroid tissue. www.broad.mit.e...
Broad RAMALHO_STEMNESS_UP View Gene Set 1.75e-17 192 9.302e-16 45 Genes enriched in embryonic neural and hematopoietic stem cells. www.broad.mit.e...
Broad GENTILE_UV_HIGH_DOSE_DN View Gene Set 1.963e-17 240 1.021e-15 46 Selected genes down-regulated in WS1 (fibroblast) in response to irradiation with high dose UV-C. www.broad.mit.e...
Broad FLECHNER_BIOPSY_KIDNEY_TRANSPLANT_REJECTED_VS_OK_DN View Gene Set 4.323e-17 532 2.2e-15 47 Genes differentially expressed in kidney biopsies from patients with acute transplant rejection compared to the biopsies from patients with well functioning kidneys more than 1-year post transplant. www.broad.mit.e...
Broad WILCOX_PRESPONSE_TO_ROGESTERONE_UP View Gene Set 1.278e-16 143 6.371e-15 48 Genes up-regulated in primary cultures of ovarian surface epithlium cells exposed to progesterone [PubChem=5994] for 5 days. www.broad.mit.e...
Broad PUJANA_ATM_PCC_NETWORK View Gene Set 1.619e-16 1375 7.902e-15 49 Genes constituting the ATM-PCC network of transcripts whose expression positively correlated (Pearson correlation coefficient PCC >= 0.4) with that of ATM [Gene ID=472] across a compendium of normal tissues. www.broad.mit.e...
Broad SENESE_HDAC1_TARGETS_UP View Gene Set 3.85e-16 427 1.842e-14 50 Genes up-regulated in U2OS cells (osteosarcoma) upon knockdown of HDAC1 [Gene ID=3065] by RNAi. www.broad.mit.e...
Broad WONG_EMBRYONIC_STEM_CELL_CORE View Gene Set 4.122e-16 331 1.933e-14 51 The 'core ESC-like gene module': genes coordinately up-regulated in a compendium of mouse embryonic stem cells (ESC) which are shared with the human ESC-like module. www.broad.mit.e...
Broad KRIGE_RESPONSE_TO_TOSEDOSTAT_6HR_UP View Gene Set 7.539e-16 869 3.468e-14 52 Genes up-regulated in HL-60 cells (acute promyelocytic leukemia APL) after treatment with the aminopeptidase inhibitor tosedostat (CHR-2797) [PubChem=15547703] for 6 h. www.broad.mit.e...
Broad KRIGE_RESPONSE_TO_TOSEDOSTAT_24HR_UP View Gene Set 9.632e-16 716 4.347e-14 53 Genes up-regulated in HL-60 cells (acute promyelocytic leukemia APL) after treatment with the aminopeptidase inhibitor tosedostat (CHR-2797) [PubChem=15547703] for 24 h. www.broad.mit.e...
Broad BOYAULT_LIVER_CANCER_SUBCLASS_G3_UP View Gene Set 1.052e-15 184 4.662e-14 54 Up-regulated genes in hepatocellular carcinoma (HCC) subclass G3 defined by unsupervised clustering. www.broad.mit.e...
Broad BUYTAERT_PHOTODYNAMIC_THERAPY_STRESS_DN View Gene Set 1.304e-15 599 5.672e-14 55 Genes down-regulated in T24 (bladder cancer) cells in response to the photodynamic therapy (PDT) stress. www.broad.mit.e...
Broad DING_LUNG_CANCER_EXPRESSION_BY_COPY_NUMBER View Gene Set 1.744e-15 91 7.448e-14 56 The lung adenocarcinoma TSP (tumor sequencing project) genes showing strong correlation between DNA copy number variation and gene expression. www.broad.mit.e...
Broad ACEVEDO_LIVER_TUMOR_VS_NORMAL_ADJACENT_TISSUE_UP View Gene Set 1.828e-15 806 7.672e-14 57 Genes up-regulated in liver tumor compared to the normal adjacent tissue. www.broad.mit.e...
Broad DE_YY1_TARGETS_DN View Gene Set 2.449e-15 90 1.01e-13 58 Genes down-regulated in SaOS-2 cells (osteosarcoma) upon knockdown of YY1 [Gene ID=7528] by RNAi. www.broad.mit.e...
Broad WEI_MYCN_TARGETS_WITH_E_BOX View Gene Set 4.046e-15 757 1.64e-13 59 Genes whose promoters contain E-box motifs and whose expression changed in MYCN-3 cells (neuroblastoma) upon induction of MYCN [Gene ID=4613]. www.broad.mit.e...
Broad BENPORATH_NANOG_TARGETS View Gene Set 4.987e-15 946 1.988e-13 60 Set 'Nanog targets': genes upregulated and identified by ChIP on chip as Nanog [Gene ID=79923] transcription factor targets in human embryonic stem cells. www.broad.mit.e...
Broad DEURIG_T_CELL_PROLYMPHOCYTIC_LEUKEMIA_DN View Gene Set 7.371e-15 303 2.89e-13 61 Genes down-regulated in T-PLL cells (T-cell prolymphocytic leukemia) bearing the inv(14)/t(14:14) chromosomal aberration. www.broad.mit.e...
Broad MARTINEZ_RESPONSE_TO_TRABECTEDIN_DN View Gene Set 8.316e-15 212 3.209e-13 62 Genes down-regulated in at least 8 of 11 sarcoma cell lines by trabectedin [PubChem=3199]. www.broad.mit.e...
Broad BERENJENO_TRANSFORMED_BY_RHOA_UP View Gene Set 1.079e-14 485 4.034e-13 63 Genes up-regulated in NIH3T3 cells (fibroblasts) transformed by expression of contitutively active (Q63L) form of RHOA [Gene ID=387] off plasmid vector. www.broad.mit.e...
Broad DAZARD_UV_RESPONSE_CLUSTER_G6 View Gene Set 1.067e-14 122 4.034e-13 63 Cluster G6: genes increasingly down-regulated in NHEK cells (normal keratinocyte) after UV-B irradiation. www.broad.mit.e...
Broad ONKEN_UVEAL_MELANOMA_DN View Gene Set 1.168e-14 509 4.298e-13 65 Genes down-regulated in uveal melanoma: class 2 vs class 1 tumors. www.broad.mit.e...
Broad CASORELLI_ACUTE_PROMYELOCYTIC_LEUKEMIA_DN View Gene Set 1.394e-14 639 5.053e-13 66 Genes down-regulated in APL (acute promyeolocytic leukemia) blasts expressing PML-RARA fusion [Gene ID=5371 5914] compared to normal promyeloblasts. www.broad.mit.e...
Broad BLUM_RESPONSE_TO_SALIRASIB_DN View Gene Set 1.416e-14 332 5.057e-13 67 Selected genes down-regulated in response to the Ras inhibitor salirasib [PubChem=5469318] in a panel of cancer cell lines with constantly active HRAS [Gene ID=3265]. www.broad.mit.e...
Broad RIGGINS_TAMOXIFEN_RESISTANCE_DN View Gene Set 1.846e-14 211 6.493e-13 68 Genes down-regulated SUM44/LCCTam cells (breast cancer) resistant to 4-hydroxytamoxifen [PubChem=63062] relative to the parental SUM44 cells sensitive to the drug. www.broad.mit.e...
Broad LINDGREN_BLADDER_CANCER_CLUSTER_3_UP View Gene Set 1.93e-14 314 6.69e-13 69 Genes whose expression profile is specific to Cluster III of urothelial cell carcinoma (UCC) tumors. www.broad.mit.e...
Broad MITSIADES_RESPONSE_TO_APLIDIN_DN View Gene Set 2.242e-14 241 7.66e-13 70 Genes down-regulated in the MM1S cells (multiple myeloma) after treatment with aplidin [PubChem=44152164] a marine-derived compound with potential anti-cancer properties. www.broad.mit.e...
Broad NUYTTEN_NIPP1_TARGETS_DN View Gene Set 2.727e-14 758 9.188e-13 71 Genes down-regulated in PC3 cells (prostate cancer) after knockdown of NIPP1 [Gene ID=5511] by RNAi. www.broad.mit.e...
Broad WEST_ADRENOCORTICAL_TUMOR_UP View Gene Set 3.775e-14 283 1.254e-12 72 Up-regulated genes in pediatric adrenocortical tumors (ACT) compared to the normal tissue. www.broad.mit.e...
Broad KOBAYASHI_EGFR_SIGNALING_24HR_DN View Gene Set 4.884e-14 243 1.6e-12 73 Genes down-regulated in H1975 cells (non-small cell lung cancer NSCLC) resistant to gefitinib [PubChem=123631] after treatment with EGFR inhibitor CL-387785 [PubChem=2776] for 24h. www.broad.mit.e...
Broad BENPORATH_MYC_MAX_TARGETS View Gene Set 9.745e-14 768 3.15e-12 74 Set 'Myc targets2': targets of c-Myc [Gene ID=4609] and Max [Gene ID=4149] identified by ChIP on chip in a Burkitt???s lymphoma cell line; overlap set. www.broad.mit.e...
Broad BASAKI_YBX1_TARGETS_DN View Gene Set 1.132e-13 356 3.611e-12 75 Genes down-regulated in SKOC-3 cells (ovarian cancer) after YB-1 (YBX1) [Gene ID=4904] knockdown by RNAi. www.broad.mit.e...
Broad BROWNE_HCMV_INFECTION_6HR_DN View Gene Set 1.168e-13 159 3.676e-12 76 Genes down-regulated in primary fibroblast cell culture point after infection with HCMV (AD169 strain) at 6 h time point that were not down-regulated at the previous time point 4 h. www.broad.mit.e...
Broad SCHLOSSER_MYC_TARGETS_REPRESSED_BY_SERUM View Gene Set 1.368e-13 154 4.249e-12 77 Cluster 7: genes up-regulated in B493-6 cells (B lymphocytes) by MYC [Gene ID=4609] and down-regulated by the combination of MYC and serum. www.broad.mit.e...
Broad MANALO_HYPOXIA_DN View Gene Set 1.805e-13 276 5.536e-12 78 Genes down-regulated in response to both hypoxia and overexpression of an active form of HIF1A [Gene ID=3091]. www.broad.mit.e...
Broad NUYTTEN_EZH2_TARGETS_UP View Gene Set 2.505e-13 944 7.584e-12 79 Genes up-regulated in PC3 cells (prostate cancer) after knockdown of EZH2 [Gene ID=2146] by RNAi. www.broad.mit.e...
Broad WANG_LMO4_TARGETS_DN View Gene Set 4.924e-13 327 1.472e-11 80 Genes down-regulated in MCF7 cells (breast cancer) engineered to conditionally express LMO4 [Gene ID=8543] by a Tet Off system. www.broad.mit.e...
Broad WINNEPENNINCKX_MELANOMA_METASTASIS_UP View Gene Set 4.984e-13 152 1.472e-11 80 Genes from the 254-gene classifier which were up-regulated in melanoma patients with a reported distant metastasis within 4 years. www.broad.mit.e...
Broad KIM_WT1_TARGETS_12HR_DN View Gene Set 7.43e-13 200 2.168e-11 82 Genes down-regulated in UB27 cells (osteosarcoma) at 12 hr after inducing the expression of a mutated form of WT1 [Gene ID=7490]. www.broad.mit.e...
Broad GAZDA_DIAMOND_BLACKFAN_ANEMIA_PROGENITOR_DN View Gene Set 8.364e-13 61 2.411e-11 83 Genes down-regulated in common hematopoietic progenitor cells isolated from bone marrow of patients with Diamond-Blackfan anemia (DBA) and mutated RPS19 [Gene ID=6223]. www.broad.mit.e...
Broad WANG_CLIM2_TARGETS_DN View Gene Set 1.237e-12 166 3.523e-11 84 Genes down-regulated in MCF7 cells (breast cancer) engineered to conditionally express a dominant negative form of CLIM2 [Gene ID=8861] by a Tet Off system. www.broad.mit.e...
Broad PUIFFE_INVASION_INHIBITED_BY_ASCITES_DN View Gene Set 1.271e-12 140 3.578e-11 85 Genes down-regulated in OV-90 cells (ovarian cancer) exposed to ascites which inhibited invasion. www.broad.mit.e...
Broad UDAYAKUMAR_MED1_TARGETS_UP View Gene Set 2.557e-12 129 7.113e-11 86 Genes up-regulated in HeLa cells after knockdown of MED1 [Gene ID=5469] by RNAi. www.broad.mit.e...
Broad BENPORATH_ES_1 View Gene Set 4.317e-12 367 1.187e-10 87 Set 'ES exp1': genes overexpressed in human embryonic stem cells according to 5 or more out of 20 profiling studies. www.broad.mit.e...
Broad FUJII_YBX1_TARGETS_DN View Gene Set 4.986e-12 139 1.355e-10 88 Genes down-regulated in MCF-7 cells (breast cancer) after knockdown of YBX1 [Gene ID=4904] by RNAi. www.broad.mit.e...
Broad TIEN_INTESTINE_PROBIOTICS_2HR_DN View Gene Set 6.176e-12 85 1.66e-10 89 Genes down-regulated in Caco-2 cells (intestinal epithelium) after coculture with the probiotic bacteria L. casei for 2h. www.broad.mit.e...
Broad DANG_BOUND_BY_MYC View Gene Set 1.194e-11 1045 3.174e-10 90 Genes whose promoters are bound by MYC [Gene ID=4609] according to MYC Target Gene Database. www.broad.mit.e...
Broad CREIGHTON_ENDOCRINE_THERAPY_RESISTANCE_3 View Gene Set 2.036e-11 681 5.351e-10 91 The 'group 3 set' of genes associated with acquired endocrine therapy resistance in breast tumors expressing ESR1 and ERBB2 [Gene ID=2099 2064]. www.broad.mit.e...
Broad FARMER_BREAST_CANCER_APOCRINE_VS_BASAL View Gene Set 2.241e-11 321 5.825e-10 92 Genes which best discriminate between two groups of breast cancer according the status of ESR1 and AR [Gene ID=2099 367]: apocrine (ESR1- AR+) vs basal (ESR1- AR-). www.broad.mit.e...
Broad BENPORATH_SOX2_TARGETS View Gene Set 2.315e-11 704 5.954e-10 93 Set 'Sox2 targets': genes upregulated and identified by ChIP on chip as SOX2 [Gene ID=6657] transcription factor targets in human embryonic stem cells. www.broad.mit.e...
Broad HORIUCHI_WTAP_TARGETS_DN View Gene Set 2.791e-11 289 7.101e-10 94 Genes down-regulated in primary endothelial cells (HUVEC) after knockdown of WTAP [Gene ID=9589] by RNAi. www.broad.mit.e...
Broad SEIDEN_ONCOGENESIS_BY_MET View Gene Set 3.587e-11 83 8.952e-10 95 Genes changed in xenograft tumors formed by DLD-1 or DKO-4 cells (colon cancer) overexpressing MET [Gene ID=4233]. www.broad.mit.e...
Broad SPIELMAN_LYMPHOBLAST_EUROPEAN_VS_ASIAN_DN View Gene Set 3.593e-11 571 8.952e-10 95 Genes down-regulated in lymphoblastoid cells from the European population compared to those from the Asian population. www.broad.mit.e...
Broad NAKAMURA_TUMOR_ZONE_PERIPHERAL_VS_CENTRAL_DN View Gene Set 6.232e-11 583 1.537e-09 97 Down-regulated genes in peripheral zone of human pancreatic cancer growing in the pancreas of nude mice compared to that of the tumor from the central zone. www.broad.mit.e...
Broad JAATINEN_HEMATOPOIETIC_STEM_CELL_UP View Gene Set 7.96e-11 301 1.943e-09 98 Genes up-regulated in CD133+ [Gene ID=8842] cells (hematopoietic stem cells HSC) compared to the CD133- cells. www.broad.mit.e...
Broad BROWNE_HCMV_INFECTION_16HR_UP View Gene Set 8.42e-11 216 2.034e-09 99 Genes up-regulated in primary fibroblast cell culture after infection with HCMV (AD169 strain) at 16 h time point that were not up-regulated at the previous time point 14 h. www.broad.mit.e...
Broad BENPORATH_PROLIFERATION View Gene Set 1.004e-10 140 2.401e-09 100 Set 'Proliferation Cluster': genes defined in human breast tumor expression data. www.broad.mit.e...
Broad SENESE_HDAC3_TARGETS_UP View Gene Set 1.314e-10 471 3.111e-09 101 Genes up-regulated in U2OS cells (osteosarcoma) upon knockdown of HDAC3 [Gene ID=8841] by RNAi. www.broad.mit.e...
Broad PYEON_HPV_POSITIVE_TUMORS_UP View Gene Set 1.732e-10 86 4.062e-09 102 Up-regulated genes in cervical carcinoma and head and neck tumors positive for human papilloma virus (HPV) compared to those negative for HPV. www.broad.mit.e...
Broad HAHTOLA_MYCOSIS_FUNGOIDES_CD4_DN View Gene Set 1.787e-10 111 4.151e-09 103 Genes down-regulated in T helper cells (defines as CD4+) isolated from patients with mucosis fungoides compared to those from normal control donors. www.broad.mit.e...
Broad RICKMAN_METASTASIS_UP View Gene Set 2.079e-10 316 4.781e-09 104 Genes up-regulated in metastatic vs non-metastatic HNSCC (head and neck squamous cell carcinoma) samples. www.broad.mit.e...
Broad KRIGE_RESPONSE_TO_TOSEDOSTAT_24HR_DN View Gene Set 2.391e-10 920 5.446e-09 105 Genes down-regulated in HL-60 cells (acute promyelocytic leukemia APL) after treatment with the aminopeptidase inhibitor tosedostat (CHR-2797) [PubChem=15547703] for 24 h. www.broad.mit.e...
Broad TOYOTA_TARGETS_OF_MIR34B_AND_MIR34C View Gene Set 2.44e-10 436 5.506e-09 106 Genes down-regulated in HCT116 cells (colon cancer) upon expression of MIR34B or MIR34C [Gene ID=407041 407042] microRNAs. www.broad.mit.e...
Broad ROSTY_CERVICAL_CANCER_PROLIFERATION_CLUSTER View Gene Set 3.711e-10 138 8.296e-09 107 The 'Cervical Cancer Proliferation Cluster' (CCPC): genes whose expression in cervical carcinoma positively correlates with that of the HPV E6 and E7 oncogenes; they are also differentially expressed according to disease outcome. www.broad.mit.e...
Broad FERREIRA_EWINGS_SARCOMA_UNSTABLE_VS_STABLE_UP View Gene Set 3.836e-10 144 8.496e-09 108 Genes up-regulated in genomically unstable Ewing's sarcoma tumors compared to the stable ones. www.broad.mit.e...
Broad PUJANA_BRCA_CENTERED_NETWORK View Gene Set 4.492e-10 92 9.858e-09 109 Genes constituting the BRCA-centered network (BCN). www.broad.mit.e...
Broad KRIGE_RESPONSE_TO_TOSEDOSTAT_6HR_DN View Gene Set 4.56e-10 832 9.915e-09 110 Genes down-regulated in HL-60 cells (acute promyelocytic leukemia APL) after treatment with the aminopeptidase inhibitor tosedostat (CHR-2797) [PubChem=15547703] for 6 h. www.broad.mit.e...
Broad ZHANG_RESPONSE_TO_IKK_INHIBITOR_AND_TNF_DN View Gene Set 8.161e-10 97 1.759e-08 111 Genes down-regulated in BxPC3 cells (pancreatic cancer) after treatment with TNF [Gene ID=7124] or IKI-1 an inhibitor of I?B kinase (IKK). www.broad.mit.e...
Broad MUELLER_PLURINET View Gene Set 1.253e-09 294 2.676e-08 112 Genes constituting the PluriNet protein-protein network shared by the pluripotent cells (embryonic stem cells embryonical carcinomas and induced pluripotent cells). www.broad.mit.e...
Broad CAIRO_HEPATOBLASTOMA_UP View Gene Set 1.549e-09 200 3.278e-08 113 Genes up-regulated in hepatoblastoma samples compared to normal liver tissue. www.broad.mit.e...
Broad LIU_VMYB_TARGETS_UP View Gene Set 1.996e-09 121 4.187e-08 114 Genes up-regulated in MCF-7 cells (breast cancer) by overexpression of v-MYB oncogenic varian of CMYB [Gene ID=4602] off adenovirus vector. www.broad.mit.e...
Broad CHIANG_LIVER_CANCER_SUBCLASS_UNANNOTATED_DN View Gene Set 3.427e-09 155 7.127e-08 115 Marker genes down-regulated in the 'unannotated' subclass of hepatocellular carcinoma (HCC) samples. www.broad.mit.e...
Broad BROWNE_HCMV_INFECTION_18HR_UP View Gene Set 3.678e-09 175 7.584e-08 116 Genes up-regulated in primary fibroblast cell culture after infection with HCMV (AD169 strain) at 18 h time point that were not up-regulated at the previous time point 16 h. www.broad.mit.e...
Broad RODRIGUES_THYROID_CARCINOMA_ANAPLASTIC_DN View Gene Set 3.937e-09 485 8.026e-08 117 Genes down-regulated in anaplastic thyroid carcinoma (ATC) compared to normal thyroid tissue. www.broad.mit.e...
Broad MARKEY_RB1_ACUTE_LOF_DN View Gene Set 4.026e-09 201 8.026e-08 117 Genes down-regulated in adult fibroblasts with inactivated RB1 [Gene ID=5925] by Cre-lox: acute loss of function (LOF) of RB1. www.broad.mit.e...
Broad ONDER_CDH1_TARGETS_1_DN View Gene Set 3.989e-09 161 8.026e-08 117 Genes down-regulated in HMLE cells (mmortalized nontransformed mammary epithelial) by expression of a dominant-negative form of E-cadhedrin (CDH1) [Gene ID=999]. www.broad.mit.e...
Broad TARTE_PLASMA_CELL_VS_PLASMABLAST_DN View Gene Set 4.025e-09 303 8.026e-08 117 Genes down-regulated in mature plasma cells compared with plasmablastic B lymphocytes. www.broad.mit.e...
Broad FARMER_BREAST_CANCER_BASAL_VS_LULMINAL View Gene Set 4.551e-09 317 8.997e-08 121 Genes which best discriminated between two groups of breast cancer according to the status of ESR1 and AR [Gene ID=2099 367]: basal (ESR1- AR-) and luminal (ESR1+ AR+). www.broad.mit.e...
Broad GRAHAM_CML_DIVIDING_VS_NORMAL_QUIESCENT_UP View Gene Set 5.506e-09 180 1.079e-07 122 Genes up-regulated in quiescent CD34+ [Gene ID=8842] cells isolated from peripheral blood of normal donors compared to the dividing cells from CML (chronic myeloid leukemia) patients. www.broad.mit.e...
Broad CHARAFE_BREAST_CANCER_LUMINAL_VS_MESENCHYMAL_DN View Gene Set 6.04e-09 444 1.175e-07 123 Genes down-regulated in luminal-like breast cancer cell lines compared to the mesenchymal-like ones. www.broad.mit.e...
Broad KAUFFMANN_MELANOMA_RELAPSE_UP View Gene Set 9.702e-09 57 1.872e-07 124 DNA repair and replication genes up-regulated in melanoma patients who will relapse vs patients who will not. www.broad.mit.e...
Broad DACOSTA_UV_RESPONSE_VIA_ERCC3_XPCS_DN View Gene Set 1.017e-08 75 1.946e-07 125 Genes exclusively down-regulated in fibroblasts expressing the XP/CS mutant form of ERCC3 [Gene ID=2071] after high dose UVC irradiation. www.broad.mit.e...
Broad RODWELL_AGING_KIDNEY_NO_BLOOD_DN View Gene Set 1.782e-08 119 3.384e-07 126 Genes whose expression decreases with age in normal kidney excluding those with higher expression in blood. www.broad.mit.e...
Broad DACOSTA_UV_RESPONSE_VIA_ERCC3_TTD_DN View Gene Set 1.881e-08 76 3.543e-07 127 Genes exclusively down-regulated in fibroblasts expressing the TTD mutant form of ERCC3 [Gene ID=2071] after UVC irradiation. www.broad.mit.e...
Broad LI_WILMS_TUMOR_VS_FETAL_KIDNEY_1_DN View Gene Set 1.999e-08 158 3.735e-07 128 Genes down-regulated in Wilm's tumor samples compared to fetal kidney. www.broad.mit.e...
Broad FOURNIER_ACINAR_DEVELOPMENT_LATE_2 View Gene Set 2.046e-08 265 3.794e-07 129 Genes identified by method 2 as coordinately down-regulated late in HMEC cells (mammary epithelium) during acinar development in vitro. www.broad.mit.e...
Broad THUM_SYSTOLIC_HEART_FAILURE_DN View Gene Set 2.305e-08 221 4.24e-07 130 Genes down-regulated in samples with systolic heart failure compared to normal hearts. www.broad.mit.e...
Broad GOLDRATH_HOMEOSTATIC_PROLIFERATION View Gene Set 2.673e-08 154 4.881e-07 131 Up-regulated in CD8+ [Gene ID=925] T lymphocytes undergoing homeostatic proliferation (HP) versus the naive cells; these genes are not up-regulated versus effector or memory cell population. www.broad.mit.e...
Broad WAMUNYOKOLI_OVARIAN_CANCER_LMP_DN View Gene Set 3.073e-08 179 5.568e-07 132 Genes down-regulated in mucinous ovarian carcinoma tumors of low malignant potential (LMP) compared to normal ovarian surface epithelium tissue. www.broad.mit.e...
Broad LASTOWSKA_NEUROBLASTOMA_COPY_NUMBER_DN View Gene Set 3.151e-08 742 5.667e-07 133 Genes with copy number losses in primary neuroblastoma tumors. www.broad.mit.e...
Broad LU_AGING_BRAIN_DN View Gene Set 3.19e-08 255 5.695e-07 134 Genes down-regulated in postmortem brain frontal cortex samples from old subjects compared to those from the young ones. www.broad.mit.e...
Broad TOOKER_GEMCITABINE_RESISTANCE_DN View Gene Set 3.536e-08 122 6.218e-07 135 Down-regulated genes in Calu3 cells (non-small cell lung cancer NSCLC) resistant to gemcitabine [PubChem=3461] compared to the parental line sensitive to the drug. www.broad.mit.e...
Broad TOOKER_RESPONSE_TO_BEXAROTENE_UP View Gene Set 3.536e-08 122 6.218e-07 135 Up-regulated genes in Calu3 cells (non-small lung cancer cells NSCLC) resitant to gemcitabine [PubChem=3461] in response to bexarotene [PubChem=82146]. www.broad.mit.e...
Broad KAUFFMANN_DNA_REPAIR_GENES View Gene Set 4.377e-08 205 7.642e-07 137 Genes involved in DNA repair compiled manually by the authors. www.broad.mit.e...
Broad ZHONG_RESPONSE_TO_AZACITIDINE_AND_TSA_DN View Gene Set 4.679e-08 61 8.11e-07 138 Genes down-regulated in 3 out of 4 NSCLC cell lines (non-small cell lung cancer) after treatment with azacitidine [PubChem=9444] and TSA [PubChem=5562]. www.broad.mit.e...
Broad STEIN_ESRRA_TARGETS View Gene Set 4.762e-08 508 8.194e-07 139 Genes regulated by ESRRA [Gene ID=2101] in MCF-7 cells (breast cancer). www.broad.mit.e...
Broad GALE_APL_WITH_FLT3_MUTATED_UP View Gene Set 4.812e-08 52 8.222e-07 140 Genes up-regulated in acute promyelocytic leukemia (APL) patients with mutated FLT3 [Gene ID=2322]. www.broad.mit.e...
Broad YEGNASUBRAMANIAN_PROSTATE_CANCER View Gene Set 6.019e-08 122 1.021e-06 141 Genes expressed in at least one prostate cancer cell line but not in normal prostate epithelial cells or stromal cells www.broad.mit.e...
Broad OKUMURA_INFLAMMATORY_RESPONSE_LPS View Gene Set 6.563e-08 179 1.106e-06 142 Genes up-regulated in mast cells (MC) after stimulation with a bacterial lipopolysaccharide (LPS). www.broad.mit.e...
Broad NAGASHIMA_NRG1_SIGNALING_DN View Gene Set 6.654e-08 53 1.113e-06 143 Genes down-regulated in MCF7 cells (breast cancer) after stimulation with NRG1 [Gene ID=3084]. www.broad.mit.e...
Broad RICKMAN_TUMOR_DIFFERENTIATED_WELL_VS_POORLY_UP View Gene Set 1.216e-07 220 2.019e-06 144 Up-regulated genes that vary between HNSCC (head and neck squamous cell carcinoma) groups formed on the basis of their level of pathological differentiation: well vs poorly differentiated tumors. www.broad.mit.e...
Broad SOTIRIOU_BREAST_CANCER_GRADE_1_VS_3_UP View Gene Set 1.552e-07 143 2.56e-06 145 Up-regulated genes whose expression correlated with histologic grade of invasive breast cancer tumors: comparison of grade 1 vs grade 3. www.broad.mit.e...
Broad GEORGES_CELL_CYCLE_MIR192_TARGETS View Gene Set 1.581e-07 59 2.591e-06 146 Experimentally validated direct targets of MIR192 [Gene ID=406967] microRNA; MIR192 caused cell cycle arrest in HCT116 cells (colon cancer). www.broad.mit.e...
Broad GRADE_COLON_AND_RECTAL_CANCER_UP View Gene Set 1.766e-07 213 2.873e-06 147 Up-regulated genes in both rectal and colon carcinoma compared to normal mucosa samples. www.broad.mit.e...
Broad PUJANA_BREAST_CANCER_WITH_BRCA1_MUTATED_UP View Gene Set 1.81e-07 53 2.925e-06 148 The XPRSS-Int network genes up-regulated in breast tumors from patients with germline mutations in BRCA1 [Gene ID=672] compared to those with the wild type allele. www.broad.mit.e...
Broad WANG_LMO4_TARGETS_UP View Gene Set 2.196e-07 341 3.526e-06 149 Genes up-regulated in MCF7 cells (breast cancer) engineered to conditionally express LMO4 [Gene ID=8543] by a Tet Off system. www.broad.mit.e...
Broad BILD_CTNNB1_ONCOGENIC_SIGNATURE View Gene Set 2.483e-07 72 3.959e-06 150 Genes selected in supervised analyses to discriminate cells expressing activated beta-catenin (CTNNB1) [Gene ID=1499] oncogene from control cells expressing GFP. www.broad.mit.e...
Broad STEIN_ESRRA_TARGETS_DN View Gene Set 2.696e-07 100 4.271e-06 151 Genes down-regulated by ESRRA [Gene ID=2101] only. www.broad.mit.e...
Broad STEIN_ESRRA_TARGETS_RESPONSIVE_TO_ESTROGEN_DN View Gene Set 2.836e-07 41 4.463e-06 152 Genes down-regulated by estradiol [PubChem=5757] and down-regulated by ESRRA [Gene ID=2101] in MCF-7 cells (breast cancer). www.broad.mit.e...
Broad WELCSH_BRCA1_TARGETS_1_UP View Gene Set 3.074e-07 171 4.805e-06 153 Upregulated by induction of exogenous BRCA1 in EcR-293 cells www.broad.mit.e...
Broad RUIZ_TNC_TARGETS_UP View Gene Set 3.413e-07 145 5.301e-06 154 Genes up-regulated in T98G cells (glioblastoma) by TNC [Gene ID=3371]. www.broad.mit.e...
Broad DAVICIONI_MOLECULAR_ARMS_VS_ERMS_UP View Gene Set 3.512e-07 317 5.42e-06 155 Genes up-regulated in mARMS (molecular ARMS) compared to the mERMS (molecular ERMS) class of rhabdomyosarcoma tumors. www.broad.mit.e...
Broad TIEN_INTESTINE_PROBIOTICS_6HR_DN View Gene Set 3.955e-07 160 6.064e-06 156 Genes down-regulated in Caco-2 cells (intestinal epithelium) after coculture with the probiotic bacteria L. casei for 6h. www.broad.mit.e...
Broad PUJANA_BREAST_CANCER_LIT_INT_NETWORK View Gene Set 4.014e-07 100 6.116e-06 157 Genes constituting the LIT-Int network of proteins interacting with breast cancer reference proteins BRCA1 BRCA2 ATM and CHEK2 [Gene ID=672 675 472 11200]; the interactions were manually curated from the literature. www.broad.mit.e...
Broad BENPORATH_OCT4_TARGETS View Gene Set 4.323e-07 282 6.545e-06 158 Set 'Oct4 targets': genes upregulated and identified by ChIP on chip as OCT4 [Gene ID=5460] transcription factor targets in human embryonic stem cells. www.broad.mit.e...
Broad MISSIAGLIA_REGULATED_BY_METHYLATION_DN View Gene Set 4.479e-07 96 6.738e-06 159 Genes down-regulated in PaCa44 and CFPAC1 cells (pancreatic cancer) after treatment with decitabine [PubChem=451668] a DNA hypomethylating agent similar to azacitidine [PubChem=9444]. www.broad.mit.e...
Broad CREIGHTON_ENDOCRINE_THERAPY_RESISTANCE_5 View Gene Set 5.384e-07 446 8.048e-06 160 The 'group 5 set' of genes associated with acquired endocrine therapy resistance in breast tumors expressing ESR1 but not ERBB2 [Gene ID=2099 2064]. www.broad.mit.e...
Broad DAZARD_RESPONSE_TO_UV_SCC_UP View Gene Set 5.637e-07 80 8.376e-06 161 Genes up-regulated in SCC12B2 cells (squamous cell carcinoma) by UV-B irradiation. www.broad.mit.e...
Broad DAZARD_RESPONSE_TO_UV_SCC_DN View Gene Set 5.722e-07 96 8.449e-06 162 Genes down-regulated in SCC12B2 cells (squamous cell carcinoma) by UV-B irradiation. www.broad.mit.e...
Broad RODWELL_AGING_KIDNEY_DN View Gene Set 6.246e-07 106 9.167e-06 163 Genes whose expression decreases with age in normal kidney. www.broad.mit.e...
Broad DOUGLAS_BMI1_TARGETS_DN View Gene Set 7.056e-07 270 1.029e-05 164 Genes down-regulated in A4573 cells (Ewing's sarcoma ESFT) after knockdown of BMI1 [Gene ID=648] by RNAi. www.broad.mit.e...
Broad KIM_WT1_TARGETS_8HR_DN View Gene Set 7.264e-07 124 1.053e-05 165 Genes down-regulated in UB27 cells (osteosarcoma) at 8 hr after inducing the expression of a mutant form of WT1 [Gene ID=7490]. www.broad.mit.e...
Broad HOSHIDA_LIVER_CANCER_SUBCLASS_S2 View Gene Set 7.538e-07 114 1.086e-05 166 Genes from 'subtype S2' signature of hepatocellular carcinoma (HCC): proliferation MYC and AKT1 [Gene ID=4609 207] activation. www.broad.mit.e...
Broad BROWNE_HCMV_INFECTION_10HR_DN View Gene Set 8.386e-07 54 1.201e-05 167 Genes down-regulated in primary fibroblast cell culture after infection with HCMV (AD169 strain) at 10 h time point that were not down-regulated at the previous time point 8 h. www.broad.mit.e...
Broad CHARAFE_BREAST_CANCER_LUMINAL_VS_BASAL_DN View Gene Set 8.729e-07 437 1.243e-05 168 Genes down-regulated in luminal-like breast cancer cell lines compared to the basal-like ones. www.broad.mit.e...
Broad FARMER_BREAST_CANCER_APOCRINE VS LUMINAL View Gene Set 9.399e-07 312 1.33e-05 169 Genes which best discriminate between two groups of breast cancer according to the status of ESR1 and AR [Gene ID=2099 367]: apocrine (ESR1- AR+) and luminal (ESR1+ AR+). www.broad.mit.e...
Broad PAL_PRMT5_TARGETS_UP View Gene Set 9.676e-07 178 1.361e-05 170 Genes up-regulated in NIH-3T3 cells (fibroblast) after knockdown of PRMT5 [Gene ID=10419] by RNAi. www.broad.mit.e...
Broad SPIELMAN_LYMPHOBLAST_EUROPEAN_VS_ASIAN_UP View Gene Set 1.032e-06 469 1.443e-05 171 Genes up-regulated in lymphoblastoid cells from the European population compared to those from the Asian population. www.broad.mit.e...
Broad LEE_LIVER_CANCER_SURVIVAL_DN View Gene Set 1.103e-06 123 1.535e-05 172 Genes highly expressed in hepatocellular carcinoma with poor survival. www.broad.mit.e...
Broad LAIHO_COLORECTAL_CANCER_SERRATED_UP View Gene Set 1.217e-06 108 1.683e-05 173 Genes up-regulated in serrated vs conventional colorectal carcinoma (CRC) samples. www.broad.mit.e...
Broad KONDO_EZH2_TARGETS View Gene Set 1.249e-06 142 1.717e-05 174 Genes up-regulated in PC3 cells (prostate cancer) after EZH2 [Gene ID=2146] knockdown by RNAi. www.broad.mit.e...
Broad BASAKI_YBX1_TARGETS_UP View Gene Set 1.309e-06 279 1.79e-05 175 Genes up-regulated in SKOC-3 cells (ovarian cancer) after YB-1 (YBX1) [Gene ID=4904] knockdown by RNAi. www.broad.mit.e...
Broad CROONQUIST_IL6_DEPRIVATION_DN View Gene Set 1.407e-06 80 1.912e-05 176 Genes down-regulated in the ANBL-6 cell line (multiple myeloma MM) after withdrawal of IL6 [Gene ID=3569]. www.broad.mit.e...
Broad GOTTWEIN_TARGETS_OF_KSHV_MIR_K12_11 View Gene Set 1.504e-06 58 2.033e-05 177 Genes down-regulated in BJAB cell line (B lymphocyte) after expression of the viral microRNA miR-K12-11 which functions as an ortholog of cellular MIR155 [Gene ID=406947]. www.broad.mit.e...
Broad SENESE_HDAC2_TARGETS_UP View Gene Set 1.863e-06 109 2.503e-05 178 Genes up-regulated in U2OS cells (osteosarcoma) upon knockdown of HDAC2 [Gene ID=3066] by RNAi. www.broad.mit.e...
Broad ODONNELL_TFRC_TARGETS_DN View Gene Set 2.082e-06 131 2.783e-05 179 Genes dpwn-regulated in P493-6 cells (B lymphocyte) upon knockdown of TFRC [Gene ID=7037] by RNAi. www.broad.mit.e...
Broad SLEBOS_HEAD_AND_NECK_CANCER_WITH_HPV_UP View Gene Set 2.245e-06 72 2.983e-05 180 Genes up-regulated in head and neck squamous cell carcinoma (HNSCC) samples positive for HPV compared to the HPV-negative tumors. www.broad.mit.e...
Broad GOZGIT_ESR1_TARGETS_DN View Gene Set 2.486e-06 710 3.285e-05 181 Genes down-regulated in TMX2-28 cells (breast cancer) which do not express ESR1 [Gene ID=2099]) compared to the parental MCF7 cells which do. www.broad.mit.e...
Broad CREIGHTON_ENDOCRINE_THERAPY_RESISTANCE_2 View Gene Set 2.722e-06 377 3.578e-05 182 The 'group 2 set' of genes associated with acquired endocrine therapy resistance in breast tumors expressing ESR1 and ERBB2 [Gene ID=2099 2064]. www.broad.mit.e...
Broad WEI_MIR34A_TARGETS View Gene Set 3.384e-06 146 4.423e-05 183 Potential direct target genes for MIR34A [Gene ID=407040] microRNA in IMR32 cells (neuroblastoma). www.broad.mit.e...
Broad WENDT_COHESIN_TARGETS_UP View Gene Set 3.664e-06 32 4.763e-05 184 Cohesin targets identified by ChIP-chip which were up-regulated after knockdown of CTCF [Gene ID=10664] and RAD21 [Gene ID=5885] by RNAi. www.broad.mit.e...
Broad MITSIADES_RESPONSE_TO_APLIDIN_UP View Gene Set 3.785e-06 413 4.893e-05 185 Genes up-regulated in the MM1S cells (multiple myeloma) after treatment with aplidin [PubChem=44152164] a marine-derived compound with potential anti-cancer properties. www.broad.mit.e...
Broad PODAR_RESPONSE_TO_ADAPHOSTIN_UP View Gene Set 4.064e-06 140 5.227e-05 186 Up-regulated genes in MM1.S cells (multiple myeloma) treated with adaphostin [PubChem=387042] a tyrosine kinase inhibitor with anticancer properties. www.broad.mit.e...
Broad MILI_PSEUDOPODIA_CHEMOTAXIS_UP View Gene Set 4.173e-06 65 5.338e-05 187 Transcripts enriched in pseudopodia of NIH/3T3 cells (fibroblast) in response to the chemotactic migration stimulus by lysophosphatidic acid (LPA) [PubChem=3988]. www.broad.mit.e...
Broad BROWNE_HCMV_INFECTION_14HR_DN View Gene Set 4.378e-06 289 5.571e-05 188 Genes down-regulated in primary fibroblast cell culture after infection with HCMV (AD169 strain) at 14 h time point that were not down-regulated at the previous time point 12 h. www.broad.mit.e...
Broad LIU_SOX4_TARGETS_DN View Gene Set 4.794e-06 297 6.068e-05 189 Genes down-regulated in LNCaP cells (prostate cancer) by overexpression of SOX4 [Gene ID=6659] and up-regulated by its RNAi knockdown. www.broad.mit.e...
Broad CREIGHTON_ENDOCRINE_THERAPY_RESISTANCE_1 View Gene Set 4.871e-06 491 6.132e-05 190 The 'group 1 set' of genes associated with acquired endocrine therapy resistance in breast tumors expressing ESR1 and ERBB2 [Gene ID=2099 2064]. www.broad.mit.e...
Broad ENK_UV_RESPONSE_EPIDERMIS_DN View Gene Set 5.239e-06 504 6.561e-05 191 Genes down-regulated in epidermis after to UVB irradiation. www.broad.mit.e...
Broad TONKS_TARGETS_OF_RUNX1_RUNX1T1_FUSION_HSC_UP View Gene Set 5.53e-06 182 6.89e-05 192 Genes up-regulated in normal hematopoietic progenitors by RUNX1-RUNX1T1 [Gene ID=861 862] fusion. www.broad.mit.e...
Broad NOUZOVA_TRETINOIN_AND_H4_ACETYLATION View Gene Set 5.624e-06 124 6.971e-05 193 Genes whose CpG islands showed greatly increased histone H4 acetylation in NB4 cells (acute promyelocytic leukemia APL) upon treatment with tretinoin [PubChem=5538]. www.broad.mit.e...
Broad VECCHI_GASTRIC_CANCER_EARLY_UP View Gene Set 5.809e-06 408 7.163e-05 194 Up-regulated genes distinguishing between early gastric cancer (EGC) and normal tissue samples. www.broad.mit.e...
Broad VANTVEER_BREAST_CANCER_METASTASIS_DN View Gene Set 6.798e-06 104 8.339e-05 195 Genes whose expression is significantly and negatively correlated with poor breast cancer clinical outcome (defined as developing distant metastases in less than 5 years). www.broad.mit.e...
Broad HAN_SATB1_TARGETS_DN View Gene Set 6.91e-06 320 8.432e-05 196 Genes down-regulated in MDA-MB-231 cells (breast cancer) after knockdown of SATB1 [Gene ID=6304] by RNAi. www.broad.mit.e...
Broad HADDAD_B_LYMPHOCYTE_PROGENITOR View Gene Set 7.345e-06 275 8.918e-05 197 Genes up-regulated in hematopoietic progenitor cells (HPC) of B lymphocyte lineage CD34+CD45RA+CD10+ [Gene ID=947 5788 4311]. www.broad.mit.e...
Broad GENTILE_UV_RESPONSE_CLUSTER_D4 View Gene Set 7.562e-06 49 9.135e-05 198 Cluster d4: genes progressively down-regulated in WS1 cells (fibroblast) through 12 h after irradiation with high dose UV-C. www.broad.mit.e...
Broad SAKAI_CHRONIC_HEPATITIS_VS_LIVER_CANCER_UP View Gene Set 8.214e-06 82 9.873e-05 199 Selected genes up-regulated in peripheral blood monocytes (PBMC) of patients with hepatocellular carcinoma (HCC) compared to those with chronic hepatitis. www.broad.mit.e...
Broad CHOW_RASSF1_TARGETS_UP View Gene Set 8.435e-06 27 0.0001009 200 Genes up-regulated in C666-1 cells (nasopharyngeal carcinoma) by stable expression of RASSF1 [Gene ID=11186]. www.broad.mit.e...

Gene Set Collection: Broad.c2.CP.KEGG

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad KEGG_CELL_CYCLE View Gene Set 2.203e-07 128 4.097e-05 1 Cell cycle www.broad.mit.e...
Broad KEGG_RNA_DEGRADATION View Gene Set 2.375e-05 59 0.002209 2 RNA degradation www.broad.mit.e...
Broad KEGG_SPLICEOSOME View Gene Set 0.0001049 118 0.006501 3 Spliceosome www.broad.mit.e...
Broad KEGG_UBIQUITIN_MEDIATED_PROTEOLYSIS View Gene Set 0.0001907 138 0.008867 4 Ubiquitin mediated proteolysis www.broad.mit.e...
Broad KEGG_SNARE_INTERACTIONS_IN_VESICULAR_TRANSPORT View Gene Set 0.0008134 38 0.03026 5 SNARE interactions in vesicular transport www.broad.mit.e...
Broad KEGG_NUCLEOTIDE_EXCISION_REPAIR View Gene Set 0.001112 44 0.03448 6 Nucleotide excision repair www.broad.mit.e...

Gene Set Collection: Broad.c2.CP.REACTOME

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad REACTOME_CELL_CYCLE_MITOTIC View Gene Set 6.923e-14 306 2.977e-11 1 Genes involved in Cell Cycle Mitotic www.broad.mit.e...
Broad REACTOME_MITOTIC_M_M_G1_PHASES View Gene Set 3.437e-09 157 7.39e-07 2 Genes involved in Mitotic M-M/G1 phases www.broad.mit.e...
Broad REACTOME_G2_M_CHECKPOINTS View Gene Set 5.632e-09 43 8.073e-07 3 Genes involved in G2/M Checkpoints www.broad.mit.e...
Broad REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA View Gene Set 7.62e-09 128 8.191e-07 4 Genes involved in Processing of Capped Intron-Containing Pre-mRNA www.broad.mit.e...
Broad REACTOME_CELL_CYCLE_CHECKPOINTS View Gene Set 1.463e-08 110 1.258e-06 5 Genes involved in Cell Cycle Checkpoints www.broad.mit.e...
Broad REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS View Gene Set 2.721e-08 37 1.95e-06 6 Genes involved in Activation of ATR in response to replication stress www.broad.mit.e...
Broad REACTOME_METABOLISM_OF_RNA View Gene Set 8.421e-08 95 5.173e-06 7 Genes involved in Metabolism of RNA www.broad.mit.e...
Broad REACTOME_MITOTIC_PROMETAPHASE View Gene Set 1.008e-07 92 5.417e-06 8 Genes involved in Mitotic Prometaphase www.broad.mit.e...
Broad REACTOME_FORMATION_AND_MATURATION_OF_MRNA_TRANSCRIPT View Gene Set 4.558e-07 142 2.178e-05 9 Genes involved in Formation and Maturation of mRNA Transcript www.broad.mit.e...
Broad REACTOME_DNA_REPAIR View Gene Set 5.586e-07 102 2.402e-05 10 Genes involved in DNA Repair www.broad.mit.e...
Broad REACTOME_GENE_EXPRESSION View Gene Set 1.338e-06 415 5.229e-05 11 Genes involved in Gene Expression www.broad.mit.e...
Broad REACTOME_MRNA_SPLICING View Gene Set 1.554e-06 97 5.567e-05 12 Genes involved in mRNA Splicing www.broad.mit.e...
Broad REACTOME_ELONGATION_AND_PROCESSING_OF_CAPPED_TRANSCRIPTS View Gene Set 1.766e-06 124 5.842e-05 13 Genes involved in Elongation and Processing of Capped Transcripts www.broad.mit.e...
Broad REACTOME_G1_S_TRANSITION View Gene Set 5.082e-06 102 0.0001561 14 Genes involved in G1/S Transition www.broad.mit.e...
Broad REACTOME_S_PHASE View Gene Set 7.975e-06 103 0.0002286 15 Genes involved in S Phase www.broad.mit.e...
Broad REACTOME_DOUBLE_STRAND_BREAK_REPAIR View Gene Set 2.046e-05 21 0.0005176 16 Genes involved in Double-Strand Break Repair www.broad.mit.e...
Broad REACTOME_INFLUENZA_LIFE_CYCLE View Gene Set 1.932e-05 137 0.0005176 16 Genes involved in Influenza Life Cycle www.broad.mit.e...
Broad REACTOME_HIV_LIFE_CYCLE View Gene Set 8.809e-05 103 0.001994 18 Genes involved in HIV Life Cycle www.broad.mit.e...
Broad REACTOME_SYNTHESIS_OF_DNA View Gene Set 8.472e-05 89 0.001994 18 Genes involved in Synthesis of DNA www.broad.mit.e...
Broad REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE View Gene Set 9.52e-05 90 0.002007 20 Genes involved in Late Phase of HIV Life Cycle www.broad.mit.e...
Broad REACTOME_METABOLISM_OF_MRNA View Gene Set 9.8e-05 45 0.002007 20 Genes involved in Metabolism of mRNA www.broad.mit.e...
Broad REACTOME_ACTIVATION_OF_THE_PRE_REPLICATIVE_COMPLEX View Gene Set 0.0001046 30 0.002045 22 Genes involved in Activation of the pre-replicative complex www.broad.mit.e...
Broad REACTOME_G2_M_TRANSITION View Gene Set 0.0001145 84 0.002141 23 Genes involved in G2/M Transition www.broad.mit.e...
Broad REACTOME_SNRNP_ASSEMBLY View Gene Set 0.0001207 50 0.002162 24 Genes involved in snRNP Assembly www.broad.mit.e...
Broad REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION View Gene Set 0.0002065 33 0.003552 25 Genes involved in E2F mediated regulation of DNA replication www.broad.mit.e...
Broad REACTOME_TRANSCRIPTION View Gene Set 0.0002859 188 0.004554 26 Genes involved in Transcription www.broad.mit.e...
Broad REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRON_CONTAINING_TRANSCRIPT View Gene Set 0.000276 42 0.004554 26 Genes involved in Transport of Mature mRNA derived from an Intron-Containing Transcript www.broad.mit.e...
Broad REACTOME_HOMOLOGOUS_RECOMBINATION_REPAIR View Gene Set 0.0003106 15 0.004771 28 Genes involved in Homologous Recombination Repair www.broad.mit.e...
Broad REACTOME_HIV_INFECTION View Gene Set 0.0003903 183 0.005787 29 Genes involved in HIV Infection www.broad.mit.e...
Broad REACTOME_RNA_POLYMERASE_II_TRANSCRIPTION View Gene Set 0.0004045 83 0.005798 30 Genes involved in RNA Polymerase II Transcription www.broad.mit.e...
Broad REACTOME_DNA_STRAND_ELONGATION View Gene Set 0.0004667 31 0.006168 31 Genes involved in DNA strand elongation www.broad.mit.e...
Broad REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION View Gene Set 0.0004734 100 0.006168 31 Genes involved in Influenza Viral RNA Transcription and Replication www.broad.mit.e...
Broad REACTOME_TRANSPORT_OF_THE_SLBP_INDEPENDENT_MATURE_MRNA View Gene Set 0.0004608 32 0.006168 31 Genes involved in Transport of the SLBP independent Mature mRNA www.broad.mit.e...
Broad REACTOME_GTP_HYDROLYSIS_AND_JOINING_OF_THE_60S_RIBOSOMAL_SUBUNIT View Gene Set 0.0006809 106 0.008522 34 Genes involved in GTP hydrolysis and joining of the 60S ribosomal subunit www.broad.mit.e...
Broad REACTOME_NUCLEOTIDE_EXCISION_REPAIR View Gene Set 0.0006936 49 0.008522 34 Genes involved in Nucleotide Excision Repair www.broad.mit.e...
Broad REACTOME_NUCLEAR_IMPORT_OF_REV_PROTEIN View Gene Set 0.0007246 30 0.008654 36 Genes involved in Nuclear import of Rev protein www.broad.mit.e...
Broad REACTOME_DNA_REPLICATION_PRE_INITIATION View Gene Set 0.0007921 76 0.009073 37 Genes involved in DNA Replication Pre-Initiation www.broad.mit.e...
Broad REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS View Gene Set 0.0008018 29 0.009073 37 Genes involved in Transport of Ribonucleoproteins into the Host Nucleus www.broad.mit.e...
Broad REACTOME_RNA_POL_II_CTD_PHOSPHORYLATION_AND_INTERACTION_WITH_CE View Gene Set 0.0008702 26 0.009457 39 Genes involved in RNA Pol II CTD phosphorylation and interaction with CE www.broad.mit.e...
Broad REACTOME_TELOMERE_MAINTENANCE View Gene Set 0.0008797 77 0.009457 39 Genes involved in Telomere Maintenance www.broad.mit.e...
Broad REACTOME_TRANSLATION View Gene Set 0.0009555 120 0.01002 41 Genes involved in Translation www.broad.mit.e...
Broad REACTOME_CENTROSOME_MATURATION View Gene Set 0.001307 72 0.01307 42 Genes involved in Centrosome maturation www.broad.mit.e...
Broad REACTOME_TRANSCRIPTION_COUPLED_NER View Gene Set 0.001301 44 0.01307 42 Genes involved in Transcription-coupled NER (TC-NER) www.broad.mit.e...
Broad REACTOME_VPR_MEDIATED_NUCLEAR_IMPORT_OF_PICS View Gene Set 0.001556 31 0.01521 44 Genes involved in Vpr-mediated nuclear import of PICs www.broad.mit.e...
Broad REACTOME_E2F_ENABLED_INHIBITION_OF_PRE_REPLICATION_COMPLEX_FORMATION View Gene Set 0.001775 10 0.01696 45 Genes involved in E2F-enabled inhibition of pre-replication complex formation www.broad.mit.e...
Broad REACTOME_FORMATION_OF_THE_EARLY_ELONGATION_COMPLEX View Gene Set 0.001927 32 0.01801 46 Genes involved in Formation of the Early Elongation Complex www.broad.mit.e...
Broad REACTOME_GLOBAL_GENOMIC_NER View Gene Set 0.002219 33 0.0203 47 Genes involved in Global Genomic NER (GG-NER) www.broad.mit.e...
Broad REACTOME_LAGGING_STRAND_SYNTHESIS View Gene Set 0.00228 20 0.02043 48 Genes involved in Lagging Strand Synthesis www.broad.mit.e...
Broad REACTOME_MRNA_PROCESSING View Gene Set 0.00253 32 0.02181 49 Genes involved in mRNA Processing www.broad.mit.e...
Broad REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY View Gene Set 0.002536 29 0.02181 49 Genes involved in NEP/NS2 Interacts with the Cellular Export Machinery www.broad.mit.e...
Broad REACTOME_HIV1_TRANSCRIPTION_INITIATION View Gene Set 0.00263 39 0.02217 51 Genes involved in HIV-1 Transcription Initiation www.broad.mit.e...
Broad REACTOME_METABOLISM_OF_PROTEINS View Gene Set 0.003486 215 0.02883 52 Genes involved in Metabolism of proteins www.broad.mit.e...
Broad REACTOME_REV_MEDIATED_NUCLEAR_EXPORT_OF_HIV1_RNA View Gene Set 0.003779 31 0.02987 53 Genes involved in Rev-mediated nuclear export of HIV-1 RNA www.broad.mit.e...
Broad REACTOME_TRANSCRIPTION_OF_THE_HIV_GENOME View Gene Set 0.003821 59 0.02987 53 Genes involved in Transcription of the HIV genome www.broad.mit.e...
Broad REACTOME_TRANSLATION_INITIATION_COMPLEX_FORMATION View Gene Set 0.003698 56 0.02987 53 Genes involved in Translation initiation complex formation www.broad.mit.e...
Broad REACTOME_FORMATION_OF_A_POOL_OF_FREE_40S_SUBUNITS View Gene Set 0.004203 95 0.03171 56 Genes involved in Formation of a pool of free 40S subunits www.broad.mit.e...
Broad REACTOME_DEADENYLATION_OF_MRNA View Gene Set 0.004184 21 0.03171 56 Genes involved in Deadenylation of mRNA www.broad.mit.e...
Broad REACTOME_CYCLIN_A1_ASSOCIATED_EVENTS_DURING_G2_M_TRANSITION View Gene Set 0.004297 15 0.03186 58 Genes involved in Cyclin A1 associated events during G2/M transition www.broad.mit.e...
Broad REACTOME_CDC6_ASSOCIATION_WITH_THE_ORC:ORIGIN_COMPLEX View Gene Set 0.004433 11 0.03231 59 Genes involved in CDC6 association with the ORC:origin complex www.broad.mit.e...
Broad REACTOME_ORC1_REMOVAL_FROM_CHROMATIN View Gene Set 0.0048 63 0.0344 60 Genes involved in Orc1 removal from chromatin www.broad.mit.e...
Broad REACTOME_INSULIN_SYNTHESIS_AND_SECRETION View Gene Set 0.005233 129 0.03689 61 Genes involved in Insulin Synthesis and Secretion www.broad.mit.e...
Broad REACTOME_M_G1_TRANSITION View Gene Set 0.005625 61 0.03902 62 Genes involved in M/G1 Transition www.broad.mit.e...
Broad REACTOME_LOSS_OF_NLP_FROM_MITOTIC_CENTROSOMES View Gene Set 0.005758 62 0.0393 63 Genes involved in Loss of Nlp from mitotic centrosomes www.broad.mit.e...
Broad REACTOME_CDC20_PHOSPHO_APC_MEDIATED_DEGRADATION_OF_CYCLIN_A View Gene Set 0.006039 63 0.04057 64 Genes involved in Cdc20:Phospho-APC/C mediated degradation of Cyclin A www.broad.mit.e...
Broad REACTOME_MRNA_SPLICING_MINOR_PATHWAY View Gene Set 0.006724 38 0.04449 65 Genes involved in mRNA Splicing - Minor Pathway www.broad.mit.e...
Broad REACTOME_VIRAL_MRNA_TRANSLATION View Gene Set 0.007163 84 0.04667 66 Genes involved in Viral mRNA Translation www.broad.mit.e...
Broad REACTOME_EXTENSION_OF_TELOMERES View Gene Set 0.007448 28 0.04753 67 Genes involved in Extension of Telomeres www.broad.mit.e...
Broad REACTOME_RNA_POLYMERASE_I_PROMOTER_ESCAPE View Gene Set 0.007516 20 0.04753 67 Genes involved in RNA Polymerase I Promoter Escape www.broad.mit.e...

Gene Set Collection: Broad.c3.MIR

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad TTTGTAG MIR-520D View Gene Set 4.1e-12 279 9.061e-10 1 Targets of MicroRNA TTTGTAG MIR-520D www.broad.mit.e... MIR-520D...
Broad TAGCTTT MIR-9 View Gene Set 7.041e-10 198 7.781e-08 2 Targets of MicroRNA TAGCTTT MIR-9 www.broad.mit.e... MIR-9...
Broad CAGTATT MIR-200B MIR-200C MIR-429 View Gene Set 2.037e-09 386 1.5e-07 3 Targets of MicroRNA CAGTATT MIR-200B MIR-200C MIR-429 www.broad.mit.e... MIR-200B... MIR-200C... MIR-429...
Broad CATGTAA MIR-496 View Gene Set 2.936e-09 150 1.622e-07 4 Targets of MicroRNA CATGTAA MIR-496 www.broad.mit.e... MIR-496...
Broad ATGTTAA MIR-302C View Gene Set 3.97e-09 206 1.755e-07 5 Targets of MicroRNA ATGTTAA MIR-302C www.broad.mit.e... MIR-302C...
Broad GCACTTT MIR-17-5P MIR-20A MIR-106A MIR-106B MIR-20B MIR-519D View Gene Set 2.093e-08 506 6.607e-07 6 Targets of MicroRNA GCACTTT MIR-17-5P MIR-20A MIR-106A MIR-106B MIR-20B MIR-519D www.broad.mit.e... MIR-17-5P... MIR-20A... MIR-106A... MIR-106B... MIR-20B... MIR-519D...
Broad TGAATGT MIR-181A MIR-181B MIR-181C MIR-181D View Gene Set 2.045e-08 418 6.607e-07 6 Targets of MicroRNA TGAATGT MIR-181A MIR-181B MIR-181C MIR-181D www.broad.mit.e... MIR-181A... MIR-181B... MIR-181C... MIR-181D...
Broad ATTCTTT MIR-186 View Gene Set 2.981e-08 232 8.234e-07 8 Targets of MicroRNA ATTCTTT MIR-186 www.broad.mit.e... MIR-186...
Broad TACTTGA MIR-26A MIR-26B View Gene Set 4.102e-08 258 1.007e-06 9 Targets of MicroRNA TACTTGA MIR-26A MIR-26B www.broad.mit.e... MIR-26A... MIR-26B...
Broad AATGTGA MIR-23A MIR-23B View Gene Set 5.417e-08 356 1.088e-06 10 Targets of MicroRNA AATGTGA MIR-23A MIR-23B www.broad.mit.e... MIR-23A... MIR-23B...
Broad GTATTAT MIR-369-3P View Gene Set 5.043e-08 174 1.088e-06 10 Targets of MicroRNA GTATTAT MIR-369-3P www.broad.mit.e... MIR-369-3P...
Broad CTTGTAT MIR-381 View Gene Set 7.039e-08 167 1.296e-06 12 Targets of MicroRNA CTTGTAT MIR-381 www.broad.mit.e... MIR-381...
Broad ACTTTAT MIR-142-5P View Gene Set 8.735e-08 250 1.485e-06 13 Targets of MicroRNA ACTTTAT MIR-142-5P www.broad.mit.e... MIR-142-5P...
Broad TGCACTT MIR-519C MIR-519B MIR-519A View Gene Set 1.278e-07 377 1.889e-06 14 Targets of MicroRNA TGCACTT MIR-519C MIR-519B MIR-519A www.broad.mit.e... MIR-519C... MIR-519B... MIR-519A...
Broad CATTTCA MIR-203 View Gene Set 1.282e-07 235 1.889e-06 14 Targets of MicroRNA CATTTCA MIR-203 www.broad.mit.e... MIR-203...
Broad GTACTGT MIR-101 View Gene Set 1.412e-07 221 1.95e-06 16 Targets of MicroRNA GTACTGT MIR-101 www.broad.mit.e... MIR-101...
Broad TGTTTAC MIR-30A-5P MIR-30C MIR-30D MIR-30B MIR-30E-5P View Gene Set 1.805e-07 492 2.318e-06 17 Targets of MicroRNA TGTTTAC MIR-30A-5P MIR-30C MIR-30D MIR-30B MIR-30E-5P www.broad.mit.e... MIR-30A-5P... MIR-30C... MIR-30D... MIR-30B... MIR-30E-5P...
Broad TTGCACT MIR-130A MIR-301 MIR-130B View Gene Set 1.974e-07 335 2.318e-06 17 Targets of MicroRNA TTGCACT MIR-130A MIR-301 MIR-130B www.broad.mit.e... MIR-130A... MIR-301... MIR-130B...
Broad ATATGCA MIR-448 View Gene Set 1.993e-07 184 2.318e-06 17 Targets of MicroRNA ATATGCA MIR-448 www.broad.mit.e... MIR-448...
Broad ACTGAAA MIR-30A-3P MIR-30E-3P View Gene Set 2.339e-07 165 2.584e-06 20 Targets of MicroRNA ACTGAAA MIR-30A-3P MIR-30E-3P www.broad.mit.e... MIR-30A-3P... MIR-30E-3P...
Broad CTTTGTA MIR-524 View Gene Set 2.722e-07 375 2.865e-06 21 Targets of MicroRNA CTTTGTA MIR-524 www.broad.mit.e... MIR-524...
Broad GCAAAAA MIR-129 View Gene Set 3.466e-07 152 3.482e-06 22 Targets of MicroRNA GCAAAAA MIR-129 www.broad.mit.e... MIR-129...
Broad TAATGTG MIR-323 View Gene Set 5.412e-07 135 5.2e-06 23 Targets of MicroRNA TAATGTG MIR-323 www.broad.mit.e... MIR-323...
Broad AGCACTT MIR-93 MIR-302A MIR-302B MIR-302C MIR-302D MIR-372 MIR-373 MIR-520E MIR-520A MIR-526B MIR-520B MIR-520C MIR-520D View Gene Set 1.203e-06 281 1.084e-05 24 Targets of MicroRNA AGCACTT MIR-93 MIR-302A MIR-302B MIR-302C MIR-302D MIR-372 MIR-373 MIR-520E MIR-520A MIR-526B MIR-520B MIR-520C MIR-520D www.broad.mit.e... MIR-93... MIR-302A... MIR-302B... MIR-302C... MIR-302D... MIR-372... MIR-373... MIR-520E... MIR-520A... MIR-526B... MIR-520B... MIR-520C... MIR-520D...
Broad TTTGCAC MIR-19A MIR-19B View Gene Set 1.227e-06 440 1.084e-05 24 Targets of MicroRNA TTTGCAC MIR-19A MIR-19B www.broad.mit.e... MIR-19A... MIR-19B...
Broad TGCCTTA MIR-124A View Gene Set 2.194e-06 471 1.831e-05 26 Targets of MicroRNA TGCCTTA MIR-124A www.broad.mit.e... MIR-124A...
Broad TTTTGAG MIR-373 View Gene Set 2.237e-06 189 1.831e-05 26 Targets of MicroRNA TTTTGAG MIR-373 www.broad.mit.e... MIR-373...
Broad ACCATTT MIR-522 View Gene Set 2.537e-06 137 2.003e-05 28 Targets of MicroRNA ACCATTT MIR-522 www.broad.mit.e... MIR-522...
Broad GCACCTT MIR-18A MIR-18B View Gene Set 2.96e-06 90 2.185e-05 29 Targets of MicroRNA GCACCTT MIR-18A MIR-18B www.broad.mit.e... MIR-18A... MIR-18B...
Broad ATGTACA MIR-493 View Gene Set 2.966e-06 261 2.185e-05 29 Targets of MicroRNA ATGTACA MIR-493 www.broad.mit.e... MIR-493...
Broad TGCTTTG MIR-330 View Gene Set 3.24e-06 278 2.31e-05 31 Targets of MicroRNA TGCTTTG MIR-330 www.broad.mit.e... MIR-330...
Broad ATAAGCT MIR-21 View Gene Set 3.817e-06 104 2.636e-05 32 Targets of MicroRNA ATAAGCT MIR-21 www.broad.mit.e... MIR-21...
Broad CAGTGTT MIR-141 MIR-200A View Gene Set 4.296e-06 262 2.877e-05 33 Targets of MicroRNA CAGTGTT MIR-141 MIR-200A www.broad.mit.e... MIR-141... MIR-200A...
Broad ACACTAC MIR-142-3P View Gene Set 6.005e-06 110 3.903e-05 34 Targets of MicroRNA ACACTAC MIR-142-3P www.broad.mit.e... MIR-142-3P...
Broad TGAGATT MIR-216 View Gene Set 8.006e-06 90 5.055e-05 35 Targets of MicroRNA TGAGATT MIR-216 www.broad.mit.e... MIR-216...
Broad ATGTTTC MIR-494 View Gene Set 8.332e-06 136 5.115e-05 36 Targets of MicroRNA ATGTTTC MIR-494 www.broad.mit.e... MIR-494...
Broad ACATTCC MIR-1 MIR-206 View Gene Set 9.949e-06 248 5.943e-05 37 Targets of MicroRNA ACATTCC MIR-1 MIR-206 www.broad.mit.e... MIR-1... MIR-206...
Broad ATGCAGT MIR-217 View Gene Set 2.154e-05 93 0.0001253 38 Targets of MicroRNA ATGCAGT MIR-217 www.broad.mit.e... MIR-217...
Broad TTTGCAG MIR-518A-2 View Gene Set 2.231e-05 174 0.0001264 39 Targets of MicroRNA TTTGCAG MIR-518A-2 www.broad.mit.e... MIR-518A-2...
Broad TATTATA MIR-374 View Gene Set 2.623e-05 237 0.0001414 40 Targets of MicroRNA TATTATA MIR-374 www.broad.mit.e... MIR-374...
Broad CAGCTTT MIR-320 View Gene Set 2.596e-05 220 0.0001414 40 Targets of MicroRNA CAGCTTT MIR-320 www.broad.mit.e... MIR-320...
Broad TCTGATA MIR-361 View Gene Set 4.088e-05 74 0.0002101 42 Targets of MicroRNA TCTGATA MIR-361 www.broad.mit.e... MIR-361...
Broad AAGCACT MIR-520F View Gene Set 4.088e-05 198 0.0002101 42 Targets of MicroRNA AAGCACT MIR-520F www.broad.mit.e... MIR-520F...
Broad GCATTTG MIR-105 View Gene Set 4.395e-05 143 0.0002208 44 Targets of MicroRNA GCATTTG MIR-105 www.broad.mit.e... MIR-105...
Broad TGTGTGA MIR-377 View Gene Set 4.529e-05 162 0.0002224 45 Targets of MicroRNA TGTGTGA MIR-377 www.broad.mit.e... MIR-377...
Broad ACTGTAG MIR-139 View Gene Set 5.249e-05 111 0.0002522 46 Targets of MicroRNA ACTGTAG MIR-139 www.broad.mit.e... MIR-139...
Broad AAAGGAT MIR-501 View Gene Set 7.062e-05 107 0.000332 47 Targets of MicroRNA AAAGGAT MIR-501 www.broad.mit.e... MIR-501...
Broad ATCATGA MIR-433 View Gene Set 8.052e-05 94 0.0003707 48 Targets of MicroRNA ATCATGA MIR-433 www.broad.mit.e... MIR-433...
Broad GCTTGAA MIR-498 View Gene Set 9.081e-05 96 0.0004096 49 Targets of MicroRNA GCTTGAA MIR-498 www.broad.mit.e... MIR-498...
Broad CTACTGT MIR-199A View Gene Set 0.0001138 146 0.0005028 50 Targets of MicroRNA CTACTGT MIR-199A www.broad.mit.e... MIR-199A...
Broad AACATTC MIR-409-3P View Gene Set 0.0001201 115 0.0005206 51 Targets of MicroRNA AACATTC MIR-409-3P www.broad.mit.e... MIR-409-3P...
Broad TGTATGA MIR-485-3P View Gene Set 0.0001319 116 0.0005607 52 Targets of MicroRNA TGTATGA MIR-485-3P www.broad.mit.e... MIR-485-3P...
Broad ATAGGAA MIR-202 View Gene Set 0.0001804 86 0.0007521 53 Targets of MicroRNA ATAGGAA MIR-202 www.broad.mit.e... MIR-202...
Broad TTGCCAA MIR-182 View Gene Set 0.0001963 274 0.0008032 54 Targets of MicroRNA TTGCCAA MIR-182 www.broad.mit.e... MIR-182...
Broad TGCACTG MIR-148A MIR-152 MIR-148B View Gene Set 0.0002282 252 0.000917 55 Targets of MicroRNA TGCACTG MIR-148A MIR-152 MIR-148B www.broad.mit.e... MIR-148A... MIR-152... MIR-148B...
Broad GTGCAAT MIR-25 MIR-32 MIR-92 MIR-363 MIR-367 View Gene Set 0.0002602 260 0.001009 56 Targets of MicroRNA GTGCAAT MIR-25 MIR-32 MIR-92 MIR-363 MIR-367 www.broad.mit.e... MIR-25... MIR-32... MIR-92... MIR-363... MIR-367...
Broad AACTGGA MIR-145 View Gene Set 0.0002562 191 0.001009 56 Targets of MicroRNA AACTGGA MIR-145 www.broad.mit.e... MIR-145...
Broad ATTACAT MIR-380-3P View Gene Set 0.0002774 87 0.001057 58 Targets of MicroRNA ATTACAT MIR-380-3P www.broad.mit.e... MIR-380-3P...
Broad GTGCCAT MIR-183 View Gene Set 0.0003914 152 0.001466 59 Targets of MicroRNA GTGCCAT MIR-183 www.broad.mit.e... MIR-183...
Broad AAGGGAT MIR-188 View Gene Set 0.0004363 65 0.001607 60 Targets of MicroRNA AAGGGAT MIR-188 www.broad.mit.e... MIR-188...
Broad ACAACTT MIR-382 View Gene Set 0.0004528 64 0.001641 61 Targets of MicroRNA ACAACTT MIR-382 www.broad.mit.e... MIR-382...
Broad AAAGGGA MIR-204 MIR-211 View Gene Set 0.0005749 191 0.002049 62 Targets of MicroRNA AAAGGGA MIR-204 MIR-211 www.broad.mit.e... MIR-204... MIR-211...
Broad AAACCAC MIR-140 View Gene Set 0.0005968 90 0.002094 63 Targets of MicroRNA AAACCAC MIR-140 www.broad.mit.e... MIR-140...
Broad GTAAACC MIR-299-5P View Gene Set 0.0006324 44 0.002184 64 Targets of MicroRNA GTAAACC MIR-299-5P www.broad.mit.e... MIR-299-5P...
Broad CTTTGCA MIR-527 View Gene Set 0.000676 198 0.002298 65 Targets of MicroRNA CTTTGCA MIR-527 www.broad.mit.e... MIR-527...
Broad TCATCTC MIR-143 View Gene Set 0.0006955 126 0.002329 66 Targets of MicroRNA TCATCTC MIR-143 www.broad.mit.e... MIR-143...
Broad AAGCACA MIR-218 View Gene Set 0.0007364 336 0.002429 67 Targets of MicroRNA AAGCACA MIR-218 www.broad.mit.e... MIR-218...
Broad TCTATGA MIR-376A MIR-376B View Gene Set 0.0008037 71 0.002598 68 Targets of MicroRNA TCTATGA MIR-376A MIR-376B www.broad.mit.e... MIR-376A... MIR-376B...
Broad AACTGAC MIR-223 View Gene Set 0.0008112 84 0.002598 68 Targets of MicroRNA AACTGAC MIR-223 www.broad.mit.e... MIR-223...
Broad GTTATAT MIR-410 View Gene Set 0.0008754 86 0.002764 70 Targets of MicroRNA GTTATAT MIR-410 www.broad.mit.e... MIR-410...
Broad ACTACCT MIR-196A MIR-196B View Gene Set 0.001099 116 0.003421 71 Targets of MicroRNA ACTACCT MIR-196A MIR-196B www.broad.mit.e... MIR-196A... MIR-196B...
Broad GGCACTT MIR-519E View Gene Set 0.001728 108 0.005304 72 Targets of MicroRNA GGCACTT MIR-519E www.broad.mit.e... MIR-519E...
Broad ACTGCAG MIR-17-3P View Gene Set 0.001813 88 0.005489 73 Targets of MicroRNA ACTGCAG MIR-17-3P www.broad.mit.e... MIR-17-3P...
Broad GACTGTT MIR-212 MIR-132 View Gene Set 0.001934 134 0.005776 74 Targets of MicroRNA GACTGTT MIR-212 MIR-132 www.broad.mit.e... MIR-212... MIR-132...
Broad AGGTGCA MIR-500 View Gene Set 0.001968 79 0.0058 75 Targets of MicroRNA AGGTGCA MIR-500 www.broad.mit.e... MIR-500...
Broad TTGGAGA MIR-515-5P MIR-519E View Gene Set 0.002042 120 0.005939 76 Targets of MicroRNA TTGGAGA MIR-515-5P MIR-519E www.broad.mit.e... MIR-515-5P... MIR-519E...
Broad CTGTTAC MIR-194 View Gene Set 0.002357 90 0.006764 77 Targets of MicroRNA CTGTTAC MIR-194 www.broad.mit.e... MIR-194...
Broad AGTCTTA MIR-499 View Gene Set 0.00243 60 0.006886 78 Targets of MicroRNA AGTCTTA MIR-499 www.broad.mit.e... MIR-499...
Broad ACACTGG MIR-199A MIR-199B View Gene Set 0.003375 134 0.009145 79 Targets of MicroRNA ACACTGG MIR-199A MIR-199B www.broad.mit.e... MIR-199A... MIR-199B...
Broad ATAACCT MIR-154 View Gene Set 0.003393 51 0.009145 79 Targets of MicroRNA ATAACCT MIR-154 www.broad.mit.e... MIR-154...
Broad AGGCACT MIR-515-3P View Gene Set 0.003293 74 0.009145 79 Targets of MicroRNA AGGCACT MIR-515-3P www.broad.mit.e... MIR-515-3P...
Broad TAATAAT MIR-126 View Gene Set 0.003344 190 0.009145 79 Targets of MicroRNA TAATAAT MIR-126 www.broad.mit.e... MIR-126...
Broad ACAGGGT MIR-10A MIR-10B View Gene Set 0.003475 106 0.009252 83 Targets of MicroRNA ACAGGGT MIR-10A MIR-10B www.broad.mit.e... MIR-10A... MIR-10B...
Broad GGGCATT MIR-365 View Gene Set 0.004494 102 0.01182 84 Targets of MicroRNA GGGCATT MIR-365 www.broad.mit.e... MIR-365...
Broad GTTTGTT MIR-495 View Gene Set 0.004869 205 0.01243 85 Targets of MicroRNA GTTTGTT MIR-495 www.broad.mit.e... MIR-495...
Broad ATACTGT MIR-144 View Gene Set 0.004807 173 0.01243 85 Targets of MicroRNA ATACTGT MIR-144 www.broad.mit.e... MIR-144...
Broad AGCATTA MIR-155 View Gene Set 0.004894 118 0.01243 85 Targets of MicroRNA AGCATTA MIR-155 www.broad.mit.e... MIR-155...
Broad GGTAACC MIR-409-5P View Gene Set 0.005063 30 0.01272 88 Targets of MicroRNA GGTAACC MIR-409-5P www.broad.mit.e... MIR-409-5P...
Broad CAATGCA MIR-33 View Gene Set 0.005431 85 0.01349 89 Targets of MicroRNA CAATGCA MIR-33 www.broad.mit.e... MIR-33...
Broad GTGTTGA MIR-505 View Gene Set 0.005756 85 0.01398 90 Targets of MicroRNA GTGTTGA MIR-505 www.broad.mit.e... MIR-505...
Broad GTGACTT MIR-224 View Gene Set 0.005732 135 0.01398 90 Targets of MicroRNA GTGACTT MIR-224 www.broad.mit.e... MIR-224...
Broad TACAATC MIR-508 View Gene Set 0.006227 55 0.01496 92 Targets of MicroRNA TACAATC MIR-508 www.broad.mit.e... MIR-508...
Broad GTATGAT MIR-154 MIR-487 View Gene Set 0.006382 51 0.01517 93 Targets of MicroRNA GTATGAT MIR-154 MIR-487 www.broad.mit.e... MIR-154... MIR-487...
Broad GTAAGAT MIR-200A View Gene Set 0.007202 44 0.01691 94 Targets of MicroRNA GTAAGAT MIR-200A www.broad.mit.e... MIR-200A...
Broad GTGCCAA MIR-96 View Gene Set 0.007268 265 0.01691 94 Targets of MicroRNA GTGCCAA MIR-96 www.broad.mit.e... MIR-96...
Broad ATCTTGC MIR-31 View Gene Set 0.00736 57 0.01694 96 Targets of MicroRNA ATCTTGC MIR-31 www.broad.mit.e... MIR-31...
Broad ACTGTGA MIR-27A MIR-27B View Gene Set 0.007546 385 0.01719 97 Targets of MicroRNA ACTGTGA MIR-27A MIR-27B www.broad.mit.e... MIR-27A... MIR-27B...
Broad CACGTTT MIR-302A View Gene Set 0.008145 24 0.01818 98 Targets of MicroRNA CACGTTT MIR-302A www.broad.mit.e... MIR-302A...
Broad TAGAACC MIR-182 View Gene Set 0.008128 29 0.01818 98 Targets of MicroRNA TAGAACC MIR-182 www.broad.mit.e... MIR-182...
Broad ACCAAAG MIR-9 View Gene Set 0.008662 428 0.01914 100 Targets of MicroRNA ACCAAAG MIR-9 www.broad.mit.e... MIR-9...
Broad TAGGTCA MIR-192 MIR-215 View Gene Set 0.009297 37 0.02034 101 Targets of MicroRNA TAGGTCA MIR-192 MIR-215 www.broad.mit.e... MIR-192... MIR-215...
Broad GGCACAT MIR-455 View Gene Set 0.01084 46 0.02349 102 Targets of MicroRNA GGCACAT MIR-455 www.broad.mit.e... MIR-455...
Broad CAAGGAT MIR-362 View Gene Set 0.01151 53 0.0247 103 Targets of MicroRNA CAAGGAT MIR-362 www.broad.mit.e... MIR-362...
Broad GTGCAAA MIR-507 View Gene Set 0.01162 113 0.0247 103 Targets of MicroRNA GTGCAAA MIR-507 www.broad.mit.e... MIR-507...
Broad ACATATC MIR-190 View Gene Set 0.01205 50 0.02536 105 Targets of MicroRNA ACATATC MIR-190 www.broad.mit.e... MIR-190...
Broad GTTAAAG MIR-302B View Gene Set 0.01415 58 0.0295 106 Targets of MicroRNA GTTAAAG MIR-302B www.broad.mit.e... MIR-302B...
Broad AAAGACA MIR-511 View Gene Set 0.01524 163 0.03148 107 Targets of MicroRNA AAAGACA MIR-511 www.broad.mit.e... MIR-511...
Broad AGTCAGC MIR-345 View Gene Set 0.0157 52 0.03213 108 Targets of MicroRNA AGTCAGC MIR-345 www.broad.mit.e... MIR-345...
Broad ATACCTC MIR-202 View Gene Set 0.01654 150 0.03354 109 Targets of MicroRNA ATACCTC MIR-202 www.broad.mit.e... MIR-202...
Broad GTCGATC MIR-369-5P View Gene Set 0.0177 4 0.03555 110 Targets of MicroRNA GTCGATC MIR-369-5P www.broad.mit.e... MIR-369-5P...
Broad CTCAAGA MIR-526B View Gene Set 0.01911 64 0.03805 111 Targets of MicroRNA CTCAAGA MIR-526B www.broad.mit.e... MIR-526B...
Broad GTACAGG MIR-486 View Gene Set 0.02088 45 0.04121 112 Targets of MicroRNA GTACAGG MIR-486 www.broad.mit.e... MIR-486...

Gene Set Collection: Broad.c3.TFT

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad SCGGAAGY_V$ELK1_02 View Gene Set 3.605e-12 784 2.217e-09 1 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif SCGGAAGY which matches annotation for ELK1: ELK1 member of ETS oncogene family www.broad.mit.e...
Broad RCGCANGCGY_V$NRF1_Q6 View Gene Set 4.032e-07 580 0.000124 2 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif RCGCANGCGY which matches annotation for NRF1: nuclear respiratory factor 1 www.broad.mit.e...
Broad ACTAYRNNNCCCR_UNKNOWN View Gene Set 3.626e-05 293 0.007433 3 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif ACTAYRNNNCCCR. Motif does not match any known transcription factor www.broad.mit.e...
Broad GCCATNTTG_V$YY1_Q6 View Gene Set 6.231e-05 289 0.00958 4 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GCCATNTTG which matches annotation for YY1: YY1 transcription factor www.broad.mit.e...
Broad V$NFMUE1_Q6 View Gene Set 0.0001367 175 0.01401 5 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif CGGCCATCT. Motif does not match any known transcription factor www.broad.mit.e...
Broad TMTCGCGANR_UNKNOWN View Gene Set 0.0001333 100 0.01401 5 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif TMTCGCGANR. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$E2F_Q3_01 View Gene Set 0.000283 171 0.02487 7 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TTTSGCGSG which matches annotation for E2F<br> TFDP1: transcription factor Dp-1 www.broad.mit.e...
Broad GCGNNANTTCC_UNKNOWN View Gene Set 0.0004442 85 0.03021 8 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif GCGNNANTTCC. Motif does not match any known transcription factor www.broad.mit.e...
Broad GGCNKCCATNK_UNKNOWN View Gene Set 0.0005831 84 0.03021 8 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif GGCNKCCATNK. Motif does not match any known transcription factor www.broad.mit.e...
Broad KCCGNSWTTT_UNKNOWN View Gene Set 0.00051 76 0.03021 8 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif KCCGNSWTTT. Motif does not match any known transcription factor www.broad.mit.e...
Broad TCCCRNNRTGC_UNKNOWN View Gene Set 0.0005894 130 0.03021 8 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif TCCCRNNRTGC. Motif does not match any known transcription factor www.broad.mit.e...
Broad MGGAAGTG_V$GABP_B View Gene Set 0.0004268 512 0.03021 8 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif MGGAAGTG which matches annotation for GABPA: GA binding protein transcription factor alpha subunit 60kDa<br> GABPB2: GA binding protein transcription factor beta subunit 2 www.broad.mit.e...
Broad TGCGCANK_UNKNOWN View Gene Set 0.0006708 361 0.03173 13 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif TGCGCANK. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$E2F1_Q4_01 View Gene Set 0.0007987 167 0.03508 14 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TTTSGCGSG which matches annotation for E2F<br> TFDP1: transcription factor Dp-1 www.broad.mit.e...
Broad V$E2F_Q6_01 View Gene Set 0.001013 167 0.04155 15 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NKCGCGCSAAAN which matches annotation for E2F<br> TFDP1: transcription factor Dp-1 www.broad.mit.e...

Gene Set Collection: Broad.c4.CGN

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad GCM_UBE2N View Gene Set 3.495e-11 125 1.051e-08 1 Neighborhood of UBE2N www.broad.mit.e...
Broad GNF2_RRM1 View Gene Set 4.922e-11 82 1.051e-08 1 Neighborhood of RRM1 www.broad.mit.e...
Broad MORF_REV3L View Gene Set 7.983e-11 52 1.136e-08 3 Neighborhood of REV3L www.broad.mit.e...
Broad GCM_ZNF198 View Gene Set 1.313e-10 98 1.401e-08 4 Neighborhood of ZNF198 www.broad.mit.e...
Broad GNF2_SMC4L1 View Gene Set 1.741e-10 75 1.487e-08 5 Neighborhood of SMC4L1 www.broad.mit.e...
Broad GCM_MYST2 View Gene Set 9.071e-10 138 6.455e-08 6 Neighborhood of MYST2 www.broad.mit.e...
Broad MORF_HDAC2 View Gene Set 4.16e-09 256 2.538e-07 7 Neighborhood of HDAC2 www.broad.mit.e...
Broad MORF_CCNF View Gene Set 8.052e-09 65 3.856e-07 8 Neighborhood of CCNF www.broad.mit.e...
Broad MORF_EIF4E View Gene Set 1.084e-08 76 3.856e-07 8 Neighborhood of EIF4E www.broad.mit.e...
Broad GCM_DFFA View Gene Set 1.045e-08 100 3.856e-07 8 Neighborhood of DFFA www.broad.mit.e...
Broad GCM_RAB10 View Gene Set 8.457e-09 143 3.856e-07 8 Neighborhood of RAB10 www.broad.mit.e...
Broad GNF2_RBBP6 View Gene Set 9.452e-09 54 3.856e-07 8 Neighborhood of RBBP6 www.broad.mit.e...
Broad GNF2_KPNB1 View Gene Set 2.505e-08 52 8.229e-07 13 Neighborhood of KPNB1 www.broad.mit.e...
Broad GNF2_FEN1 View Gene Set 3.035e-08 49 9.257e-07 14 Neighborhood of FEN1 www.broad.mit.e...
Broad MORF_SOD1 View Gene Set 5.227e-08 247 1.488e-06 15 Neighborhood of SOD1 www.broad.mit.e...
Broad GCM_SUFU View Gene Set 5.942e-08 62 1.586e-06 16 Neighborhood of SUFU www.broad.mit.e...
Broad MORF_RAD21 View Gene Set 8.27e-08 157 2.077e-06 17 Neighborhood of RAD21 www.broad.mit.e...
Broad GNF2_HAT1 View Gene Set 8.943e-08 45 2.121e-06 18 Neighborhood of HAT1 www.broad.mit.e...
Broad GNF2_DEK View Gene Set 1.384e-07 45 3.11e-06 19 Neighborhood of DEK www.broad.mit.e...
Broad MORF_HAT1 View Gene Set 1.947e-07 155 4.157e-06 20 Neighborhood of HAT1 www.broad.mit.e...
Broad GNF2_XRCC5 View Gene Set 2.848e-07 61 5.79e-06 21 Neighborhood of XRCC5 www.broad.mit.e...
Broad MORF_DEK View Gene Set 4.194e-07 229 8.141e-06 22 Neighborhood of DEK www.broad.mit.e...
Broad GNF2_PCNA View Gene Set 4.496e-07 62 8.346e-06 23 Neighborhood of PCNA www.broad.mit.e...
Broad MORF_PPP6C View Gene Set 4.892e-07 88 8.703e-06 24 Neighborhood of PPP6C www.broad.mit.e...
Broad MORF_RFC4 View Gene Set 5.728e-07 137 9.784e-06 25 Neighborhood of RFC4 www.broad.mit.e...
Broad GCM_RAN View Gene Set 5.982e-07 160 9.824e-06 26 Neighborhood of RAN www.broad.mit.e...
Broad GCM_NCAM1 View Gene Set 1.033e-06 111 1.575e-05 27 Neighborhood of NCAM1 www.broad.mit.e...
Broad GNF2_CKS2 View Gene Set 1.015e-06 45 1.575e-05 27 Neighborhood of CKS2 www.broad.mit.e...
Broad GNF2_RFC4 View Gene Set 1.238e-06 57 1.823e-05 29 Neighborhood of RFC4 www.broad.mit.e...
Broad GNF2_CCNA2 View Gene Set 1.305e-06 62 1.858e-05 30 Neighborhood of CCNA2 www.broad.mit.e...
Broad GNF2_MCM5 View Gene Set 1.791e-06 51 2.467e-05 31 Neighborhood of MCM5 www.broad.mit.e...
Broad GNF2_CDC2 View Gene Set 1.881e-06 56 2.509e-05 32 Neighborhood of CDC2 www.broad.mit.e...
Broad MORF_SKP1A View Gene Set 2.276e-06 175 2.859e-05 33 Neighborhood of SKP1A www.broad.mit.e...
Broad GCM_MLL View Gene Set 2.216e-06 130 2.859e-05 33 Neighborhood of MLL www.broad.mit.e...
Broad GNF2_HDAC1 View Gene Set 3.019e-06 85 3.683e-05 35 Neighborhood of HDAC1 www.broad.mit.e...
Broad GCM_PTK2 View Gene Set 4.175e-06 126 4.952e-05 36 Neighborhood of PTK2 www.broad.mit.e...
Broad MORF_SP3 View Gene Set 4.734e-06 69 5.463e-05 37 Neighborhood of SP3 www.broad.mit.e...
Broad MORF_MSH2 View Gene Set 8.335e-06 52 9.366e-05 38 Neighborhood of MSH2 www.broad.mit.e...
Broad GNF2_CENPF View Gene Set 8.685e-06 56 9.509e-05 39 Neighborhood of CENPF www.broad.mit.e...
Broad GNF2_HMMR View Gene Set 1.055e-05 43 0.0001126 40 Neighborhood of HMMR www.broad.mit.e...
Broad GNF2_ELAC2 View Gene Set 1.1e-05 32 0.0001144 41 Neighborhood of ELAC2 www.broad.mit.e...
Broad GNF2_TTK View Gene Set 1.125e-05 34 0.0001144 41 Neighborhood of TTK www.broad.mit.e...
Broad MORF_RAD23A View Gene Set 1.504e-05 316 0.0001494 43 Neighborhood of RAD23A www.broad.mit.e...
Broad MORF_PSMC2 View Gene Set 1.664e-05 100 0.0001579 44 Neighborhood of PSMC2 www.broad.mit.e...
Broad MORF_RAD23B View Gene Set 1.633e-05 159 0.0001579 44 Neighborhood of RAD23B www.broad.mit.e...
Broad MORF_BUB3 View Gene Set 2.107e-05 256 0.0001743 46 Neighborhood of BUB3 www.broad.mit.e...
Broad MORF_XRCC5 View Gene Set 2.08e-05 210 0.0001743 46 Neighborhood of XRCC5 www.broad.mit.e...
Broad MORF_PTPN11 View Gene Set 2.154e-05 93 0.0001743 46 Neighborhood of PTPN11 www.broad.mit.e...
Broad GCM_GSPT1 View Gene Set 1.892e-05 129 0.0001743 46 Neighborhood of GSPT1 www.broad.mit.e...
Broad GCM_HBP1 View Gene Set 2.141e-05 54 0.0001743 46 Neighborhood of HBP1 www.broad.mit.e...
Broad GCM_MAP4K4 View Gene Set 2.01e-05 144 0.0001743 46 Neighborhood of MAP4K4 www.broad.mit.e...
Broad GNF2_DAP3 View Gene Set 1.966e-05 98 0.0001743 46 Neighborhood of DAP3 www.broad.mit.e...
Broad GNF2_PA2G4 View Gene Set 2.164e-05 73 0.0001743 46 Neighborhood of PA2G4 www.broad.mit.e...
Broad GCM_PTPRD View Gene Set 2.271e-05 50 0.0001796 54 Neighborhood of PTPRD www.broad.mit.e...
Broad MORF_MBD4 View Gene Set 2.553e-05 76 0.0001982 55 Neighborhood of MBD4 www.broad.mit.e...
Broad GCM_RBM8A View Gene Set 3.214e-05 64 0.000245 56 Neighborhood of RBM8A www.broad.mit.e...
Broad MORF_PSMC1 View Gene Set 3.658e-05 162 0.000274 57 Neighborhood of PSMC1 www.broad.mit.e...
Broad GCM_MAX View Gene Set 3.94e-05 28 0.0002868 58 Neighborhood of MAX www.broad.mit.e...
Broad GNF2_NPM1 View Gene Set 3.962e-05 57 0.0002868 58 Neighborhood of NPM1 www.broad.mit.e...
Broad GCM_ERBB2IP View Gene Set 4.754e-05 57 0.0003384 60 Neighborhood of ERBB2IP www.broad.mit.e...
Broad MORF_UBE2N View Gene Set 4.841e-05 79 0.0003388 61 Neighborhood of UBE2N www.broad.mit.e...
Broad GNF2_RFC3 View Gene Set 6.088e-05 38 0.0004193 62 Neighborhood of RFC3 www.broad.mit.e...
Broad GNF2_MCM4 View Gene Set 7.003e-05 50 0.0004747 63 Neighborhood of MCM4 www.broad.mit.e...
Broad GNF2_CCNB2 View Gene Set 9.613e-05 53 0.0006413 64 Neighborhood of CCNB2 www.broad.mit.e...
Broad MORF_CDC16 View Gene Set 0.000103 67 0.0006583 65 Neighborhood of CDC16 www.broad.mit.e...
Broad MORF_RAN View Gene Set 0.0001033 242 0.0006583 65 Neighborhood of RAN www.broad.mit.e...
Broad GCM_ACTG1 View Gene Set 0.0001019 113 0.0006583 65 Neighborhood of ACTG1 www.broad.mit.e...
Broad MORF_UNG View Gene Set 0.0001069 65 0.0006668 68 Neighborhood of UNG www.broad.mit.e...
Broad MORF_RAP1A View Gene Set 0.0001092 122 0.0006668 68 Neighborhood of RAP1A www.broad.mit.e...
Broad MORF_TPR View Gene Set 0.0001093 131 0.0006668 68 Neighborhood of TPR www.broad.mit.e...
Broad MORF_PPP2R5E View Gene Set 0.000123 76 0.0007399 71 Neighborhood of PPP2R5E www.broad.mit.e...
Broad GNF2_APEX1 View Gene Set 0.0001338 72 0.0007934 72 Neighborhood of APEX1 www.broad.mit.e...
Broad MORF_PRKDC View Gene Set 0.0001359 173 0.0007947 73 Neighborhood of PRKDC www.broad.mit.e...
Broad MORF_PPP1CC View Gene Set 0.0001437 150 0.0008231 74 Neighborhood of PPP1CC www.broad.mit.e...
Broad GNF2_DENR View Gene Set 0.0001446 39 0.0008231 74 Neighborhood of DENR www.broad.mit.e...
Broad MORF_PTEN View Gene Set 0.0001502 80 0.0008437 76 Neighborhood of PTEN www.broad.mit.e...
Broad MORF_EIF3S2 View Gene Set 0.0001748 220 0.0009692 77 Neighborhood of EIF3S2 www.broad.mit.e...
Broad GCM_BMPR2 View Gene Set 0.0001872 68 0.001025 78 Neighborhood of BMPR2 www.broad.mit.e...
Broad GNF2_TDG View Gene Set 0.00019 23 0.001027 79 Neighborhood of TDG www.broad.mit.e...
Broad MORF_FEN1 View Gene Set 0.0001961 58 0.001047 80 Neighborhood of FEN1 www.broad.mit.e...
Broad GNF2_CDC20 View Gene Set 0.000213 52 0.001123 81 Neighborhood of CDC20 www.broad.mit.e...
Broad MORF_RRM1 View Gene Set 0.0002197 90 0.001144 82 Neighborhood of RRM1 www.broad.mit.e...
Broad MORF_ANP32B View Gene Set 0.0002323 174 0.001181 83 Neighborhood of ANP32B www.broad.mit.e...
Broad MORF_CDC10 View Gene Set 0.0002307 120 0.001181 83 Neighborhood of CDC10 www.broad.mit.e...
Broad MORF_GNB1 View Gene Set 0.0002352 276 0.001181 85 Neighborhood of GNB1 www.broad.mit.e...
Broad MORF_ACP1 View Gene Set 0.0002659 178 0.00132 86 Neighborhood of ACP1 www.broad.mit.e...
Broad GNF2_BUB1B View Gene Set 0.0002776 46 0.001363 87 Neighborhood of BUB1B www.broad.mit.e...
Broad MORF_RPA1 View Gene Set 0.000287 55 0.001393 88 Neighborhood of RPA1 www.broad.mit.e...
Broad GNF2_MKI67 View Gene Set 0.0003439 26 0.00165 89 Neighborhood of MKI67 www.broad.mit.e...
Broad GCM_CRKL View Gene Set 0.0003777 50 0.001792 90 Neighborhood of CRKL www.broad.mit.e...
Broad GNF2_ANP32B View Gene Set 0.0004825 29 0.002264 91 Neighborhood of ANP32B www.broad.mit.e...
Broad GCM_FANCL View Gene Set 0.0004887 19 0.002268 92 Neighborhood of FANCL www.broad.mit.e...
Broad GCM_NF2 View Gene Set 0.0005482 235 0.002517 93 Neighborhood of NF2 www.broad.mit.e...
Broad GNF2_FBL View Gene Set 0.0005685 119 0.002582 94 Neighborhood of FBL www.broad.mit.e...
Broad GCM_NPM1 View Gene Set 0.0006207 108 0.00279 95 Neighborhood of NPM1 www.broad.mit.e...
Broad GNF2_ST13 View Gene Set 0.0006726 56 0.002992 96 Neighborhood of ST13 www.broad.mit.e...
Broad MORF_CSNK2B View Gene Set 0.0006908 256 0.003041 97 Neighborhood of CSNK2B www.broad.mit.e...
Broad GNF2_RAN View Gene Set 0.00076 78 0.003311 98 Neighborhood of RAN www.broad.mit.e...
Broad MORF_EIF4A2 View Gene Set 0.0007769 120 0.003351 99 Neighborhood of EIF4A2 www.broad.mit.e...
Broad GNF2_MSH2 View Gene Set 0.000823 26 0.003514 100 Neighborhood of MSH2 www.broad.mit.e...
Broad GNF2_BUB3 View Gene Set 0.0008894 22 0.00376 101 Neighborhood of BUB3 www.broad.mit.e...
Broad GCM_APEX1 View Gene Set 0.0009297 102 0.00386 102 Neighborhood of APEX1 www.broad.mit.e...
Broad GNF2_RRM2 View Gene Set 0.0009315 36 0.00386 102 Neighborhood of RRM2 www.broad.mit.e...
Broad GNF2_SMC1L1 View Gene Set 0.0009402 24 0.00386 102 Neighborhood of SMC1L1 www.broad.mit.e...
Broad MORF_RAD54L View Gene Set 0.001111 94 0.004459 105 Neighborhood of RAD54L www.broad.mit.e...
Broad GCM_PSME1 View Gene Set 0.001107 76 0.004459 105 Neighborhood of PSME1 www.broad.mit.e...
Broad GNF2_RPA1 View Gene Set 0.001117 20 0.004459 105 Neighborhood of RPA1 www.broad.mit.e...
Broad MORF_NPM1 View Gene Set 0.001303 152 0.005153 108 Neighborhood of NPM1 www.broad.mit.e...
Broad MORF_ATRX View Gene Set 0.001409 185 0.005519 109 Neighborhood of ATRX www.broad.mit.e...
Broad MORF_PCNA View Gene Set 0.001468 71 0.005698 110 Neighborhood of PCNA www.broad.mit.e...
Broad GCM_CSNK1A1 View Gene Set 0.001487 28 0.005721 111 Neighborhood of CSNK1A1 www.broad.mit.e...
Broad MORF_PPP1CA View Gene Set 0.001537 145 0.00586 112 Neighborhood of PPP1CA www.broad.mit.e...
Broad MORF_DNMT1 View Gene Set 0.001553 105 0.005868 113 Neighborhood of DNMT1 www.broad.mit.e...
Broad GNF2_ESPL1 View Gene Set 0.001577 35 0.005908 114 Neighborhood of ESPL1 www.broad.mit.e...
Broad MORF_EIF3S6 View Gene Set 0.001644 108 0.006001 115 Neighborhood of EIF3S6 www.broad.mit.e...
Broad MORF_G22P1 View Gene Set 0.001635 145 0.006001 115 Neighborhood of G22P1 www.broad.mit.e...
Broad GNF2_H2AFX View Gene Set 0.00162 28 0.006001 115 Neighborhood of H2AFX www.broad.mit.e...
Broad GNF2_CENPE View Gene Set 0.001686 37 0.0061 118 Neighborhood of CENPE www.broad.mit.e...
Broad MORF_SMC1L1 View Gene Set 0.00175 47 0.006278 119 Neighborhood of SMC1L1 www.broad.mit.e...
Broad MORF_ERH View Gene Set 0.00196 103 0.006973 120 Neighborhood of ERH www.broad.mit.e...
Broad MORF_BECN1 View Gene Set 0.002118 93 0.007474 121 Neighborhood of BECN1 www.broad.mit.e...
Broad MORF_EI24 View Gene Set 0.002257 136 0.007898 122 Neighborhood of EI24 www.broad.mit.e...
Broad MORF_BRCA1 View Gene Set 0.002438 242 0.008465 123 Neighborhood of BRCA1 www.broad.mit.e...
Broad GNF2_SMC2L1 View Gene Set 0.002514 30 0.008657 124 Neighborhood of SMC2L1 www.broad.mit.e...
Broad MORF_BAG5 View Gene Set 0.002544 48 0.00869 125 Neighborhood of BAG5 www.broad.mit.e...
Broad GNF2_MBD4 View Gene Set 0.002609 21 0.00884 126 Neighborhood of MBD4 www.broad.mit.e...
Broad GCM_DEAF1 View Gene Set 0.002718 23 0.009139 127 Neighborhood of DEAF1 www.broad.mit.e...
Broad MORF_GMPS View Gene Set 0.002786 48 0.0092 128 Neighborhood of GMPS www.broad.mit.e...
Broad GNF2_DDX5 View Gene Set 0.002801 54 0.0092 128 Neighborhood of DDX5 www.broad.mit.e...
Broad GNF2_EIF3S6 View Gene Set 0.002792 109 0.0092 128 Neighborhood of EIF3S6 www.broad.mit.e...
Broad MORF_RAB11A View Gene Set 0.003047 53 0.009932 131 Neighborhood of RAB11A www.broad.mit.e...
Broad MORF_UBE2I View Gene Set 0.003193 208 0.01033 132 Neighborhood of UBE2I www.broad.mit.e...
Broad MORF_BMPR2 View Gene Set 0.003268 47 0.01049 133 Neighborhood of BMPR2 www.broad.mit.e...
Broad MORF_PRKAG1 View Gene Set 0.003783 202 0.01197 134 Neighborhood of PRKAG1 www.broad.mit.e...
Broad MORF_TPT1 View Gene Set 0.003769 100 0.01197 134 Neighborhood of TPT1 www.broad.mit.e...
Broad MORF_DAP3 View Gene Set 0.00385 175 0.01209 136 Neighborhood of DAP3 www.broad.mit.e...
Broad GCM_DLG1 View Gene Set 0.00407 63 0.01269 137 Neighborhood of DLG1 www.broad.mit.e...
Broad MORF_PAPSS1 View Gene Set 0.004152 98 0.01285 138 Neighborhood of PAPSS1 www.broad.mit.e...
Broad GNF2_TPT1 View Gene Set 0.004309 38 0.01324 139 Neighborhood of TPT1 www.broad.mit.e...
Broad GCM_MAP1B View Gene Set 0.004347 55 0.01326 140 Neighborhood of MAP1B www.broad.mit.e...
Broad MORF_FBL View Gene Set 0.005156 121 0.01561 141 Neighborhood of FBL www.broad.mit.e...
Broad MORF_MTA1 View Gene Set 0.005395 95 0.01612 142 Neighborhood of MTA1 www.broad.mit.e...
Broad GNF2_NS View Gene Set 0.005399 35 0.01612 142 Neighborhood of NS www.broad.mit.e...
Broad GCM_CHUK View Gene Set 0.005482 61 0.01625 144 Neighborhood of CHUK www.broad.mit.e...
Broad MORF_AATF View Gene Set 0.005551 179 0.01635 145 Neighborhood of AATF www.broad.mit.e...
Broad MORF_SS18 View Gene Set 0.005771 55 0.01688 146 Neighborhood of SS18 www.broad.mit.e...
Broad MORF_PRDX3 View Gene Set 0.006403 79 0.0186 147 Neighborhood of PRDX3 www.broad.mit.e...
Broad GCM_TPR View Gene Set 0.007089 29 0.02045 148 Neighborhood of TPR www.broad.mit.e...
Broad MORF_PPP5C View Gene Set 0.007818 81 0.02241 149 Neighborhood of PPP5C www.broad.mit.e...
Broad GNF2_MLH1 View Gene Set 0.009059 36 0.02579 150 Neighborhood of MLH1 www.broad.mit.e...
Broad MORF_PSMF1 View Gene Set 0.009159 151 0.0259 151 Neighborhood of PSMF1 www.broad.mit.e...
Broad MORF_PRKAR1A View Gene Set 0.009289 133 0.02609 152 Neighborhood of PRKAR1A www.broad.mit.e...
Broad GCM_CBFB View Gene Set 0.009748 59 0.02721 153 Neighborhood of CBFB www.broad.mit.e...
Broad MORF_ACTG1 View Gene Set 0.009855 134 0.02732 154 Neighborhood of ACTG1 www.broad.mit.e...
Broad MORF_AP3D1 View Gene Set 0.009917 119 0.02732 154 Neighborhood of AP3D1 www.broad.mit.e...
Broad MORF_GSPT1 View Gene Set 0.01001 41 0.02739 156 Neighborhood of GSPT1 www.broad.mit.e...
Broad MORF_DEAF1 View Gene Set 0.01056 54 0.02873 157 Neighborhood of DEAF1 www.broad.mit.e...
Broad MORF_RFC1 View Gene Set 0.01202 98 0.03247 158 Neighborhood of RFC1 www.broad.mit.e...
Broad GNF2_MSH6 View Gene Set 0.01224 30 0.03287 159 Neighborhood of MSH6 www.broad.mit.e...
Broad MORF_RAC1 View Gene Set 0.01271 196 0.03391 160 Neighborhood of RAC1 www.broad.mit.e...
Broad MORF_CCNI View Gene Set 0.01289 76 0.0342 161 Neighborhood of CCNI www.broad.mit.e...
Broad GCM_PPM1D View Gene Set 0.01329 22 0.03503 162 Neighborhood of PPM1D www.broad.mit.e...
Broad MORF_BUB1B View Gene Set 0.01351 61 0.03538 163 Neighborhood of BUB1B www.broad.mit.e...
Broad GCM_CALM1 View Gene Set 0.01359 91 0.03538 163 Neighborhood of CALM1 www.broad.mit.e...
Broad MORF_RFC5 View Gene Set 0.01424 69 0.03685 165 Neighborhood of RFC5 www.broad.mit.e...
Broad MORF_JUND View Gene Set 0.01433 63 0.03687 166 Neighborhood of JUND www.broad.mit.e...
Broad GCM_TPT1 View Gene Set 0.01551 69 0.03965 167 Neighborhood of TPT1 www.broad.mit.e...
Broad MORF_BUB1 View Gene Set 0.01589 49 0.0404 168 Neighborhood of BUB1 www.broad.mit.e...
Broad MORF_RAB1A View Gene Set 0.01674 179 0.04229 169 Neighborhood of RAB1A www.broad.mit.e...
Broad GNF2_SNRK View Gene Set 0.01913 23 0.04805 170 Neighborhood of SNRK www.broad.mit.e...

Gene Set Collection: Broad.c4.CM

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad module_98 View Gene Set 3.37e-15 375 1.53e-12 1 Genes in module_98 www.broad.mit.e...
Broad module_252 View Gene Set 1.14e-12 224 2.587e-10 2 Genes in module_252 www.broad.mit.e...
Broad module_198 View Gene Set 2.069e-12 288 3.132e-10 3 Genes in module_198 www.broad.mit.e...
Broad module_36 View Gene Set 7.579e-10 146 8.602e-08 4 Genes in module_36 www.broad.mit.e...
Broad module_8 View Gene Set 2.562e-09 403 2.326e-07 5 Genes in module_8 www.broad.mit.e...
Broad module_277 View Gene Set 1.041e-08 48 7.879e-07 6 Genes in module_277 www.broad.mit.e...
Broad module_239 View Gene Set 1.85e-08 112 1.2e-06 7 Genes in module_239 www.broad.mit.e...
Broad module_97 View Gene Set 4.381e-08 91 2.486e-06 8 Genes in module_97 www.broad.mit.e...
Broad module_182 View Gene Set 1.27e-07 94 6.406e-06 9 Genes in module_182 www.broad.mit.e...
Broad module_3 View Gene Set 5.411e-07 374 2.457e-05 10 Genes in module_3 www.broad.mit.e...
Broad module_54 View Gene Set 6.223e-07 242 2.568e-05 11 Genes in module_54 www.broad.mit.e...
Broad module_197 View Gene Set 3.316e-06 170 0.0001254 12 Genes in module_197 www.broad.mit.e...
Broad module_32 View Gene Set 1.192e-05 227 0.0003906 13 Genes in module_32 www.broad.mit.e...
Broad module_332 View Gene Set 1.204e-05 35 0.0003906 13 Genes in module_332 www.broad.mit.e...
Broad module_83 View Gene Set 2.309e-05 296 0.0006988 15 Genes in module_83 www.broad.mit.e...
Broad module_358 View Gene Set 3.58e-05 72 0.001016 16 Genes in module_358 www.broad.mit.e...
Broad module_261 View Gene Set 5.078e-05 91 0.001356 17 Genes in module_261 www.broad.mit.e...
Broad module_183 View Gene Set 7.796e-05 52 0.001966 18 Genes in module_183 www.broad.mit.e...
Broad module_124 View Gene Set 9.155e-05 92 0.002188 19 Genes in module_124 www.broad.mit.e...
Broad module_125 View Gene Set 0.0002105 42 0.004779 20 Genes in module_125 www.broad.mit.e...
Broad module_151 View Gene Set 0.0002709 297 0.005857 21 Genes in module_151 www.broad.mit.e...
Broad module_57 View Gene Set 0.0003561 54 0.007029 22 Genes in module_57 www.broad.mit.e...
Broad module_158 View Gene Set 0.000343 41 0.007029 22 Genes in module_158 www.broad.mit.e...
Broad module_114 View Gene Set 0.0005914 314 0.01119 24 Genes in module_114 www.broad.mit.e...
Broad module_278 View Gene Set 0.0008629 34 0.01472 25 Genes in module_278 www.broad.mit.e...
Broad module_356 View Gene Set 0.0008754 141 0.01472 25 Genes in module_356 www.broad.mit.e...
Broad module_576 View Gene Set 0.000811 104 0.01472 25 Genes in module_576 www.broad.mit.e...
Broad module_17 View Gene Set 0.001203 351 0.0195 28 Genes in module_17 www.broad.mit.e...
Broad module_503 View Gene Set 0.00127 106 0.01989 29 Genes in module_503 www.broad.mit.e...
Broad module_105 View Gene Set 0.001353 192 0.02048 30 Genes in module_105 www.broad.mit.e...
Broad module_243 View Gene Set 0.001413 73 0.02069 31 Genes in module_243 www.broad.mit.e...
Broad module_244 View Gene Set 0.001464 182 0.02077 32 Genes in module_244 www.broad.mit.e...
Broad module_525 View Gene Set 0.001542 61 0.02122 33 Genes in module_525 www.broad.mit.e...
Broad module_82 View Gene Set 0.002046 24 0.02732 34 Genes in module_82 www.broad.mit.e...
Broad module_195 View Gene Set 0.002138 138 0.02774 35 Genes in module_195 www.broad.mit.e...
Broad module_4 View Gene Set 0.002957 21 0.0373 36 Genes in module_4 www.broad.mit.e...
Broad module_372 View Gene Set 0.00386 19 0.04737 37 Genes in module_372 www.broad.mit.e...

Gene Set Collection: Broad.c5.BP

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad NUCLEOBASENUCLEOSIDENUCLEOTIDE_AND_NUCLEIC_ACID_METABOLIC_PROCESS View Gene Set 8.384e-16 1197 6.917e-13 1 Genes annotated by the GO term GO:0006139. The chemical reactions and pathways involving nucleobases nucleosides nucleotides and nucleic acids. www.broad.mit.e...
Broad BIOPOLYMER_METABOLIC_PROCESS View Gene Set 1.192e-14 1623 4.915e-12 2 Genes annotated by the GO term GO:0043283. The chemical reactions and pathways involving biopolymers long repeating chains of monomers found in nature e.g. polysaccharides and proteins. www.broad.mit.e...
Broad RNA_METABOLIC_PROCESS View Gene Set 4.717e-11 801 1.297e-08 3 Genes annotated by the GO term GO:0016070. The chemical reactions and pathways involving RNA ribonucleic acid one of the two main type of nucleic acid consisting of a long unbranched macromolecule formed from ribonucleotides joined in 3' 5'-phosphodiester linkage. www.broad.mit.e...
Broad DNA_METABOLIC_PROCESS View Gene Set 7.567e-10 253 1.558e-07 4 Genes annotated by the GO term GO:0006259. The chemical reactions and pathways involving DNA deoxyribonucleic acid one of the two main types of nucleic acid consisting of a long unbranched macromolecule formed from one or more commonly two strands of linked deoxyribonucleotides. www.broad.mit.e...
Broad RNA_PROCESSING View Gene Set 9.441e-10 147 1.558e-07 4 Genes annotated by the GO term GO:0006396. Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules. www.broad.mit.e...
Broad CELL_CYCLE_PROCESS View Gene Set 1.763e-06 187 0.0002395 6 Genes annotated by the GO term GO:0022402. A cellular process that is involved in the progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. www.broad.mit.e...
Broad RNA_BIOSYNTHETIC_PROCESS View Gene Set 2.323e-06 625 0.0002395 6 Genes annotated by the GO term GO:0032774. The chemical reactions and pathways resulting in the formation of RNA ribonucleic acid one of the two main type of nucleic acid consisting of a long unbranched macromolecule formed from ribonucleotides joined in 3' 5'-phosphodiester linkage. Includes polymerization of ribonucleotide monomers. www.broad.mit.e...
Broad REGULATION_OF_RNA_METABOLIC_PROCESS View Gene Set 2.188e-06 457 0.0002395 6 Genes annotated by the GO term GO:0051252. Any process that modulates the frequency rate or extent of the chemical reactions and pathways involving RNA. www.broad.mit.e...
Broad DNA_REPAIR View Gene Set 2.969e-06 123 0.0002449 9 Genes annotated by the GO term GO:0006281. The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations chemical mutagens fungal and bacterial toxins etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal base excision repair nucleotide excision repair photoreactivation bypass double-strand break repair pathway and mismatch repair pathway. www.broad.mit.e...
Broad TRANSCRIPTION_DNA_DEPENDENT View Gene Set 2.913e-06 623 0.0002449 9 Genes annotated by the GO term GO:0006351. The synthesis of RNA on a template of DNA. www.broad.mit.e...
Broad REGULATION_OF_TRANSCRIPTIONDNA_DEPENDENT View Gene Set 3.728e-06 452 0.0002796 11 Genes annotated by the GO term GO:0006355. Any process that modulates the frequency rate or extent of DNA-dependent transcription. www.broad.mit.e...
Broad CELL_CYCLE_GO_0007049 View Gene Set 8.869e-06 304 0.0006098 12 Genes annotated by the GO term GO:0007049. The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division. www.broad.mit.e...
Broad REGULATION_OF_NUCLEOBASENUCLEOSIDENUCLEOTIDE_AND_NUCLEIC_ACID_METABOLIC_PROCESS View Gene Set 1.011e-05 601 0.000641 13 Genes annotated by the GO term GO:0019219. Any process that modulates the frequency rate or extent of the chemical reactions and pathways involving nucleobases nucleosides nucleotides and nucleic acids. www.broad.mit.e...
Broad TRANSCRIPTION_FROM_RNA_POLYMERASE_II_PROMOTER View Gene Set 1.088e-05 449 0.000641 13 Genes annotated by the GO term GO:0006366. The synthesis of RNA from a DNA template by RNA polymerase II (Pol II) originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs). www.broad.mit.e...
Broad RNA_SPLICING View Gene Set 1.681e-05 73 0.0009245 15 Genes annotated by the GO term GO:0008380. The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA. www.broad.mit.e...
Broad RESPONSE_TO_DNA_DAMAGE_STIMULUS View Gene Set 1.82e-05 159 0.0009383 16 Genes annotated by the GO term GO:0006974. A change in state or activity of a cell or an organism (in terms of movement secretion enzyme production gene expression etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism. www.broad.mit.e...
Broad DNA_REPLICATION View Gene Set 2.368e-05 101 0.001149 17 Genes annotated by the GO term GO:0006260. The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA. www.broad.mit.e...
Broad DNA_DEPENDENT_DNA_REPLICATION View Gene Set 2.878e-05 55 0.001319 18 Genes annotated by the GO term GO:0006261. The process whereby new strands of DNA are synthesized using parental DNA as a template for the DNA-dependent DNA polymerases that synthesize the new strands. www.broad.mit.e...
Broad CELL_CYCLE_CHECKPOINT_GO_0000075 View Gene Set 3.419e-05 47 0.001485 19 Genes annotated by the GO term GO:0000075. A point in the eukaryotic cell cycle where progress through the cycle can be halted until conditions are suitable for the cell to proceed to the next stage. www.broad.mit.e...
Broad PROTEIN_DNA_COMPLEX_ASSEMBLY View Gene Set 3.981e-05 48 0.001493 20 Genes annotated by the GO term GO:0065004. The aggregation arrangement and bonding together of proteins and DNA molecules to form a protein-DNA complex. www.broad.mit.e...
Broad REGULATION_OF_TRANSCRIPTION_FROM_RNA_POLYMERASE_II_PROMOTER View Gene Set 3.95e-05 285 0.001493 20 Genes annotated by the GO term GO:0006357. Any process that modulates the frequency rate or extent of transcription from an RNA polymerase II promoter. www.broad.mit.e...
Broad MRNA_PROCESSING_GO_0006397 View Gene Set 3.79e-05 59 0.001493 20 Genes annotated by the GO term GO:0006397. Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide. www.broad.mit.e...
Broad CELL_CYCLE_PHASE View Gene Set 4.588e-05 167 0.001646 23 Genes annotated by the GO term GO:0022403. A cell cycle process comprising the steps by which a cell progresses through one of the biochemical and morphological phases and events that occur during successive cell replication or nuclear replication events. www.broad.mit.e...
Broad TRANSCRIPTION View Gene Set 5.159e-05 738 0.001773 24 Genes annotated by the GO term GO:0006350. The synthesis of either RNA on a template of DNA or DNA on a template of RNA. www.broad.mit.e...
Broad MRNA_METABOLIC_PROCESS View Gene Set 5.939e-05 70 0.00196 25 Genes annotated by the GO term GO:0016071. The chemical reactions and pathways involving mRNA messenger RNA which is responsible for carrying the coded genetic 'message' transcribed from DNA to sites of protein assembly at the ribosomes. www.broad.mit.e...
Broad RESPONSE_TO_ENDOGENOUS_STIMULUS View Gene Set 6.713e-05 197 0.00213 26 Genes annotated by the GO term GO:0009719. A change in state or activity of a cell or an organism (in terms of movement secretion enzyme production gene expression etc.) as a result of an endogenous stimulus. www.broad.mit.e...
Broad MITOTIC_CELL_CYCLE View Gene Set 8.661e-05 148 0.002646 27 Genes annotated by the GO term GO:0000278. Progression through the phases of the mitotic cell cycle the most common eukaryotic cell cycle which canonically comprises four successive phases called G1 S G2 and M and includes replication of the genome and the subsequent segregation of chromosomes into daughter cells. In some variant cell cycles nuclear replication or nuclear division may not be followed by cell division or G1 and G2 phases may be absent. www.broad.mit.e...
Broad REGULATION_OF_TRANSCRIPTION View Gene Set 0.0001211 555 0.003569 28 Genes annotated by the GO term GO:0045449. Any process that modulates the frequency rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA. www.broad.mit.e...
Broad DOUBLE_STRAND_BREAK_REPAIR View Gene Set 0.0001462 22 0.004158 29 Genes annotated by the GO term GO:0006302. The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix. www.broad.mit.e...
Broad DNA_REPLICATION_INITIATION View Gene Set 0.0002698 15 0.007418 30 Genes annotated by the GO term GO:0006270. The process by which DNA replication is started; this involves the separation of a stretch of the DNA double helix the recruitment of DNA polymerases and the initiation of polymerase action. www.broad.mit.e...
Broad NUCLEOSOME_ASSEMBLY View Gene Set 0.0002849 10 0.007471 31 Genes annotated by the GO term GO:0006334. The aggregation arrangement and bonding together of a nucleosome the beadlike structural units of eukaryotic chromatin composed of histones and DNA. www.broad.mit.e...
Broad CHROMOSOME_ORGANIZATION_AND_BIOGENESIS View Gene Set 0.0002898 117 0.007471 31 Genes annotated by the GO term GO:0051276. A process that is carried out at the cellular level that results in the formation arrangement of constituent parts or disassembly of chromosomes structures composed of a very long molecule of DNA and associated proteins that carries hereditary information. www.broad.mit.e...
Broad INTRACELLULAR_TRANSPORT View Gene Set 0.0004502 271 0.01126 33 Genes annotated by the GO term GO:0046907. The directed movement of substances within a cell. www.broad.mit.e...
Broad REGULATION_OF_CELLULAR_METABOLIC_PROCESS View Gene Set 0.0004971 767 0.01206 34 Genes annotated by the GO term GO:0031323. Any process that modulates the frequency rate or extent of the chemical reactions and pathways by which individual cells transform chemical substances. www.broad.mit.e...
Broad CHROMATIN_ASSEMBLY View Gene Set 0.0005351 16 0.01261 35 Genes annotated by the GO term GO:0031497. The assembly of DNA histone proteins and other associated proteins into chromatin structure beginning with the formation of the basic unit the nucleosome followed by organization of the nucleosomes into higher order structures ultimately giving rise to a complex organization of specific domains within the nucleus. www.broad.mit.e...
Broad M_PHASE View Gene Set 0.0005787 111 0.01326 36 Genes annotated by the GO term GO:0000279. Progression through M phase the part of the cell cycle comprising nuclear division. www.broad.mit.e...
Broad REGULATION_OF_METABOLIC_PROCESS View Gene Set 0.0006494 779 0.01448 37 Genes annotated by the GO term GO:0019222. Any process that modulates the frequency rate or extent of the chemical reactions and pathways within a cell or an organism. www.broad.mit.e...
Broad PROTEIN_RNA_COMPLEX_ASSEMBLY View Gene Set 0.000712 59 0.01546 38 Genes annotated by the GO term GO:0022618. The aggregation arrangement and bonding together of proteins and RNA molecules to form a ribonucleoprotein complex. www.broad.mit.e...
Broad REGULATION_OF_CELL_CYCLE View Gene Set 0.0008611 176 0.01821 39 Genes annotated by the GO term GO:0051726. Any process that modulates the rate or extent of progression through the cell cycle. www.broad.mit.e...
Broad REGULATION_OF_GENE_EXPRESSION View Gene Set 0.001023 660 0.0211 40 Genes annotated by the GO term GO:0010468. Any process that modulates the frequency rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form. www.broad.mit.e...
Broad ORGANELLE_ORGANIZATION_AND_BIOGENESIS View Gene Set 0.001067 458 0.02147 41 Genes annotated by the GO term GO:0006996. A process that is carried out at the cellular level which results in the formation arrangement of constituent parts or disassembly of any organelle within a cell. www.broad.mit.e...
Broad DNA_PACKAGING View Gene Set 0.001132 34 0.02223 42 Genes annotated by the GO term GO:0006323. Any process by which DNA and associated proteins are formed into a compact orderly structure. www.broad.mit.e...
Broad M_PHASE_OF_MITOTIC_CELL_CYCLE View Gene Set 0.00116 83 0.02225 43 Genes annotated by the GO term GO:0000087. Progression through M phase the part of the mitotic cell cycle during which mitosis takes place. www.broad.mit.e...
Broad PROTEIN_FOLDING View Gene Set 0.001218 56 0.02237 44 Genes annotated by the GO term GO:0006457. The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure. www.broad.mit.e...
Broad NEGATIVE_REGULATION_OF_NUCLEOBASENUCLEOSIDENUCLEOTIDE_AND_NUCLEIC_ACID_METABOLIC_PROCESS View Gene Set 0.00122 205 0.02237 44 Genes annotated by the GO term GO:0045934. Any process that stops prevents or reduces the frequency rate or extent of the chemical reactions and pathways involving nucleobases nucleosides nucleotides and nucleic acids. www.broad.mit.e...
Broad PROTEIN_MODIFICATION_BY_SMALL_PROTEIN_CONJUGATION View Gene Set 0.001268 43 0.02274 46 Genes annotated by the GO term GO:0032446. A process by which one or more moieties of a small protein such as ubiquitin or a ubiquitin-like protein are covalently attached to a target protein. www.broad.mit.e...
Broad RIBONUCLEOPROTEIN_COMPLEX_BIOGENESIS_AND_ASSEMBLY View Gene Set 0.001732 74 0.0304 47 Genes annotated by the GO term GO:0022613. The cellular process by which a complex containing RNA and proteins is synthesized aggregates and bonds together. www.broad.mit.e...
Broad MITOSIS View Gene Set 0.001901 81 0.03267 48 Genes annotated by the GO term GO:0007067. Progression through mitosis the division of the eukaryotic cell nucleus to produce two daughter nuclei that usually contain the identical chromosome complement to their mother. www.broad.mit.e...
Broad ESTABLISHMENT_OF_CELLULAR_LOCALIZATION View Gene Set 0.002056 342 0.03462 49 Genes annotated by the GO term GO:0051649. The directed movement of a substance or cellular entity such as a protein complex or organelle to a specific location within or in the membrane of a cell. www.broad.mit.e...
Broad TRANSCRIPTION_INITIATION_FROM_RNA_POLYMERASE_II_PROMOTER View Gene Set 0.002381 29 0.03852 50 Genes annotated by the GO term GO:0006367. Processes involved in starting transcription from the RNA polymerase II promoter. www.broad.mit.e...
Broad CHROMATIN_ASSEMBLY_OR_DISASSEMBLY View Gene Set 0.002347 26 0.03852 50 Genes annotated by the GO term GO:0006333. The formation or destruction of chromatin structures. www.broad.mit.e...
Broad NEGATIVE_REGULATION_OF_TRANSCRIPTION View Gene Set 0.002506 185 0.03976 52 Genes annotated by the GO term GO:0016481. Any process that stops prevents or reduces the frequency rate or extent of transcription. www.broad.mit.e...
Broad G1_S_TRANSITION_OF_MITOTIC_CELL_CYCLE View Gene Set 0.002932 27 0.04564 53 Genes annotated by the GO term GO:0000082. Progression from G1 phase to S phase of the mitotic cell cycle. www.broad.mit.e...
Broad NEGATIVE_REGULATION_OF_TRANSCRIPTION_DNA_DEPENDENT View Gene Set 0.003076 127 0.04614 54 Genes annotated by the GO term GO:0045892. Any process that stops prevents or reduces the frequency rate or extent of DNA-dependent transcription. www.broad.mit.e...
Broad NEGATIVE_REGULATION_OF_RNA_METABOLIC_PROCESS View Gene Set 0.003076 127 0.04614 54 Genes annotated by the GO term GO:0051253. Any process that stops prevents or reduces the frequency rate or extent of the chemical reactions and pathways involving RNA. www.broad.mit.e...

Gene Set Collection: Broad.c5.CC

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad NUCLEUS View Gene Set 7.583e-21 1353 1.767e-18 1 Genes annotated by the GO term GO:0005634. A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells the nucleus contains all of the cell's chromosomes except the organellar chromosomes and is the site of RNA synthesis and processing. In some species or in specialized cell types RNA metabolism or DNA replication may be absent. www.broad.mit.e...
Broad ORGANELLE_PART View Gene Set 3.445e-20 1149 2.676e-18 2 Genes annotated by the GO term GO:0044422. Any constituent part of an organelle an organized structure of distinctive morphology and function. Includes constituent parts of the nucleus mitochondria plastids vacuoles vesicles ribosomes and the cytoskeleton but excludes the plasma membrane. www.broad.mit.e...
Broad INTRACELLULAR_ORGANELLE_PART View Gene Set 2.45e-20 1144 2.676e-18 2 Genes annotated by the GO term GO:0044446. A constituent part of an intracellular organelle an organized structure of distinctive morphology and function occurring within the cell. Includes constituent parts of the nucleus mitochondria plastids vacuoles vesicles ribosomes and the cytoskeleton but excludes the plasma membrane. www.broad.mit.e...
Broad NUCLEAR_PART View Gene Set 9.508e-17 543 5.539e-15 4 Genes annotated by the GO term GO:0044428. Any constituent part of the nucleus a membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. www.broad.mit.e...
Broad ORGANELLE_LUMEN View Gene Set 4.401e-15 434 1.709e-13 5 Genes annotated by the GO term GO:0043233. The volume enclosed by the membranes of a particular organelle e.g. endoplasmic reticulum lumen or the space between the two lipid bilayers of a double membrane surrounding an organelle e.g. nuclear membrane lumen. www.broad.mit.e...
Broad MEMBRANE_ENCLOSED_LUMEN View Gene Set 4.401e-15 434 1.709e-13 5 Genes annotated by the GO term GO:0031974. The enclosed volume within a sealed membrane or between two sealed membranes. www.broad.mit.e...
Broad NUCLEAR_LUMEN View Gene Set 4.459e-14 365 1.484e-12 7 Genes annotated by the GO term GO:0031981. The volume enclosed by the nuclear inner membrane. www.broad.mit.e...
Broad NUCLEOPLASM View Gene Set 5.969e-14 266 1.738e-12 8 Genes annotated by the GO term GO:0005654. That part of the nuclear content other than the chromosomes or the nucleolus. www.broad.mit.e...
Broad NUCLEOPLASM_PART View Gene Set 2.398e-09 202 6.209e-08 9 Genes annotated by the GO term GO:0044451. Any constituent part of the nucleoplasm that part of the nuclear content other than the chromosomes or the nucleolus. www.broad.mit.e...
Broad CHROMOSOME View Gene Set 4.477e-08 122 1.043e-06 10 Genes annotated by the GO term GO:0005694. A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information. www.broad.mit.e...
Broad CYTOPLASM View Gene Set 3.856e-07 2054 7.315e-06 11 Genes annotated by the GO term GO:0005737. All of the contents of a cell excluding the plasma membrane and nucleus but including other subcellular structures. www.broad.mit.e...
Broad MACROMOLECULAR_COMPLEX View Gene Set 3.864e-07 914 7.315e-06 11 Genes annotated by the GO term GO:0032991. A stable assembly of two or more macromolecules i.e. proteins nucleic acids carbohydrates or lipids in which the constituent parts function together. www.broad.mit.e...
Broad CHROMOSOMAL_PART View Gene Set 4.081e-07 95 7.315e-06 11 Genes annotated by the GO term GO:0044427. Any constituent part of a chromosome a structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information. www.broad.mit.e...
Broad CYTOPLASMIC_PART View Gene Set 6.466e-07 1350 1.076e-05 14 Genes annotated by the GO term GO:0044444. Any constituent part of the cytoplasm all of the contents of a cell excluding the plasma membrane and nucleus but including other subcellular structures. www.broad.mit.e...
Broad CHROMOSOMEPERICENTRIC_REGION View Gene Set 3.166e-06 31 4.917e-05 15 Genes annotated by the GO term GO:0000775. The central region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes this region corresponds to a single area of the chromosome whereas in holocentric chromosomes it is evenly distributed along the chromosome. www.broad.mit.e...
Broad DNA_DIRECTED_RNA_POLYMERASEII_HOLOENZYME View Gene Set 1.738e-05 65 0.000253 16 Genes annotated by the GO term GO:0016591. Large protein complex composed of the RNA polymerase core complex and a variety of other proteins including transcription factor complexes TFIIA D E F and H which are required for promoter recognition and the Mediator subcomplex. Catalyzes the synthesis of eukaryotic pre-mRNA. www.broad.mit.e...
Broad NON_MEMBRANE_BOUND_ORGANELLE View Gene Set 2.309e-05 613 0.0002989 17 Genes annotated by the GO term GO:0043228. Organized structure of distinctive morphology and function not bounded by a lipid bilayer membrane. Includes ribosomes the cytoskeleton and chromosomes. www.broad.mit.e...
Broad INTRACELLULAR_NON_MEMBRANE_BOUND_ORGANELLE View Gene Set 2.309e-05 613 0.0002989 17 Genes annotated by the GO term GO:0043232. Organized structure of distinctive morphology and function not bounded by a lipid bilayer membrane and occurring within the cell. Includes ribosomes the cytoskeleton and chromosomes. www.broad.mit.e...
Broad KINETOCHORE View Gene Set 2.765e-05 25 0.000339 19 Genes annotated by the GO term GO:0000776. A multisubunit complex that is located at the pericentric region of DNA and provides an attachment point for the spindle microtubules. www.broad.mit.e...
Broad PROTEIN_COMPLEX View Gene Set 3.119e-05 799 0.0003634 20 Genes annotated by the GO term GO:0043234. Any protein group composed of two or more subunits which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups such as nucleic acids metal ions or carbohydrate groups. www.broad.mit.e...
Broad MITOCHONDRION View Gene Set 4.742e-05 335 0.0005261 21 Genes annotated by the GO term GO:0005739. A semiautonomous self replicating organelle that occurs in varying numbers shapes and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration. www.broad.mit.e...
Broad RIBONUCLEOPROTEIN_COMPLEX View Gene Set 0.0001272 129 0.001347 22 Genes annotated by the GO term GO:0030529. A macromolecular complex containing both protein and RNA molecules. www.broad.mit.e...
Broad MICROTUBULE_CYTOSKELETON View Gene Set 0.0002396 146 0.002428 23 Genes annotated by the GO term GO:0015630. The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins. www.broad.mit.e...
Broad TRANSCRIPTION_FACTOR_COMPLEX View Gene Set 0.0002519 84 0.002446 24 Genes annotated by the GO term GO:0005667. Any complex distinct from RNA polymerase including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences and regulating transcription. www.broad.mit.e...
Broad CENTROSOME View Gene Set 0.000379 55 0.003532 25 Genes annotated by the GO term GO:0005813. A structure comprised of a core structure (in most organisms a pair of centrioles) and peripheral material from which a microtubule-based structure such as a spindle apparatus is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells though in animal cells it changes continually during the cell-division cycle. www.broad.mit.e...
Broad ENDOPLASMIC_RETICULUM View Gene Set 0.0004208 282 0.003771 26 Genes annotated by the GO term GO:0005783. The irregular network of unit membranes visible only by electron microscopy that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels which are often expanded into slitlike cavities called cisternae. The ER takes two forms rough (or granular) with ribosomes adhering to the outer surface and smooth (with no ribosomes attached). www.broad.mit.e...
Broad SPINDLE View Gene Set 0.0005193 37 0.004482 27 Genes annotated by the GO term GO:0005819. The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart. www.broad.mit.e...
Broad MICROTUBULE_ORGANIZING_CENTER View Gene Set 0.0008531 64 0.007099 28 Genes annotated by the GO term GO:0005815. A region in a eukaryotic cell such as a centrosome or basal body from which microtubules grow. www.broad.mit.e...
Broad ORGANELLE_MEMBRANE View Gene Set 0.001067 290 0.008355 29 Genes annotated by the GO term GO:0031090. The lipid bilayer surrounding an organelle. www.broad.mit.e...
Broad ENDOMEMBRANE_SYSTEM View Gene Set 0.001076 213 0.008355 29 Genes annotated by the GO term GO:0012505. A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum Golgi bodies vesicles cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles. www.broad.mit.e...
Broad ENVELOPE View Gene Set 0.001524 165 0.01109 31 Genes annotated by the GO term GO:0031975. A multilayered structure surrounding all or part of a cell; encompasses one or more lipid bilayers and may include a cell wall layer also includes the space between layers. www.broad.mit.e...
Broad ORGANELLE_ENVELOPE View Gene Set 0.001524 165 0.01109 31 Genes annotated by the GO term GO:0031967. A double membrane structure enclosing an organelle including two lipid bilayers and the region between them. In some cases an organelle envelope may have more than two membranes. www.broad.mit.e...
Broad NUCLEOLUS View Gene Set 0.001745 116 0.01232 33 Genes annotated by the GO term GO:0005730. A small dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein is not bounded by a limiting membrane and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA the processing of this RNA into 5.8S 18S and 28S components of ribosomal RNA and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome. www.broad.mit.e...
Broad MEDIATOR_COMPLEX View Gene Set 0.0018 18 0.01233 34 Genes annotated by the GO term GO:0000119. A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription. www.broad.mit.e...
Broad LATE_ENDOSOME View Gene Set 0.003422 12 0.02048 35 Genes annotated by the GO term GO:0005770. A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear being concentrated near the microtubule organizing center. www.broad.mit.e...
Broad DNA_DIRECTED_RNA_POLYMERASE_COMPLEX View Gene Set 0.003428 16 0.02048 35 Genes annotated by the GO term GO:0000428. A protein complex that possesses DNA-directed RNA polymerase activity. www.broad.mit.e...
Broad NUCLEAR_ENVELOPE View Gene Set 0.00341 71 0.02048 35 Genes annotated by the GO term GO:0005635. The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space a gap of width 20-40 nm (also called the perinuclear space). www.broad.mit.e...
Broad RNA_POLYMERASE_COMPLEX View Gene Set 0.003428 16 0.02048 35 Genes annotated by the GO term GO:0030880. Any complex that possesses RNA polymerase activity; generally comprises a catalytic subunit and one or more additional subunits. www.broad.mit.e...
Broad NUCLEAR_DNA_DIRECTED_RNA_POLYMERASE_COMPLEX View Gene Set 0.003428 16 0.02048 35 Genes annotated by the GO term GO:0055029. A protein complex located in the nucleus that possesses DNA-directed RNA polymerase activity. www.broad.mit.e...
Broad SPINDLE_MICROTUBULE View Gene Set 0.005922 15 0.0345 40 Genes annotated by the GO term GO:0005876. Any microtubule that is part of a mitotic or meiotic spindle; anchored at one spindle pole. www.broad.mit.e...
Broad HETEROGENEOUS_NUCLEAR_RIBONUCLEOPROTEIN_COMPLEX View Gene Set 0.007768 9 0.04309 41 Genes annotated by the GO term GO:0030530. Particulate complex of heterogeneous nuclear RNA (hnRNA; a heterogeneous mixture of RNA molecules of high Mr with a rapid turnover rate that occurs in cell nuclei during protein synthesis; it is the form of RNA synthesized in eukaryotes by RNA polymerase II that which is translated into protein) with protein which is cell-specific and heterogeneous. The protein component may play a role in the processing of the hnRNA to mRNA. www.broad.mit.e...
Broad CONDENSED_CHROMOSOME View Gene Set 0.007596 32 0.04309 41 Genes annotated by the GO term GO:0000793. A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure. www.broad.mit.e...
Broad NUCLEAR_MATRIX View Gene Set 0.008117 12 0.04398 43 Genes annotated by the GO term GO:0016363. The dense fibrillar network lying on the inner side of the nuclear membrane. www.broad.mit.e...

Gene Set Collection: Broad.c5.MF

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad RNA_BINDING View Gene Set 1.169e-06 236 0.0004628 1 Genes annotated by the GO term GO:0003723. Interacting selectively with an RNA molecule or a portion thereof. www.broad.mit.e...
Broad LIGASE_ACTIVITY View Gene Set 6.761e-05 97 0.01339 2 Genes annotated by the GO term GO:0016874. Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6. www.broad.mit.e...
Broad DOUBLE_STRANDED_DNA_BINDING View Gene Set 0.0001057 32 0.01395 3 Genes annotated by the GO term GO:0003690. Interacting selectively with double-stranded DNA. www.broad.mit.e...
Broad HYDROLASE_ACTIVITY_ACTING_ON_ACID_ANHYDRIDES View Gene Set 0.0005 224 0.02475 4 Genes annotated by the GO term GO:0016817. Catalysis of the hydrolysis of any acid anhydride. www.broad.mit.e...
Broad LIGASE_ACTIVITY_FORMING_CARBON_NITROGEN_BONDS View Gene Set 0.0004764 68 0.02475 4 Genes annotated by the GO term GO:0016879. Catalysis of the ligation of two substances via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage usually in a nucleoside triphosphate. www.broad.mit.e...
Broad STRUCTURE_SPECIFIC_DNA_BINDING View Gene Set 0.0002866 55 0.02475 4 Genes annotated by the GO term GO:0043566. Interacting selectively with DNA of a specific structure or configuration e.g. triplex DNA binding or bent DNA binding. www.broad.mit.e...
Broad GENERAL_RNA_POLYMERASE_II_TRANSCRIPTION_FACTOR_ACTIVITY View Gene Set 0.0003886 32 0.02475 4 Genes annotated by the GO term GO:0016251. Any function that supports basal (unregulated) transcription of genes by core RNA polymerase II. Five general transcription factors are necessary and sufficient for such basal transcription in yeast: TFIIB TFIID TFIIE TFIIF TFIIH and TATA-binding protein (TBF). www.broad.mit.e...
Broad DNA_BINDING View Gene Set 0.0003657 587 0.02475 4 Genes annotated by the GO term GO:0003677. Interacting selectively with DNA (deoxyribonucleic acid). www.broad.mit.e...
Broad PYROPHOSPHATASE_ACTIVITY View Gene Set 0.001025 222 0.04509 9 Genes annotated by the GO term GO:0016462. Catalysis of the hydrolysis of a pyrophosphate bond between two phosphate groups leaving one phosphate on each of the two fragments. www.broad.mit.e...

Gene Set Collection: PMID

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
PMID 15302935 View Gene Set 3.856e-13 773 9.667e-10 1 Large-scale characterization of HeLa cell nuclear phosphoproteins. www.ncbi.nlm.ni...
PMID 17643375 View Gene Set 1.027e-12 391 1.287e-09 2 Systematic analysis of the protein interaction network for the human transcription machinery reveals the identity of the 7SK capping enzyme. www.ncbi.nlm.ni...
PMID 15635413 View Gene Set 8.432e-12 421 7.047e-09 3 Nucleolar proteome dynamics. www.ncbi.nlm.ni...
PMID 16565220 View Gene Set 8.623e-11 210 5.404e-08 4 Phosphoproteome analysis of the human mitotic spindle. www.ncbi.nlm.ni...
PMID 16964243 View Gene Set 2.938e-09 504 1.473e-06 5 A probability-based approach for high-throughput protein phosphorylation analysis and site localization. www.ncbi.nlm.ni...
PMID 11042152 View Gene Set 7.282e-09 315 3.043e-06 6 Cloning and functional analysis of cDNAs with open reading frames for 300 previously undefined genes expressed in CD34+ hematopoietic stem/progenitor cells. www.ncbi.nlm.ni...
PMID 15057823 View Gene Set 1.225e-08 166 4.386e-06 7 The DNA sequence and analysis of human chromosome 13. www.ncbi.nlm.ni...
PMID 11230166 View Gene Set 2.867e-08 748 7.188e-06 8 Toward a catalog of human genes and proteins: sequencing and analysis of 500 novel complete protein coding human cDNAs. www.ncbi.nlm.ni...
PMID 12791985 View Gene Set 2.721e-08 37 7.188e-06 8 Sensing DNA damage through ATRIP recognition of RPA-ssDNA complexes. www.ncbi.nlm.ni...
PMID 12853948 View Gene Set 2.444e-08 419 7.188e-06 8 The DNA sequence of human chromosome 7. www.ncbi.nlm.ni...
PMID 12226669 View Gene Set 1.489e-07 108 3.394e-05 11 Comprehensive proteomic analysis of the human spliceosome. www.ncbi.nlm.ni...
PMID 10810093 View Gene Set 4.019e-07 151 8.396e-05 12 Identification of novel human genes evolutionarily conserved in Caenorhabditis elegans by comparative proteomics. www.ncbi.nlm.ni...
PMID 18950845 View Gene Set 6.927e-07 88 0.0001336 13 Evaluating new candidate SNPs as low penetrance risk factors in sporadic breast cancer: a two-stage Spanish case-control study. www.ncbi.nlm.ni...
PMID 18270339 View Gene Set 2.177e-06 57 0.0003898 14 Comprehensive analysis of DNA repair gene variants and risk of meningioma. www.ncbi.nlm.ni...
PMID 10931946 View Gene Set 2.983e-06 118 0.0004986 15 Gene expression profiling in the human hypothalamus-pituitary-adrenal axis and full-length cDNA cloning. www.ncbi.nlm.ni...
PMID 20508983 View Gene Set 4.457e-06 102 0.0006686 16 Centrosome-related genes genetic variation and risk of breast cancer. www.ncbi.nlm.ni...
PMID 9847074 View Gene Set 4.534e-06 620 0.0006686 16 Toward a complete human genome sequence. www.ncbi.nlm.ni...
PMID 19064565 View Gene Set 5.806e-06 13 0.0008087 18 Common single-nucleotide polymorphisms in DNA double-strand break repair genes and breast cancer risk. www.ncbi.nlm.ni...
PMID 17148452 View Gene Set 6.983e-06 87 0.0009213 19 Characterization of the interactome of the human MutL homologues MLH1 PMS1 and PMS2. www.ncbi.nlm.ni...
PMID 10048485 View Gene Set 9.229e-06 101 0.0009466 20 Prediction of the coding sequences of unidentified human genes. XII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro. www.ncbi.nlm.ni...
PMID 15489336 View Gene Set 9.421e-06 722 0.0009466 20 From ORFeome to biology: a functional genomics pipeline. www.ncbi.nlm.ni...
PMID 15707391 View Gene Set 9.259e-06 23 0.0009466 20 DNA-dependent phosphorylation of Chk1 and Claspin in a human cell-free system. www.ncbi.nlm.ni...
PMID 17478428 View Gene Set 7.811e-06 10 0.0009466 20 A proteomic analysis of ataxia telangiectasia-mutated (ATM)/ATM-Rad3-related (ATR) substrates identifies the ubiquitin-proteasome system as a regulator for DNA damage checkpoints. www.ncbi.nlm.ni...
PMID 20496165 View Gene Set 9.44e-06 68 0.0009466 20 Comprehensive screen of genetic variation in DNA repair pathway genes and postmenopausal breast cancer risk. www.ncbi.nlm.ni...
PMID 20522537 View Gene Set 7.98e-06 73 0.0009466 20 Variation within DNA repair pathway genes and risk of multiple sclerosis. www.ncbi.nlm.ni...
PMID 11790298 View Gene Set 1.084e-05 208 0.001046 26 Directed proteomic analysis of the human nucleolus. www.ncbi.nlm.ni...
PMID 11256614 View Gene Set 1.206e-05 522 0.00108 27 Systematic subcellular localization of novel proteins identified by large-scale cDNA sequencing. www.ncbi.nlm.ni...
PMID 19584272 View Gene Set 1.204e-05 11 0.00108 27 Modification of ovarian cancer risk by BRCA1/2-interacting genes in a multicenter cohort of BRCA1/2 mutation carriers. www.ncbi.nlm.ni...
PMID 19536092 View Gene Set 1.333e-05 55 0.001153 29 Explorative study to identify novel candidate genes related to oxaliplatin efficacy and toxicity using a DNA repair array. www.ncbi.nlm.ni...
PMID 16381901 View Gene Set 1.398e-05 720 0.001168 30 The LIFEdb database in 2006. www.ncbi.nlm.ni...
PMID 2288909 View Gene Set 1.836e-05 30 0.001485 31 Multiple genes encoding zinc finger domains are expressed in human T cells. www.ncbi.nlm.ni...
PMID 19116388 View Gene Set 2.161e-05 37 0.001693 32 A field synopsis on low-penetrance variants in DNA repair genes and cancer susceptibility. www.ncbi.nlm.ni...
PMID 15009096 View Gene Set 2.701e-05 39 0.001992 33 Proteomics analysis of the centromere complex from HeLa interphase cells: UV-damaged DNA binding protein 1 (DDB-1) is a component of the CEN-complex while BMI-1 is transiently co-localized with the centromeric region in interphase. www.ncbi.nlm.ni...
PMID 8274451 View Gene Set 2.693e-05 16 0.001992 33 Identification of 21 novel human protein kinases including 3 members of a family related to the cell cycle regulator nimA of Aspergillus nidulans. www.ncbi.nlm.ni...
PMID 19237606 View Gene Set 2.854e-05 84 0.002044 35 Genetic polymorphisms in 85 DNA repair genes and bladder cancer risk. www.ncbi.nlm.ni...
PMID 12614612 View Gene Set 4.053e-05 19 0.002822 36 Interaction and assembly of murine pre-replicative complex proteins in yeast and mouse cells. www.ncbi.nlm.ni...
PMID 9121429 View Gene Set 4.515e-05 39 0.003059 37 The human immunodeficiency virus transactivator Tat interacts with the RNA polymerase II holoenzyme. www.ncbi.nlm.ni...
PMID 10783165 View Gene Set 7.247e-05 12 0.004781 38 BASC a super complex of BRCA1-associated proteins involved in the recognition and repair of aberrant DNA structures. www.ncbi.nlm.ni...
PMID 15226314 View Gene Set 7.546e-05 20 0.004851 39 Human claspin is a ring-shaped DNA-binding protein with high affinity to branched DNA structures. www.ncbi.nlm.ni...
PMID 19690177 View Gene Set 8.726e-05 31 0.005469 40 Polymorphic variants in hereditary pancreatic cancer genes are not associated with pancreatic cancer risk. www.ncbi.nlm.ni...
PMID 11877377 View Gene Set 0.0001076 11 0.006579 41 SMC1 is a downstream effector in the ATM/NBS1 branch of the human S-phase checkpoint. www.ncbi.nlm.ni...
PMID 12690205 View Gene Set 0.0001163 528 0.006703 42 Human chromosome 7: DNA sequence and biology. www.ncbi.nlm.ni...
PMID 15146197 View Gene Set 0.0001176 693 0.006703 42 Transcriptome characterization elucidates signaling networks that control human ES cell growth and differentiation. www.ncbi.nlm.ni...
PMID 15324660 View Gene Set 0.0001123 242 0.006703 42 Proteomic functional and domain-based analysis of in vivo 14-3-3 binding proteins involved in cytoskeletal regulation and cellular organization. www.ncbi.nlm.ni...
PMID 10608806 View Gene Set 0.0001272 25 0.007086 45 Substrate specificities and identification of putative substrates of ATM kinase family members. www.ncbi.nlm.ni...
PMID 19596235 View Gene Set 0.0001612 85 0.008787 46 Mammalian BTBD12/SLX4 assembles a Holliday junction resolvase and is required for DNA repair. www.ncbi.nlm.ni...
PMID 10231032 View Gene Set 0.0001708 103 0.009109 47 Prediction of the coding sequences of unidentified human genes. XIII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro. www.ncbi.nlm.ni...
PMID 7865130 View Gene Set 0.0001867 20 0.00975 48 Isolation of cDNA clones for 42 different Kr├╝ppel-related zinc finger proteins expressed in the human monoblast cell line U-937. www.ncbi.nlm.ni...
PMID 14578343 View Gene Set 0.0002183 19 0.01117 49 Phosphopeptide binding specificities of BRCA1 COOH-terminal (BRCT) domains. www.ncbi.nlm.ni...
PMID 11149944 View Gene Set 0.0002288 18 0.01147 50 Serological detection of cutaneous T-cell lymphoma-associated antigens. www.ncbi.nlm.ni...
PMID 2014798 View Gene Set 0.0002369 14 0.01165 51 Twenty-seven nonoverlapping zinc finger cDNAs from human T cells map to nine different chromosomes with apparent clustering. www.ncbi.nlm.ni...
PMID 11095689 View Gene Set 0.0002793 17 0.01346 52 The human homolog of Saccharomyces cerevisiae Mcm10 interacts with replication factors and dissociates from nuclease-resistant nuclear structures in G(2) phase. www.ncbi.nlm.ni...
PMID 15815621 View Gene Set 0.0002847 437 0.01347 53 Generation and annotation of the DNA sequences of human chromosomes 2 and 4. www.ncbi.nlm.ni...
PMID 12171929 View Gene Set 0.0003071 31 0.014 54 A proteomics approach to identify proliferating cell nuclear antigen (PCNA)-binding proteins in human cell lysates. Identification of the human CHL12/RFCs2-5 complex as a novel PCNA-binding protein. www.ncbi.nlm.ni...
PMID 14654843 View Gene Set 0.0003062 26 0.014 54 Proteomic characterization of the human centrosome by protein correlation profiling. www.ncbi.nlm.ni...
PMID 20085707 View Gene Set 0.0003228 42 0.01445 56 Aire's partners in the molecular control of immunological tolerance. www.ncbi.nlm.ni...
PMID 17289661 View Gene Set 0.0003291 35 0.01447 57 Molecular composition of IMP1 ribonucleoprotein granules. www.ncbi.nlm.ni...
PMID 15334068 View Gene Set 0.0003515 19 0.01519 58 Suppression subtractive hybridization and expression profiling identifies a unique set of genes overexpressed in non-small-cell lung cancer. www.ncbi.nlm.ni...
PMID 20150366 View Gene Set 0.0003913 25 0.01654 59 DNA repair gene polymorphisms and risk of adult meningioma glioma and acoustic neuroma. www.ncbi.nlm.ni...
PMID 7829101 View Gene Set 0.0003959 69 0.01654 59 Isolation of novel and known genes from a human fetal cochlear cDNA library using subtractive hybridization and differential screening. www.ncbi.nlm.ni...
PMID 12743021 View Gene Set 0.0004862 18 0.01998 61 Differential expansion of zinc-finger transcription factor loci in homologous human and mouse gene clusters. www.ncbi.nlm.ni...
PMID 11329013 View Gene Set 0.0005076 143 0.02053 62 Creation of genome-wide protein expression libraries using random activation of gene expression. www.ncbi.nlm.ni...
PMID 10436018 View Gene Set 0.0005237 15 0.02084 63 The Cdc6 nucleotide-binding site regulates its activity in DNA replication in human cells. www.ncbi.nlm.ni...
PMID 11991638 View Gene Set 0.0005722 74 0.02241 64 Purification and characterization of native spliceosomes suitable for three-dimensional structural analysis. www.ncbi.nlm.ni...
PMID 8849451 View Gene Set 0.0005839 46 0.02252 65 Tat-SF1: cofactor for stimulation of transcriptional elongation by HIV-1 Tat. www.ncbi.nlm.ni...
PMID 16051665 View Gene Set 0.0006159 15 0.02339 66 Proteomic analysis of steady-state nuclear hormone receptor coactivator complexes. www.ncbi.nlm.ni...
PMID 14715245 View Gene Set 0.0006784 23 0.02539 67 Cloning and enzymatic analysis of 22 novel human ubiquitin-specific proteases. www.ncbi.nlm.ni...
PMID 12045100 View Gene Set 0.0006988 18 0.02576 68 DNA replication in eukaryotic cells. www.ncbi.nlm.ni...
PMID 11125146 View Gene Set 0.0007814 10 0.02839 69 Inhibition of eukaryotic DNA replication by geminin binding to Cdt1. www.ncbi.nlm.ni...
PMID 15252450 View Gene Set 0.0008781 49 0.03016 70 Lineage-specific gene duplication and loss in human and great ape evolution. www.ncbi.nlm.ni...
PMID 16622419 View Gene Set 0.0008775 16 0.03016 70 The human CENP-A centromeric nucleosome-associated complex. www.ncbi.nlm.ni...
PMID 9512541 View Gene Set 0.0008702 26 0.03016 70 Isolation and characterization of a human cDNA for mRNA 5'-capping enzyme. www.ncbi.nlm.ni...
PMID 9790902 View Gene Set 0.0008702 26 0.03016 70 Cloning and characterization of three human cDNAs encoding mRNA (guanine-7-)-methyltransferase an mRNA cap methylase. www.ncbi.nlm.ni...
PMID 15761153 View Gene Set 0.0008937 211 0.03028 74 High-throughput mapping of a dynamic signaling network in mammalian cells. www.ncbi.nlm.ni...
PMID 19950226 View Gene Set 0.0009599 24 0.03209 75 Single nucleotide polymorphisms in miRNA binding sites and miRNA genes as breast/ovarian cancer risk modifiers in Jewish high-risk women. www.ncbi.nlm.ni...
PMID 11551930 View Gene Set 0.00105 11 0.03422 76 Plk3 functionally links DNA damage to cell cycle arrest and apoptosis at least in part via the p53 pathway. www.ncbi.nlm.ni...
PMID 9872452 View Gene Set 0.001051 101 0.03422 76 Prediction of the coding sequences of unidentified human genes. XI. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro. www.ncbi.nlm.ni...
PMID 11991713 View Gene Set 0.001091 23 0.03507 78 An evaluation of the assembly of an approximately 15-Mb region on human chromosome 13q32-q33 linked to bipolar disorder and schizophrenia. www.ncbi.nlm.ni...
PMID 7821789 View Gene Set 0.001106 59 0.03511 79 Construction of a human full-length cDNA bank. www.ncbi.nlm.ni...
PMID 19351817 View Gene Set 0.001166 63 0.03655 80 Genetic mutations associated with cigarette smoking in pancreatic cancer. www.ncbi.nlm.ni...
PMID 17363900 View Gene Set 0.00124 14 0.03838 81 The human Nup107-160 nuclear pore subcomplex contributes to proper kinetochore functions. www.ncbi.nlm.ni...
PMID 17577209 View Gene Set 0.001434 28 0.04331 82 The interactome of the histone gene regulatory factor HiNF-P suggests novel cell cycle related roles in transcriptional control and RNA processing. www.ncbi.nlm.ni...
PMID 9409616 View Gene Set 0.001424 17 0.04331 82 Purification and cDNA cloning of the AdoMet-binding subunit of the human mRNA (N6-adenosine)-methyltransferase. www.ncbi.nlm.ni...
PMID 16622420 View Gene Set 0.001468 14 0.04382 84 The CENP-H-I complex is required for the efficient incorporation of newly synthesized CENP-A into centromeres. www.ncbi.nlm.ni...
PMID 15175163 View Gene Set 0.001558 47 0.04596 85 A set of consensus mammalian mediator subunits identified by multidimensional protein identification technology. www.ncbi.nlm.ni...
PMID 12963728 View Gene Set 0.001634 21 0.04764 86 Identification of new subunits of the multiprotein mammalian TRRAP/TIP60-containing histone acetyltransferase complex. www.ncbi.nlm.ni...

Gene Set Collection: ChromosomalTiles5Mb

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null chr1_90-95Mb View Gene Set 3.432e-05 24 0.01275 1 Genomic tile: chr1 ; 90000001-95000001 Mb genome.ucsc.edu...
Null chr1_92.5-97.5Mb View Gene Set 2.599e-05 20 0.01275 1 Genomic tile: chr1 ; 92500001-97500001 Mb genome.ucsc.edu...
Null chr2_170-175Mb View Gene Set 2.575e-05 30 0.01275 1 Genomic tile: chr2 ; 170000001-175000001 Mb genome.ucsc.edu...
Null chr13_45-50Mb View Gene Set 0.0001052 25 0.01639 4 Genomic tile: chr13 ; 45000001-50000001 Mb genome.ucsc.edu...
Null chr14_65-70Mb View Gene Set 0.0001471 27 0.01639 4 Genomic tile: chr14 ; 65000001-70000001 Mb genome.ucsc.edu...
Null chr2_157.5-162.5Mb View Gene Set 6.829e-05 18 0.01639 4 Genomic tile: chr2 ; 157500001-162500001 Mb genome.ucsc.edu...
Null chr2_45-50Mb View Gene Set 0.0001096 20 0.01639 4 Genomic tile: chr2 ; 45000001-50000001 Mb genome.ucsc.edu...
Null chr4_170-175Mb View Gene Set 0.0001379 12 0.01639 4 Genomic tile: chr4 ; 170000001-175000001 Mb genome.ucsc.edu...
Null chr7_102.5-107.5Mb View Gene Set 0.0001302 27 0.01639 4 Genomic tile: chr7 ; 102500001-107500001 Mb genome.ucsc.edu...
Null chr7_90-95Mb View Gene Set 0.0001315 26 0.01639 4 Genomic tile: chr7 ; 90000001-95000001 Mb genome.ucsc.edu...
Null chr15_45-50Mb View Gene Set 0.0001635 28 0.01656 11 Genomic tile: chr15 ; 45000001-50000001 Mb genome.ucsc.edu...
Null chr14_47.5-52.5Mb View Gene Set 0.0002957 33 0.02565 12 Genomic tile: chr14 ; 47500001-52500001 Mb genome.ucsc.edu...
Null chr15_47.5-52.5Mb View Gene Set 0.0004136 26 0.02565 12 Genomic tile: chr15 ; 47500001-52500001 Mb genome.ucsc.edu...
Null chr2_35-40Mb View Gene Set 0.0003999 20 0.02565 12 Genomic tile: chr2 ; 35000001-40000001 Mb genome.ucsc.edu...
Null chr4_52.5-57.5Mb View Gene Set 0.0004145 26 0.02565 12 Genomic tile: chr4 ; 52500001-57500001 Mb genome.ucsc.edu...
Null chr6_135-140Mb View Gene Set 0.000361 27 0.02565 12 Genomic tile: chr6 ; 135000001-140000001 Mb genome.ucsc.edu...
Null chr6_82.5-87.5Mb View Gene Set 0.000327 12 0.02565 12 Genomic tile: chr6 ; 82500001-87500001 Mb genome.ucsc.edu...
Null chr7_87.5-92.5Mb View Gene Set 0.0004029 15 0.02565 12 Genomic tile: chr7 ; 87500001-92500001 Mb genome.ucsc.edu...
Null chr12_62.5-67.5Mb View Gene Set 0.0005179 21 0.03036 19 Genomic tile: chr12 ; 62500001-67500001 Mb genome.ucsc.edu...
Null chr12_25-30Mb View Gene Set 0.0006196 20 0.03252 20 Genomic tile: chr12 ; 25000001-30000001 Mb genome.ucsc.edu...
Null chr12_27.5-32.5Mb View Gene Set 0.0007215 17 0.03252 20 Genomic tile: chr12 ; 27500001-32500001 Mb genome.ucsc.edu...
Null chr12_72.5-77.5Mb View Gene Set 0.0009934 13 0.03252 20 Genomic tile: chr12 ; 72500001-77500001 Mb genome.ucsc.edu...
Null chr14_37.5-42.5Mb View Gene Set 0.000888 7 0.03252 20 Genomic tile: chr14 ; 37500001-42500001 Mb genome.ucsc.edu...
Null chr14_45-50Mb View Gene Set 0.0008744 20 0.03252 20 Genomic tile: chr14 ; 45000001-50000001 Mb genome.ucsc.edu...
Null chr14_62.5-67.5Mb View Gene Set 0.0008117 31 0.03252 20 Genomic tile: chr14 ; 62500001-67500001 Mb genome.ucsc.edu...
Null chr15_50-55Mb View Gene Set 0.0009842 19 0.03252 20 Genomic tile: chr15 ; 50000001-55000001 Mb genome.ucsc.edu...
Null chr18_15-20Mb View Gene Set 0.0009062 16 0.03252 20 Genomic tile: chr18 ; 15000001-20000001 Mb genome.ucsc.edu...
Null chr1_87.5-92.5Mb View Gene Set 0.0009921 20 0.03252 20 Genomic tile: chr1 ; 87500001-92500001 Mb genome.ucsc.edu...
Null chr1_95-100Mb View Gene Set 0.0008327 11 0.03252 20 Genomic tile: chr1 ; 95000001-100000001 Mb genome.ucsc.edu...
Null chr2_160-165Mb View Gene Set 0.0008182 22 0.03252 20 Genomic tile: chr2 ; 160000001-165000001 Mb genome.ucsc.edu...
Null chr2_167.5-172.5Mb View Gene Set 0.000666 22 0.03252 20 Genomic tile: chr2 ; 167500001-172500001 Mb genome.ucsc.edu...
Null chr2_42.5-47.5Mb View Gene Set 0.0009198 29 0.03252 20 Genomic tile: chr2 ; 42500001-47500001 Mb genome.ucsc.edu...
Null chr3_195-200Mb View Gene Set 0.001051 40 0.03252 20 Genomic tile: chr3 ; 195000001-200000001 Mb genome.ucsc.edu...
Null chr4_167.5-172.5Mb View Gene Set 0.00105 12 0.03252 20 Genomic tile: chr4 ; 167500001-172500001 Mb genome.ucsc.edu...
Null chr6_107.5-112.5Mb View Gene Set 0.001 27 0.03252 20 Genomic tile: chr6 ; 107500001-112500001 Mb genome.ucsc.edu...
Null chr6_80-85Mb View Gene Set 0.0007933 14 0.03252 20 Genomic tile: chr6 ; 80000001-85000001 Mb genome.ucsc.edu...
Null chr15_52.5-57.5Mb View Gene Set 0.001109 23 0.03273 37 Genomic tile: chr15 ; 52500001-57500001 Mb genome.ucsc.edu...
Null chr1_75-80Mb View Gene Set 0.001117 19 0.03273 37 Genomic tile: chr1 ; 75000001-80000001 Mb genome.ucsc.edu...
Null chr4_150-155Mb View Gene Set 0.001278 12 0.03558 39 Genomic tile: chr4 ; 150000001-155000001 Mb genome.ucsc.edu...
Null chrX_115-120Mb View Gene Set 0.001269 23 0.03558 39 Genomic tile: chrX ; 115000001-120000001 Mb genome.ucsc.edu...
Null chr6_127.5-132.5Mb View Gene Set 0.001616 16 0.04391 41 Genomic tile: chr6 ; 127500001-132500001 Mb genome.ucsc.edu...
Null chr14_25-30Mb View Gene Set 0.00168 7 0.04457 42 Genomic tile: chr14 ; 25000001-30000001 Mb genome.ucsc.edu...
Null chr16_50-55Mb View Gene Set 0.001745 12 0.04522 43 Genomic tile: chr16 ; 50000001-55000001 Mb genome.ucsc.edu...
Null chr10_115-120Mb View Gene Set 0.002084 23 0.04672 44 Genomic tile: chr10 ; 115000001-120000001 Mb genome.ucsc.edu...
Null chr10_30-35Mb View Gene Set 0.002338 13 0.04672 44 Genomic tile: chr10 ; 30000001-35000001 Mb genome.ucsc.edu...
Null chr10_57.5-62.5Mb View Gene Set 0.002214 8 0.04672 44 Genomic tile: chr10 ; 57500001-62500001 Mb genome.ucsc.edu...
Null chr11_107.5-112.5Mb View Gene Set 0.002128 27 0.04672 44 Genomic tile: chr11 ; 107500001-112500001 Mb genome.ucsc.edu...
Null chr12_30-35Mb View Gene Set 0.002158 14 0.04672 44 Genomic tile: chr12 ; 30000001-35000001 Mb genome.ucsc.edu...
Null chr13_15-20Mb View Gene Set 0.002338 15 0.04672 44 Genomic tile: chr13 ; 15000001-20000001 Mb genome.ucsc.edu...
Null chr13_97.5-102.5Mb View Gene Set 0.002247 13 0.04672 44 Genomic tile: chr13 ; 97500001-102500001 Mb genome.ucsc.edu...
Null chr18_17.5-22.5Mb View Gene Set 0.002021 20 0.04672 44 Genomic tile: chr18 ; 17500001-22500001 Mb genome.ucsc.edu...
Null chr1_80-85Mb View Gene Set 0.002349 9 0.04672 44 Genomic tile: chr1 ; 80000001-85000001 Mb genome.ucsc.edu...
Null chr1_82.5-87.5Mb View Gene Set 0.001951 21 0.04672 44 Genomic tile: chr1 ; 82500001-87500001 Mb genome.ucsc.edu...
Null chr2_32.5-37.5Mb View Gene Set 0.002153 16 0.04672 44 Genomic tile: chr2 ; 32500001-37500001 Mb genome.ucsc.edu...
Null chr2_55-60Mb View Gene Set 0.002243 11 0.04672 44 Genomic tile: chr2 ; 55000001-60000001 Mb genome.ucsc.edu...
Null chr4_125-130Mb View Gene Set 0.002132 8 0.04672 44 Genomic tile: chr4 ; 125000001-130000001 Mb genome.ucsc.edu...
Null chr14_35-40Mb View Gene Set 0.002509 16 0.04735 57 Genomic tile: chr14 ; 35000001-40000001 Mb genome.ucsc.edu...
Null chr5_42.5-47.5Mb View Gene Set 0.00255 13 0.04735 57 Genomic tile: chr5 ; 42500001-47500001 Mb genome.ucsc.edu...
Null chr5_70-75Mb View Gene Set 0.002424 20 0.04735 57 Genomic tile: chr5 ; 70000001-75000001 Mb genome.ucsc.edu...
Null chr6_90-95Mb View Gene Set 0.002484 9 0.04735 57 Genomic tile: chr6 ; 90000001-95000001 Mb genome.ucsc.edu...
Null chr14_27.5-32.5Mb View Gene Set 0.002649 12 0.0476 61 Genomic tile: chr14 ; 27500001-32500001 Mb genome.ucsc.edu...
Null chr3_142.5-147.5Mb View Gene Set 0.002643 16 0.0476 61 Genomic tile: chr3 ; 142500001-147500001 Mb genome.ucsc.edu...
Null chr18_5-10Mb View Gene Set 0.0027 18 0.04774 63 Genomic tile: chr18 ; 5000001-10000001 Mb genome.ucsc.edu...
Null chr12_22.5-27.5Mb View Gene Set 0.00277 15 0.04821 64 Genomic tile: chr12 ; 22500001-27500001 Mb genome.ucsc.edu...
Null chr12_60-65Mb View Gene Set 0.002844 21 0.04852 65 Genomic tile: chr12 ; 60000001-65000001 Mb genome.ucsc.edu...
Null chr14_55-60Mb View Gene Set 0.002875 27 0.04852 65 Genomic tile: chr14 ; 55000001-60000001 Mb genome.ucsc.edu...
Null chr1_77.5-82.5Mb View Gene Set 0.003069 11 0.04909 67 Genomic tile: chr1 ; 77500001-82500001 Mb genome.ucsc.edu...
Null chr5_72.5-77.5Mb View Gene Set 0.002992 25 0.04909 67 Genomic tile: chr5 ; 72500001-77500001 Mb genome.ucsc.edu...
Null chr6_87.5-92.5Mb View Gene Set 0.003085 19 0.04909 67 Genomic tile: chr6 ; 87500001-92500001 Mb genome.ucsc.edu...
Null chr7_105-110Mb View Gene Set 0.002998 18 0.04909 67 Genomic tile: chr7 ; 105000001-110000001 Mb genome.ucsc.edu...

Gene Set Collection: Prosite

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null PS50805 View Gene Set 2.622e-10 415 1.927e-07 1 KRAB expasy.org/pros...
Null PS50102 View Gene Set 7.482e-09 229 2.749e-06 2 RRM expasy.org/pros...
Null PS00028 View Gene Set 1.75e-07 830 4.287e-05 3 ZINC_FINGER_C2H2_1 expasy.org/pros...
Null PS50157 View Gene Set 1.1e-06 811 0.0002022 4 ZINC_FINGER_C2H2_2 expasy.org/pros...
Null PS51194 View Gene Set 1.57e-05 113 0.002308 5 HELICASE_CTER expasy.org/pros...
Null PS51192 View Gene Set 2.629e-05 112 0.003221 6 HELICASE_ATP_BIND_1 expasy.org/pros...
Null PS50896 View Gene Set 5.68e-05 28 0.005964 7 LISH expasy.org/pros...
Null PS50294 View Gene Set 0.0002732 245 0.0251 8 WD_REPEATS_REGION expasy.org/pros...
Null PS50082 View Gene Set 0.0004176 233 0.0341 9 WD_REPEATS_2 expasy.org/pros...
Null PS50297 View Gene Set 0.0005226 285 0.03841 10 ANK_REP_REGION expasy.org/pros...
Null PS50097 View Gene Set 0.0006694 141 0.04473 11 BTB expasy.org/pros...
Null PS00678 View Gene Set 0.0007344 168 0.04498 12 WD_REPEATS_1 expasy.org/pros...

Gene Set Collection: Enzyme

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null EC:6.3.2.19 View Gene Set 3.276e-05 79 0.005176 1 Ubiquitin--protein ligase expasy.org/enzy...

Gene Set Collection: ppi.BioGRID

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null ppi.155871 View Gene Set 3.043e-08 236 6.99e-05 1 Protein-protein-interaction for 155871 www.ncbi.nlm.ni...
Null ppi.YY1 View Gene Set 3.457e-06 34 0.003971 2 Protein-protein-interaction for YY1 www.ncbi.nlm.ni...
Null ppi.MEPCE View Gene Set 1.262e-05 147 0.009661 3 Protein-protein-interaction for MEPCE www.ncbi.nlm.ni...
Null ppi.MAP3K7 View Gene Set 2.498e-05 11 0.01435 4 Protein-protein-interaction for MAP3K7 www.ncbi.nlm.ni...
Null ppi.ORC6L View Gene Set 8.678e-05 11 0.03987 5 Protein-protein-interaction for ORC6L www.ncbi.nlm.ni...

Gene Set Collection: ppi.anyDB

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null ppi.155871 View Gene Set 7.592e-08 251 0.0002728 1 Protein-protein-interaction for 155871 www.ncbi.nlm.ni...
Null ppi.YY1 View Gene Set 2.114e-07 39 0.0003799 2 Protein-protein-interaction for YY1 www.ncbi.nlm.ni...
Null ppi.MEPCE View Gene Set 1.262e-05 147 0.01512 3 Protein-protein-interaction for MEPCE www.ncbi.nlm.ni...
Null ppi.ORC3L View Gene Set 2.044e-05 16 0.01836 4 Protein-protein-interaction for ORC3L www.ncbi.nlm.ni...
Null ppi.ORC6L View Gene Set 2.663e-05 15 0.01914 5 Protein-protein-interaction for ORC6L www.ncbi.nlm.ni...
Null ppi.SMC1A View Gene Set 5.616e-05 23 0.03364 6 Protein-protein-interaction for SMC1A www.ncbi.nlm.ni...
Null ppi.RNPS1 View Gene Set 7.19e-05 44 0.03691 7 Protein-protein-interaction for RNPS1 www.ncbi.nlm.ni...
Null ppi.SMAD7 View Gene Set 0.0001218 17 0.04377 8 Protein-protein-interaction for SMAD7 www.ncbi.nlm.ni...
Null ppi.RPA1 View Gene Set 0.0001193 24 0.04377 8 Protein-protein-interaction for RPA1 www.ncbi.nlm.ni...
Null ppi.SUMO2 View Gene Set 0.000121 55 0.04377 8 Protein-protein-interaction for SUMO2 www.ncbi.nlm.ni...
Null ppi.DCLRE1C View Gene Set 0.0001372 8 0.04484 11 Protein-protein-interaction for DCLRE1C www.ncbi.nlm.ni...
Null ppi.NDC80 View Gene Set 0.0001797 10 0.04525 12 Protein-protein-interaction for NDC80 www.ncbi.nlm.ni...
Null ppi.PPP1R15A View Gene Set 0.0002118 18 0.04525 12 Protein-protein-interaction for PPP1R15A www.ncbi.nlm.ni...
Null ppi.NIPBL View Gene Set 0.0002139 6 0.04525 12 Protein-protein-interaction for NIPBL www.ncbi.nlm.ni...
Null ppi.HBP1 View Gene Set 0.0002625 11 0.04525 12 Protein-protein-interaction for HBP1 www.ncbi.nlm.ni...
Null ppi.NBN View Gene Set 0.0002389 16 0.04525 12 Protein-protein-interaction for NBN www.ncbi.nlm.ni...
Null ppi.EXOSC5 View Gene Set 0.000266 20 0.04525 12 Protein-protein-interaction for EXOSC5 www.ncbi.nlm.ni...
Null ppi.BRCA2 View Gene Set 0.0002508 6 0.04525 12 Protein-protein-interaction for BRCA2 www.ncbi.nlm.ni...
Null ppi.TAF1 View Gene Set 0.0002569 24 0.04525 12 Protein-protein-interaction for TAF1 www.ncbi.nlm.ni...
Null ppi.TFAP2A View Gene Set 0.0002203 16 0.04525 12 Protein-protein-interaction for TFAP2A www.ncbi.nlm.ni...
Null ppi.TP53 View Gene Set 0.0002893 220 0.04525 12 Protein-protein-interaction for TP53 www.ncbi.nlm.ni...
Null ppi.DDA1 View Gene Set 0.0002733 44 0.04525 12 Protein-protein-interaction for DDA1 www.ncbi.nlm.ni...
Null ppi.ATRIP View Gene Set 0.0002896 13 0.04525 12 Protein-protein-interaction for ATRIP www.ncbi.nlm.ni...

Gene Set Collection: pathwayCommons.cell-map

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null TGFBR View Gene Set 0.001053 124 0.01053 1 CELL_MAP - TGFBR gene set www.pathwaycomm...
Null AndrogenReceptor View Gene Set 0.003283 78 0.01641 2 CELL_MAP - AndrogenReceptor gene set www.pathwaycomm...
Null Wnt View Gene Set 0.00732 81 0.0183 3 CELL_MAP - Wnt gene set www.pathwaycomm...
Null TNF alpha/NF-kB View Gene Set 0.00713 170 0.0183 3 CELL_MAP - TNF alpha/NF-kB gene set www.pathwaycomm...

Gene Set Collection: pathwayCommons.nci-nature

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null BARD1 signaling events View Gene Set 2.118e-05 29 0.00394 1 NCI_NATURE - BARD1 signaling events gene set www.pathwaycomm...
Null Aurora B signaling View Gene Set 0.0002789 41 0.01297 2 NCI_NATURE - Aurora B signaling gene set www.pathwaycomm...
Null Polo-like kinase signaling events in the cell cycle View Gene Set 0.0002566 109 0.01297 2 NCI_NATURE - Polo-like kinase signaling events in the cell cycle gene set www.pathwaycomm...
Null Regulation of Telomerase View Gene Set 0.0002398 68 0.01297 2 NCI_NATURE - Regulation of Telomerase gene set www.pathwaycomm...
Null PLK1 signaling events View Gene Set 0.0004523 104 0.01683 5 NCI_NATURE - PLK1 signaling events gene set www.pathwaycomm...
Null Signaling by Aurora kinases View Gene Set 0.001463 98 0.04536 6 NCI_NATURE - Signaling by Aurora kinases gene set www.pathwaycomm...

Gene Set Collection: pathwayCommons.reactome

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null Cell Cycle Mitotic View Gene Set 3.19e-17 312 3.563e-14 1 REACTOME - Cell Cycle Mitotic gene set www.pathwaycomm... Mitotic&format=...
Null DNA Replication View Gene Set 1.32e-12 200 7.373e-10 2 REACTOME - DNA Replication gene set www.pathwaycomm...
Null Mitotic M-M/G1 phases View Gene Set 1.568e-11 180 5.837e-09 3 REACTOME - Mitotic M-M/G1 phases gene set www.pathwaycomm...
Null Gene Expression View Gene Set 4.328e-11 381 1.208e-08 4 REACTOME - Gene Expression gene set www.pathwaycomm...
Null Processing of Capped Intron-Containing Pre-mRNA View Gene Set 1.077e-09 138 2.004e-07 5 REACTOME - Processing of Capped Intron-Containing Pre-mRNA gene set www.pathwaycomm...
Null Formation and Maturation of mRNA Transcript View Gene Set 9.281e-10 185 2.004e-07 5 REACTOME - Formation and Maturation of mRNA Transcript gene set www.pathwaycomm...
Null mRNA Processing View Gene Set 1.374e-09 158 2.192e-07 7 REACTOME - mRNA Processing gene set www.pathwaycomm...
Null Cell Cycle Checkpoints View Gene Set 1.97e-09 124 2.75e-07 8 REACTOME - Cell Cycle Checkpoints gene set www.pathwaycomm...
Null M Phase View Gene Set 3.005e-09 90 3.73e-07 9 REACTOME - M Phase gene set www.pathwaycomm...
Null G2/M Checkpoints View Gene Set 5.632e-09 43 6.291e-07 10 REACTOME - G2/M Checkpoints gene set www.pathwaycomm...
Null Mitotic Prometaphase View Gene Set 1.092e-08 86 1.109e-06 11 REACTOME - Mitotic Prometaphase gene set www.pathwaycomm...
Null Activation of ATR in response to replication stress View Gene Set 2.721e-08 37 2.533e-06 12 REACTOME - Activation of ATR in response to replication stress gene set www.pathwaycomm...
Null Metabolism of RNA View Gene Set 7.106e-08 174 6.106e-06 13 REACTOME - Metabolism of RNA gene set www.pathwaycomm...
Null mRNA Splicing - Major Pathway View Gene Set 2.223e-07 107 1.656e-05 14 REACTOME - mRNA Splicing - Major Pathway gene set www.pathwaycomm...
Null mRNA Splicing View Gene Set 2.223e-07 107 1.656e-05 14 REACTOME - mRNA Splicing gene set www.pathwaycomm...
Null G2/M DNA damage checkpoint View Gene Set 4.739e-07 29 3.309e-05 16 REACTOME - G2/M DNA damage checkpoint gene set www.pathwaycomm...
Null DNA Repair View Gene Set 1.387e-06 108 9.111e-05 17 REACTOME - DNA Repair gene set www.pathwaycomm...
Null S Phase View Gene Set 3.956e-06 113 0.0002455 18 REACTOME - S Phase gene set www.pathwaycomm...
Null Mitotic G1-G1/S phases View Gene Set 5.586e-06 113 0.0003284 19 REACTOME - Mitotic G1-G1/S phases gene set www.pathwaycomm...
Null G1/S Transition View Gene Set 1.279e-05 104 0.0007142 20 REACTOME - G1/S Transition gene set www.pathwaycomm...
Null HIV Life Cycle View Gene Set 1.485e-05 103 0.0007899 21 REACTOME - HIV Life Cycle gene set www.pathwaycomm...
Null Chromosome Maintenance View Gene Set 1.65e-05 69 0.0008378 22 REACTOME - Chromosome Maintenance gene set www.pathwaycomm...
Null Influenza Life Cycle View Gene Set 1.932e-05 138 0.0009384 23 REACTOME - Influenza Life Cycle gene set www.pathwaycomm...
Null HIV Infection View Gene Set 2.103e-05 194 0.0009789 24 REACTOME - HIV Infection gene set www.pathwaycomm...
Null Influenza Infection View Gene Set 2.823e-05 143 0.001261 25 REACTOME - Influenza Infection gene set www.pathwaycomm...
Null Synthesis of DNA View Gene Set 3.427e-05 102 0.001472 26 REACTOME - Synthesis of DNA gene set www.pathwaycomm...
Null RNA Polymerase II Transcription View Gene Set 3.966e-05 101 0.001641 27 REACTOME - RNA Polymerase II Transcription gene set www.pathwaycomm...
Null Transport of Mature mRNA derived from an Intron-Containing Transcript View Gene Set 5.828e-05 51 0.002325 28 REACTOME - Transport of Mature mRNA derived from an Intron-Containing Transcript gene set www.pathwaycomm...
Null Late Phase of HIV Life Cycle View Gene Set 6.605e-05 92 0.002544 29 REACTOME - Late Phase of HIV Life Cycle gene set www.pathwaycomm...
Null Transport of Mature Transcript to Cytoplasm View Gene Set 8.339e-05 55 0.003105 30 REACTOME - Transport of Mature Transcript to Cytoplasm gene set www.pathwaycomm...
Null Metabolism of mRNA View Gene Set 9.358e-05 125 0.003372 31 REACTOME - Metabolism of mRNA gene set www.pathwaycomm...
Null Deadenylation-dependent mRNA decay View Gene Set 9.8e-05 46 0.003421 32 REACTOME - Deadenylation-dependent mRNA decay gene set www.pathwaycomm...
Null Double-Strand Break Repair View Gene Set 0.0001067 27 0.003505 33 REACTOME - Double-Strand Break Repair gene set www.pathwaycomm...
Null Activation of the pre-replicative complex View Gene Set 0.0001046 30 0.003505 33 REACTOME - Activation of the pre-replicative complex gene set www.pathwaycomm...
Null E2F mediated regulation of DNA replication View Gene Set 0.000117 28 0.003643 35 REACTOME - E2F mediated regulation of DNA replication gene set www.pathwaycomm...
Null snRNP Assembly View Gene Set 0.0001207 50 0.003643 35 REACTOME - snRNP Assembly gene set www.pathwaycomm...
Null Metabolism of non-coding RNA View Gene Set 0.0001207 50 0.003643 35 REACTOME - Metabolism of non-coding RNA gene set www.pathwaycomm...
Null DNA Replication Pre-Initiation View Gene Set 0.0001458 90 0.004176 38 REACTOME - DNA Replication Pre-Initiation gene set www.pathwaycomm...
Null M/G1 Transition View Gene Set 0.0001458 90 0.004176 38 REACTOME - M/G1 Transition gene set www.pathwaycomm...
Null Transcription View Gene Set 0.0001662 178 0.00464 40 REACTOME - Transcription gene set www.pathwaycomm...
Null mRNA Capping View Gene Set 0.0002004 29 0.005459 41 REACTOME - mRNA Capping gene set www.pathwaycomm...
Null G2/M Transition View Gene Set 0.0002497 96 0.00664 42 REACTOME - G2/M Transition gene set www.pathwaycomm...
Null Transport of the SLBP Dependant Mature mRNA View Gene Set 0.0003267 33 0.008305 43 REACTOME - Transport of the SLBP Dependant Mature mRNA gene set www.pathwaycomm...
Null Mitotic G2-G2/M phases View Gene Set 0.0003272 98 0.008305 43 REACTOME - Mitotic G2-G2/M phases gene set www.pathwaycomm...
Null Transport of the SLBP independent Mature mRNA View Gene Set 0.0004608 32 0.01102 45 REACTOME - Transport of the SLBP independent Mature mRNA gene set www.pathwaycomm...
Null Influenza Viral RNA Transcription and Replication View Gene Set 0.0004734 101 0.01102 45 REACTOME - Influenza Viral RNA Transcription and Replication gene set www.pathwaycomm...
Null Metabolism of proteins View Gene Set 0.0004614 263 0.01102 45 REACTOME - Metabolism of proteins gene set www.pathwaycomm...
Null DNA strand elongation View Gene Set 0.0004667 31 0.01102 45 REACTOME - DNA strand elongation gene set www.pathwaycomm...
Null Transport of Mature mRNAs Derived from Intronless Transcripts View Gene Set 0.000705 36 0.01486 49 REACTOME - Transport of Mature mRNAs Derived from Intronless Transcripts gene set www.pathwaycomm...
Null Deposition of New CENPA-containing Nucleosomes at the Centromere View Gene Set 0.0006831 35 0.01486 49 REACTOME - Deposition of New CENPA-containing Nucleosomes at the Centromere gene set www.pathwaycomm...
Null Nucleosome assembly View Gene Set 0.0006831 35 0.01486 49 REACTOME - Nucleosome assembly gene set www.pathwaycomm...
Null GTP hydrolysis and joining of the 60S ribosomal subunit View Gene Set 0.0006809 106 0.01486 49 REACTOME - GTP hydrolysis and joining of the 60S ribosomal subunit gene set www.pathwaycomm...
Null Nucleotide Excision Repair View Gene Set 0.0006936 51 0.01486 49 REACTOME - Nucleotide Excision Repair gene set www.pathwaycomm...
Null Transport of Ribonucleoproteins into the Host Nucleus View Gene Set 0.0008018 29 0.01599 54 REACTOME - Transport of Ribonucleoproteins into the Host Nucleus gene set www.pathwaycomm...
Null 3' -UTR-mediated translational regulation View Gene Set 0.0007927 105 0.01599 54 REACTOME - 3' -UTR-mediated translational regulation gene set www.pathwaycomm...
Null L13a-mediated translational silencing of Ceruloplasmin expression View Gene Set 0.0007927 105 0.01599 54 REACTOME - L13a-mediated translational silencing of Ceruloplasmin expression gene set www.pathwaycomm...
Null RNA Pol II CTD phosphorylation and interaction with CE View Gene Set 0.0008702 27 0.0162 57 REACTOME - RNA Pol II CTD phosphorylation and interaction with CE gene set www.pathwaycomm...
Null RNA Pol II CTD phosphorylation and interaction with CE - 11 View Gene Set 0.0008702 27 0.0162 57 REACTOME - RNA Pol II CTD phosphorylation and interaction with CE - 11 gene set www.pathwaycomm...
Null Cap-dependent Translation Initiation View Gene Set 0.0008439 113 0.0162 57 REACTOME - Cap-dependent Translation Initiation gene set www.pathwaycomm...
Null Eukaryotic Translation Initiation View Gene Set 0.0008439 113 0.0162 57 REACTOME - Eukaryotic Translation Initiation gene set www.pathwaycomm...
Null Translation View Gene Set 0.0009555 120 0.0175 61 REACTOME - Translation gene set www.pathwaycomm...
Null Transport of Mature mRNA Derived from an Intronless Transcript View Gene Set 0.0009847 35 0.01774 62 REACTOME - Transport of Mature mRNA Derived from an Intronless Transcript gene set www.pathwaycomm...
Null Formation of the HIV-1 Early Elongation Complex View Gene Set 0.001089 32 0.01871 63 REACTOME - Formation of the HIV-1 Early Elongation Complex gene set www.pathwaycomm...
Null Formation of the Early Elongation Complex View Gene Set 0.001089 32 0.01871 63 REACTOME - Formation of the Early Elongation Complex gene set www.pathwaycomm...
Null Assembly of the pre-replicative complex View Gene Set 0.001066 75 0.01871 63 REACTOME - Assembly of the pre-replicative complex gene set www.pathwaycomm...
Null Homologous Recombination Repair View Gene Set 0.001242 22 0.02024 66 REACTOME - Homologous Recombination Repair gene set www.pathwaycomm...
Null Homologous recombination repair of replication-independent double-strand breaks View Gene Set 0.001242 22 0.02024 66 REACTOME - Homologous recombination repair of replication-independent double-strand breaks gene set www.pathwaycomm...
Null Regulation of mitotic cell cycle View Gene Set 0.001268 95 0.02024 66 REACTOME - Regulation of mitotic cell cycle gene set www.pathwaycomm...
Null APC/C-mediated degradation of cell cycle proteins View Gene Set 0.001268 95 0.02024 66 REACTOME - APC/C-mediated degradation of cell cycle proteins gene set www.pathwaycomm...
Null Removal of licensing factors from origins View Gene Set 0.001263 78 0.02024 66 REACTOME - Removal of licensing factors from origins gene set www.pathwaycomm...
Null Transcription-coupled NER (TC-NER) View Gene Set 0.001301 45 0.02047 71 REACTOME - Transcription-coupled NER (TC-NER) gene set www.pathwaycomm...
Null Activation of APC/C and APC/C:Cdc20 mediated degradation of mitotic proteins View Gene Set 0.001342 86 0.02082 72 REACTOME - Activation of APC/C and APC/C:Cdc20 mediated degradation of mitotic proteins gene set www.pathwaycomm...
Null Regulation of APC/C activators between G1/S and early anaphase View Gene Set 0.00139 88 0.02126 73 REACTOME - Regulation of APC/C activators between G1/S and early anaphase gene set www.pathwaycomm...
Null Transcription of the HIV genome View Gene Set 0.001428 60 0.02156 74 REACTOME - Transcription of the HIV genome gene set www.pathwaycomm...
Null Post-Elongation Processing of the Transcript View Gene Set 0.001564 43 0.0224 75 REACTOME - Post-Elongation Processing of the Transcript gene set www.pathwaycomm...
Null Vpr-mediated nuclear import of PICs View Gene Set 0.001556 31 0.0224 75 REACTOME - Vpr-mediated nuclear import of PICs gene set www.pathwaycomm...
Null Cleavage of Growing Transcript in the Termination Region View Gene Set 0.001564 43 0.0224 75 REACTOME - Cleavage of Growing Transcript in the Termination Region gene set www.pathwaycomm...
Null RNA Polymerase II Transcription Termination View Gene Set 0.001564 43 0.0224 75 REACTOME - RNA Polymerase II Transcription Termination gene set www.pathwaycomm...
Null CDT1 association with the CDC6:ORC:origin complex View Gene Set 0.001783 66 0.02459 79 REACTOME - CDT1 association with the CDC6:ORC:origin complex gene set www.pathwaycomm...
Null E2F-enabled inhibition of pre-replication complex formation View Gene Set 0.001775 10 0.02459 79 REACTOME - E2F-enabled inhibition of pre-replication complex formation gene set www.pathwaycomm...
Null Regulation of DNA replication View Gene Set 0.00175 81 0.02459 79 REACTOME - Regulation of DNA replication gene set www.pathwaycomm...
Null Switching of origins to a post-replicative state View Gene Set 0.001909 76 0.02569 82 REACTOME - Switching of origins to a post-replicative state gene set www.pathwaycomm...
Null Orc1 removal from chromatin View Gene Set 0.001909 76 0.02569 82 REACTOME - Orc1 removal from chromatin gene set www.pathwaycomm...
Null Assembly of the ORC complex at the origin of replication View Gene Set 0.001935 6 0.02573 84 REACTOME - Assembly of the ORC complex at the origin of replication gene set www.pathwaycomm...
Null Recruitment of mitotic centrosome proteins and complexes View Gene Set 0.002109 72 0.02771 85 REACTOME - Recruitment of mitotic centrosome proteins and complexes gene set www.pathwaycomm...
Null Global Genomic NER (GG-NER) View Gene Set 0.002219 35 0.02882 86 REACTOME - Global Genomic NER (GG-NER) gene set www.pathwaycomm...
Null Lagging Strand Synthesis View Gene Set 0.00228 20 0.02928 87 REACTOME - Lagging Strand Synthesis gene set www.pathwaycomm...
Null Post-Elongation Processing of Intron-Containing pre-mRNA View Gene Set 0.002581 34 0.02998 88 REACTOME - Post-Elongation Processing of Intron-Containing pre-mRNA gene set www.pathwaycomm...
Null mRNA 3'-end processing View Gene Set 0.002581 34 0.02998 88 REACTOME - mRNA 3'-end processing gene set www.pathwaycomm...
Null HIV-1 Transcription Initiation View Gene Set 0.00263 40 0.02998 88 REACTOME - HIV-1 Transcription Initiation gene set www.pathwaycomm...
Null RNA Polymerase II HIV-1 Promoter Escape View Gene Set 0.00263 40 0.02998 88 REACTOME - RNA Polymerase II HIV-1 Promoter Escape gene set www.pathwaycomm...
Null RNA Polymerase II Promoter Escape View Gene Set 0.00263 40 0.02998 88 REACTOME - RNA Polymerase II Promoter Escape gene set www.pathwaycomm...
Null RNA Polymerase II Transcription Initiation And Promoter Clearance View Gene Set 0.00263 40 0.02998 88 REACTOME - RNA Polymerase II Transcription Initiation And Promoter Clearance gene set www.pathwaycomm...
Null RNA Polymerase II Transcription Initiation View Gene Set 0.00263 40 0.02998 88 REACTOME - RNA Polymerase II Transcription Initiation gene set www.pathwaycomm...
Null RNA Polymerase II Transcription Pre-Initiation And Promoter Opening View Gene Set 0.00263 40 0.02998 88 REACTOME - RNA Polymerase II Transcription Pre-Initiation And Promoter Opening gene set www.pathwaycomm...
Null Cdc20:Phospho-APC/C mediated degradation of Cyclin A View Gene Set 0.002582 75 0.02998 88 REACTOME - Cdc20:Phospho-APC/C mediated degradation of Cyclin A gene set www.pathwaycomm...
Null NEP/NS2 Interacts with the Cellular Export Machinery View Gene Set 0.002536 29 0.02998 88 REACTOME - NEP/NS2 Interacts with the Cellular Export Machinery gene set www.pathwaycomm...
Null Export of Viral Ribonucleoproteins from Nucleus View Gene Set 0.00251 31 0.02998 88 REACTOME - Export of Viral Ribonucleoproteins from Nucleus gene set www.pathwaycomm...
Null Centrosome maturation View Gene Set 0.002924 73 0.033 99 REACTOME - Centrosome maturation gene set www.pathwaycomm...
Null Insulin Synthesis and Processing View Gene Set 0.003241 132 0.0362 100 REACTOME - Insulin Synthesis and Processing gene set www.pathwaycomm...
Null Telomere C-strand (Lagging Strand) Synthesis View Gene Set 0.003445 22 0.0381 101 REACTOME - Telomere C-strand (Lagging Strand) Synthesis gene set www.pathwaycomm...
Null Telomere Maintenance View Gene Set 0.003551 49 0.03889 102 REACTOME - Telomere Maintenance gene set www.pathwaycomm...
Null APC/C:Cdc20 mediated degradation of mitotic proteins View Gene Set 0.003605 77 0.0391 103 REACTOME - APC/C:Cdc20 mediated degradation of mitotic proteins gene set www.pathwaycomm...
Null Translation initiation complex formation View Gene Set 0.003698 56 0.03971 104 REACTOME - Translation initiation complex formation gene set www.pathwaycomm...
Null Nuclear import of Rev protein View Gene Set 0.003809 30 0.04052 105 REACTOME - Nuclear import of Rev protein gene set www.pathwaycomm...
Null Interactions of Rev with host cellular proteins View Gene Set 0.004098 33 0.04278 106 REACTOME - Interactions of Rev with host cellular proteins gene set www.pathwaycomm...
Null Activation of the mRNA upon binding of the cap-binding complex and eIFs and subsequent binding to 43S View Gene Set 0.004086 57 0.04278 106 REACTOME - Activation of the mRNA upon binding of the cap-binding complex and eIFs and subsequent binding to 43S gene set www.pathwaycomm... and subsequent ...
Null Formation of a pool of free 40S subunits View Gene Set 0.004203 95 0.04308 108 REACTOME - Formation of a pool of free 40S subunits gene set www.pathwaycomm...
Null Deadenylation of mRNA View Gene Set 0.004184 22 0.04308 108 REACTOME - Deadenylation of mRNA gene set www.pathwaycomm...
Null RNA Polymerase II Pre-transcription Events View Gene Set 0.004452 58 0.04462 110 REACTOME - RNA Polymerase II Pre-transcription Events gene set www.pathwaycomm...
Null Homologous DNA pairing and strand exchange View Gene Set 0.004543 7 0.04462 110 REACTOME - Homologous DNA pairing and strand exchange gene set www.pathwaycomm...
Null CDC6 association with the ORC:origin complex View Gene Set 0.004433 11 0.04462 110 REACTOME - CDC6 association with the ORC:origin complex gene set www.pathwaycomm...
Null G1/S-Specific Transcription View Gene Set 0.004554 16 0.04462 110 REACTOME - G1/S-Specific Transcription gene set www.pathwaycomm...
Null Synthesis Secretion and Inactivation of Glucose-dependent Insulinotropic Polypeptide (GIP) View Gene Set 0.004496 107 0.04462 110 REACTOME - Synthesis Secretion and Inactivation of Glucose-dependent Insulinotropic Polypeptide (GIP) gene set www.pathwaycomm... Secretion... and Inactivatio...
Null mRNA Splicing - Minor Pathway View Gene Set 0.004705 42 0.0457 115 REACTOME - mRNA Splicing - Minor Pathway gene set www.pathwaycomm...
Null Apoptotic execution phase View Gene Set 0.005018 49 0.04832 116 REACTOME - Apoptotic execution phase gene set www.pathwaycomm...

Gene Set Collection: miranda.targets

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null hsa-miR-590-3p View Gene Set 1.412e-127 3575 9.561e-125 1 microRNA targets for hsa-miR-590-3p from miranda.targets www.mirbase.org...
Null hsa-miR-548n View Gene Set 1.544e-112 3830 5.226e-110 2 microRNA targets for hsa-miR-548n from miranda.targets www.mirbase.org...
Null hsa-miR-561 View Gene Set 2.056e-97 2925 4.639e-95 3 microRNA targets for hsa-miR-561 from miranda.targets www.mirbase.org...
Null hsa-miR-548a-5p View Gene Set 2.422e-95 2983 4.1e-93 4 microRNA targets for hsa-miR-548a-5p from miranda.targets www.mirbase.org...
Null hsa-miR-548b-5p View Gene Set 5.446e-93 3175 7.374e-91 5 microRNA targets for hsa-miR-548b-5p from miranda.targets www.mirbase.org...
Null hsa-miR-548d-5p View Gene Set 4.408e-89 3270 4.973e-87 6 microRNA targets for hsa-miR-548d-5p from miranda.targets www.mirbase.org...
Null hsa-miR-548l View Gene Set 7.593e-88 2599 7.343e-86 7 microRNA targets for hsa-miR-548l from miranda.targets www.mirbase.org...
Null hsa-miR-548i View Gene Set 3.43e-87 2860 2.903e-85 8 microRNA targets for hsa-miR-548i from miranda.targets www.mirbase.org...
Null hsa-miR-548c-3p View Gene Set 1.088e-84 3130 8.185e-83 9 microRNA targets for hsa-miR-548c-3p from miranda.targets www.mirbase.org...
Null hsa-miR-548c-5p View Gene Set 8.016e-84 2909 5.427e-82 10 microRNA targets for hsa-miR-548c-5p from miranda.targets www.mirbase.org...
Null hsa-miR-548h View Gene Set 3.929e-83 2539 2.418e-81 11 microRNA targets for hsa-miR-548h from miranda.targets www.mirbase.org...
Null hsa-miR-559 View Gene Set 6.033e-83 2900 3.404e-81 12 microRNA targets for hsa-miR-559 from miranda.targets www.mirbase.org...
Null hsa-miR-548j View Gene Set 1.247e-81 2652 6.493e-80 13 microRNA targets for hsa-miR-548j from miranda.targets www.mirbase.org...
Null hsa-miR-944 View Gene Set 1.297e-80 2438 6.273e-79 14 microRNA targets for hsa-miR-944 from miranda.targets www.mirbase.org...
Null hsa-miR-513a-3p View Gene Set 3.373e-75 2711 1.522e-73 15 microRNA targets for hsa-miR-513a-3p from miranda.targets www.mirbase.org...
Null hsa-miR-548a-3p View Gene Set 1.682e-68 2420 7.116e-67 16 microRNA targets for hsa-miR-548a-3p from miranda.targets www.mirbase.org...
Null hsa-miR-142-5p View Gene Set 1.547e-67 2312 6.162e-66 17 microRNA targets for hsa-miR-142-5p from miranda.targets www.mirbase.org...
Null hsa-miR-577 View Gene Set 5.249e-67 2745 1.974e-65 18 microRNA targets for hsa-miR-577 from miranda.targets www.mirbase.org...
Null hsa-miR-607 View Gene Set 2.738e-66 2322 9.757e-65 19 microRNA targets for hsa-miR-607 from miranda.targets www.mirbase.org...
Null hsa-miR-186 View Gene Set 1.371e-65 2681 4.641e-64 20 microRNA targets for hsa-miR-186 from miranda.targets www.mirbase.org...
Null hsa-miR-548e View Gene Set 2.702e-65 2325 8.711e-64 21 microRNA targets for hsa-miR-548e from miranda.targets www.mirbase.org...
Null hsa-miR-548o View Gene Set 4.212e-63 2216 1.296e-61 22 microRNA targets for hsa-miR-548o from miranda.targets www.mirbase.org...
Null hsa-miR-374a View Gene Set 5.21e-63 1933 1.534e-61 23 microRNA targets for hsa-miR-374a from miranda.targets www.mirbase.org...
Null hsa-miR-586 View Gene Set 8.845e-63 2421 2.495e-61 24 microRNA targets for hsa-miR-586 from miranda.targets www.mirbase.org...
Null hsa-miR-340 View Gene Set 2.934e-62 2504 7.794e-61 25 microRNA targets for hsa-miR-340 from miranda.targets www.mirbase.org...
Null hsa-miR-548f View Gene Set 2.993e-62 2082 7.794e-61 25 microRNA targets for hsa-miR-548f from miranda.targets www.mirbase.org...
Null hsa-miR-570 View Gene Set 9.471e-61 3124 2.375e-59 27 microRNA targets for hsa-miR-570 from miranda.targets www.mirbase.org...
Null hsa-miR-568 View Gene Set 1.25e-60 2065 3.022e-59 28 microRNA targets for hsa-miR-568 from miranda.targets www.mirbase.org...
Null hsa-miR-548m View Gene Set 1.154e-59 2295 2.694e-58 29 microRNA targets for hsa-miR-548m from miranda.targets www.mirbase.org...
Null hsa-miR-656 View Gene Set 6.512e-58 1774 1.469e-56 30 microRNA targets for hsa-miR-656 from miranda.targets www.mirbase.org...
Null hsa-miR-548p View Gene Set 1.347e-57 2743 2.943e-56 31 microRNA targets for hsa-miR-548p from miranda.targets www.mirbase.org...
Null hsa-miR-429 View Gene Set 4.407e-57 1921 9.324e-56 32 microRNA targets for hsa-miR-429 from miranda.targets www.mirbase.org...
Null hsa-miR-374b View Gene Set 5.062e-57 1802 1.038e-55 33 microRNA targets for hsa-miR-374b from miranda.targets www.mirbase.org...
Null hsa-miR-301b View Gene Set 1.221e-56 2090 2.432e-55 34 microRNA targets for hsa-miR-301b from miranda.targets www.mirbase.org...
Null hsa-miR-1323 View Gene Set 1.181e-54 2071 2.285e-53 35 microRNA targets for hsa-miR-1323 from miranda.targets www.mirbase.org...
Null hsa-miR-548g View Gene Set 6.315e-54 2114 1.188e-52 36 microRNA targets for hsa-miR-548g from miranda.targets www.mirbase.org...
Null hsa-miR-655 View Gene Set 1.574e-53 1858 2.88e-52 37 microRNA targets for hsa-miR-655 from miranda.targets www.mirbase.org...
Null hsa-miR-200b View Gene Set 8.656e-53 1789 1.542e-51 38 microRNA targets for hsa-miR-200b from miranda.targets www.mirbase.org...
Null hsa-miR-548d-3p View Gene Set 1.401e-52 2210 2.433e-51 39 microRNA targets for hsa-miR-548d-3p from miranda.targets www.mirbase.org...
Null hsa-miR-301a View Gene Set 1.718e-52 2114 2.908e-51 40 microRNA targets for hsa-miR-301a from miranda.targets www.mirbase.org...
Null hsa-miR-450b-5p View Gene Set 2.932e-52 2243 4.841e-51 41 microRNA targets for hsa-miR-450b-5p from miranda.targets www.mirbase.org...
Null hsa-miR-380 View Gene Set 5.164e-52 1449 8.324e-51 42 microRNA targets for hsa-miR-380 from miranda.targets www.mirbase.org...
Null hsa-miR-26b View Gene Set 2.137e-51 1511 3.293e-50 43 microRNA targets for hsa-miR-26b from miranda.targets www.mirbase.org...
Null hsa-miR-582-5p View Gene Set 2.14e-51 1971 3.293e-50 43 microRNA targets for hsa-miR-582-5p from miranda.targets www.mirbase.org...
Null hsa-miR-1283 View Gene Set 3.223e-51 1960 4.848e-50 45 microRNA targets for hsa-miR-1283 from miranda.targets www.mirbase.org...
Null hsa-miR-802 View Gene Set 3.707e-51 1859 5.456e-50 46 microRNA targets for hsa-miR-802 from miranda.targets www.mirbase.org...
Null hsa-miR-524-5p View Gene Set 4.195e-51 2574 6.042e-50 47 microRNA targets for hsa-miR-524-5p from miranda.targets www.mirbase.org...
Null hsa-miR-548k View Gene Set 3.792e-50 1874 5.349e-49 48 microRNA targets for hsa-miR-548k from miranda.targets www.mirbase.org...
Null hsa-miR-1244 View Gene Set 1.769e-49 2675 2.444e-48 49 microRNA targets for hsa-miR-1244 from miranda.targets www.mirbase.org...
Null hsa-miR-200c View Gene Set 3.824e-49 1794 5.178e-48 50 microRNA targets for hsa-miR-200c from miranda.targets www.mirbase.org...
Null hsa-miR-203 View Gene Set 4.281e-49 2295 5.682e-48 51 microRNA targets for hsa-miR-203 from miranda.targets www.mirbase.org...
Null hsa-miR-144 View Gene Set 8.098e-49 1767 1.054e-47 52 microRNA targets for hsa-miR-144 from miranda.targets www.mirbase.org...
Null hsa-miR-633 View Gene Set 1.382e-47 1452 1.765e-46 53 microRNA targets for hsa-miR-633 from miranda.targets www.mirbase.org...
Null hsa-miR-641 View Gene Set 3.092e-47 2384 3.877e-46 54 microRNA targets for hsa-miR-641 from miranda.targets www.mirbase.org...
Null hsa-miR-338-5p View Gene Set 7.806e-47 1707 9.608e-46 55 microRNA targets for hsa-miR-338-5p from miranda.targets www.mirbase.org...
Null hsa-miR-1259 View Gene Set 5.326e-46 1309 6.439e-45 56 microRNA targets for hsa-miR-1259 from miranda.targets www.mirbase.org...
Null hsa-miR-580 View Gene Set 6.482e-45 2207 7.699e-44 57 microRNA targets for hsa-miR-580 from miranda.targets www.mirbase.org...
Null hsa-miR-494 View Gene Set 2.091e-44 1886 2.441e-43 58 microRNA targets for hsa-miR-494 from miranda.targets www.mirbase.org...
Null hsa-miR-454 View Gene Set 2.883e-44 1949 3.308e-43 59 microRNA targets for hsa-miR-454 from miranda.targets www.mirbase.org...
Null hsa-miR-26a View Gene Set 9.204e-43 1414 1.039e-41 60 microRNA targets for hsa-miR-26a from miranda.targets www.mirbase.org...
Null hsa-miR-181d View Gene Set 1.631e-42 2212 1.81e-41 61 microRNA targets for hsa-miR-181d from miranda.targets www.mirbase.org...
Null hsa-miR-19a View Gene Set 1.449e-41 2189 1.582e-40 62 microRNA targets for hsa-miR-19a from miranda.targets www.mirbase.org...
Null hsa-miR-579 View Gene Set 5.601e-41 1840 6.018e-40 63 microRNA targets for hsa-miR-579 from miranda.targets www.mirbase.org...
Null hsa-miR-190 View Gene Set 6.467e-41 1773 6.84e-40 64 microRNA targets for hsa-miR-190 from miranda.targets www.mirbase.org...
Null hsa-miR-664 View Gene Set 7.371e-41 2111 7.677e-40 65 microRNA targets for hsa-miR-664 from miranda.targets www.mirbase.org...
Null hsa-miR-545 View Gene Set 7.746e-41 2246 7.946e-40 66 microRNA targets for hsa-miR-545 from miranda.targets www.mirbase.org...
Null hsa-miR-1305 View Gene Set 8.526e-41 1619 8.615e-40 67 microRNA targets for hsa-miR-1305 from miranda.targets www.mirbase.org...
Null hsa-miR-369-3p View Gene Set 1.259e-40 1454 1.253e-39 68 microRNA targets for hsa-miR-369-3p from miranda.targets www.mirbase.org...
Null hsa-miR-495 View Gene Set 1.601e-40 1793 1.571e-39 69 microRNA targets for hsa-miR-495 from miranda.targets www.mirbase.org...
Null hsa-miR-452 View Gene Set 4.699e-40 1919 4.545e-39 70 microRNA targets for hsa-miR-452 from miranda.targets www.mirbase.org...
Null hsa-miR-20a View Gene Set 1.796e-39 2324 1.712e-38 71 microRNA targets for hsa-miR-20a from miranda.targets www.mirbase.org...
Null hsa-miR-520d-5p View Gene Set 6.17e-39 2061 5.801e-38 72 microRNA targets for hsa-miR-520d-5p from miranda.targets www.mirbase.org...
Null hsa-miR-130a View Gene Set 9.106e-39 1687 8.445e-38 73 microRNA targets for hsa-miR-130a from miranda.targets www.mirbase.org...
Null hsa-miR-1264 View Gene Set 4.624e-38 2008 4.23e-37 74 microRNA targets for hsa-miR-1264 from miranda.targets www.mirbase.org...
Null hsa-miR-576-5p View Gene Set 1.082e-37 1494 9.764e-37 75 microRNA targets for hsa-miR-576-5p from miranda.targets www.mirbase.org...
Null hsa-miR-519c-3p View Gene Set 1.383e-37 2011 1.232e-36 76 microRNA targets for hsa-miR-519c-3p from miranda.targets www.mirbase.org...
Null hsa-miR-30e View Gene Set 7.026e-37 1792 6.178e-36 77 microRNA targets for hsa-miR-30e from miranda.targets www.mirbase.org...
Null hsa-miR-606 View Gene Set 7.692e-37 1040 6.676e-36 78 microRNA targets for hsa-miR-606 from miranda.targets www.mirbase.org...
Null hsa-miR-1252 View Gene Set 1.053e-36 3125 9.023e-36 79 microRNA targets for hsa-miR-1252 from miranda.targets www.mirbase.org...
Null hsa-miR-768-3p View Gene Set 1.355e-36 2025 1.147e-35 80 microRNA targets for hsa-miR-768-3p from miranda.targets www.mirbase.org...
Null hsa-miR-181c View Gene Set 2.593e-36 1844 2.141e-35 81 microRNA targets for hsa-miR-181c from miranda.targets www.mirbase.org...
Null hsa-miR-19b View Gene Set 2.562e-36 2017 2.141e-35 81 microRNA targets for hsa-miR-19b from miranda.targets www.mirbase.org...
Null hsa-miR-519a View Gene Set 3.191e-36 1837 2.603e-35 83 microRNA targets for hsa-miR-519a from miranda.targets www.mirbase.org...
Null hsa-miR-448 View Gene Set 1.178e-35 1660 9.492e-35 84 microRNA targets for hsa-miR-448 from miranda.targets www.mirbase.org...
Null hsa-miR-410 View Gene Set 1.33e-35 1101 1.06e-34 85 microRNA targets for hsa-miR-410 from miranda.targets www.mirbase.org...
Null hsa-miR-106a View Gene Set 4.737e-35 2173 3.686e-34 86 microRNA targets for hsa-miR-106a from miranda.targets www.mirbase.org...
Null hsa-miR-17 View Gene Set 4.737e-35 2173 3.686e-34 86 microRNA targets for hsa-miR-17 from miranda.targets www.mirbase.org...
Null hsa-miR-520g View Gene Set 6.185e-35 2140 4.758e-34 88 microRNA targets for hsa-miR-520g from miranda.targets www.mirbase.org...
Null hsa-miR-539 View Gene Set 1.248e-34 2308 9.492e-34 89 microRNA targets for hsa-miR-539 from miranda.targets www.mirbase.org...
Null hsa-miR-141 View Gene Set 4.522e-34 1773 3.401e-33 90 microRNA targets for hsa-miR-141 from miranda.targets www.mirbase.org...
Null hsa-miR-573 View Gene Set 5.99e-34 2023 4.457e-33 91 microRNA targets for hsa-miR-573 from miranda.targets www.mirbase.org...
Null hsa-miR-889 View Gene Set 9.283e-34 873 6.831e-33 92 microRNA targets for hsa-miR-889 from miranda.targets www.mirbase.org...
Null hsa-miR-496 View Gene Set 1.247e-33 1044 9.076e-33 93 microRNA targets for hsa-miR-496 from miranda.targets www.mirbase.org...
Null hsa-miR-181b View Gene Set 1.345e-33 2118 9.687e-33 94 microRNA targets for hsa-miR-181b from miranda.targets www.mirbase.org...
Null hsa-miR-302b View Gene Set 2.069e-33 2091 1.475e-32 95 microRNA targets for hsa-miR-302b from miranda.targets www.mirbase.org...
Null hsa-miR-105 View Gene Set 3.571e-33 1644 2.519e-32 96 microRNA targets for hsa-miR-105 from miranda.targets www.mirbase.org...
Null hsa-miR-491-3p View Gene Set 8.917e-33 1136 6.224e-32 97 microRNA targets for hsa-miR-491-3p from miranda.targets www.mirbase.org...
Null hsa-miR-181a View Gene Set 1.193e-32 1946 8.245e-32 98 microRNA targets for hsa-miR-181a from miranda.targets www.mirbase.org...
Null hsa-miR-522 View Gene Set 1.464e-32 1877 1.001e-31 99 microRNA targets for hsa-miR-522 from miranda.targets www.mirbase.org...
Null hsa-miR-544 View Gene Set 3.026e-32 2072 2.049e-31 100 microRNA targets for hsa-miR-544 from miranda.targets www.mirbase.org...
Null hsa-miR-20b View Gene Set 3.279e-32 2122 2.198e-31 101 microRNA targets for hsa-miR-20b from miranda.targets www.mirbase.org...
Null hsa-miR-1297 View Gene Set 7.368e-32 1019 4.843e-31 102 microRNA targets for hsa-miR-1297 from miranda.targets www.mirbase.org...
Null hsa-miR-30a View Gene Set 7.334e-32 1611 4.843e-31 102 microRNA targets for hsa-miR-30a from miranda.targets www.mirbase.org...
Null hsa-miR-30c View Gene Set 1.228e-31 1792 7.996e-31 104 microRNA targets for hsa-miR-30c from miranda.targets www.mirbase.org...
Null hsa-miR-409-3p View Gene Set 1.378e-31 1282 8.882e-31 105 microRNA targets for hsa-miR-409-3p from miranda.targets www.mirbase.org...
Null hsa-miR-381 View Gene Set 1.464e-31 1638 9.35e-31 106 microRNA targets for hsa-miR-381 from miranda.targets www.mirbase.org...
Null hsa-miR-421 View Gene Set 2.072e-31 1629 1.311e-30 107 microRNA targets for hsa-miR-421 from miranda.targets www.mirbase.org...
Null hsa-miR-101 View Gene Set 2.405e-31 1272 1.507e-30 108 microRNA targets for hsa-miR-101 from miranda.targets www.mirbase.org...
Null hsa-miR-223 View Gene Set 3.093e-31 1344 1.921e-30 109 microRNA targets for hsa-miR-223 from miranda.targets www.mirbase.org...
Null hsa-miR-888 View Gene Set 3.982e-31 1379 2.451e-30 110 microRNA targets for hsa-miR-888 from miranda.targets www.mirbase.org...
Null hsa-miR-1 View Gene Set 4.046e-31 1772 2.468e-30 111 microRNA targets for hsa-miR-1 from miranda.targets www.mirbase.org...
Null hsa-miR-23b View Gene Set 7.549e-31 1858 4.563e-30 112 microRNA targets for hsa-miR-23b from miranda.targets www.mirbase.org...
Null hsa-miR-519b-3p View Gene Set 8.726e-31 1786 5.228e-30 113 microRNA targets for hsa-miR-519b-3p from miranda.targets www.mirbase.org...
Null hsa-miR-1284 View Gene Set 1.215e-30 1108 7.217e-30 114 microRNA targets for hsa-miR-1284 from miranda.targets www.mirbase.org...
Null hsa-miR-1206 View Gene Set 1.435e-30 1455 8.449e-30 115 microRNA targets for hsa-miR-1206 from miranda.targets www.mirbase.org...
Null hsa-miR-130b View Gene Set 1.726e-30 1682 1.007e-29 116 microRNA targets for hsa-miR-130b from miranda.targets www.mirbase.org...
Null hsa-miR-137 View Gene Set 3.051e-30 1442 1.765e-29 117 microRNA targets for hsa-miR-137 from miranda.targets www.mirbase.org...
Null hsa-miR-155 View Gene Set 4.013e-30 1331 2.303e-29 118 microRNA targets for hsa-miR-155 from miranda.targets www.mirbase.org...
Null hsa-miR-543 View Gene Set 1.005e-29 1457 5.718e-29 119 microRNA targets for hsa-miR-543 from miranda.targets www.mirbase.org...
Null hsa-miR-590-5p View Gene Set 1.165e-29 1206 6.573e-29 120 microRNA targets for hsa-miR-590-5p from miranda.targets www.mirbase.org...
Null hsa-miR-30d View Gene Set 1.403e-29 1500 7.849e-29 121 microRNA targets for hsa-miR-30d from miranda.targets www.mirbase.org...
Null hsa-miR-302d View Gene Set 2.194e-29 2056 1.217e-28 122 microRNA targets for hsa-miR-302d from miranda.targets www.mirbase.org...
Null hsa-miR-23a View Gene Set 4.85e-29 1861 2.669e-28 123 microRNA targets for hsa-miR-23a from miranda.targets www.mirbase.org...
Null hsa-miR-624 View Gene Set 9.313e-29 1486 5.085e-28 124 microRNA targets for hsa-miR-624 from miranda.targets www.mirbase.org...
Null hsa-miR-300 View Gene Set 2.592e-28 1644 1.404e-27 125 microRNA targets for hsa-miR-300 from miranda.targets www.mirbase.org...
Null hsa-miR-361-5p View Gene Set 4.162e-28 1236 2.236e-27 126 microRNA targets for hsa-miR-361-5p from miranda.targets www.mirbase.org...
Null hsa-miR-30b View Gene Set 5.132e-28 1695 2.735e-27 127 microRNA targets for hsa-miR-30b from miranda.targets www.mirbase.org...
Null hsa-miR-376c View Gene Set 1.339e-27 1429 7.084e-27 128 microRNA targets for hsa-miR-376c from miranda.targets www.mirbase.org...
Null hsa-miR-499-5p View Gene Set 1.396e-27 1309 7.328e-27 129 microRNA targets for hsa-miR-499-5p from miranda.targets www.mirbase.org...
Null hsa-miR-513b View Gene Set 6.914e-27 1603 3.601e-26 130 microRNA targets for hsa-miR-513b from miranda.targets www.mirbase.org...
Null hsa-miR-302c View Gene Set 1.858e-26 2046 9.604e-26 131 microRNA targets for hsa-miR-302c from miranda.targets www.mirbase.org...
Null hsa-miR-582-3p View Gene Set 2.811e-26 1217 1.442e-25 132 microRNA targets for hsa-miR-582-3p from miranda.targets www.mirbase.org...
Null hsa-miR-129-5p View Gene Set 3.029e-26 1724 1.542e-25 133 microRNA targets for hsa-miR-129-5p from miranda.targets www.mirbase.org...
Null hsa-miR-373 View Gene Set 3.349e-26 2061 1.691e-25 134 microRNA targets for hsa-miR-373 from miranda.targets www.mirbase.org...
Null hsa-miR-382 View Gene Set 3.371e-26 1641 1.691e-25 134 microRNA targets for hsa-miR-382 from miranda.targets www.mirbase.org...
Null hsa-miR-587 View Gene Set 3.561e-26 1524 1.772e-25 136 microRNA targets for hsa-miR-587 from miranda.targets www.mirbase.org...
Null hsa-miR-219-2-3p View Gene Set 5.453e-26 1131 2.695e-25 137 microRNA targets for hsa-miR-219-2-3p from miranda.targets www.mirbase.org...
Null hsa-miR-1278 View Gene Set 6.368e-26 1219 3.124e-25 138 microRNA targets for hsa-miR-1278 from miranda.targets www.mirbase.org...
Null hsa-miR-200a View Gene Set 6.524e-26 1619 3.155e-25 139 microRNA targets for hsa-miR-200a from miranda.targets www.mirbase.org...
Null hsa-miR-302a View Gene Set 6.51e-26 2054 3.155e-25 139 microRNA targets for hsa-miR-302a from miranda.targets www.mirbase.org...
Null hsa-miR-21 View Gene Set 7.773e-26 1053 3.732e-25 141 microRNA targets for hsa-miR-21 from miranda.targets www.mirbase.org...
Null hsa-miR-93 View Gene Set 8.897e-26 2077 4.242e-25 142 microRNA targets for hsa-miR-93 from miranda.targets www.mirbase.org...
Null hsa-miR-653 View Gene Set 1.185e-25 1411 5.612e-25 143 microRNA targets for hsa-miR-653 from miranda.targets www.mirbase.org...
Null hsa-miR-106b View Gene Set 1.221e-25 1804 5.738e-25 144 microRNA targets for hsa-miR-106b from miranda.targets www.mirbase.org...
Null hsa-miR-1272 View Gene Set 1.416e-25 1955 6.612e-25 145 microRNA targets for hsa-miR-1272 from miranda.targets www.mirbase.org...
Null hsa-miR-367 View Gene Set 2.393e-25 1270 1.11e-24 146 microRNA targets for hsa-miR-367 from miranda.targets www.mirbase.org...
Null hsa-miR-190b View Gene Set 3.469e-25 1281 1.598e-24 147 microRNA targets for hsa-miR-190b from miranda.targets www.mirbase.org...
Null hsa-miR-520h View Gene Set 3.645e-25 1820 1.667e-24 148 microRNA targets for hsa-miR-520h from miranda.targets www.mirbase.org...
Null hsa-miR-335 View Gene Set 5.896e-25 1631 2.679e-24 149 microRNA targets for hsa-miR-335 from miranda.targets www.mirbase.org...
Null hsa-miR-569 View Gene Set 1.267e-24 1013 5.716e-24 150 microRNA targets for hsa-miR-569 from miranda.targets www.mirbase.org...
Null hsa-miR-643 View Gene Set 1.387e-24 989 6.22e-24 151 microRNA targets for hsa-miR-643 from miranda.targets www.mirbase.org...
Null hsa-miR-372 View Gene Set 1.942e-24 1832 8.649e-24 152 microRNA targets for hsa-miR-372 from miranda.targets www.mirbase.org...
Null hsa-miR-628-3p View Gene Set 2.375e-24 932 1.051e-23 153 microRNA targets for hsa-miR-628-3p from miranda.targets www.mirbase.org...
Null hsa-miR-567 View Gene Set 2.456e-24 1183 1.08e-23 154 microRNA targets for hsa-miR-567 from miranda.targets www.mirbase.org...
Null hsa-miR-34b View Gene Set 2.54e-24 1180 1.109e-23 155 microRNA targets for hsa-miR-34b from miranda.targets www.mirbase.org...
Null hsa-miR-651 View Gene Set 4.351e-24 1234 1.888e-23 156 microRNA targets for hsa-miR-651 from miranda.targets www.mirbase.org...
Null hsa-miR-1826 View Gene Set 5.082e-24 1313 2.191e-23 157 microRNA targets for hsa-miR-1826 from miranda.targets www.mirbase.org...
Null hsa-miR-1290 View Gene Set 5.898e-24 1539 2.527e-23 158 microRNA targets for hsa-miR-1290 from miranda.targets www.mirbase.org...
Null hsa-miR-217 View Gene Set 8.22e-24 1316 3.5e-23 159 microRNA targets for hsa-miR-217 from miranda.targets www.mirbase.org...
Null hsa-miR-323-3p View Gene Set 8.648e-24 937 3.659e-23 160 microRNA targets for hsa-miR-323-3p from miranda.targets www.mirbase.org...
Null hsa-miR-142-3p View Gene Set 1.178e-23 1169 4.955e-23 161 microRNA targets for hsa-miR-142-3p from miranda.targets www.mirbase.org...
Null hsa-miR-194 View Gene Set 1.194e-23 1144 4.99e-23 162 microRNA targets for hsa-miR-194 from miranda.targets www.mirbase.org...
Null hsa-miR-876-5p View Gene Set 2.044e-23 1699 8.489e-23 163 microRNA targets for hsa-miR-876-5p from miranda.targets www.mirbase.org...
Null hsa-miR-216b View Gene Set 2.212e-23 1416 9.131e-23 164 microRNA targets for hsa-miR-216b from miranda.targets www.mirbase.org...
Null hsa-miR-363 View Gene Set 2.946e-23 1039 1.208e-22 165 microRNA targets for hsa-miR-363 from miranda.targets www.mirbase.org...
Null hsa-miR-520c-3p View Gene Set 2.961e-23 1842 1.208e-22 165 microRNA targets for hsa-miR-520c-3p from miranda.targets www.mirbase.org...
Null hsa-miR-630 View Gene Set 4.083e-23 1318 1.655e-22 167 microRNA targets for hsa-miR-630 from miranda.targets www.mirbase.org...
Null hsa-miR-337-3p View Gene Set 6.716e-23 876 2.706e-22 168 microRNA targets for hsa-miR-337-3p from miranda.targets www.mirbase.org...
Null hsa-miR-136 View Gene Set 9.988e-23 2134 4.001e-22 169 microRNA targets for hsa-miR-136 from miranda.targets www.mirbase.org...
Null hsa-miR-377 View Gene Set 1.374e-22 1713 5.471e-22 170 microRNA targets for hsa-miR-377 from miranda.targets www.mirbase.org...
Null hsa-miR-1279 View Gene Set 2.234e-22 809 8.844e-22 171 microRNA targets for hsa-miR-1279 from miranda.targets www.mirbase.org...
Null hsa-miR-199a-3p View Gene Set 2.388e-22 1232 9.345e-22 172 microRNA targets for hsa-miR-199a-3p from miranda.targets www.mirbase.org...
Null hsa-miR-199b-3p View Gene Set 2.388e-22 1232 9.345e-22 172 microRNA targets for hsa-miR-199b-3p from miranda.targets www.mirbase.org...
Null hsa-miR-297 View Gene Set 2.961e-22 1497 1.152e-21 174 microRNA targets for hsa-miR-297 from miranda.targets www.mirbase.org...
Null hsa-miR-32 View Gene Set 4.55e-22 1319 1.76e-21 175 microRNA targets for hsa-miR-32 from miranda.targets www.mirbase.org...
Null hsa-miR-206 View Gene Set 1.497e-21 1605 5.76e-21 176 microRNA targets for hsa-miR-206 from miranda.targets www.mirbase.org...
Null hsa-miR-520b View Gene Set 1.595e-21 1700 6.102e-21 177 microRNA targets for hsa-miR-520b from miranda.targets www.mirbase.org...
Null hsa-miR-330-3p View Gene Set 2.233e-21 2124 8.492e-21 178 microRNA targets for hsa-miR-330-3p from miranda.targets www.mirbase.org...
Null hsa-miR-140-5p View Gene Set 8.514e-21 1363 3.22e-20 179 microRNA targets for hsa-miR-140-5p from miranda.targets www.mirbase.org...
Null hsa-miR-148b View Gene Set 1.62e-20 1491 6.091e-20 180 microRNA targets for hsa-miR-148b from miranda.targets www.mirbase.org...
Null hsa-miR-182 View Gene Set 1.636e-20 1930 6.121e-20 181 microRNA targets for hsa-miR-182 from miranda.targets www.mirbase.org...
Null hsa-miR-376b View Gene Set 2.025e-20 1357 7.534e-20 182 microRNA targets for hsa-miR-376b from miranda.targets www.mirbase.org...
Null hsa-miR-488 View Gene Set 2.103e-20 1829 7.779e-20 183 microRNA targets for hsa-miR-488 from miranda.targets www.mirbase.org...
Null hsa-miR-520e View Gene Set 6.104e-20 1728 2.246e-19 184 microRNA targets for hsa-miR-520e from miranda.targets www.mirbase.org...
Null hsa-miR-556-5p View Gene Set 6.145e-20 1236 2.249e-19 185 microRNA targets for hsa-miR-556-5p from miranda.targets www.mirbase.org...
Null hsa-miR-25 View Gene Set 6.522e-20 1138 2.374e-19 186 microRNA targets for hsa-miR-25 from miranda.targets www.mirbase.org...
Null hsa-miR-148a View Gene Set 6.63e-20 1504 2.4e-19 187 microRNA targets for hsa-miR-148a from miranda.targets www.mirbase.org...
Null hsa-miR-520f View Gene Set 6.946e-20 1654 2.501e-19 188 microRNA targets for hsa-miR-520f from miranda.targets www.mirbase.org...
Null hsa-miR-376a View Gene Set 7.771e-20 1199 2.784e-19 189 microRNA targets for hsa-miR-376a from miranda.targets www.mirbase.org...
Null hsa-miR-618 View Gene Set 8.189e-20 1083 2.918e-19 190 microRNA targets for hsa-miR-618 from miranda.targets www.mirbase.org...
Null hsa-miR-485-3p View Gene Set 2.907e-19 1229 1.03e-18 191 microRNA targets for hsa-miR-485-3p from miranda.targets www.mirbase.org...
Null hsa-miR-562 View Gene Set 3.361e-19 1077 1.185e-18 192 microRNA targets for hsa-miR-562 from miranda.targets www.mirbase.org...
Null hsa-miR-320d View Gene Set 3.679e-19 1719 1.29e-18 193 microRNA targets for hsa-miR-320d from miranda.targets www.mirbase.org...
Null hsa-miR-519d View Gene Set 3.808e-19 1646 1.322e-18 194 microRNA targets for hsa-miR-519d from miranda.targets www.mirbase.org...
Null hsa-miR-556-3p View Gene Set 3.809e-19 822 1.322e-18 194 microRNA targets for hsa-miR-556-3p from miranda.targets www.mirbase.org...
Null hsa-miR-520d-3p View Gene Set 6.013e-19 1901 2.077e-18 196 microRNA targets for hsa-miR-520d-3p from miranda.targets www.mirbase.org...
Null hsa-miR-7 View Gene Set 6.262e-19 1890 2.152e-18 197 microRNA targets for hsa-miR-7 from miranda.targets www.mirbase.org...
Null hsa-miR-578 View Gene Set 8.118e-19 1735 2.776e-18 198 microRNA targets for hsa-miR-578 from miranda.targets www.mirbase.org...
Null hsa-miR-152 View Gene Set 8.437e-19 1451 2.87e-18 199 microRNA targets for hsa-miR-152 from miranda.targets www.mirbase.org...
Null hsa-miR-132 View Gene Set 1.548e-18 1259 5.239e-18 200 microRNA targets for hsa-miR-132 from miranda.targets www.mirbase.org...

Gene Set Collection: mirbase.targets

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null hsa-let-7a* View Gene Set 1.225e-16 772 4.356e-14 1 microRNA targets for hsa-let-7a* from mirbase.targets www.mirbase.org...
Null hsa-let-7b* View Gene Set 1.118e-16 772 4.356e-14 1 microRNA targets for hsa-let-7b* from mirbase.targets www.mirbase.org...
Null hsa-let-7f-1* View Gene Set 6.393e-16 751 1.136e-13 3 microRNA targets for hsa-let-7f-1* from mirbase.targets www.mirbase.org...
Null hsa-miR-590-3p View Gene Set 5.192e-16 742 1.136e-13 3 microRNA targets for hsa-miR-590-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-380 View Gene Set 2.991e-15 581 4.254e-13 5 microRNA targets for hsa-miR-380 from mirbase.targets www.mirbase.org...
Null hsa-miR-374b View Gene Set 7.64e-15 574 9.054e-13 6 microRNA targets for hsa-miR-374b from mirbase.targets www.mirbase.org...
Null hsa-miR-374a View Gene Set 1.586e-14 548 1.611e-12 7 microRNA targets for hsa-miR-374a from mirbase.targets www.mirbase.org...
Null hsa-miR-548c-3p View Gene Set 1.925e-14 863 1.711e-12 8 microRNA targets for hsa-miR-548c-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-548b-5p View Gene Set 8.586e-14 818 6.783e-12 9 microRNA targets for hsa-miR-548b-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-568 View Gene Set 9.575e-14 649 6.808e-12 10 microRNA targets for hsa-miR-568 from mirbase.targets www.mirbase.org...
Null hsa-miR-144 View Gene Set 1.353e-13 796 8.444e-12 11 microRNA targets for hsa-miR-144 from mirbase.targets www.mirbase.org...
Null hsa-miR-338-5p View Gene Set 1.425e-13 814 8.444e-12 11 microRNA targets for hsa-miR-338-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-548a-5p View Gene Set 2.101e-13 763 1.149e-11 13 microRNA targets for hsa-miR-548a-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-606 View Gene Set 2.931e-13 596 1.489e-11 14 microRNA targets for hsa-miR-606 from mirbase.targets www.mirbase.org...
Null hsa-miR-548a-3p View Gene Set 4.346e-13 899 2.06e-11 15 microRNA targets for hsa-miR-548a-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-200b View Gene Set 6.079e-13 854 2.701e-11 16 microRNA targets for hsa-miR-200b from mirbase.targets www.mirbase.org...
Null hsa-miR-142-5p View Gene Set 7.643e-13 661 3.196e-11 17 microRNA targets for hsa-miR-142-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-302c* View Gene Set 8.978e-13 615 3.36e-11 18 microRNA targets for hsa-miR-302c* from mirbase.targets www.mirbase.org...
Null hsa-miR-548d-3p View Gene Set 8.98e-13 978 3.36e-11 18 microRNA targets for hsa-miR-548d-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-410 View Gene Set 7.587e-12 614 2.697e-10 20 microRNA targets for hsa-miR-410 from mirbase.targets www.mirbase.org...
Null hsa-miR-548d-5p View Gene Set 9.076e-12 795 3.073e-10 21 microRNA targets for hsa-miR-548d-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-656 View Gene Set 1.343e-11 514 4.341e-10 22 microRNA targets for hsa-miR-656 from mirbase.targets www.mirbase.org...
Null hsa-miR-548c-5p View Gene Set 1.797e-11 801 5.537e-10 23 microRNA targets for hsa-miR-548c-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-944 View Gene Set 1.869e-11 567 5.537e-10 23 microRNA targets for hsa-miR-944 from mirbase.targets www.mirbase.org...
Null hsa-miR-655 View Gene Set 2.169e-11 654 6.169e-10 25 microRNA targets for hsa-miR-655 from mirbase.targets www.mirbase.org...
Null hsa-miR-495 View Gene Set 2.76e-11 796 7.548e-10 26 microRNA targets for hsa-miR-495 from mirbase.targets www.mirbase.org...
Null hsa-let-7d* View Gene Set 3.292e-11 781 8.669e-10 27 microRNA targets for hsa-let-7d* from mirbase.targets www.mirbase.org...
Null hsa-miR-200c View Gene Set 4.154e-11 871 1.055e-09 28 microRNA targets for hsa-miR-200c from mirbase.targets www.mirbase.org...
Null hsa-miR-369-3p View Gene Set 4.326e-11 750 1.061e-09 29 microRNA targets for hsa-miR-369-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-561 View Gene Set 4.771e-11 651 1.131e-09 30 microRNA targets for hsa-miR-561 from mirbase.targets www.mirbase.org...
Null hsa-miR-889 View Gene Set 6.654e-11 650 1.526e-09 31 microRNA targets for hsa-miR-889 from mirbase.targets www.mirbase.org...
Null hsa-miR-301b View Gene Set 8.144e-11 763 1.81e-09 32 microRNA targets for hsa-miR-301b from mirbase.targets www.mirbase.org...
Null hsa-miR-130a View Gene Set 9.328e-11 807 2.01e-09 33 microRNA targets for hsa-miR-130a from mirbase.targets www.mirbase.org...
Null hsa-miR-9* View Gene Set 1.394e-10 570 2.914e-09 34 microRNA targets for hsa-miR-9* from mirbase.targets www.mirbase.org...
Null hsa-miR-190 View Gene Set 2.644e-10 668 5.371e-09 35 microRNA targets for hsa-miR-190 from mirbase.targets www.mirbase.org...
Null hsa-miR-379* View Gene Set 5.396e-10 511 1.066e-08 36 microRNA targets for hsa-miR-379* from mirbase.targets www.mirbase.org...
Null hsa-miR-633 View Gene Set 7.093e-10 568 1.363e-08 37 microRNA targets for hsa-miR-633 from mirbase.targets www.mirbase.org...
Null hsa-miR-26b View Gene Set 8.599e-10 696 1.609e-08 38 microRNA targets for hsa-miR-26b from mirbase.targets www.mirbase.org...
Null hsa-miR-7-2* View Gene Set 1.224e-09 531 2.232e-08 39 microRNA targets for hsa-miR-7-2* from mirbase.targets www.mirbase.org...
Null hsa-miR-429 View Gene Set 1.308e-09 793 2.325e-08 40 microRNA targets for hsa-miR-429 from mirbase.targets www.mirbase.org...
Null hsa-miR-301a View Gene Set 1.43e-09 798 2.481e-08 41 microRNA targets for hsa-miR-301a from mirbase.targets www.mirbase.org...
Null hsa-miR-26a View Gene Set 1.536e-09 718 2.54e-08 42 microRNA targets for hsa-miR-26a from mirbase.targets www.mirbase.org...
Null hsa-miR-559 View Gene Set 1.516e-09 463 2.54e-08 42 microRNA targets for hsa-miR-559 from mirbase.targets www.mirbase.org...
Null hsa-miR-496 View Gene Set 1.753e-09 640 2.833e-08 44 microRNA targets for hsa-miR-496 from mirbase.targets www.mirbase.org...
Null hsa-miR-101 View Gene Set 2.007e-09 818 3.17e-08 45 microRNA targets for hsa-miR-101 from mirbase.targets www.mirbase.org...
Null hsa-miR-126* View Gene Set 2.281e-09 549 3.525e-08 46 microRNA targets for hsa-miR-126* from mirbase.targets www.mirbase.org...
Null hsa-miR-200a View Gene Set 3.051e-09 908 4.615e-08 47 microRNA targets for hsa-miR-200a from mirbase.targets www.mirbase.org...
Null hsa-miR-302d* View Gene Set 3.374e-09 693 4.933e-08 48 microRNA targets for hsa-miR-302d* from mirbase.targets www.mirbase.org...
Null hsa-miR-590-5p View Gene Set 3.4e-09 837 4.933e-08 48 microRNA targets for hsa-miR-590-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-141 View Gene Set 1.006e-08 812 1.402e-07 50 microRNA targets for hsa-miR-141 from mirbase.targets www.mirbase.org...
Null hsa-miR-302b* View Gene Set 9.866e-09 683 1.402e-07 50 microRNA targets for hsa-miR-302b* from mirbase.targets www.mirbase.org...
Null hsa-miR-340 View Gene Set 1.112e-08 581 1.52e-07 52 microRNA targets for hsa-miR-340 from mirbase.targets www.mirbase.org...
Null hsa-miR-7-1* View Gene Set 2.568e-08 524 3.445e-07 53 microRNA targets for hsa-miR-7-1* from mirbase.targets www.mirbase.org...
Null hsa-miR-411* View Gene Set 4.126e-08 541 5.432e-07 54 microRNA targets for hsa-miR-411* from mirbase.targets www.mirbase.org...
Null hsa-miR-376b View Gene Set 4.685e-08 779 6.056e-07 55 microRNA targets for hsa-miR-376b from mirbase.targets www.mirbase.org...
Null hsa-miR-513-3p View Gene Set 6.762e-08 704 8.585e-07 56 microRNA targets for hsa-miR-513-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-499-5p View Gene Set 7.252e-08 761 9.045e-07 57 microRNA targets for hsa-miR-499-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-302a* View Gene Set 7.792e-08 644 9.552e-07 58 microRNA targets for hsa-miR-302a* from mirbase.targets www.mirbase.org...
Null hsa-miR-582-3p View Gene Set 8.182e-08 821 9.86e-07 59 microRNA targets for hsa-miR-582-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-448 View Gene Set 9.365e-08 660 1.11e-06 60 microRNA targets for hsa-miR-448 from mirbase.targets www.mirbase.org...
Null hsa-miR-888 View Gene Set 1.04e-07 699 1.213e-06 61 microRNA targets for hsa-miR-888 from mirbase.targets www.mirbase.org...
Null hsa-miR-577 View Gene Set 1.083e-07 452 1.242e-06 62 microRNA targets for hsa-miR-577 from mirbase.targets www.mirbase.org...
Null hsa-miR-454 View Gene Set 1.314e-07 769 1.482e-06 63 microRNA targets for hsa-miR-454 from mirbase.targets www.mirbase.org...
Null hsa-miR-186 View Gene Set 1.397e-07 589 1.552e-06 64 microRNA targets for hsa-miR-186 from mirbase.targets www.mirbase.org...
Null hsa-miR-522 View Gene Set 1.664e-07 665 1.821e-06 65 microRNA targets for hsa-miR-522 from mirbase.targets www.mirbase.org...
Null hsa-miR-493* View Gene Set 1.952e-07 522 2.103e-06 66 microRNA targets for hsa-miR-493* from mirbase.targets www.mirbase.org...
Null hsa-miR-452 View Gene Set 3.754e-07 729 3.984e-06 67 microRNA targets for hsa-miR-452 from mirbase.targets www.mirbase.org...
Null hsa-miR-101* View Gene Set 4.028e-07 605 4.212e-06 68 microRNA targets for hsa-miR-101* from mirbase.targets www.mirbase.org...
Null hsa-miR-19a View Gene Set 4.097e-07 803 4.221e-06 69 microRNA targets for hsa-miR-19a from mirbase.targets www.mirbase.org...
Null hsa-miR-586 View Gene Set 4.164e-07 721 4.23e-06 70 microRNA targets for hsa-miR-586 from mirbase.targets www.mirbase.org...
Null hsa-miR-582-5p View Gene Set 4.473e-07 759 4.48e-06 71 microRNA targets for hsa-miR-582-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-106b View Gene Set 4.886e-07 872 4.825e-06 72 microRNA targets for hsa-miR-106b from mirbase.targets www.mirbase.org...
Null hsa-miR-374a* View Gene Set 5.888e-07 491 5.734e-06 73 microRNA targets for hsa-miR-374a* from mirbase.targets www.mirbase.org...
Null hsa-miR-203 View Gene Set 5.991e-07 628 5.756e-06 74 microRNA targets for hsa-miR-203 from mirbase.targets www.mirbase.org...
Null hsa-miR-208b View Gene Set 7.806e-07 678 7.4e-06 75 microRNA targets for hsa-miR-208b from mirbase.targets www.mirbase.org...
Null hsa-miR-33a* View Gene Set 8.558e-07 530 8.006e-06 76 microRNA targets for hsa-miR-33a* from mirbase.targets www.mirbase.org...
Null hsa-miR-323-3p View Gene Set 8.895e-07 756 8.18e-06 77 microRNA targets for hsa-miR-323-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-569 View Gene Set 8.974e-07 625 8.18e-06 77 microRNA targets for hsa-miR-569 from mirbase.targets www.mirbase.org...
Null hsa-miR-30b View Gene Set 9.869e-07 807 8.882e-06 79 microRNA targets for hsa-miR-30b from mirbase.targets www.mirbase.org...
Null hsa-miR-553 View Gene Set 1.215e-06 672 1.08e-05 80 microRNA targets for hsa-miR-553 from mirbase.targets www.mirbase.org...
Null hsa-miR-32* View Gene Set 1.425e-06 384 1.251e-05 81 microRNA targets for hsa-miR-32* from mirbase.targets www.mirbase.org...
Null hsa-miR-768-3p View Gene Set 1.508e-06 770 1.307e-05 82 microRNA targets for hsa-miR-768-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-190b View Gene Set 1.775e-06 666 1.521e-05 83 microRNA targets for hsa-miR-190b from mirbase.targets www.mirbase.org...
Null hsa-miR-576-5p View Gene Set 1.978e-06 713 1.675e-05 84 microRNA targets for hsa-miR-576-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-30e View Gene Set 3.047e-06 773 2.549e-05 85 microRNA targets for hsa-miR-30e from mirbase.targets www.mirbase.org...
Null hsa-miR-155 View Gene Set 3.244e-06 740 2.66e-05 86 microRNA targets for hsa-miR-155 from mirbase.targets www.mirbase.org...
Null hsa-miR-376a View Gene Set 3.255e-06 746 2.66e-05 86 microRNA targets for hsa-miR-376a from mirbase.targets www.mirbase.org...
Null hsa-let-7f-2* View Gene Set 4.14e-06 820 3.345e-05 88 microRNA targets for hsa-let-7f-2* from mirbase.targets www.mirbase.org...
Null hsa-miR-519a View Gene Set 4.231e-06 964 3.38e-05 89 microRNA targets for hsa-miR-519a from mirbase.targets www.mirbase.org...
Null hsa-miR-651 View Gene Set 4.957e-06 676 3.916e-05 90 microRNA targets for hsa-miR-651 from mirbase.targets www.mirbase.org...
Null hsa-miR-802 View Gene Set 5.228e-06 683 4.084e-05 91 microRNA targets for hsa-miR-802 from mirbase.targets www.mirbase.org...
Null hsa-miR-208 View Gene Set 5.526e-06 664 4.27e-05 92 microRNA targets for hsa-miR-208 from mirbase.targets www.mirbase.org...
Null hsa-miR-450a View Gene Set 5.698e-06 787 4.356e-05 93 microRNA targets for hsa-miR-450a from mirbase.targets www.mirbase.org...
Null hsa-miR-451 View Gene Set 5.948e-06 766 4.499e-05 94 microRNA targets for hsa-miR-451 from mirbase.targets www.mirbase.org...
Null hsa-miR-363 View Gene Set 6.221e-06 678 4.656e-05 95 microRNA targets for hsa-miR-363 from mirbase.targets www.mirbase.org...
Null hsa-miR-181d View Gene Set 7.734e-06 864 5.728e-05 96 microRNA targets for hsa-miR-181d from mirbase.targets www.mirbase.org...
Null hsa-miR-130b View Gene Set 8.901e-06 809 6.458e-05 97 microRNA targets for hsa-miR-130b from mirbase.targets www.mirbase.org...
Null hsa-miR-142-3p View Gene Set 8.852e-06 756 6.458e-05 97 microRNA targets for hsa-miR-142-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-15b* View Gene Set 1.034e-05 587 7.426e-05 99 microRNA targets for hsa-miR-15b* from mirbase.targets www.mirbase.org...
Null hsa-miR-450b-5p View Gene Set 1.123e-05 732 7.906e-05 100 microRNA targets for hsa-miR-450b-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-520g View Gene Set 1.122e-05 776 7.906e-05 100 microRNA targets for hsa-miR-520g from mirbase.targets www.mirbase.org...
Null hsa-miR-1 View Gene Set 1.224e-05 659 8.534e-05 102 microRNA targets for hsa-miR-1 from mirbase.targets www.mirbase.org...
Null hsa-miR-181c View Gene Set 1.872e-05 855 0.0001292 103 microRNA targets for hsa-miR-181c from mirbase.targets www.mirbase.org...
Null hsa-miR-551b* View Gene Set 2.2e-05 473 0.0001504 104 microRNA targets for hsa-miR-551b* from mirbase.targets www.mirbase.org...
Null hsa-miR-30c View Gene Set 2.577e-05 799 0.0001745 105 microRNA targets for hsa-miR-30c from mirbase.targets www.mirbase.org...
Null hsa-miR-494 View Gene Set 2.818e-05 637 0.000189 106 microRNA targets for hsa-miR-494 from mirbase.targets www.mirbase.org...
Null hsa-miR-409-3p View Gene Set 4.467e-05 654 0.0002968 107 microRNA targets for hsa-miR-409-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-21 View Gene Set 4.528e-05 724 0.0002981 108 microRNA targets for hsa-miR-21 from mirbase.targets www.mirbase.org...
Null hsa-miR-217 View Gene Set 4.612e-05 665 0.0003008 109 microRNA targets for hsa-miR-217 from mirbase.targets www.mirbase.org...
Null hsa-miR-579 View Gene Set 5.006e-05 664 0.0003236 110 microRNA targets for hsa-miR-579 from mirbase.targets www.mirbase.org...
Null hsa-miR-570 View Gene Set 5.913e-05 603 0.0003788 111 microRNA targets for hsa-miR-570 from mirbase.targets www.mirbase.org...
Null hsa-miR-96* View Gene Set 6.346e-05 491 0.0004029 112 microRNA targets for hsa-miR-96* from mirbase.targets www.mirbase.org...
Null hsa-miR-20a* View Gene Set 6.839e-05 613 0.0004265 113 microRNA targets for hsa-miR-20a* from mirbase.targets www.mirbase.org...
Null hsa-miR-223 View Gene Set 6.811e-05 727 0.0004265 113 microRNA targets for hsa-miR-223 from mirbase.targets www.mirbase.org...
Null hsa-miR-508-3p View Gene Set 6.981e-05 690 0.0004316 115 microRNA targets for hsa-miR-508-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-382 View Gene Set 7.279e-05 714 0.0004461 116 microRNA targets for hsa-miR-382 from mirbase.targets www.mirbase.org...
Null hsa-miR-549 View Gene Set 7.544e-05 718 0.0004585 117 microRNA targets for hsa-miR-549 from mirbase.targets www.mirbase.org...
Null hsa-miR-649 View Gene Set 8.84e-05 712 0.0005326 118 microRNA targets for hsa-miR-649 from mirbase.targets www.mirbase.org...
Null hsa-miR-106a View Gene Set 9.031e-05 774 0.0005351 119 microRNA targets for hsa-miR-106a from mirbase.targets www.mirbase.org...
Null hsa-miR-607 View Gene Set 8.963e-05 620 0.0005351 119 microRNA targets for hsa-miR-607 from mirbase.targets www.mirbase.org...
Null hsa-miR-144* View Gene Set 9.851e-05 446 0.0005784 121 microRNA targets for hsa-miR-144* from mirbase.targets www.mirbase.org...
Null hsa-miR-519c-3p View Gene Set 9.988e-05 958 0.0005784 121 microRNA targets for hsa-miR-519c-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-556-3p View Gene Set 0.0001001 806 0.0005784 121 microRNA targets for hsa-miR-556-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-871 View Gene Set 0.000111 707 0.0006364 124 microRNA targets for hsa-miR-871 from mirbase.targets www.mirbase.org...
Null hsa-miR-191 View Gene Set 0.0001218 709 0.0006929 125 microRNA targets for hsa-miR-191 from mirbase.targets www.mirbase.org...
Null hsa-miR-708* View Gene Set 0.0001398 568 0.000789 126 microRNA targets for hsa-miR-708* from mirbase.targets www.mirbase.org...
Null hsa-miR-580 View Gene Set 0.0001431 530 0.000801 127 microRNA targets for hsa-miR-580 from mirbase.targets www.mirbase.org...
Null hsa-miR-545 View Gene Set 0.0001462 761 0.0008119 128 microRNA targets for hsa-miR-545 from mirbase.targets www.mirbase.org...
Null hsa-miR-181a View Gene Set 0.000177 842 0.0009757 129 microRNA targets for hsa-miR-181a from mirbase.targets www.mirbase.org...
Null hsa-miR-653 View Gene Set 0.000179 580 0.0009788 130 microRNA targets for hsa-miR-653 from mirbase.targets www.mirbase.org...
Null hsa-miR-137 View Gene Set 0.0001973 775 0.001071 131 microRNA targets for hsa-miR-137 from mirbase.targets www.mirbase.org...
Null hsa-miR-183* View Gene Set 0.0002039 495 0.001098 132 microRNA targets for hsa-miR-183* from mirbase.targets www.mirbase.org...
Null hsa-miR-487a View Gene Set 0.0002161 689 0.001155 133 microRNA targets for hsa-miR-487a from mirbase.targets www.mirbase.org...
Null hsa-miR-302d View Gene Set 0.0002275 671 0.001206 134 microRNA targets for hsa-miR-302d from mirbase.targets www.mirbase.org...
Null hsa-miR-32 View Gene Set 0.000229 653 0.001206 134 microRNA targets for hsa-miR-32 from mirbase.targets www.mirbase.org...
Null hsa-miR-361-5p View Gene Set 0.0002413 677 0.001262 136 microRNA targets for hsa-miR-361-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-154 View Gene Set 0.0002468 649 0.001281 137 microRNA targets for hsa-miR-154 from mirbase.targets www.mirbase.org...
Null hsa-miR-16-2* View Gene Set 0.0002501 507 0.001289 138 microRNA targets for hsa-miR-16-2* from mirbase.targets www.mirbase.org...
Null hsa-miR-19a* View Gene Set 0.0002632 536 0.001346 139 microRNA targets for hsa-miR-19a* from mirbase.targets www.mirbase.org...
Null hsa-miR-105 View Gene Set 0.0002691 719 0.001366 140 microRNA targets for hsa-miR-105 from mirbase.targets www.mirbase.org...
Null hsa-miR-10a* View Gene Set 0.0002735 585 0.001379 141 microRNA targets for hsa-miR-10a* from mirbase.targets www.mirbase.org...
Null hsa-miR-181b View Gene Set 0.0002904 874 0.001454 142 microRNA targets for hsa-miR-181b from mirbase.targets www.mirbase.org...
Null hsa-miR-19b View Gene Set 0.0003047 789 0.001515 143 microRNA targets for hsa-miR-19b from mirbase.targets www.mirbase.org...
Null hsa-miR-587 View Gene Set 0.0003154 739 0.001557 144 microRNA targets for hsa-miR-587 from mirbase.targets www.mirbase.org...
Null hsa-miR-507 View Gene Set 0.0003289 721 0.001613 145 microRNA targets for hsa-miR-507 from mirbase.targets www.mirbase.org...
Null hsa-miR-23a View Gene Set 0.0003452 807 0.001681 146 microRNA targets for hsa-miR-23a from mirbase.targets www.mirbase.org...
Null hsa-miR-630 View Gene Set 0.0003722 702 0.0018 147 microRNA targets for hsa-miR-630 from mirbase.targets www.mirbase.org...
Null hsa-miR-302b View Gene Set 0.000411 738 0.001975 148 microRNA targets for hsa-miR-302b from mirbase.targets www.mirbase.org...
Null hsa-miR-519b-3p View Gene Set 0.000439 957 0.002095 149 microRNA targets for hsa-miR-519b-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-628-3p View Gene Set 0.0004635 705 0.002197 150 microRNA targets for hsa-miR-628-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-520h View Gene Set 0.0004905 781 0.00231 151 microRNA targets for hsa-miR-520h from mirbase.targets www.mirbase.org...
Null hsa-miR-616* View Gene Set 0.0005317 533 0.002487 152 microRNA targets for hsa-miR-616* from mirbase.targets www.mirbase.org...
Null hsa-miR-195* View Gene Set 0.0005618 446 0.002611 153 microRNA targets for hsa-miR-195* from mirbase.targets www.mirbase.org...
Null hsa-miR-20a View Gene Set 0.0007059 823 0.003259 154 microRNA targets for hsa-miR-20a from mirbase.targets www.mirbase.org...
Null hsa-miR-891b View Gene Set 0.0007122 755 0.003267 155 microRNA targets for hsa-miR-891b from mirbase.targets www.mirbase.org...
Null hsa-miR-19b-2* View Gene Set 0.0007997 553 0.003645 156 microRNA targets for hsa-miR-19b-2* from mirbase.targets www.mirbase.org...
Null hsa-miR-16-1* View Gene Set 0.0008702 557 0.003941 157 microRNA targets for hsa-miR-16-1* from mirbase.targets www.mirbase.org...
Null hsa-miR-376c View Gene Set 0.0008768 763 0.003946 158 microRNA targets for hsa-miR-376c from mirbase.targets www.mirbase.org...
Null hsa-miR-136* View Gene Set 0.0009485 557 0.004242 159 microRNA targets for hsa-miR-136* from mirbase.targets www.mirbase.org...
Null hsa-miR-548b-3p View Gene Set 0.001001 970 0.004449 160 microRNA targets for hsa-miR-548b-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-219-5p View Gene Set 0.001042 816 0.004603 161 microRNA targets for hsa-miR-219-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-543 View Gene Set 0.001053 760 0.004621 162 microRNA targets for hsa-miR-543 from mirbase.targets www.mirbase.org...
Null hsa-miR-545* View Gene Set 0.001244 518 0.005428 163 microRNA targets for hsa-miR-545* from mirbase.targets www.mirbase.org...
Null hsa-miR-337-5p View Gene Set 0.001261 795 0.005466 164 microRNA targets for hsa-miR-337-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-539 View Gene Set 0.001335 539 0.005754 165 microRNA targets for hsa-miR-539 from mirbase.targets www.mirbase.org...
Null hsa-miR-199a-3p View Gene Set 0.001349 789 0.005778 166 microRNA targets for hsa-miR-199a-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-17 View Gene Set 0.001836 935 0.007815 167 microRNA targets for hsa-miR-17 from mirbase.targets www.mirbase.org...
Null hsa-miR-196a View Gene Set 0.002014 808 0.008525 168 microRNA targets for hsa-miR-196a from mirbase.targets www.mirbase.org...
Null hsa-miR-302a View Gene Set 0.002033 711 0.008554 169 microRNA targets for hsa-miR-302a from mirbase.targets www.mirbase.org...
Null hsa-miR-573 View Gene Set 0.002176 696 0.009102 170 microRNA targets for hsa-miR-573 from mirbase.targets www.mirbase.org...
Null hsa-miR-106a* View Gene Set 0.002207 554 0.009175 171 microRNA targets for hsa-miR-106a* from mirbase.targets www.mirbase.org...
Null hsa-miR-30a View Gene Set 0.002228 767 0.009208 172 microRNA targets for hsa-miR-30a from mirbase.targets www.mirbase.org...
Null hsa-miR-520f View Gene Set 0.00241 975 0.009907 173 microRNA targets for hsa-miR-520f from mirbase.targets www.mirbase.org...
Null hsa-miR-625* View Gene Set 0.003014 455 0.01232 174 microRNA targets for hsa-miR-625* from mirbase.targets www.mirbase.org...
Null hsa-miR-487b View Gene Set 0.003262 670 0.01325 175 microRNA targets for hsa-miR-487b from mirbase.targets www.mirbase.org...
Null hsa-miR-148b View Gene Set 0.00361 832 0.01458 176 microRNA targets for hsa-miR-148b from mirbase.targets www.mirbase.org...
Null hsa-miR-519d View Gene Set 0.003874 779 0.01556 177 microRNA targets for hsa-miR-519d from mirbase.targets www.mirbase.org...
Null hsa-miR-567 View Gene Set 0.003973 618 0.01587 178 microRNA targets for hsa-miR-567 from mirbase.targets www.mirbase.org...
Null hsa-miR-335 View Gene Set 0.004503 729 0.01781 179 microRNA targets for hsa-miR-335 from mirbase.targets www.mirbase.org...
Null hsa-miR-335* View Gene Set 0.004509 465 0.01781 179 microRNA targets for hsa-miR-335* from mirbase.targets www.mirbase.org...
Null hsa-miR-23b View Gene Set 0.004625 772 0.01817 181 microRNA targets for hsa-miR-23b from mirbase.targets www.mirbase.org...
Null hsa-miR-154* View Gene Set 0.004701 516 0.01826 182 microRNA targets for hsa-miR-154* from mirbase.targets www.mirbase.org...
Null hsa-miR-562 View Gene Set 0.00468 697 0.01826 182 microRNA targets for hsa-miR-562 from mirbase.targets www.mirbase.org...
Null hsa-miR-215 View Gene Set 0.00474 724 0.01832 184 microRNA targets for hsa-miR-215 from mirbase.targets www.mirbase.org...
Null hsa-miR-488 View Gene Set 0.00479 657 0.01841 185 microRNA targets for hsa-miR-488 from mirbase.targets www.mirbase.org...
Null hsa-miR-592 View Gene Set 0.00495 658 0.01892 186 microRNA targets for hsa-miR-592 from mirbase.targets www.mirbase.org...
Null hsa-miR-30d View Gene Set 0.00507 770 0.01928 187 microRNA targets for hsa-miR-30d from mirbase.targets www.mirbase.org...
Null hsa-miR-95 View Gene Set 0.005136 787 0.01942 188 microRNA targets for hsa-miR-95 from mirbase.targets www.mirbase.org...
Null hsa-miR-30e* View Gene Set 0.005479 696 0.02061 189 microRNA targets for hsa-miR-30e* from mirbase.targets www.mirbase.org...
Null hsa-miR-491-3p View Gene Set 0.005547 767 0.02076 190 microRNA targets for hsa-miR-491-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-641 View Gene Set 0.005633 629 0.02097 191 microRNA targets for hsa-miR-641 from mirbase.targets www.mirbase.org...
Null hsa-miR-520a-3p View Gene Set 0.005664 842 0.02097 192 microRNA targets for hsa-miR-520a-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-34b View Gene Set 0.00633 776 0.02332 193 microRNA targets for hsa-miR-34b from mirbase.targets www.mirbase.org...
Null hsa-miR-148a View Gene Set 0.006493 800 0.0238 194 microRNA targets for hsa-miR-148a from mirbase.targets www.mirbase.org...
Null hsa-miR-556-5p View Gene Set 0.006708 739 0.02446 195 microRNA targets for hsa-miR-556-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-302c View Gene Set 0.007187 737 0.02607 196 microRNA targets for hsa-miR-302c from mirbase.targets www.mirbase.org...
Null hsa-miR-381 View Gene Set 0.007238 643 0.02612 197 microRNA targets for hsa-miR-381 from mirbase.targets www.mirbase.org...
Null hsa-miR-524-5p View Gene Set 0.00755 708 0.02711 198 microRNA targets for hsa-miR-524-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-130a* View Gene Set 0.008192 606 0.02927 199 microRNA targets for hsa-miR-130a* from mirbase.targets www.mirbase.org...
Null hsa-miR-219-2-3p View Gene Set 0.008735 696 0.03105 200 microRNA targets for hsa-miR-219-2-3p from mirbase.targets www.mirbase.org...

Gene Set Collection: mirtarget2.targets

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null hsa-miR-590-3p View Gene Set 1.528e-91 2046 8.451e-89 1 microRNA targets for hsa-miR-590-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-548c-3p View Gene Set 1.14e-64 1804 3.151e-62 2 microRNA targets for hsa-miR-548c-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-513-3p View Gene Set 2.274e-63 1119 4.192e-61 3 microRNA targets for hsa-miR-513-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-944 View Gene Set 4.277e-59 1362 5.912e-57 4 microRNA targets for hsa-miR-944 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-607 View Gene Set 9.624e-53 1137 1.064e-50 5 microRNA targets for hsa-miR-607 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-548b-5p View Gene Set 3.16e-52 1157 2.912e-50 6 microRNA targets for hsa-miR-548b-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-548a-5p View Gene Set 2.18e-51 1120 1.507e-49 7 microRNA targets for hsa-miR-548a-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-548d-5p View Gene Set 2.156e-51 1147 1.507e-49 7 microRNA targets for hsa-miR-548d-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-548c-5p View Gene Set 2.921e-51 1151 1.795e-49 9 microRNA targets for hsa-miR-548c-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-548a-3p View Gene Set 2.837e-48 900 1.569e-46 10 microRNA targets for hsa-miR-548a-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-561 View Gene Set 2.572e-45 1193 1.293e-43 11 microRNA targets for hsa-miR-561 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-186 View Gene Set 3.24e-44 1020 1.493e-42 12 microRNA targets for hsa-miR-186 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-559 View Gene Set 3.766e-44 977 1.602e-42 13 microRNA targets for hsa-miR-559 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-655 View Gene Set 1.083e-41 820 4.276e-40 14 microRNA targets for hsa-miR-655 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-577 View Gene Set 7.429e-40 731 2.739e-38 15 microRNA targets for hsa-miR-577 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-338-5p View Gene Set 1.94e-38 948 6.706e-37 16 microRNA targets for hsa-miR-338-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-23b View Gene Set 4.071e-38 875 1.324e-36 17 microRNA targets for hsa-miR-23b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-548d-3p View Gene Set 1.305e-37 1107 4.011e-36 18 microRNA targets for hsa-miR-548d-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-23a View Gene Set 5.428e-37 858 1.58e-35 19 microRNA targets for hsa-miR-23a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-494 View Gene Set 1.667e-36 696 4.61e-35 20 microRNA targets for hsa-miR-494 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-524-5p View Gene Set 2.309e-36 862 6.081e-35 21 microRNA targets for hsa-miR-524-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-582-5p View Gene Set 1.272e-34 526 3.197e-33 22 microRNA targets for hsa-miR-582-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-520d-5p View Gene Set 2.612e-34 826 6.28e-33 23 microRNA targets for hsa-miR-520d-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-374b View Gene Set 1.153e-33 902 2.657e-32 24 microRNA targets for hsa-miR-374b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-340 View Gene Set 1.75e-33 874 3.87e-32 25 microRNA targets for hsa-miR-340 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-142-5p View Gene Set 2.676e-33 727 5.691e-32 26 microRNA targets for hsa-miR-142-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-374a View Gene Set 1.308e-32 894 2.68e-31 27 microRNA targets for hsa-miR-374a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-576-5p View Gene Set 1.99e-32 589 3.929e-31 28 microRNA targets for hsa-miR-576-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-203 View Gene Set 2.445e-32 754 4.662e-31 29 microRNA targets for hsa-miR-203 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-200b View Gene Set 1.147e-31 671 2.114e-30 30 microRNA targets for hsa-miR-200b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-495 View Gene Set 2.435e-31 1246 4.344e-30 31 microRNA targets for hsa-miR-495 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-200c View Gene Set 4.322e-31 668 7.469e-30 32 microRNA targets for hsa-miR-200c from mirtarget2.targets www.mirbase.org...
Null hsa-miR-570 View Gene Set 2.783e-30 983 4.663e-29 33 microRNA targets for hsa-miR-570 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-144 View Gene Set 8.17e-29 649 1.329e-27 34 microRNA targets for hsa-miR-144 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-369-3p View Gene Set 9.335e-29 686 1.475e-27 35 microRNA targets for hsa-miR-369-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-543 View Gene Set 3.048e-28 710 4.682e-27 36 microRNA targets for hsa-miR-543 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-656 View Gene Set 7.805e-28 876 1.167e-26 37 microRNA targets for hsa-miR-656 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-410 View Gene Set 4.669e-27 563 6.795e-26 38 microRNA targets for hsa-miR-410 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-181a View Gene Set 6.049e-27 879 8.577e-26 39 microRNA targets for hsa-miR-181a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-520g View Gene Set 7.69e-27 429 1.063e-25 40 microRNA targets for hsa-miR-520g from mirtarget2.targets www.mirbase.org...
Null hsa-miR-181c View Gene Set 1.019e-26 909 1.374e-25 41 microRNA targets for hsa-miR-181c from mirtarget2.targets www.mirbase.org...
Null hsa-miR-429 View Gene Set 1.484e-26 640 1.954e-25 42 microRNA targets for hsa-miR-429 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-520h View Gene Set 1.601e-26 428 2.059e-25 43 microRNA targets for hsa-miR-520h from mirtarget2.targets www.mirbase.org...
Null hsa-miR-181b View Gene Set 3.234e-26 887 4.065e-25 44 microRNA targets for hsa-miR-181b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-181d View Gene Set 1.894e-25 882 2.327e-24 45 microRNA targets for hsa-miR-181d from mirtarget2.targets www.mirbase.org...
Null hsa-miR-200a View Gene Set 3.235e-25 589 3.889e-24 46 microRNA targets for hsa-miR-200a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-380 View Gene Set 6.463e-25 496 7.604e-24 47 microRNA targets for hsa-miR-380 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-141 View Gene Set 8.12e-25 574 9.355e-24 48 microRNA targets for hsa-miR-141 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-450b-5p View Gene Set 1.197e-24 691 1.351e-23 49 microRNA targets for hsa-miR-450b-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-587 View Gene Set 1.339e-24 590 1.481e-23 50 microRNA targets for hsa-miR-587 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-579 View Gene Set 1.445e-24 625 1.567e-23 51 microRNA targets for hsa-miR-579 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-26a View Gene Set 3.425e-24 498 3.642e-23 52 microRNA targets for hsa-miR-26a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-522 View Gene Set 3.754e-24 618 3.917e-23 53 microRNA targets for hsa-miR-522 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-101 View Gene Set 7.854e-24 433 8.043e-23 54 microRNA targets for hsa-miR-101 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-448 View Gene Set 8.461e-24 500 8.507e-23 55 microRNA targets for hsa-miR-448 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-641 View Gene Set 8.928e-24 659 8.817e-23 56 microRNA targets for hsa-miR-641 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-586 View Gene Set 2.702e-23 587 2.621e-22 57 microRNA targets for hsa-miR-586 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-26b View Gene Set 2.974e-23 493 2.835e-22 58 microRNA targets for hsa-miR-26b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-539 View Gene Set 5.564e-23 601 5.215e-22 59 microRNA targets for hsa-miR-539 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-300 View Gene Set 6.253e-23 528 5.763e-22 60 microRNA targets for hsa-miR-300 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-381 View Gene Set 1.749e-22 544 1.586e-21 61 microRNA targets for hsa-miR-381 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-452 View Gene Set 6.599e-22 577 5.885e-21 62 microRNA targets for hsa-miR-452 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-105 View Gene Set 1.979e-21 524 1.737e-20 63 microRNA targets for hsa-miR-105 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-568 View Gene Set 4.905e-21 521 4.238e-20 64 microRNA targets for hsa-miR-568 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-323-3p View Gene Set 1.034e-19 402 8.801e-19 65 microRNA targets for hsa-miR-323-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-130a View Gene Set 1.311e-19 440 1.098e-18 66 microRNA targets for hsa-miR-130a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-130b View Gene Set 4.335e-19 445 3.578e-18 67 microRNA targets for hsa-miR-130b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-320 View Gene Set 6.406e-19 550 5.21e-18 68 microRNA targets for hsa-miR-320 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-106a View Gene Set 7.987e-19 781 6.401e-18 69 microRNA targets for hsa-miR-106a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-802 View Gene Set 8.179e-19 428 6.461e-18 70 microRNA targets for hsa-miR-802 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-30a View Gene Set 1.094e-18 680 8.524e-18 71 microRNA targets for hsa-miR-30a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-606 View Gene Set 1.251e-18 282 9.606e-18 72 microRNA targets for hsa-miR-606 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-519d View Gene Set 1.282e-18 714 9.711e-18 73 microRNA targets for hsa-miR-519d from mirtarget2.targets www.mirbase.org...
Null hsa-miR-888 View Gene Set 1.399e-18 450 1.045e-17 74 microRNA targets for hsa-miR-888 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-20b View Gene Set 1.418e-18 795 1.045e-17 75 microRNA targets for hsa-miR-20b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-106b View Gene Set 1.84e-18 736 1.339e-17 76 microRNA targets for hsa-miR-106b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-871 View Gene Set 2.445e-18 570 1.756e-17 77 microRNA targets for hsa-miR-871 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-19a View Gene Set 2.612e-18 539 1.852e-17 78 microRNA targets for hsa-miR-19a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-301b View Gene Set 3.416e-18 442 2.391e-17 79 microRNA targets for hsa-miR-301b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-30d View Gene Set 4.487e-18 694 3.102e-17 80 microRNA targets for hsa-miR-30d from mirtarget2.targets www.mirbase.org...
Null hsa-miR-30e View Gene Set 6.965e-18 693 4.755e-17 81 microRNA targets for hsa-miR-30e from mirtarget2.targets www.mirbase.org...
Null hsa-miR-30b View Gene Set 7.159e-18 670 4.828e-17 82 microRNA targets for hsa-miR-30b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-20a View Gene Set 7.534e-18 754 5.02e-17 83 microRNA targets for hsa-miR-20a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-19b View Gene Set 8.102e-18 536 5.334e-17 84 microRNA targets for hsa-miR-19b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-330-3p View Gene Set 8.382e-18 682 5.453e-17 85 microRNA targets for hsa-miR-330-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-93 View Gene Set 8.75e-18 775 5.626e-17 86 microRNA targets for hsa-miR-93 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-17 View Gene Set 1.315e-17 784 8.36e-17 87 microRNA targets for hsa-miR-17 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-454 View Gene Set 2.308e-17 442 1.45e-16 88 microRNA targets for hsa-miR-454 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-545 View Gene Set 3.23e-17 600 2.007e-16 89 microRNA targets for hsa-miR-545 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-30c View Gene Set 5.266e-17 665 3.235e-16 90 microRNA targets for hsa-miR-30c from mirtarget2.targets www.mirbase.org...
Null hsa-miR-155 View Gene Set 7.862e-17 427 4.777e-16 91 microRNA targets for hsa-miR-155 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-519a View Gene Set 1.066e-16 486 6.405e-16 92 microRNA targets for hsa-miR-519a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-433 View Gene Set 1.122e-16 301 6.67e-16 93 microRNA targets for hsa-miR-433 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-501-5p View Gene Set 1.344e-16 462 7.906e-16 94 microRNA targets for hsa-miR-501-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-301a View Gene Set 2.501e-16 448 1.456e-15 95 microRNA targets for hsa-miR-301a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-519b-3p View Gene Set 2.751e-16 484 1.585e-15 96 microRNA targets for hsa-miR-519b-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-511 View Gene Set 4.129e-16 733 2.354e-15 97 microRNA targets for hsa-miR-511 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-145 View Gene Set 5.161e-16 449 2.912e-15 98 microRNA targets for hsa-miR-145 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-500 View Gene Set 8.968e-16 378 5.009e-15 99 microRNA targets for hsa-miR-500 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-337-3p View Gene Set 9.156e-16 231 5.063e-15 100 microRNA targets for hsa-miR-337-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-27a View Gene Set 1.041e-15 518 5.697e-15 101 microRNA targets for hsa-miR-27a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-889 View Gene Set 1.273e-15 370 6.903e-15 102 microRNA targets for hsa-miR-889 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-519c-3p View Gene Set 1.354e-15 493 7.27e-15 103 microRNA targets for hsa-miR-519c-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-382 View Gene Set 3.475e-15 355 1.848e-14 104 microRNA targets for hsa-miR-382 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-27b View Gene Set 4.019e-15 528 2.116e-14 105 microRNA targets for hsa-miR-27b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-216b View Gene Set 6.992e-15 392 3.648e-14 106 microRNA targets for hsa-miR-216b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-768-3p View Gene Set 1.679e-14 333 8.679e-14 107 microRNA targets for hsa-miR-768-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-569 View Gene Set 2.066e-14 276 1.058e-13 108 microRNA targets for hsa-miR-569 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-633 View Gene Set 2.212e-14 303 1.122e-13 109 microRNA targets for hsa-miR-633 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-129-5p View Gene Set 3.221e-14 925 1.619e-13 110 microRNA targets for hsa-miR-129-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-302c View Gene Set 3.457e-14 370 1.722e-13 111 microRNA targets for hsa-miR-302c from mirtarget2.targets www.mirbase.org...
Null hsa-miR-549 View Gene Set 3.7e-14 200 1.827e-13 112 microRNA targets for hsa-miR-549 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-361-5p View Gene Set 4.455e-14 321 2.18e-13 113 microRNA targets for hsa-miR-361-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-515-5p View Gene Set 4.795e-14 396 2.326e-13 114 microRNA targets for hsa-miR-515-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-520f View Gene Set 8.148e-14 426 3.918e-13 115 microRNA targets for hsa-miR-520f from mirtarget2.targets www.mirbase.org...
Null hsa-miR-875-3p View Gene Set 9.593e-14 635 4.573e-13 116 microRNA targets for hsa-miR-875-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-509-5p View Gene Set 1.037e-13 365 4.859e-13 117 microRNA targets for hsa-miR-509-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-653 View Gene Set 1.034e-13 305 4.859e-13 117 microRNA targets for hsa-miR-653 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-520b View Gene Set 1.277e-13 451 5.934e-13 119 microRNA targets for hsa-miR-520b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-137 View Gene Set 1.559e-13 415 7.186e-13 120 microRNA targets for hsa-miR-137 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-139-5p View Gene Set 1.766e-13 286 8.073e-13 121 microRNA targets for hsa-miR-139-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-520c-3p View Gene Set 1.853e-13 452 8.401e-13 122 microRNA targets for hsa-miR-520c-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-194 View Gene Set 3.481e-13 291 1.565e-12 123 microRNA targets for hsa-miR-194 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-377 View Gene Set 4.732e-13 449 2.11e-12 124 microRNA targets for hsa-miR-377 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-140-5p View Gene Set 6.377e-13 248 2.821e-12 125 microRNA targets for hsa-miR-140-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-643 View Gene Set 7.417e-13 292 3.255e-12 126 microRNA targets for hsa-miR-643 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-302d View Gene Set 7.487e-13 418 3.26e-12 127 microRNA targets for hsa-miR-302d from mirtarget2.targets www.mirbase.org...
Null hsa-miR-520a-3p View Gene Set 8.661e-13 468 3.742e-12 128 microRNA targets for hsa-miR-520a-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-498 View Gene Set 9.409e-13 326 4.034e-12 129 microRNA targets for hsa-miR-498 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-217 View Gene Set 1.048e-12 365 4.459e-12 130 microRNA targets for hsa-miR-217 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-409-3p View Gene Set 1.249e-12 372 5.273e-12 131 microRNA targets for hsa-miR-409-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-34b View Gene Set 1.426e-12 350 5.974e-12 132 microRNA targets for hsa-miR-34b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-212 View Gene Set 2.079e-12 314 8.644e-12 133 microRNA targets for hsa-miR-212 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-520d-3p View Gene Set 2.096e-12 456 8.65e-12 134 microRNA targets for hsa-miR-520d-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-520e View Gene Set 2.229e-12 443 9.131e-12 135 microRNA targets for hsa-miR-520e from mirtarget2.targets www.mirbase.org...
Null hsa-miR-509-3-5p View Gene Set 2.278e-12 344 9.261e-12 136 microRNA targets for hsa-miR-509-3-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-544 View Gene Set 2.463e-12 484 9.941e-12 137 microRNA targets for hsa-miR-544 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-302a View Gene Set 2.84e-12 382 1.138e-11 138 microRNA targets for hsa-miR-302a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-224 View Gene Set 3.279e-12 370 1.305e-11 139 microRNA targets for hsa-miR-224 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-211 View Gene Set 3.572e-12 549 1.411e-11 140 microRNA targets for hsa-miR-211 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-206 View Gene Set 6.238e-12 358 2.447e-11 141 microRNA targets for hsa-miR-206 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-487a View Gene Set 6.333e-12 267 2.466e-11 142 microRNA targets for hsa-miR-487a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-204 View Gene Set 7.736e-12 538 2.992e-11 143 microRNA targets for hsa-miR-204 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-496 View Gene Set 8.087e-12 225 3.106e-11 144 microRNA targets for hsa-miR-496 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-630 View Gene Set 1.067e-11 248 4.071e-11 145 microRNA targets for hsa-miR-630 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-373 View Gene Set 1.328e-11 404 5.029e-11 146 microRNA targets for hsa-miR-373 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-499-3p View Gene Set 1.392e-11 327 5.235e-11 147 microRNA targets for hsa-miR-499-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-567 View Gene Set 1.754e-11 278 6.555e-11 148 microRNA targets for hsa-miR-567 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-222 View Gene Set 1.874e-11 243 6.956e-11 149 microRNA targets for hsa-miR-222 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-421 View Gene Set 2.135e-11 334 7.872e-11 150 microRNA targets for hsa-miR-421 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-371-5p View Gene Set 2.3e-11 354 8.424e-11 151 microRNA targets for hsa-miR-371-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-297 View Gene Set 2.369e-11 385 8.618e-11 152 microRNA targets for hsa-miR-297 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-132 View Gene Set 3.026e-11 296 1.092e-10 153 microRNA targets for hsa-miR-132 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-216a View Gene Set 3.04e-11 352 1.092e-10 153 microRNA targets for hsa-miR-216a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-499-5p View Gene Set 3.476e-11 307 1.24e-10 155 microRNA targets for hsa-miR-499-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-485-3p View Gene Set 3.62e-11 370 1.283e-10 156 microRNA targets for hsa-miR-485-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-302b View Gene Set 3.714e-11 406 1.308e-10 157 microRNA targets for hsa-miR-302b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-363 View Gene Set 3.838e-11 365 1.343e-10 158 microRNA targets for hsa-miR-363 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-605 View Gene Set 4.151e-11 294 1.444e-10 159 microRNA targets for hsa-miR-605 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-190b View Gene Set 4.664e-11 189 1.612e-10 160 microRNA targets for hsa-miR-190b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-891b View Gene Set 4.996e-11 245 1.716e-10 161 microRNA targets for hsa-miR-891b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-135a View Gene Set 5.965e-11 301 2.036e-10 162 microRNA targets for hsa-miR-135a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-221 View Gene Set 6.539e-11 264 2.218e-10 163 microRNA targets for hsa-miR-221 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-372 View Gene Set 7.777e-11 435 2.622e-10 164 microRNA targets for hsa-miR-372 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-425 View Gene Set 9.37e-11 237 3.14e-10 165 microRNA targets for hsa-miR-425 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-613 View Gene Set 1.179e-10 322 3.928e-10 166 microRNA targets for hsa-miR-613 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-223 View Gene Set 1.247e-10 220 4.131e-10 167 microRNA targets for hsa-miR-223 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-573 View Gene Set 1.389e-10 284 4.571e-10 168 microRNA targets for hsa-miR-573 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-9 View Gene Set 1.499e-10 423 4.906e-10 169 microRNA targets for hsa-miR-9 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-34c-3p View Gene Set 1.696e-10 230 5.518e-10 170 microRNA targets for hsa-miR-34c-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-148a View Gene Set 1.747e-10 325 5.651e-10 171 microRNA targets for hsa-miR-148a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-651 View Gene Set 2.168e-10 250 6.971e-10 172 microRNA targets for hsa-miR-651 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-885-5p View Gene Set 2.318e-10 167 7.41e-10 173 microRNA targets for hsa-miR-885-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-580 View Gene Set 2.537e-10 414 8.062e-10 174 microRNA targets for hsa-miR-580 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-646 View Gene Set 2.79e-10 365 8.818e-10 175 microRNA targets for hsa-miR-646 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-135b View Gene Set 3.098e-10 296 9.735e-10 176 microRNA targets for hsa-miR-135b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-584 View Gene Set 4.03e-10 278 1.259e-09 177 microRNA targets for hsa-miR-584 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-1 View Gene Set 5.631e-10 342 1.749e-09 178 microRNA targets for hsa-miR-1 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-532-5p View Gene Set 5.754e-10 279 1.777e-09 179 microRNA targets for hsa-miR-532-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-548b-3p View Gene Set 5.913e-10 264 1.817e-09 180 microRNA targets for hsa-miR-548b-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-892a View Gene Set 6.244e-10 352 1.908e-09 181 microRNA targets for hsa-miR-892a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-182 View Gene Set 6.285e-10 478 1.91e-09 182 microRNA targets for hsa-miR-182 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-219-2-3p View Gene Set 6.511e-10 256 1.967e-09 183 microRNA targets for hsa-miR-219-2-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-190 View Gene Set 7.012e-10 172 2.108e-09 184 microRNA targets for hsa-miR-190 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-367 View Gene Set 7.143e-10 388 2.135e-09 185 microRNA targets for hsa-miR-367 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-154 View Gene Set 7.499e-10 233 2.23e-09 186 microRNA targets for hsa-miR-154 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-148b View Gene Set 7.748e-10 329 2.291e-09 187 microRNA targets for hsa-miR-148b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-25 View Gene Set 8.093e-10 398 2.381e-09 188 microRNA targets for hsa-miR-25 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-514 View Gene Set 1.154e-09 191 3.376e-09 189 microRNA targets for hsa-miR-514 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-618 View Gene Set 1.242e-09 264 3.615e-09 190 microRNA targets for hsa-miR-618 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-152 View Gene Set 1.424e-09 337 4.123e-09 191 microRNA targets for hsa-miR-152 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-136 View Gene Set 1.481e-09 307 4.265e-09 192 microRNA targets for hsa-miR-136 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-32 View Gene Set 1.49e-09 373 4.27e-09 193 microRNA targets for hsa-miR-32 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-205 View Gene Set 1.818e-09 348 5.183e-09 194 microRNA targets for hsa-miR-205 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-92b View Gene Set 1.844e-09 367 5.229e-09 195 microRNA targets for hsa-miR-92b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-362-5p View Gene Set 1.979e-09 191 5.537e-09 196 microRNA targets for hsa-miR-362-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-518a-5p View Gene Set 1.982e-09 455 5.537e-09 196 microRNA targets for hsa-miR-518a-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-527 View Gene Set 1.982e-09 455 5.537e-09 196 microRNA targets for hsa-miR-527 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-624 View Gene Set 2.197e-09 253 6.105e-09 199 microRNA targets for hsa-miR-624 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-491-3p View Gene Set 2.597e-09 283 7.145e-09 200 microRNA targets for hsa-miR-491-3p from mirtarget2.targets www.mirbase.org...

Gene Set Collection: pictar.targets

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null hsa-miR-26b View Gene Set 2.319e-18 508 4.127e-16 1 microRNA targets for hsa-miR-26b from pictar.targets www.mirbase.org...
Null hsa-miR-26a View Gene Set 8.012e-18 501 7.131e-16 2 microRNA targets for hsa-miR-26a from pictar.targets www.mirbase.org...
Null hsa-miR-200b View Gene Set 1.746e-16 465 7.77e-15 3 microRNA targets for hsa-miR-200b from pictar.targets www.mirbase.org...
Null hsa-miR-200c View Gene Set 1.746e-16 465 7.77e-15 3 microRNA targets for hsa-miR-200c from pictar.targets www.mirbase.org...
Null hsa-miR-302c* View Gene Set 7.216e-16 371 2.569e-14 5 microRNA targets for hsa-miR-302c* from pictar.targets www.mirbase.org...
Null hsa-miR-199a* View Gene Set 1.922e-15 422 5.701e-14 6 microRNA targets for hsa-miR-199a* from pictar.targets www.mirbase.org...
Null hsa-miR-144 View Gene Set 2.912e-14 431 7.405e-13 7 microRNA targets for hsa-miR-144 from pictar.targets www.mirbase.org...
Null hsa-miR-101 View Gene Set 4.044e-14 428 8.997e-13 8 microRNA targets for hsa-miR-101 from pictar.targets www.mirbase.org...
Null hsa-miR-323 View Gene Set 1.062e-12 248 2.1e-11 9 microRNA targets for hsa-miR-323 from pictar.targets www.mirbase.org...
Null hsa-miR-141 View Gene Set 9.117e-12 332 1.623e-10 10 microRNA targets for hsa-miR-141 from pictar.targets www.mirbase.org...
Null hsa-miR-19a View Gene Set 6.987e-11 562 1.131e-09 11 microRNA targets for hsa-miR-19a from pictar.targets www.mirbase.org...
Null hsa-miR-9* View Gene Set 8.231e-11 306 1.221e-09 12 microRNA targets for hsa-miR-9* from pictar.targets www.mirbase.org...
Null hsa-miR-23b View Gene Set 1.13e-10 420 1.547e-09 13 microRNA targets for hsa-miR-23b from pictar.targets www.mirbase.org...
Null hsa-miR-19b View Gene Set 1.311e-10 558 1.667e-09 14 microRNA targets for hsa-miR-19b from pictar.targets www.mirbase.org...
Null hsa-miR-23a View Gene Set 1.417e-10 418 1.682e-09 15 microRNA targets for hsa-miR-23a from pictar.targets www.mirbase.org...
Null hsa-miR-369-3p View Gene Set 2.268e-10 335 2.523e-09 16 microRNA targets for hsa-miR-369-3p from pictar.targets www.mirbase.org...
Null hsa-miR-186 View Gene Set 3.135e-10 441 3.282e-09 17 microRNA targets for hsa-miR-186 from pictar.targets www.mirbase.org...
Null hsa-miR-30d View Gene Set 4.808e-10 701 4.755e-09 18 microRNA targets for hsa-miR-30d from pictar.targets www.mirbase.org...
Null hsa-miR-30b View Gene Set 6.683e-10 699 5.948e-09 19 microRNA targets for hsa-miR-30b from pictar.targets www.mirbase.org...
Null hsa-miR-30c View Gene Set 6.683e-10 699 5.948e-09 19 microRNA targets for hsa-miR-30c from pictar.targets www.mirbase.org...
Null hsa-miR-30a-5p View Gene Set 9.12e-10 700 7.73e-09 21 microRNA targets for hsa-miR-30a-5p from pictar.targets www.mirbase.org...
Null hsa-miR-302b* View Gene Set 1.024e-09 253 8.284e-09 22 microRNA targets for hsa-miR-302b* from pictar.targets www.mirbase.org...
Null hsa-miR-30e-5p View Gene Set 1.363e-09 705 1.055e-08 23 microRNA targets for hsa-miR-30e-5p from pictar.targets www.mirbase.org...
Null hsa-miR-320 View Gene Set 3.424e-09 405 2.539e-08 24 microRNA targets for hsa-miR-320 from pictar.targets www.mirbase.org...
Null hsa-miR-20b View Gene Set 3.948e-09 601 2.811e-08 25 microRNA targets for hsa-miR-20b from pictar.targets www.mirbase.org...
Null hsa-miR-181a View Gene Set 5.07e-09 500 3.471e-08 26 microRNA targets for hsa-miR-181a from pictar.targets www.mirbase.org...
Null hsa-miR-181c View Gene Set 6.03e-09 499 3.975e-08 27 microRNA targets for hsa-miR-181c from pictar.targets www.mirbase.org...
Null hsa-miR-181b View Gene Set 9.91e-09 500 6.3e-08 28 microRNA targets for hsa-miR-181b from pictar.targets www.mirbase.org...
Null hsa-miR-203 View Gene Set 1.075e-08 329 6.6e-08 29 microRNA targets for hsa-miR-203 from pictar.targets www.mirbase.org...
Null hsa-miR-17-5p View Gene Set 1.505e-08 602 8.93e-08 30 microRNA targets for hsa-miR-17-5p from pictar.targets www.mirbase.org...
Null hsa-miR-375 View Gene Set 2.586e-08 166 1.485e-07 31 microRNA targets for hsa-miR-375 from pictar.targets www.mirbase.org...
Null hsa-miR-217 View Gene Set 4.309e-08 164 2.397e-07 32 microRNA targets for hsa-miR-217 from pictar.targets www.mirbase.org...
Null hsa-miR-32 View Gene Set 4.515e-08 444 2.418e-07 33 microRNA targets for hsa-miR-32 from pictar.targets www.mirbase.org...
Null hsa-miR-372 View Gene Set 4.618e-08 608 2.418e-07 33 microRNA targets for hsa-miR-372 from pictar.targets www.mirbase.org...
Null hsa-miR-142-5p View Gene Set 5.23e-08 308 2.66e-07 35 microRNA targets for hsa-miR-142-5p from pictar.targets www.mirbase.org...
Null hsa-miR-302a View Gene Set 6.456e-08 374 3.192e-07 36 microRNA targets for hsa-miR-302a from pictar.targets www.mirbase.org...
Null hsa-miR-106b View Gene Set 7.152e-08 613 3.441e-07 37 microRNA targets for hsa-miR-106b from pictar.targets www.mirbase.org...
Null hsa-miR-20a View Gene Set 8.07e-08 611 3.78e-07 38 microRNA targets for hsa-miR-20a from pictar.targets www.mirbase.org...
Null hsa-miR-196a View Gene Set 9.623e-08 143 4.392e-07 39 microRNA targets for hsa-miR-196a from pictar.targets www.mirbase.org...
Null hsa-miR-124a View Gene Set 1.195e-07 624 5.317e-07 40 microRNA targets for hsa-miR-124a from pictar.targets www.mirbase.org...
Null hsa-miR-302d View Gene Set 1.291e-07 375 5.604e-07 41 microRNA targets for hsa-miR-302d from pictar.targets www.mirbase.org...
Null hsa-miR-92 View Gene Set 1.581e-07 438 6.702e-07 42 microRNA targets for hsa-miR-92 from pictar.targets www.mirbase.org...
Null hsa-miR-93 View Gene Set 2.545e-07 606 1.054e-06 43 microRNA targets for hsa-miR-93 from pictar.targets www.mirbase.org...
Null hsa-miR-18b View Gene Set 2.661e-07 134 1.077e-06 44 microRNA targets for hsa-miR-18b from pictar.targets www.mirbase.org...
Null hsa-miR-129 View Gene Set 3.195e-07 207 1.264e-06 45 microRNA targets for hsa-miR-129 from pictar.targets www.mirbase.org...
Null hsa-miR-142-3p View Gene Set 3.818e-07 166 1.477e-06 46 microRNA targets for hsa-miR-142-3p from pictar.targets www.mirbase.org...
Null hsa-miR-18a View Gene Set 5.533e-07 133 2.095e-06 47 microRNA targets for hsa-miR-18a from pictar.targets www.mirbase.org...
Null hsa-miR-218 View Gene Set 7.088e-07 434 2.628e-06 48 microRNA targets for hsa-miR-218 from pictar.targets www.mirbase.org...
Null hsa-miR-302c View Gene Set 7.973e-07 355 2.896e-06 49 microRNA targets for hsa-miR-302c from pictar.targets www.mirbase.org...
Null hsa-miR-302b View Gene Set 1.217e-06 351 4.333e-06 50 microRNA targets for hsa-miR-302b from pictar.targets www.mirbase.org...
Null hsa-miR-145 View Gene Set 1.455e-06 245 5.08e-06 51 microRNA targets for hsa-miR-145 from pictar.targets www.mirbase.org...
Null hsa-miR-1 View Gene Set 1.884e-06 408 6.45e-06 52 microRNA targets for hsa-miR-1 from pictar.targets www.mirbase.org...
Null hsa-miR-130b View Gene Set 1.922e-06 497 6.456e-06 53 microRNA targets for hsa-miR-130b from pictar.targets www.mirbase.org...
Null hsa-miR-155 View Gene Set 2.049e-06 196 6.756e-06 54 microRNA targets for hsa-miR-155 from pictar.targets www.mirbase.org...
Null hsa-miR-33 View Gene Set 2.164e-06 255 7.004e-06 55 microRNA targets for hsa-miR-33 from pictar.targets www.mirbase.org...
Null hsa-miR-206 View Gene Set 2.23e-06 404 7.088e-06 56 microRNA targets for hsa-miR-206 from pictar.targets www.mirbase.org...
Null hsa-miR-152 View Gene Set 2.314e-06 344 7.228e-06 57 microRNA targets for hsa-miR-152 from pictar.targets www.mirbase.org...
Null hsa-miR-148b View Gene Set 2.557e-06 341 7.848e-06 58 microRNA targets for hsa-miR-148b from pictar.targets www.mirbase.org...
Null hsa-miR-301 View Gene Set 2.749e-06 492 8.293e-06 59 microRNA targets for hsa-miR-301 from pictar.targets www.mirbase.org...
Null hsa-miR-148a View Gene Set 3.407e-06 342 1.011e-05 60 microRNA targets for hsa-miR-148a from pictar.targets www.mirbase.org...
Null hsa-miR-130a View Gene Set 5.288e-06 517 1.543e-05 61 microRNA targets for hsa-miR-130a from pictar.targets www.mirbase.org...
Null hsa-miR-25 View Gene Set 5.819e-06 311 1.671e-05 62 microRNA targets for hsa-miR-25 from pictar.targets www.mirbase.org...
Null hsa-miR-219 View Gene Set 8.379e-06 188 2.367e-05 63 microRNA targets for hsa-miR-219 from pictar.targets www.mirbase.org...
Null hsa-miR-194 View Gene Set 9.421e-06 200 2.62e-05 64 microRNA targets for hsa-miR-194 from pictar.targets www.mirbase.org...
Null hsa-miR-196b View Gene Set 9.956e-06 138 2.726e-05 65 microRNA targets for hsa-miR-196b from pictar.targets www.mirbase.org...
Null hsa-miR-27b View Gene Set 1.21e-05 629 3.263e-05 66 microRNA targets for hsa-miR-27b from pictar.targets www.mirbase.org...
Null hsa-miR-9 View Gene Set 1.275e-05 670 3.387e-05 67 microRNA targets for hsa-miR-9 from pictar.targets www.mirbase.org...
Null hsa-miR-21 View Gene Set 1.389e-05 146 3.636e-05 68 microRNA targets for hsa-miR-21 from pictar.targets www.mirbase.org...
Null hsa-miR-367 View Gene Set 2.885e-05 335 7.441e-05 69 microRNA targets for hsa-miR-367 from pictar.targets www.mirbase.org...
Null hsa-miR-27a View Gene Set 3.408e-05 620 8.666e-05 70 microRNA targets for hsa-miR-27a from pictar.targets www.mirbase.org...
Null hsa-miR-200a View Gene Set 6.376e-05 107 0.0001599 71 microRNA targets for hsa-miR-200a from pictar.targets www.mirbase.org...
Null hsa-miR-330 View Gene Set 6.689e-05 352 0.0001654 72 microRNA targets for hsa-miR-330 from pictar.targets www.mirbase.org...
Null hsa-miR-30a-3p View Gene Set 7.889e-05 230 0.0001924 73 microRNA targets for hsa-miR-30a-3p from pictar.targets www.mirbase.org...
Null hsa-miR-126* View Gene Set 8.36e-05 288 0.0002011 74 microRNA targets for hsa-miR-126* from pictar.targets www.mirbase.org...
Null hsa-miR-211 View Gene Set 0.0001017 320 0.0002413 75 microRNA targets for hsa-miR-211 from pictar.targets www.mirbase.org...
Null hsa-miR-30e-3p View Gene Set 0.0001201 230 0.0002814 76 microRNA targets for hsa-miR-30e-3p from pictar.targets www.mirbase.org...
Null hsa-miR-216 View Gene Set 0.0001304 121 0.0003014 77 microRNA targets for hsa-miR-216 from pictar.targets www.mirbase.org...
Null hsa-miR-212 View Gene Set 0.0001332 210 0.0003039 78 microRNA targets for hsa-miR-212 from pictar.targets www.mirbase.org...
Null hsa-miR-132 View Gene Set 0.0001356 210 0.0003056 79 microRNA targets for hsa-miR-132 from pictar.targets www.mirbase.org...
Null hsa-miR-335 View Gene Set 0.0001572 136 0.0003497 80 microRNA targets for hsa-miR-335 from pictar.targets www.mirbase.org...
Null hsa-miR-153 View Gene Set 0.0001599 376 0.0003513 81 microRNA targets for hsa-miR-153 from pictar.targets www.mirbase.org...
Null hsa-miR-182* View Gene Set 0.0001697 126 0.0003684 82 microRNA targets for hsa-miR-182* from pictar.targets www.mirbase.org...
Null hsa-miR-223 View Gene Set 0.0001888 136 0.000405 83 microRNA targets for hsa-miR-223 from pictar.targets www.mirbase.org...
Null hsa-miR-143 View Gene Set 0.0002057 177 0.0004359 84 microRNA targets for hsa-miR-143 from pictar.targets www.mirbase.org...
Null hsa-miR-137 View Gene Set 0.0002185 375 0.0004576 85 microRNA targets for hsa-miR-137 from pictar.targets www.mirbase.org...
Null hsa-miR-205 View Gene Set 0.000247 237 0.0005113 86 microRNA targets for hsa-miR-205 from pictar.targets www.mirbase.org...
Null hsa-miR-204 View Gene Set 0.0002801 315 0.000573 87 microRNA targets for hsa-miR-204 from pictar.targets www.mirbase.org...
Null hsa-miR-208 View Gene Set 0.0002999 52 0.0006067 88 microRNA targets for hsa-miR-208 from pictar.targets www.mirbase.org...
Null hsa-miR-302a* View Gene Set 0.0003164 37 0.0006329 89 microRNA targets for hsa-miR-302a* from pictar.targets www.mirbase.org...
Null hsa-miR-221 View Gene Set 0.0004994 225 0.0009877 90 microRNA targets for hsa-miR-221 from pictar.targets www.mirbase.org...
Null hsa-miR-139 View Gene Set 0.0006155 223 0.001204 91 microRNA targets for hsa-miR-139 from pictar.targets www.mirbase.org...
Null hsa-miR-140 View Gene Set 0.000641 196 0.00124 92 microRNA targets for hsa-miR-140 from pictar.targets www.mirbase.org...
Null hsa-miR-222 View Gene Set 0.0007667 218 0.001467 93 microRNA targets for hsa-miR-222 from pictar.targets www.mirbase.org...
Null hsa-miR-182 View Gene Set 0.0007848 552 0.001486 94 microRNA targets for hsa-miR-182 from pictar.targets www.mirbase.org...
Null hsa-miR-190 View Gene Set 0.0007993 90 0.001498 95 microRNA targets for hsa-miR-190 from pictar.targets www.mirbase.org...
Null hsa-miR-183 View Gene Set 0.001156 233 0.002143 96 microRNA targets for hsa-miR-183 from pictar.targets www.mirbase.org...
Null hsa-miR-16 View Gene Set 0.001396 610 0.002561 97 microRNA targets for hsa-miR-16 from pictar.targets www.mirbase.org...
Null hsa-miR-195 View Gene Set 0.001424 620 0.002587 98 microRNA targets for hsa-miR-195 from pictar.targets www.mirbase.org...
Null hsa-miR-15a View Gene Set 0.001744 618 0.003136 99 microRNA targets for hsa-miR-15a from pictar.targets www.mirbase.org...
Null hsa-miR-15b View Gene Set 0.001886 626 0.003358 100 microRNA targets for hsa-miR-15b from pictar.targets www.mirbase.org...
Null hsa-miR-299-5p View Gene Set 0.002001 163 0.003485 101 microRNA targets for hsa-miR-299-5p from pictar.targets www.mirbase.org...
Null hsa-miR-340 View Gene Set 0.001983 6 0.003485 101 microRNA targets for hsa-miR-340 from pictar.targets www.mirbase.org...
Null hsa-miR-96 View Gene Set 0.002017 595 0.003485 101 microRNA targets for hsa-miR-96 from pictar.targets www.mirbase.org...
Null hsa-miR-368 View Gene Set 0.002898 103 0.004961 104 microRNA targets for hsa-miR-368 from pictar.targets www.mirbase.org...
Null hsa-miR-342 View Gene Set 0.005868 126 0.009948 105 microRNA targets for hsa-miR-342 from pictar.targets www.mirbase.org...
Null hsa-let-7f View Gene Set 0.007554 545 0.01268 106 microRNA targets for hsa-let-7f from pictar.targets www.mirbase.org...
Null hsa-let-7b View Gene Set 0.00778 573 0.01294 107 microRNA targets for hsa-let-7b from pictar.targets www.mirbase.org...
Null hsa-miR-98 View Gene Set 0.007988 543 0.01317 108 microRNA targets for hsa-miR-98 from pictar.targets www.mirbase.org...
Null hsa-let-7g View Gene Set 0.008368 556 0.01367 109 microRNA targets for hsa-let-7g from pictar.targets www.mirbase.org...
Null hsa-let-7e View Gene Set 0.008535 555 0.01377 110 microRNA targets for hsa-let-7e from pictar.targets www.mirbase.org...
Null hsa-miR-134 View Gene Set 0.008589 86 0.01377 110 microRNA targets for hsa-miR-134 from pictar.targets www.mirbase.org...
Null hsa-miR-369-5p View Gene Set 0.009282 6 0.01475 112 microRNA targets for hsa-miR-369-5p from pictar.targets www.mirbase.org...
Null hsa-let-7a View Gene Set 0.01011 554 0.01592 113 microRNA targets for hsa-let-7a from pictar.targets www.mirbase.org...
Null hsa-miR-199b View Gene Set 0.0112 197 0.01749 114 microRNA targets for hsa-miR-199b from pictar.targets www.mirbase.org...
Null hsa-miR-128b View Gene Set 0.01314 532 0.02034 115 microRNA targets for hsa-miR-128b from pictar.targets www.mirbase.org...
Null hsa-miR-215 View Gene Set 0.01335 74 0.02049 116 microRNA targets for hsa-miR-215 from pictar.targets www.mirbase.org...
Null hsa-let-7i View Gene Set 0.01388 572 0.02089 117 microRNA targets for hsa-let-7i from pictar.targets www.mirbase.org...
Null hsa-miR-128a View Gene Set 0.01387 536 0.02089 117 microRNA targets for hsa-miR-128a from pictar.targets www.mirbase.org...
Null hsa-miR-151 View Gene Set 0.01397 36 0.02089 117 microRNA targets for hsa-miR-151 from pictar.targets www.mirbase.org...
Null hsa-let-7c View Gene Set 0.01802 560 0.02673 120 microRNA targets for hsa-let-7c from pictar.targets www.mirbase.org...
Null hsa-miR-22 View Gene Set 0.01909 265 0.02809 121 microRNA targets for hsa-miR-22 from pictar.targets www.mirbase.org...
Null hsa-miR-135a View Gene Set 0.01997 358 0.02914 122 microRNA targets for hsa-miR-135a from pictar.targets www.mirbase.org...
Null hsa-miR-103 View Gene Set 0.02323 606 0.03359 123 microRNA targets for hsa-miR-103 from pictar.targets www.mirbase.org...
Null hsa-miR-10b View Gene Set 0.0234 134 0.03359 123 microRNA targets for hsa-miR-10b from pictar.targets www.mirbase.org...
Null hsa-miR-107 View Gene Set 0.02475 613 0.03524 125 microRNA targets for hsa-miR-107 from pictar.targets www.mirbase.org...
Null hsa-miR-135b View Gene Set 0.02827 362 0.03993 126 microRNA targets for hsa-miR-135b from pictar.targets www.mirbase.org...
Null hsa-miR-10a View Gene Set 0.02925 134 0.041 127 microRNA targets for hsa-miR-10a from pictar.targets www.mirbase.org...
Null hsa-miR-7 View Gene Set 0.03196 268 0.04445 128 microRNA targets for hsa-miR-7 from pictar.targets www.mirbase.org...
Null hsa-miR-31 View Gene Set 0.03319 164 0.0458 129 microRNA targets for hsa-miR-31 from pictar.targets www.mirbase.org...

Gene Set Collection: tarbase.targets

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null hsa-miR-124 View Gene Set 9.53e-05 133 0.00486 1 microRNA targets for hsa-miR-124 from tarbase.targets www.mirbase.org...
Null hsa-miR-155 View Gene Set 0.0004609 95 0.008492 2 microRNA targets for hsa-miR-155 from tarbase.targets www.mirbase.org...
Null hsa-miR-373 View Gene Set 0.0004995 40 0.008492 2 microRNA targets for hsa-miR-373 from tarbase.targets www.mirbase.org...
Null hsa-miR-376a-5p View Gene Set 0.0007692 6 0.009807 4 microRNA targets for hsa-miR-376a-5p from tarbase.targets www.mirbase.org...
Null hsa-miR-30 View Gene Set 0.001508 83 0.01539 5 microRNA targets for hsa-miR-30 from tarbase.targets www.mirbase.org...
Null hsa-miR-1 View Gene Set 0.004736 149 0.04026 6 microRNA targets for hsa-miR-1 from tarbase.targets www.mirbase.org...

Gene Set Collection: targetscan.targets

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null hsa-miR-590-3p View Gene Set 8.976e-28 796 2.19e-25 1 microRNA targets for hsa-miR-590-3p from targetscan.targets www.mirbase.org...
Null hsa-miR-1297 View Gene Set 5.717e-23 646 3.487e-21 2 microRNA targets for hsa-miR-1297 from targetscan.targets www.mirbase.org...
Null hsa-miR-26a View Gene Set 5.717e-23 646 3.487e-21 2 microRNA targets for hsa-miR-26a from targetscan.targets www.mirbase.org...
Null hsa-miR-26b View Gene Set 5.717e-23 646 3.487e-21 2 microRNA targets for hsa-miR-26b from targetscan.targets www.mirbase.org...
Null hsa-miR-300 View Gene Set 9.745e-21 638 3.963e-19 5 microRNA targets for hsa-miR-300 from targetscan.targets www.mirbase.org...
Null hsa-miR-381 View Gene Set 9.745e-21 638 3.963e-19 5 microRNA targets for hsa-miR-381 from targetscan.targets www.mirbase.org...
Null hsa-miR-30a View Gene Set 9.583e-19 1080 2.126e-17 7 microRNA targets for hsa-miR-30a from targetscan.targets www.mirbase.org...
Null hsa-miR-30b View Gene Set 9.583e-19 1080 2.126e-17 7 microRNA targets for hsa-miR-30b from targetscan.targets www.mirbase.org...
Null hsa-miR-30c View Gene Set 9.583e-19 1080 2.126e-17 7 microRNA targets for hsa-miR-30c from targetscan.targets www.mirbase.org...
Null hsa-miR-30d View Gene Set 9.583e-19 1080 2.126e-17 7 microRNA targets for hsa-miR-30d from targetscan.targets www.mirbase.org...
Null hsa-miR-30e View Gene Set 9.583e-19 1080 2.126e-17 7 microRNA targets for hsa-miR-30e from targetscan.targets www.mirbase.org...
Null hsa-miR-19a View Gene Set 4.035e-18 937 7.574e-17 12 microRNA targets for hsa-miR-19a from targetscan.targets www.mirbase.org...
Null hsa-miR-19b View Gene Set 4.035e-18 937 7.574e-17 12 microRNA targets for hsa-miR-19b from targetscan.targets www.mirbase.org...
Null hsa-miR-340 View Gene Set 6.069e-18 963 1.058e-16 14 microRNA targets for hsa-miR-340 from targetscan.targets www.mirbase.org...
Null hsa-miR-181a View Gene Set 8.143e-15 893 9.935e-14 15 microRNA targets for hsa-miR-181a from targetscan.targets www.mirbase.org...
Null hsa-miR-181b View Gene Set 8.143e-15 893 9.935e-14 15 microRNA targets for hsa-miR-181b from targetscan.targets www.mirbase.org...
Null hsa-miR-181c View Gene Set 8.143e-15 893 9.935e-14 15 microRNA targets for hsa-miR-181c from targetscan.targets www.mirbase.org...
Null hsa-miR-181d View Gene Set 8.143e-15 893 9.935e-14 15 microRNA targets for hsa-miR-181d from targetscan.targets www.mirbase.org...
Null hsa-miR-23a View Gene Set 8.132e-15 838 9.935e-14 15 microRNA targets for hsa-miR-23a from targetscan.targets www.mirbase.org...
Null hsa-miR-23b View Gene Set 8.132e-15 838 9.935e-14 15 microRNA targets for hsa-miR-23b from targetscan.targets www.mirbase.org...
Null hsa-miR-101 View Gene Set 6.036e-14 607 7.013e-13 21 microRNA targets for hsa-miR-101 from targetscan.targets www.mirbase.org...
Null hsa-miR-144 View Gene Set 7.958e-13 647 8.826e-12 22 microRNA targets for hsa-miR-144 from targetscan.targets www.mirbase.org...
Null hsa-miR-186 View Gene Set 1.152e-12 525 1.222e-11 23 microRNA targets for hsa-miR-186 from targetscan.targets www.mirbase.org...
Null hsa-miR-130a View Gene Set 3.661e-12 722 3.19e-11 24 microRNA targets for hsa-miR-130a from targetscan.targets www.mirbase.org...
Null hsa-miR-130b View Gene Set 3.661e-12 722 3.19e-11 24 microRNA targets for hsa-miR-130b from targetscan.targets www.mirbase.org...
Null hsa-miR-301a View Gene Set 3.661e-12 722 3.19e-11 24 microRNA targets for hsa-miR-301a from targetscan.targets www.mirbase.org...
Null hsa-miR-301b View Gene Set 3.661e-12 722 3.19e-11 24 microRNA targets for hsa-miR-301b from targetscan.targets www.mirbase.org...
Null hsa-miR-454 View Gene Set 3.661e-12 722 3.19e-11 24 microRNA targets for hsa-miR-454 from targetscan.targets www.mirbase.org...
Null hsa-miR-217 View Gene Set 4.375e-12 237 3.235e-11 29 microRNA targets for hsa-miR-217 from targetscan.targets www.mirbase.org...
Null hsa-miR-320a View Gene Set 4.268e-12 539 3.235e-11 29 microRNA targets for hsa-miR-320a from targetscan.targets www.mirbase.org...
Null hsa-miR-320b View Gene Set 4.268e-12 539 3.235e-11 29 microRNA targets for hsa-miR-320b from targetscan.targets www.mirbase.org...
Null hsa-miR-320c View Gene Set 4.268e-12 539 3.235e-11 29 microRNA targets for hsa-miR-320c from targetscan.targets www.mirbase.org...
Null hsa-miR-320d View Gene Set 4.268e-12 539 3.235e-11 29 microRNA targets for hsa-miR-320d from targetscan.targets www.mirbase.org...
Null hsa-miR-203 View Gene Set 2.601e-11 558 1.867e-10 34 microRNA targets for hsa-miR-203 from targetscan.targets www.mirbase.org...
Null hsa-miR-145 View Gene Set 3.878e-11 526 2.704e-10 35 microRNA targets for hsa-miR-145 from targetscan.targets www.mirbase.org...
Null hsa-miR-494 View Gene Set 4.593e-11 360 3.113e-10 36 microRNA targets for hsa-miR-494 from targetscan.targets www.mirbase.org...
Null hsa-miR-543 View Gene Set 1.109e-10 497 7.314e-10 37 microRNA targets for hsa-miR-543 from targetscan.targets www.mirbase.org...
Null hsa-miR-106a View Gene Set 2.634e-10 986 1.461e-09 38 microRNA targets for hsa-miR-106a from targetscan.targets www.mirbase.org...
Null hsa-miR-106b View Gene Set 2.634e-10 986 1.461e-09 38 microRNA targets for hsa-miR-106b from targetscan.targets www.mirbase.org...
Null hsa-miR-17 View Gene Set 2.634e-10 986 1.461e-09 38 microRNA targets for hsa-miR-17 from targetscan.targets www.mirbase.org...
Null hsa-miR-20a View Gene Set 2.634e-10 986 1.461e-09 38 microRNA targets for hsa-miR-20a from targetscan.targets www.mirbase.org...
Null hsa-miR-20b View Gene Set 2.634e-10 986 1.461e-09 38 microRNA targets for hsa-miR-20b from targetscan.targets www.mirbase.org...
Null hsa-miR-519d View Gene Set 2.634e-10 986 1.461e-09 38 microRNA targets for hsa-miR-519d from targetscan.targets www.mirbase.org...
Null hsa-miR-93 View Gene Set 2.634e-10 986 1.461e-09 38 microRNA targets for hsa-miR-93 from targetscan.targets www.mirbase.org...
Null hsa-miR-25 View Gene Set 1.429e-09 692 6.973e-09 45 microRNA targets for hsa-miR-25 from targetscan.targets www.mirbase.org...
Null hsa-miR-32 View Gene Set 1.429e-09 692 6.973e-09 45 microRNA targets for hsa-miR-32 from targetscan.targets www.mirbase.org...
Null hsa-miR-363 View Gene Set 1.429e-09 692 6.973e-09 45 microRNA targets for hsa-miR-363 from targetscan.targets www.mirbase.org...
Null hsa-miR-367 View Gene Set 1.429e-09 692 6.973e-09 45 microRNA targets for hsa-miR-367 from targetscan.targets www.mirbase.org...
Null hsa-miR-92a View Gene Set 1.429e-09 692 6.973e-09 45 microRNA targets for hsa-miR-92a from targetscan.targets www.mirbase.org...
Null hsa-miR-92b View Gene Set 1.429e-09 692 6.973e-09 45 microRNA targets for hsa-miR-92b from targetscan.targets www.mirbase.org...
Null hsa-miR-124 View Gene Set 4.779e-09 1299 2.243e-08 51 microRNA targets for hsa-miR-124 from targetscan.targets www.mirbase.org...
Null hsa-miR-506 View Gene Set 4.779e-09 1299 2.243e-08 51 microRNA targets for hsa-miR-506 from targetscan.targets www.mirbase.org...
Null hsa-miR-148a View Gene Set 5.091e-09 536 2.259e-08 53 microRNA targets for hsa-miR-148a from targetscan.targets www.mirbase.org...
Null hsa-miR-148b View Gene Set 5.091e-09 536 2.259e-08 53 microRNA targets for hsa-miR-148b from targetscan.targets www.mirbase.org...
Null hsa-miR-152 View Gene Set 5.091e-09 536 2.259e-08 53 microRNA targets for hsa-miR-152 from targetscan.targets www.mirbase.org...
Null hsa-miR-374a View Gene Set 1.165e-08 458 4.987e-08 56 microRNA targets for hsa-miR-374a from targetscan.targets www.mirbase.org...
Null hsa-miR-374b View Gene Set 1.165e-08 458 4.987e-08 56 microRNA targets for hsa-miR-374b from targetscan.targets www.mirbase.org...
Null hsa-miR-495 View Gene Set 1.71e-08 570 7.193e-08 58 microRNA targets for hsa-miR-495 from targetscan.targets www.mirbase.org...
Null hsa-miR-433 View Gene Set 1.978e-08 207 8.181e-08 59 microRNA targets for hsa-miR-433 from targetscan.targets www.mirbase.org...
Null hsa-miR-140-5p View Gene Set 2.142e-08 251 8.712e-08 60 microRNA targets for hsa-miR-140-5p from targetscan.targets www.mirbase.org...
Null hsa-miR-199a-5p View Gene Set 6.105e-08 375 2.403e-07 61 microRNA targets for hsa-miR-199a-5p from targetscan.targets www.mirbase.org...
Null hsa-miR-199b-5p View Gene Set 6.105e-08 375 2.403e-07 61 microRNA targets for hsa-miR-199b-5p from targetscan.targets www.mirbase.org...
Null hsa-miR-223 View Gene Set 7.657e-08 202 2.966e-07 63 microRNA targets for hsa-miR-223 from targetscan.targets www.mirbase.org...
Null hsa-miR-302a View Gene Set 1.113e-07 605 3.574e-07 64 microRNA targets for hsa-miR-302a from targetscan.targets www.mirbase.org...
Null hsa-miR-302b View Gene Set 1.113e-07 605 3.574e-07 64 microRNA targets for hsa-miR-302b from targetscan.targets www.mirbase.org...
Null hsa-miR-302c View Gene Set 1.113e-07 605 3.574e-07 64 microRNA targets for hsa-miR-302c from targetscan.targets www.mirbase.org...
Null hsa-miR-302d View Gene Set 1.113e-07 605 3.574e-07 64 microRNA targets for hsa-miR-302d from targetscan.targets www.mirbase.org...
Null hsa-miR-302e View Gene Set 1.113e-07 605 3.574e-07 64 microRNA targets for hsa-miR-302e from targetscan.targets www.mirbase.org...
Null hsa-miR-372 View Gene Set 1.113e-07 605 3.574e-07 64 microRNA targets for hsa-miR-372 from targetscan.targets www.mirbase.org...
Null hsa-miR-373 View Gene Set 1.113e-07 605 3.574e-07 64 microRNA targets for hsa-miR-373 from targetscan.targets www.mirbase.org...
Null hsa-miR-520a-3p View Gene Set 1.113e-07 605 3.574e-07 64 microRNA targets for hsa-miR-520a-3p from targetscan.targets www.mirbase.org...
Null hsa-miR-520b View Gene Set 1.113e-07 605 3.574e-07 64 microRNA targets for hsa-miR-520b from targetscan.targets www.mirbase.org...
Null hsa-miR-520c-3p View Gene Set 1.113e-07 605 3.574e-07 64 microRNA targets for hsa-miR-520c-3p from targetscan.targets www.mirbase.org...
Null hsa-miR-520d-3p View Gene Set 1.113e-07 605 3.574e-07 64 microRNA targets for hsa-miR-520d-3p from targetscan.targets www.mirbase.org...
Null hsa-miR-520e View Gene Set 1.113e-07 605 3.574e-07 64 microRNA targets for hsa-miR-520e from targetscan.targets www.mirbase.org...
Null hsa-miR-544 View Gene Set 9.421e-08 346 3.574e-07 64 microRNA targets for hsa-miR-544 from targetscan.targets www.mirbase.org...
Null hsa-miR-9 View Gene Set 1.139e-07 936 3.608e-07 77 microRNA targets for hsa-miR-9 from targetscan.targets www.mirbase.org...
Null hsa-miR-1 View Gene Set 1.564e-07 583 4.771e-07 78 microRNA targets for hsa-miR-1 from targetscan.targets www.mirbase.org...
Null hsa-miR-206 View Gene Set 1.564e-07 583 4.771e-07 78 microRNA targets for hsa-miR-206 from targetscan.targets www.mirbase.org...
Null hsa-miR-613 View Gene Set 1.564e-07 583 4.771e-07 78 microRNA targets for hsa-miR-613 from targetscan.targets www.mirbase.org...
Null hsa-miR-182 View Gene Set 1.764e-07 841 5.314e-07 81 microRNA targets for hsa-miR-182 from targetscan.targets www.mirbase.org...
Null hsa-miR-224 View Gene Set 2.001e-07 236 5.813e-07 82 microRNA targets for hsa-miR-224 from targetscan.targets www.mirbase.org...
Null hsa-miR-27a View Gene Set 1.998e-07 921 5.813e-07 82 microRNA targets for hsa-miR-27a from targetscan.targets www.mirbase.org...
Null hsa-miR-27b View Gene Set 1.998e-07 921 5.813e-07 82 microRNA targets for hsa-miR-27b from targetscan.targets www.mirbase.org...
Null hsa-miR-539 View Gene Set 3.072e-07 433 8.819e-07 85 microRNA targets for hsa-miR-539 from targetscan.targets www.mirbase.org...
Null hsa-miR-183 View Gene Set 4.088e-07 295 1.16e-06 86 microRNA targets for hsa-miR-183 from targetscan.targets www.mirbase.org...
Null hsa-miR-194 View Gene Set 4.25e-07 258 1.192e-06 87 microRNA targets for hsa-miR-194 from targetscan.targets www.mirbase.org...
Null hsa-miR-139-5p View Gene Set 8.251e-07 248 2.288e-06 88 microRNA targets for hsa-miR-139-5p from targetscan.targets www.mirbase.org...
Null hsa-miR-137 View Gene Set 1.585e-06 857 4.346e-06 89 microRNA targets for hsa-miR-137 from targetscan.targets www.mirbase.org...
Null hsa-miR-142-3p View Gene Set 2.634e-06 250 7.141e-06 90 microRNA targets for hsa-miR-142-3p from targetscan.targets www.mirbase.org...
Null hsa-miR-371-5p View Gene Set 3.842e-06 199 1.03e-05 91 microRNA targets for hsa-miR-371-5p from targetscan.targets www.mirbase.org...
Null hsa-miR-382 View Gene Set 4.591e-06 127 1.217e-05 92 microRNA targets for hsa-miR-382 from targetscan.targets www.mirbase.org...
Null hsa-miR-221 View Gene Set 6.598e-06 306 1.713e-05 93 microRNA targets for hsa-miR-221 from targetscan.targets www.mirbase.org...
Null hsa-miR-222 View Gene Set 6.598e-06 306 1.713e-05 93 microRNA targets for hsa-miR-222 from targetscan.targets www.mirbase.org...
Null hsa-miR-1271 View Gene Set 8.016e-06 787 2.037e-05 95 microRNA targets for hsa-miR-1271 from targetscan.targets www.mirbase.org...
Null hsa-miR-96 View Gene Set 8.016e-06 787 2.037e-05 95 microRNA targets for hsa-miR-96 from targetscan.targets www.mirbase.org...
Null hsa-miR-421 View Gene Set 3e-05 271 7.547e-05 97 microRNA targets for hsa-miR-421 from targetscan.targets www.mirbase.org...
Null hsa-miR-204 View Gene Set 3.918e-05 461 9.655e-05 98 microRNA targets for hsa-miR-204 from targetscan.targets www.mirbase.org...
Null hsa-miR-211 View Gene Set 3.918e-05 461 9.655e-05 98 microRNA targets for hsa-miR-211 from targetscan.targets www.mirbase.org...
Null hsa-miR-218 View Gene Set 4.259e-05 699 0.0001039 100 microRNA targets for hsa-miR-218 from targetscan.targets www.mirbase.org...
Null hsa-miR-103 View Gene Set 4.375e-05 472 0.0001047 101 microRNA targets for hsa-miR-103 from targetscan.targets www.mirbase.org...
Null hsa-miR-107 View Gene Set 4.375e-05 472 0.0001047 101 microRNA targets for hsa-miR-107 from targetscan.targets www.mirbase.org...
Null hsa-miR-219-5p View Gene Set 5.114e-05 273 0.0001212 103 microRNA targets for hsa-miR-219-5p from targetscan.targets www.mirbase.org...
Null hsa-miR-376a View Gene Set 6.236e-05 142 0.0001449 104 microRNA targets for hsa-miR-376a from targetscan.targets www.mirbase.org...
Null hsa-miR-376b View Gene Set 6.236e-05 142 0.0001449 104 microRNA targets for hsa-miR-376b from targetscan.targets www.mirbase.org...
Null hsa-miR-205 View Gene Set 7.015e-05 288 0.0001615 106 microRNA targets for hsa-miR-205 from targetscan.targets www.mirbase.org...
Null hsa-miR-33a View Gene Set 7.866e-05 264 0.0001777 107 microRNA targets for hsa-miR-33a from targetscan.targets www.mirbase.org...
Null hsa-miR-33b View Gene Set 7.866e-05 264 0.0001777 107 microRNA targets for hsa-miR-33b from targetscan.targets www.mirbase.org...
Null hsa-miR-448 View Gene Set 8.033e-05 522 0.0001798 109 microRNA targets for hsa-miR-448 from targetscan.targets www.mirbase.org...
Null hsa-miR-129-5p View Gene Set 8.425e-05 348 0.0001867 110 microRNA targets for hsa-miR-129-5p from targetscan.targets www.mirbase.org...
Null hsa-miR-361-5p View Gene Set 8.492e-05 138 0.0001867 110 microRNA targets for hsa-miR-361-5p from targetscan.targets www.mirbase.org...
Null hsa-miR-15a View Gene Set 0.000107 965 0.0002231 112 microRNA targets for hsa-miR-15a from targetscan.targets www.mirbase.org...
Null hsa-miR-15b View Gene Set 0.000107 965 0.0002231 112 microRNA targets for hsa-miR-15b from targetscan.targets www.mirbase.org...
Null hsa-miR-16 View Gene Set 0.000107 965 0.0002231 112 microRNA targets for hsa-miR-16 from targetscan.targets www.mirbase.org...
Null hsa-miR-195 View Gene Set 0.000107 965 0.0002231 112 microRNA targets for hsa-miR-195 from targetscan.targets www.mirbase.org...
Null hsa-miR-424 View Gene Set 0.000107 965 0.0002231 112 microRNA targets for hsa-miR-424 from targetscan.targets www.mirbase.org...
Null hsa-miR-497 View Gene Set 0.000107 965 0.0002231 112 microRNA targets for hsa-miR-497 from targetscan.targets www.mirbase.org...
Null hsa-miR-18a View Gene Set 0.0001137 189 0.0002332 118 microRNA targets for hsa-miR-18a from targetscan.targets www.mirbase.org...
Null hsa-miR-18b View Gene Set 0.0001137 189 0.0002332 118 microRNA targets for hsa-miR-18b from targetscan.targets www.mirbase.org...
Null hsa-miR-488 View Gene Set 0.0001307 216 0.0002657