Results

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Go to: Gene Set Collection: KEGG
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Go to: Gene Set Collection: Broad.c2.CP.BIOCARTA
Go to: Gene Set Collection: Broad.c2.CP.KEGG
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Go to: Gene Set Collection: Broad.c4.CM
Go to: Gene Set Collection: Broad.c5.BP
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Go to: Gene Set Collection: Broad.c5.MF
Go to: Gene Set Collection: PMID
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Go to: Gene Set Collection: pathwayCommons.nci-nature
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Go to: Gene Set Collection: miranda.targets
Go to: Gene Set Collection: mirbase.targets
Go to: Gene Set Collection: mirtarget2.targets
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Go to: Gene Set Collection: tfbsK3Z3

AFA results for: Buphenyl.ls

Click on the heading for any column to sort by that column.

Gene Set Collection: KEGG

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
KEGG 04080 View Gene Set 1.559e-16 272 3.337e-14 1 Neuroactive ligand-receptor interaction www.genome.jp/d...
KEGG 04514 View Gene Set 2.946e-11 135 3.153e-09 2 Cell adhesion molecules (CAMs) www.genome.jp/d...
KEGG 04020 View Gene Set 4.096e-09 178 2.922e-07 3 Calcium signaling pathway www.genome.jp/d...
KEGG 04640 View Gene Set 1.039e-08 88 5.559e-07 4 Hematopoietic cell lineage www.genome.jp/d...
KEGG 04650 View Gene Set 2.35e-06 137 8.383e-05 5 Natural killer cell mediated cytotoxicity www.genome.jp/d...
KEGG 05410 View Gene Set 2.302e-06 85 8.383e-05 5 Hypertrophic cardiomyopathy (HCM) www.genome.jp/d...
KEGG 04060 View Gene Set 5.582e-06 266 0.0001706 7 Cytokine-cytokine receptor interaction www.genome.jp/d...
KEGG 05414 View Gene Set 7.565e-06 92 0.0002024 8 Dilated cardiomyopathy www.genome.jp/d...
KEGG 05412 View Gene Set 1.084e-05 76 0.0002576 9 Arrhythmogenic right ventricular cardiomyopathy (ARVC) www.genome.jp/d...
KEGG 05332 View Gene Set 1.314e-05 43 0.0002811 10 Graft-versus-host disease www.genome.jp/d...
KEGG 04612 View Gene Set 2.999e-05 78 0.0005834 11 Antigen processing and presentation www.genome.jp/d...
KEGG 04510 View Gene Set 7.774e-05 201 0.001281 12 Focal adhesion www.genome.jp/d...
KEGG 04810 View Gene Set 8.075e-05 216 0.001281 12 Regulation of actin cytoskeleton www.genome.jp/d...
KEGG 05144 View Gene Set 8.38e-05 51 0.001281 12 Malaria www.genome.jp/d...
KEGG 04062 View Gene Set 0.0001196 189 0.001706 15 Chemokine signaling pathway www.genome.jp/d...
KEGG 04744 View Gene Set 0.0001372 29 0.001835 16 Phototransduction www.genome.jp/d...
KEGG 05340 View Gene Set 0.0001869 35 0.002353 17 Primary immunodeficiency www.genome.jp/d...
KEGG 05320 View Gene Set 0.0002153 54 0.00256 18 Autoimmune thyroid disease www.genome.jp/d...
KEGG 04512 View Gene Set 0.000269 84 0.002878 19 ECM-receptor interaction www.genome.jp/d...
KEGG 05330 View Gene Set 0.0002615 39 0.002878 19 Allograft rejection www.genome.jp/d...
KEGG 04670 View Gene Set 0.000303 118 0.003063 21 Leukocyte transendothelial migration www.genome.jp/d...
KEGG 04940 View Gene Set 0.0003149 45 0.003063 21 Type I diabetes mellitus www.genome.jp/d...
KEGG 00590 View Gene Set 0.0004515 58 0.004201 23 Arachidonic acid metabolism www.genome.jp/d...
KEGG 05310 View Gene Set 0.0005399 31 0.004814 24 Asthma www.genome.jp/d...
KEGG 04672 View Gene Set 0.000675 49 0.005778 25 Intestinal immune network for IgA production www.genome.jp/d...
KEGG 04970 View Gene Set 0.0008071 89 0.006643 26 Salivary secretion www.genome.jp/d...
KEGG 04360 View Gene Set 0.0008486 129 0.006726 27 Axon guidance www.genome.jp/d...
KEGG 04270 View Gene Set 0.0008844 116 0.006759 28 Vascular smooth muscle contraction www.genome.jp/d...
KEGG 04145 View Gene Set 0.0009203 158 0.006791 29 Phagosome www.genome.jp/d...
KEGG 05217 View Gene Set 0.001065 55 0.007598 30 Basal cell carcinoma www.genome.jp/d...
KEGG 05214 View Gene Set 0.001162 65 0.008018 31 Glioma www.genome.jp/d...
KEGG 00232 View Gene Set 0.002729 7 0.01747 32 Caffeine metabolism www.genome.jp/d...
KEGG 04971 View Gene Set 0.002775 74 0.01747 32 Gastric acid secretion www.genome.jp/d...
KEGG 05200 View Gene Set 0.002725 328 0.01747 32 Pathways in cancer www.genome.jp/d...
KEGG 04630 View Gene Set 0.003239 155 0.01925 35 Jak-STAT signaling pathway www.genome.jp/d...
KEGG 04912 View Gene Set 0.00321 101 0.01925 35 GnRH signaling pathway www.genome.jp/d...
KEGG 04930 View Gene Set 0.003958 47 0.02289 37 Type II diabetes mellitus www.genome.jp/d...
KEGG 04070 View Gene Set 0.004372 78 0.02462 38 Phosphatidylinositol signaling system www.genome.jp/d...
KEGG 04742 View Gene Set 0.004608 52 0.02528 39 Taste transduction www.genome.jp/d...
KEGG 04666 View Gene Set 0.005031 95 0.02692 40 Fc gamma R-mediated phagocytosis www.genome.jp/d...
KEGG 00910 View Gene Set 0.005713 23 0.02884 41 Nitrogen metabolism www.genome.jp/d...
KEGG 04370 View Gene Set 0.005795 76 0.02884 41 VEGF signaling pathway www.genome.jp/d...
KEGG 04740 View Gene Set 0.005527 388 0.02884 41 Olfactory transduction www.genome.jp/d...
KEGG 05416 View Gene Set 0.008173 74 0.03975 44 Viral myocarditis www.genome.jp/d...
KEGG 05100 View Gene Set 0.008874 73 0.0422 45 Bacterial invasion of epithelial cells www.genome.jp/d...
KEGG 04144 View Gene Set 0.009356 205 0.04353 46 Endocytosis www.genome.jp/d...
KEGG 05221 View Gene Set 0.009898 60 0.04507 47 Acute myeloid leukemia www.genome.jp/d...
KEGG 04916 View Gene Set 0.01083 102 0.0483 48 Melanogenesis www.genome.jp/d...

Gene Set Collection: GO

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
GO GO:0005886 View Gene Set 1.556e-72 3759 2.079e-68 1 plasma membrane amigo.geneontol...
GO GO:0044459 View Gene Set 1.491e-60 2023 9.958e-57 2 plasma membrane part amigo.geneontol...
GO GO:0031226 View Gene Set 9.839e-52 1208 4.381e-48 3 intrinsic to plasma membrane amigo.geneontol...
GO GO:0005887 View Gene Set 4.29e-51 1186 1.433e-47 4 integral to plasma membrane amigo.geneontol...
GO GO:0004872 View Gene Set 3.49e-50 1688 9.326e-47 5 receptor activity amigo.geneontol...
GO GO:0031224 View Gene Set 2.105e-48 5387 4.687e-45 6 intrinsic to membrane amigo.geneontol...
GO GO:0004871 View Gene Set 4.507e-48 2128 7.527e-45 7 signal transducer activity amigo.geneontol...
GO GO:0060089 View Gene Set 4.507e-48 2128 7.527e-45 7 molecular transducer activity amigo.geneontol...
GO GO:0044425 View Gene Set 4.693e-46 6145 6.967e-43 9 membrane part amigo.geneontol...
GO GO:0016021 View Gene Set 2.471e-44 5278 3.301e-41 10 integral to membrane amigo.geneontol...
GO GO:0016020 View Gene Set 1.858e-38 7286 2.257e-35 11 membrane amigo.geneontol...
GO GO:0004888 View Gene Set 2.207e-36 1275 2.457e-33 12 transmembrane receptor activity amigo.geneontol...
GO GO:0032501 View Gene Set 7.632e-35 4631 7.843e-32 13 multicellular organismal process amigo.geneontol...
GO GO:0005576 View Gene Set 1.504e-33 2036 1.436e-30 14 extracellular region amigo.geneontol...
GO GO:0023052 View Gene Set 9.71e-26 3571 8.648e-23 15 signaling amigo.geneontol...
GO GO:0003008 View Gene Set 2.703e-25 1632 2.257e-22 16 system process amigo.geneontol...
GO GO:0007166 View Gene Set 2.724e-22 1497 2.141e-19 17 cell surface receptor linked signaling pathway amigo.geneontol...
GO GO:0007155 View Gene Set 1.647e-18 827 1.158e-15 18 cell adhesion amigo.geneontol...
GO GO:0022610 View Gene Set 1.647e-18 828 1.158e-15 18 biological adhesion amigo.geneontol...
GO GO:0007186 View Gene Set 3.336e-18 543 2.229e-15 20 G-protein coupled receptor protein signaling pathway amigo.geneontol...
GO GO:0004930 View Gene Set 1.179e-17 855 7.501e-15 21 G-protein coupled receptor activity amigo.geneontol...
GO GO:0044421 View Gene Set 2.713e-17 1001 1.648e-14 22 extracellular region part amigo.geneontol...
GO GO:0007267 View Gene Set 5.272e-17 720 3.062e-14 23 cell-cell signaling amigo.geneontol...
GO GO:0023060 View Gene Set 9.999e-17 2571 5.566e-14 24 signal transmission amigo.geneontol...
GO GO:0007154 View Gene Set 1.76e-16 1687 9.408e-14 25 cell communication amigo.geneontol...
GO GO:0023046 View Gene Set 1.871e-16 2577 9.612e-14 26 signaling process amigo.geneontol...
GO GO:0006952 View Gene Set 3.949e-16 717 1.954e-13 27 defense response amigo.geneontol...
GO GO:0048856 View Gene Set 4.26e-16 2763 2.033e-13 28 anatomical structure development amigo.geneontol...
GO GO:0048731 View Gene Set 5.388e-16 2544 2.482e-13 29 system development amigo.geneontol...
GO GO:0050877 View Gene Set 7.084e-16 1272 3.155e-13 30 neurological system process amigo.geneontol...
GO GO:0050896 View Gene Set 8.981e-16 3765 3.871e-13 31 response to stimulus amigo.geneontol...
GO GO:0023033 View Gene Set 9.574e-16 2547 3.997e-13 32 signaling pathway amigo.geneontol...
GO GO:0022838 View Gene Set 9.531e-15 393 3.859e-12 33 substrate-specific channel activity amigo.geneontol...
GO GO:0006955 View Gene Set 1.296e-14 732 5.094e-12 34 immune response amigo.geneontol...
GO GO:0032502 View Gene Set 1.635e-14 3351 6.24e-12 35 developmental process amigo.geneontol...
GO GO:0015267 View Gene Set 2.681e-14 409 9.679e-12 36 channel activity amigo.geneontol...
GO GO:0022803 View Gene Set 2.681e-14 410 9.679e-12 36 passive transmembrane transporter activity amigo.geneontol...
GO GO:0051239 View Gene Set 2.991e-14 1088 1.052e-11 38 regulation of multicellular organismal process amigo.geneontol...
GO GO:0005216 View Gene Set 1.586e-13 382 5.435e-11 39 ion channel activity amigo.geneontol...
GO GO:0007275 View Gene Set 1.804e-13 3067 6.024e-11 40 multicellular organismal development amigo.geneontol...
GO GO:0006811 View Gene Set 2.164e-13 829 7.05e-11 41 ion transport amigo.geneontol...
GO GO:0065008 View Gene Set 4.142e-13 1741 1.317e-10 42 regulation of biological quality amigo.geneontol...
GO GO:0002376 View Gene Set 4.544e-13 1101 1.412e-10 43 immune system process amigo.geneontol...
GO GO:0022836 View Gene Set 6.903e-13 309 2.096e-10 44 gated channel activity amigo.geneontol...
GO GO:0015075 View Gene Set 1.356e-12 715 4.026e-10 45 ion transmembrane transporter activity amigo.geneontol...
GO GO:0022857 View Gene Set 2.997e-12 905 8.705e-10 46 transmembrane transporter activity amigo.geneontol...
GO GO:0005615 View Gene Set 5.261e-12 752 1.496e-09 47 extracellular space amigo.geneontol...
GO GO:0007165 View Gene Set 6.213e-12 2232 1.729e-09 48 signal transduction amigo.geneontol...
GO GO:0019226 View Gene Set 6.878e-12 421 1.875e-09 49 transmission of nerve impulse amigo.geneontol...
GO GO:0007268 View Gene Set 1.515e-11 362 4.048e-09 50 synaptic transmission amigo.geneontol...
GO GO:0005261 View Gene Set 1.728e-11 271 4.438e-09 51 cation channel activity amigo.geneontol...
GO GO:0022891 View Gene Set 1.713e-11 823 4.438e-09 51 substrate-specific transmembrane transporter activity amigo.geneontol...
GO GO:0005509 View Gene Set 3.823e-11 626 9.636e-09 53 calcium ion binding amigo.geneontol...
GO GO:0009611 View Gene Set 4.238e-11 621 1.049e-08 54 response to wounding amigo.geneontol...
GO GO:0007399 View Gene Set 5.505e-11 1174 1.337e-08 55 nervous system development amigo.geneontol...
GO GO:0009897 View Gene Set 6.353e-11 140 1.516e-08 56 external side of plasma membrane amigo.geneontol...
GO GO:0030001 View Gene Set 2.136e-10 496 5.007e-08 57 metal ion transport amigo.geneontol...
GO GO:0045202 View Gene Set 2.548e-10 371 5.87e-08 58 synapse amigo.geneontol...
GO GO:0006954 View Gene Set 4.539e-10 380 1.028e-07 59 inflammatory response amigo.geneontol...
GO GO:0009986 View Gene Set 5.198e-10 350 1.157e-07 60 cell surface amigo.geneontol...
GO GO:0022892 View Gene Set 6.773e-10 964 1.483e-07 61 substrate-specific transporter activity amigo.geneontol...
GO GO:0030154 View Gene Set 7.305e-10 1834 1.574e-07 62 cell differentiation amigo.geneontol...
GO GO:0048513 View Gene Set 8.632e-10 1931 1.831e-07 63 organ development amigo.geneontol...
GO GO:0006812 View Gene Set 8.845e-10 587 1.846e-07 64 cation transport amigo.geneontol...
GO GO:0031012 View Gene Set 1.419e-09 371 2.916e-07 65 extracellular matrix amigo.geneontol...
GO GO:0008324 View Gene Set 1.548e-09 548 3.133e-07 66 cation transmembrane transporter activity amigo.geneontol...
GO GO:0009653 View Gene Set 1.818e-09 1301 3.625e-07 67 anatomical structure morphogenesis amigo.geneontol...
GO GO:0048869 View Gene Set 2.117e-09 1883 4.16e-07 68 cellular developmental process amigo.geneontol...
GO GO:0044456 View Gene Set 2.275e-09 274 4.406e-07 69 synapse part amigo.geneontol...
GO GO:0042995 View Gene Set 2.776e-09 766 5.298e-07 70 cell projection amigo.geneontol...
GO GO:0048583 View Gene Set 3.456e-09 545 6.503e-07 71 regulation of response to stimulus amigo.geneontol...
GO GO:0034702 View Gene Set 5.352e-09 210 9.93e-07 72 ion channel complex amigo.geneontol...
GO GO:0005215 View Gene Set 6.664e-09 1174 1.22e-06 73 transporter activity amigo.geneontol...
GO GO:0010646 View Gene Set 7.713e-09 1173 1.392e-06 74 regulation of cell communication amigo.geneontol...
GO GO:0019725 View Gene Set 1.392e-08 500 2.48e-06 75 cellular homeostasis amigo.geneontol...
GO GO:0006816 View Gene Set 1.411e-08 196 2.481e-06 76 calcium ion transport amigo.geneontol...
GO GO:0003013 View Gene Set 1.823e-08 250 3.123e-06 77 circulatory system process amigo.geneontol...
GO GO:0008015 View Gene Set 1.823e-08 250 3.123e-06 77 blood circulation amigo.geneontol...
GO GO:0055082 View Gene Set 2.306e-08 411 3.9e-06 79 cellular chemical homeostasis amigo.geneontol...
GO GO:0001653 View Gene Set 2.789e-08 113 4.6e-06 80 peptide receptor activity amigo.geneontol...
GO GO:0008528 View Gene Set 2.789e-08 113 4.6e-06 80 peptide receptor activity G-protein coupled amigo.geneontol...
GO GO:0035556 View Gene Set 3.014e-08 1205 4.851e-06 82 intracellular signal transduction amigo.geneontol...
GO GO:0070838 View Gene Set 3.004e-08 203 4.851e-06 82 divalent metal ion transport amigo.geneontol...
GO GO:0006873 View Gene Set 3.566e-08 405 5.605e-06 84 cellular ion homeostasis amigo.geneontol...
GO GO:0009605 View Gene Set 3.531e-08 666 5.605e-06 84 response to external stimulus amigo.geneontol...
GO GO:0007610 View Gene Set 3.796e-08 492 5.898e-06 86 behavior amigo.geneontol...
GO GO:0055065 View Gene Set 6.45e-08 225 9.905e-06 87 metal ion homeostasis amigo.geneontol...
GO GO:0030054 View Gene Set 6.757e-08 539 1.026e-05 88 cell junction amigo.geneontol...
GO GO:0044433 View Gene Set 7.247e-08 274 1.088e-05 89 cytoplasmic vesicle part amigo.geneontol...
GO GO:0005244 View Gene Set 9.388e-08 190 1.378e-05 90 voltage-gated ion channel activity amigo.geneontol...
GO GO:0022832 View Gene Set 9.388e-08 190 1.378e-05 90 voltage-gated channel activity amigo.geneontol...
GO GO:0006875 View Gene Set 1.299e-07 215 1.886e-05 92 cellular metal ion homeostasis amigo.geneontol...
GO GO:0015674 View Gene Set 1.771e-07 239 2.545e-05 93 di- tri-valent inorganic cation transport amigo.geneontol...
GO GO:0005578 View Gene Set 1.93e-07 313 2.743e-05 94 proteinaceous extracellular matrix amigo.geneontol...
GO GO:0006928 View Gene Set 2.026e-07 653 2.849e-05 95 cellular component movement amigo.geneontol...
GO GO:0015276 View Gene Set 2.175e-07 128 2.996e-05 96 ligand-gated ion channel activity amigo.geneontol...
GO GO:0022834 View Gene Set 2.175e-07 128 2.996e-05 96 ligand-gated channel activity amigo.geneontol...
GO GO:0006813 View Gene Set 2.534e-07 137 3.454e-05 98 potassium ion transport amigo.geneontol...
GO GO:0050801 View Gene Set 2.796e-07 441 3.773e-05 99 ion homeostasis amigo.geneontol...
GO GO:0048878 View Gene Set 3.26e-07 563 4.355e-05 100 chemical homeostasis amigo.geneontol...
GO GO:0015672 View Gene Set 3.516e-07 306 4.611e-05 101 monovalent inorganic cation transport amigo.geneontol...
GO GO:0042592 View Gene Set 3.52e-07 844 4.611e-05 101 homeostatic process amigo.geneontol...
GO GO:0046903 View Gene Set 3.678e-07 502 4.771e-05 103 secretion amigo.geneontol...
GO GO:0044057 View Gene Set 3.888e-07 315 4.995e-05 104 regulation of system process amigo.geneontol...
GO GO:0016023 View Gene Set 3.937e-07 651 5.01e-05 105 cytoplasmic membrane-bounded vesicle amigo.geneontol...
GO GO:0006874 View Gene Set 5e-07 204 6.251e-05 106 cellular calcium ion homeostasis amigo.geneontol...
GO GO:0000267 View Gene Set 5.006e-07 1077 6.251e-05 106 cell fraction amigo.geneontol...
GO GO:0002682 View Gene Set 5.477e-07 425 6.775e-05 108 regulation of immune system process amigo.geneontol...
GO GO:0008021 View Gene Set 5.615e-07 83 6.883e-05 109 synaptic vesicle amigo.geneontol...
GO GO:0007160 View Gene Set 5.777e-07 120 7.016e-05 110 cell-matrix adhesion amigo.geneontol...
GO GO:0032879 View Gene Set 6.913e-07 741 8.321e-05 111 regulation of localization amigo.geneontol...
GO GO:0022008 View Gene Set 7.081e-07 646 8.447e-05 112 neurogenesis amigo.geneontol...
GO GO:0009887 View Gene Set 7.317e-07 659 8.651e-05 113 organ morphogenesis amigo.geneontol...
GO GO:0048699 View Gene Set 7.44e-07 601 8.719e-05 114 generation of neurons amigo.geneontol...
GO GO:0005626 View Gene Set 8.394e-07 830 9.752e-05 115 insoluble fraction amigo.geneontol...
GO GO:0007187 View Gene Set 8.625e-07 116 9.933e-05 116 G-protein signaling coupled to cyclic nucleotide second messenger amigo.geneontol...
GO GO:0022843 View Gene Set 9.639e-07 143 0.0001101 117 voltage-gated cation channel activity amigo.geneontol...
GO GO:0055074 View Gene Set 1.072e-06 211 0.0001214 118 calcium ion homeostasis amigo.geneontol...
GO GO:0051049 View Gene Set 1.17e-06 525 0.0001302 119 regulation of transport amigo.geneontol...
GO GO:0030659 View Gene Set 1.179e-06 235 0.0001302 119 cytoplasmic vesicle membrane amigo.geneontol...
GO GO:0031225 View Gene Set 1.176e-06 133 0.0001302 119 anchored to membrane amigo.geneontol...
GO GO:0031988 View Gene Set 1.276e-06 670 0.0001397 122 membrane-bounded vesicle amigo.geneontol...
GO GO:0015844 View Gene Set 1.291e-06 44 0.0001403 123 monoamine transport amigo.geneontol...
GO GO:0050776 View Gene Set 1.307e-06 249 0.0001409 124 regulation of immune response amigo.geneontol...
GO GO:0030182 View Gene Set 1.406e-06 546 0.0001503 125 neuron differentiation amigo.geneontol...
GO GO:0030246 View Gene Set 1.553e-06 367 0.0001646 126 carbohydrate binding amigo.geneontol...
GO GO:0031410 View Gene Set 1.571e-06 688 0.0001653 127 cytoplasmic vesicle amigo.geneontol...
GO GO:0034703 View Gene Set 1.59e-06 136 0.000166 128 cation channel complex amigo.geneontol...
GO GO:0005230 View Gene Set 1.755e-06 73 0.0001804 129 extracellular ligand-gated ion channel activity amigo.geneontol...
GO GO:0042165 View Gene Set 1.753e-06 76 0.0001804 129 neurotransmitter binding amigo.geneontol...
GO GO:0051952 View Gene Set 1.795e-06 37 0.0001817 131 regulation of amine transport amigo.geneontol...
GO GO:0005102 View Gene Set 1.785e-06 928 0.0001817 131 receptor binding amigo.geneontol...
GO GO:0006959 View Gene Set 1.911e-06 85 0.000192 133 humoral immune response amigo.geneontol...
GO GO:0003012 View Gene Set 1.972e-06 221 0.0001966 134 muscle system process amigo.geneontol...
GO GO:0051480 View Gene Set 2.263e-06 143 0.0002239 135 cytosolic calcium ion homeostasis amigo.geneontol...
GO GO:0006936 View Gene Set 2.329e-06 206 0.0002271 136 muscle contraction amigo.geneontol...
GO GO:0019932 View Gene Set 2.318e-06 259 0.0002271 136 second-messenger-mediated signaling amigo.geneontol...
GO GO:0030003 View Gene Set 2.643e-06 277 0.0002559 138 cellular cation homeostasis amigo.geneontol...
GO GO:0031644 View Gene Set 2.746e-06 147 0.0002639 139 regulation of neurological system process amigo.geneontol...
GO GO:0019882 View Gene Set 2.793e-06 62 0.0002665 140 antigen processing and presentation amigo.geneontol...
GO GO:0031589 View Gene Set 2.825e-06 152 0.0002677 141 cell-substrate adhesion amigo.geneontol...
GO GO:0051969 View Gene Set 2.897e-06 137 0.0002725 142 regulation of transmission of nerve impulse amigo.geneontol...
GO GO:0031982 View Gene Set 2.936e-06 718 0.0002743 143 vesicle amigo.geneontol...
GO GO:0005624 View Gene Set 3.035e-06 799 0.0002816 144 membrane fraction amigo.geneontol...
GO GO:0007204 View Gene Set 3.23e-06 134 0.0002976 145 elevation of cytosolic calcium ion concentration amigo.geneontol...
GO GO:0030005 View Gene Set 3.363e-06 250 0.0003077 146 cellular di- tri-valent inorganic cation homeostasis amigo.geneontol...
GO GO:0043269 View Gene Set 3.779e-06 109 0.0003435 147 regulation of ion transport amigo.geneontol...
GO GO:0048002 View Gene Set 3.881e-06 27 0.0003493 148 antigen processing and presentation of peptide antigen amigo.geneontol...
GO GO:0048732 View Gene Set 3.896e-06 204 0.0003493 148 gland development amigo.geneontol...
GO GO:0002684 View Gene Set 4.047e-06 274 0.0003604 150 positive regulation of immune system process amigo.geneontol...
GO GO:2000026 View Gene Set 4.131e-06 625 0.0003655 151 regulation of multicellular organismal development amigo.geneontol...
GO GO:0016337 View Gene Set 4.585e-06 318 0.000403 152 cell-cell adhesion amigo.geneontol...
GO GO:0050804 View Gene Set 4.661e-06 126 0.000407 153 regulation of synaptic transmission amigo.geneontol...
GO GO:0030136 View Gene Set 4.732e-06 147 0.0004105 154 clathrin-coated vesicle amigo.geneontol...
GO GO:0042221 View Gene Set 4.83e-06 1516 0.0004163 155 response to chemical stimulus amigo.geneontol...
GO GO:0007586 View Gene Set 5.228e-06 99 0.0004477 156 digestion amigo.geneontol...
GO GO:0004252 View Gene Set 5.782e-06 154 0.000492 157 serine-type endopeptidase activity amigo.geneontol...
GO GO:0008509 View Gene Set 6.035e-06 148 0.0005103 158 anion transmembrane transporter activity amigo.geneontol...
GO GO:0048468 View Gene Set 6.402e-06 804 0.000538 159 cell development amigo.geneontol...
GO GO:0007611 View Gene Set 7.002e-06 110 0.0005847 160 learning or memory amigo.geneontol...
GO GO:0010959 View Gene Set 7.427e-06 92 0.0006155 161 regulation of metal ion transport amigo.geneontol...
GO GO:0048168 View Gene Set 7.464e-06 32 0.0006155 161 regulation of neuronal synaptic plasticity amigo.geneontol...
GO GO:0035466 View Gene Set 7.625e-06 1022 0.000625 163 regulation of signaling pathway amigo.geneontol...
GO GO:0008227 View Gene Set 8.789e-06 38 0.000716 164 G-protein coupled amine receptor activity amigo.geneontol...
GO GO:0019935 View Gene Set 8.904e-06 137 0.000721 165 cyclic-nucleotide-mediated signaling amigo.geneontol...
GO GO:0007600 View Gene Set 9.456e-06 830 0.0007601 166 sensory perception amigo.geneontol...
GO GO:0007612 View Gene Set 9.507e-06 51 0.0007601 166 learning amigo.geneontol...
GO GO:0050793 View Gene Set 9.558e-06 748 0.0007601 166 regulation of developmental process amigo.geneontol...
GO GO:0051937 View Gene Set 1.01e-05 34 0.0007988 169 catecholamine transport amigo.geneontol...
GO GO:0015850 View Gene Set 1.037e-05 51 0.0008151 170 organic alcohol transport amigo.geneontol...
GO GO:0015837 View Gene Set 1.103e-05 147 0.0008621 171 amine transport amigo.geneontol...
GO GO:0009888 View Gene Set 1.173e-05 827 0.0009109 172 tissue development amigo.geneontol...
GO GO:0032101 View Gene Set 1.184e-05 190 0.0009146 173 regulation of response to external stimulus amigo.geneontol...
GO GO:0055080 View Gene Set 1.23e-05 310 0.0009448 174 cation homeostasis amigo.geneontol...
GO GO:0005267 View Gene Set 1.248e-05 130 0.0009529 175 potassium channel activity amigo.geneontol...
GO GO:0043005 View Gene Set 1.375e-05 371 0.001044 176 neuron projection amigo.geneontol...
GO GO:0040011 View Gene Set 1.475e-05 617 0.001113 177 locomotion amigo.geneontol...
GO GO:0002449 View Gene Set 1.614e-05 110 0.001211 178 lymphocyte mediated immunity amigo.geneontol...
GO GO:0051924 View Gene Set 1.837e-05 79 0.001371 179 regulation of calcium ion transport amigo.geneontol...
GO GO:0045211 View Gene Set 1.929e-05 155 0.001432 180 postsynaptic membrane amigo.geneontol...
GO GO:0005231 View Gene Set 1.957e-05 48 0.001444 181 excitatory extracellular ligand-gated ion channel activity amigo.geneontol...
GO GO:0007565 View Gene Set 2.01e-05 119 0.001467 182 female pregnancy amigo.geneontol...
GO GO:0030594 View Gene Set 2.008e-05 66 0.001467 182 neurotransmitter receptor activity amigo.geneontol...
GO GO:0008217 View Gene Set 2.104e-05 101 0.001527 184 regulation of blood pressure amigo.geneontol...
GO GO:0014902 View Gene Set 2.142e-05 25 0.001547 185 myotube differentiation amigo.geneontol...
GO GO:0012506 View Gene Set 2.175e-05 246 0.001562 186 vesicle membrane amigo.geneontol...
GO GO:0009966 View Gene Set 2.302e-05 789 0.001645 187 regulation of signal transduction amigo.geneontol...
GO GO:0043062 View Gene Set 2.369e-05 174 0.001684 188 extracellular structure organization amigo.geneontol...
GO GO:0023051 View Gene Set 2.394e-05 794 0.001692 189 regulation of signaling process amigo.geneontol...
GO GO:0051179 View Gene Set 2.421e-05 3376 0.001703 190 localization amigo.geneontol...
GO GO:0043647 View Gene Set 2.444e-05 11 0.00171 191 inositol phosphate metabolic process amigo.geneontol...
GO GO:0007588 View Gene Set 2.596e-05 59 0.001807 192 excretion amigo.geneontol...
GO GO:0050878 View Gene Set 2.729e-05 205 0.001889 193 regulation of body fluid levels amigo.geneontol...
GO GO:0050890 View Gene Set 2.795e-05 117 0.001925 194 cognition amigo.geneontol...
GO GO:0008076 View Gene Set 2.871e-05 87 0.001957 195 voltage-gated potassium channel complex amigo.geneontol...
GO GO:0034705 View Gene Set 2.871e-05 87 0.001957 195 potassium channel complex amigo.geneontol...
GO GO:0051046 View Gene Set 2.898e-05 243 0.001965 197 regulation of secretion amigo.geneontol...
GO GO:0045595 View Gene Set 3.036e-05 563 0.002049 198 regulation of cell differentiation amigo.geneontol...
GO GO:0043235 View Gene Set 3.096e-05 115 0.002078 199 receptor complex amigo.geneontol...
GO GO:0005539 View Gene Set 3.304e-05 151 0.002207 200 glycosaminoglycan binding amigo.geneontol...

Gene Set Collection: Broad.c1.CYTOBAND

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad chr19q13 View Gene Set 1.712e-14 765 5.581e-12 1 Genes in cytogenetic band chr19q13 www.broad.mit.e...
Broad chr6p21 View Gene Set 2.534e-07 479 4.131e-05 2 Genes in cytogenetic band chr6p21 www.broad.mit.e...
Broad chr12q13 View Gene Set 1.341e-05 257 0.001457 3 Genes in cytogenetic band chr12q13 www.broad.mit.e...
Broad chr16p11 View Gene Set 2.272e-05 148 0.001851 4 Genes in cytogenetic band chr16p11 www.broad.mit.e...
Broad chr16q13 View Gene Set 4.285e-05 45 0.002794 5 Genes in cytogenetic band chr16q13 www.broad.mit.e...
Broad chr1p36 View Gene Set 0.0001389 385 0.006467 6 Genes in cytogenetic band chr1p36 www.broad.mit.e...
Broad chr16p13 View Gene Set 0.0001311 254 0.006467 6 Genes in cytogenetic band chr16p13 www.broad.mit.e...
Broad chr11q13 View Gene Set 0.0006252 276 0.02314 8 Genes in cytogenetic band chr11q13 www.broad.mit.e...
Broad chrxq13 View Gene Set 0.0006387 75 0.02314 8 Genes in cytogenetic band chrxq13 www.broad.mit.e...
Broad chr19p13 View Gene Set 0.001123 514 0.03489 10 Genes in cytogenetic band chr19p13 www.broad.mit.e...
Broad chr1q23 View Gene Set 0.001391 120 0.03489 10 Genes in cytogenetic band chr1q23 www.broad.mit.e...
Broad chr3p21 View Gene Set 0.001309 226 0.03489 10 Genes in cytogenetic band chr3p21 www.broad.mit.e...
Broad chr11q11 View Gene Set 0.001177 102 0.03489 10 Genes in cytogenetic band chr11q11 www.broad.mit.e...

Gene Set Collection: Broad.c2.CGP

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad SHEN_SMARCA2_TARGETS_DN View Gene Set 1.814e-60 334 4.339e-57 1 Genes whose expression negatively correlated with that of SMARCA2 [Gene ID=6595] in prostate cancer samples. www.broad.mit.e...
Broad MOREAUX_MULTIPLE_MYELOMA_BY_TACI_UP View Gene Set 2.21e-29 365 2.643e-26 2 Genes distinguishing in multiple myeloma (MM) samples with higher expression of TACI [Gene ID=23495]. www.broad.mit.e...
Broad BENPORATH_ES_WITH_H3K27ME3 View Gene Set 3.773e-27 1094 3.008e-24 3 Set 'H3K27 bound': genes posessing the trimethylated H3K27 (H3K27me3) mark in their promoters in human embryonic stem cells as identified by ChIP on chip. www.broad.mit.e...
Broad SMID_BREAST_CANCER_NORMAL_LIKE_UP View Gene Set 1.593e-21 459 9.525e-19 4 Genes up-regulated in the normal-like subtype of breast cancer. www.broad.mit.e...
Broad TARTE_PLASMA_CELL_VS_PLASMABLAST_UP View Gene Set 1.236e-18 386 5.911e-16 5 Genes up-regulated in mature plasma cells compared with plasmablastic B lymphocytes. www.broad.mit.e...
Broad BENPORATH_SUZ12_TARGETS View Gene Set 7.485e-18 1011 2.984e-15 6 Set 'Suz12 targets': genes identified by ChIP on chip as targets of the Polycomb protein SUZ12 [Gene ID=23512] in human embryonic stem cells. www.broad.mit.e...
Broad DODD_NASOPHARYNGEAL_CARCINOMA_UP View Gene Set 5.515e-17 1582 1.885e-14 7 Genes up-regulated in nasopharyngeal carcinoma (NPC) compared to the normal tissue. www.broad.mit.e...
Broad SATO_SILENCED_BY_METHYLATION_IN_PANCREATIC_CANCER_1 View Gene Set 3.171e-14 407 9.481e-12 8 Genes up-regulated in the pancreatic cancer cell lines (AsPC1 Hs766T MiaPaCa2 Panc1) but not in the non-neoplastic cells (HPDE) by decitabine (5-aza-2'-deoxycytidine) [PubChem=451668]. www.broad.mit.e...
Broad EBAUER_TARGETS_OF_PAX3_FOXO1_FUSION_UP View Gene Set 4.433e-14 201 1.166e-11 9 Genes up-regulated in Rh4 cells (alveolar rhabdomyosarcoma ARMS) after knockdown of the PAX3-FOXO1 [Gene iD=5077 2308] fusion protein by RNAi for 72 hr. www.broad.mit.e...
Broad BENPORATH_PRC2_TARGETS View Gene Set 4.873e-14 636 1.166e-11 9 Set 'PRC2 targets': Polycomb Repression Complex 2 (PRC) targets; identified by ChIP on chip on human embryonic stem cells as genes that: posess the trimethylated H3K27 mark in their promoters and are bound by SUZ12 [Gene ID=23512] and EED [Gene ID=8726] Polycomb proteins. www.broad.mit.e...
Broad HUTTMANN_B_CLL_POOR_SURVIVAL_UP View Gene Set 6.471e-13 268 1.407e-10 11 Up-regulated genes in B-CLL (B-cell chronic leukemia) patients expressing high levels of ZAP70 and CD38 [Gene ID=7535 952] which are associated with poor survival. www.broad.mit.e...
Broad WEST_ADRENOCORTICAL_TUMOR_DN View Gene Set 1.25e-10 531 2.491e-08 12 Down-regulated genes in pediatric adrenocortical tumors (ACT) compared to the normal tissue. www.broad.mit.e...
Broad SHEDDEN_LUNG_CANCER_GOOD_SURVIVAL_A12 View Gene Set 1.557e-10 296 2.865e-08 13 Cluster 12 of method A: up-regulation of these genes in patients with non-small cell lung cancer (NSCLC) predicts good survival outcome. www.broad.mit.e...
Broad XU_HGF_TARGETS_REPRESSED_BY_AKT1_DN View Gene Set 6.655e-10 75 1.137e-07 14 Genes down-regulated in DU-145 cells (prostate cancer) in the presence but not in the absence of a dominant negative form of AKT1 [Gene ID=207] upon exposure to HGF [Gene ID=3082] for 48 hr. www.broad.mit.e...
Broad SABATES_COLORECTAL_ADENOMA_DN View Gene Set 3.095e-09 276 4.935e-07 15 Genes down-regulated in colorectal adenoma compared to normal mucosa samples. www.broad.mit.e...
Broad SMID_BREAST_CANCER_LUMINAL_B_DN View Gene Set 9.605e-09 549 1.351e-06 16 Genes down-regulated in the luminal B subtype of breast cancer. www.broad.mit.e...
Broad SMID_BREAST_CANCER_BASAL_DN View Gene Set 9.457e-09 664 1.351e-06 16 Genes down-regulated in basal subtype of breast cancer samles. www.broad.mit.e...
Broad CAIRO_HEPATOBLASTOMA_CLASSES_DN View Gene Set 1.143e-08 205 1.519e-06 18 Genes down-regulated in robust Cluster 2 (rC2) of hepatoblastoma samples compared to those in the robust Cluster 1 (rC1). www.broad.mit.e...
Broad BENPORATH_EED_TARGETS View Gene Set 1.499e-08 1033 1.887e-06 19 Set 'Eed targets': genes identified by ChIP on chip as targets of the Polycomb protein EED [Gene ID=8726] in human embryonic stem cells. www.broad.mit.e...
Broad KIM_GASTRIC_CANCER_CHEMOSENSITIVITY View Gene Set 5.825e-08 97 6.967e-06 20 Genes up-regulated in gastric cancer patients refractory to chemotherapy treatment with 5-fluorouracil and cisplatin [PubChem=3385 2767] compared to the sensitive state. www.broad.mit.e...
Broad HATADA_METHYLATED_IN_LUNG_CANCER_UP View Gene Set 8.74e-08 355 9.955e-06 21 Genes with hypermethylated DNA in lung cancer samples. www.broad.mit.e...
Broad RICKMAN_METASTASIS_DN View Gene Set 1.074e-07 246 1.168e-05 22 Genes down-regulated in metastatic vs non-metastatic HNSCC (head and neck squamous cell carcinoma) samples. www.broad.mit.e...
Broad PEREZ_TP63_TARGETS View Gene Set 1.485e-07 328 1.544e-05 23 Genes up-regulated in the HMEC cells (primary mammary epithelium) upon expression of the transcriptionally active isoform of TP63 [Gene ID=8626] off adenoviral vector. www.broad.mit.e...
Broad ODONNELL_METASTASIS_UP View Gene Set 1.747e-07 77 1.742e-05 24 Up-regulated genes in the signature set for lymph node metastasis in head and neck squamous cell carcinoma (HNSCC). www.broad.mit.e...
Broad WALLACE_PROSTATE_CANCER_RACE_UP View Gene Set 1.835e-07 288 1.755e-05 25 Genes up-regulated in prostate cancer samples from African-American patients compared to those from the European-American patients. www.broad.mit.e...
Broad SCHLOSSER_SERUM_RESPONSE_UP View Gene Set 3.447e-07 131 3.171e-05 26 Cluster 1: genes up-regulated in B493-6 cells (B lymphocytes) upon serum stimulation but not by affected by MYC [Gene ID=4609]. www.broad.mit.e...
Broad MOREAUX_B_LYMPHOCYTE_MATURATION_BY_TACI_UP View Gene Set 8.713e-07 70 7.719e-05 27 Genes up-regulated in normal bone marrow plasma cells (BMPC) compared to polyclonal plasmablasts (PPC) that also distinguished multiple myeloma (MM) samples by expression of levels of TACI (TNFRSF13B) [Gene ID=23495]. www.broad.mit.e...
Broad RODWELL_AGING_KIDNEY_UP View Gene Set 9.499e-07 326 8.115e-05 28 Genes whose expression increases with age in normal kidney. www.broad.mit.e...
Broad LINDGREN_BLADDER_CANCER_CLUSTER_2B View Gene Set 1.265e-06 384 0.0001044 29 Genes specifically up-regulated in Cluster IIb of urothelial cell carcinom (UCC) tumors. www.broad.mit.e...
Broad TONKS_TARGETS_OF_RUNX1_RUNX1T1_FUSION_HSC_DN View Gene Set 4.213e-06 184 0.0003359 30 Genes down-regulated in normal hematopoietic progenitors by RUNX1-RUNX1T1 [Gene ID=861 862] fusion. www.broad.mit.e...
Broad SMID_BREAST_CANCER_ERBB2_UP View Gene Set 4.555e-06 138 0.0003515 31 Genes up-regulated in the erbb2 subype of breast cancer samples characterized by higher expression of ERBB2 [Gene ID=2064]. www.broad.mit.e...
Broad VERHAAK_AML_WITH_NPM1_MUTATED_DN View Gene Set 4.757e-06 241 0.0003556 32 Genes down-regulated in acute myeloid leukemia (AML) patients with mutated NPM1 [Gene ID=4869]. www.broad.mit.e...
Broad DOANE_RESPONSE_TO_ANDROGEN_UP View Gene Set 5.355e-06 175 0.0003768 33 Genes up-regulated in MDA-MB-453 cells (class A ER(-) [Gene ID=2099] breast cancer) after exposure to the androgen R1881 [PubChem=13766]. www.broad.mit.e...
Broad NAKAYAMA_SOFT_TISSUE_TUMORS_PCA2_DN View Gene Set 5.3e-06 78 0.0003768 33 Top 100 probe sets contrubuting to the negative side of the 2nd principal component; associated with adipocytic differentiation. www.broad.mit.e...
Broad GINESTIER_BREAST_CANCER_ZNF217_AMPLIFIED_DN View Gene Set 8.622e-06 308 0.0005892 35 Genes down-regulated in non-metastatic breast cancer tumors having type 1 amplification in the 20q13 region; involves ZNF217 [Gene ID=7764] locus only. www.broad.mit.e...
Broad RODRIGUES_NTN1_TARGETS_DN View Gene Set 9.941e-06 151 0.0006427 36 Genes down-regulated in HCT8/S11 cells (colon cancer) engineered to stably express NTN1 [Gene ID=1630] off a plasmid vector. www.broad.mit.e...
Broad PEREZ_TP53_TARGETS View Gene Set 9.71e-06 1066 0.0006427 36 Genes up-regulated in the HMEC cells (primary mammary epithelium) upon expression of TP53 [Gene ID=7157] off adenoviral vector. www.broad.mit.e...
Broad FLECHNER_BIOPSY_KIDNEY_TRANSPLANT_REJECTED_VS_OK_UP View Gene Set 1.054e-05 86 0.0006635 38 Genes differentially expressed in kidney biopsies from patients with acute transplant rejection compared to the biopsies from patients with well functioning kidneys more than 1-year post transplant. www.broad.mit.e...
Broad NIKOLSKY_BREAST_CANCER_16P13_AMPLICON View Gene Set 1.224e-05 115 0.0007504 39 Genes within amplicon 16p13 identified in a study of 191 breast tumor samples. www.broad.mit.e...
Broad SENGUPTA_EBNA1_ANTICORRELATED View Gene Set 1.384e-05 156 0.0008278 40 Genes whose reduced expression in nasopharyngeal carinoma (NPC) correlated most with the increased expression of EBNA1 [Gene ID=3783774] a latent gene of Epstein-Barr virus (EBV). www.broad.mit.e...
Broad VECCHI_GASTRIC_CANCER_EARLY_DN View Gene Set 1.583e-05 346 0.0009238 41 Down-regulated genes distinguishing between early gastric cancer (EGC) and normal tissue samples. www.broad.mit.e...
Broad BORCZUK_MALIGNANT_MESOTHELIOMA_DN View Gene Set 1.91e-05 100 0.001088 42 Genes down-regulated in biphasic (mixed) vs epithelial subtypes of malignant peritoneal mesothelioma. www.broad.mit.e...
Broad RICKMAN_HEAD_AND_NECK_CANCER_D View Gene Set 2.259e-05 36 0.001228 43 Cluster d: genes identifying an intrinsic group in head and neck squamous cell carcinoma (HNSCC). www.broad.mit.e...
Broad VERRECCHIA_RESPONSE_TO_TGFB1_C5 View Gene Set 2.222e-05 20 0.001228 43 Cluster 5: ECM related genes up-regulated in dermal fibroblasts later than 30 min after TGFB1 [Gene ID=7040] addition; decreased slowly after the peak at 120 min time point. www.broad.mit.e...
Broad KAAB_HEART_ATRIUM_VS_VENTRICLE_UP View Gene Set 2.964e-05 239 0.001576 45 Genes up-regulated in the atria of healthy hearts compared to venticles. www.broad.mit.e...
Broad KAYO_AGING_MUSCLE_UP View Gene Set 3.429e-05 194 0.001783 46 Upregulated in the vastus lateralis muscle of aged vs young adult rhesus monkeys www.broad.mit.e...
Broad NAKAYAMA_SOFT_TISSUE_TUMORS_PCA1_UP View Gene Set 3.532e-05 74 0.001797 47 Top 100 probe sets contrubuting to the positive side of the 1st principal component; predominantly associated with spindle cell and pleomorphic sarcoma samples. www.broad.mit.e...
Broad CHANDRAN_METASTASIS_DN View Gene Set 4.785e-05 90 0.002385 48 Genes down-regulated in metastatic tumors from the whole panel of patients with prostate cancer. www.broad.mit.e...
Broad JAATINEN_HEMATOPOIETIC_STEM_CELL_DN View Gene Set 5.066e-05 215 0.002473 49 Genes up-regulated in CD133+ [Gene ID=8842] cells (hematopoietic stem cells HSC) compared to the CD133- cells. www.broad.mit.e...
Broad JIANG_TIP30_TARGETS_DN View Gene Set 6.366e-05 23 0.003045 50 Down-regulated genes in HepG2 cells (liver cancer) overexpressing an oncogenic variant of tumor suppressor TIP30 [Gene ID=10553] compared to its wild type form. www.broad.mit.e...
Broad BROWNE_HCMV_INFECTION_18HR_DN View Gene Set 7.314e-05 171 0.00343 51 Genes down-regulated in primary fibroblast cell culture after infection with HCMV (AD169 strain) at 18 h time point that were not down-regulated at the previous time point 16 h. www.broad.mit.e...
Broad COLIN_PILOCYTIC_ASTROCYTOMA_VS_GLIOBLASTOMA_UP View Gene Set 7.761e-05 34 0.00357 52 Genes up-regulated in pilocytic astrocytoma compared to glioblastoma samples. www.broad.mit.e...
Broad JAZAG_TGFB1_SIGNALING_VIA_SMAD4_DN View Gene Set 9.248e-05 64 0.004174 53 Genes down-regulated in PANC-1-S4KD cells (pancreatic cancer; SMAD4 [Gene ID=4089] knocked down by RNAi) after stimulation by TGF1B [Gene ID=7040] for 2 h. www.broad.mit.e...
Broad VART_KSHV_INFECTION_ANGIOGENIC_MARKERS_UP View Gene Set 0.000114 163 0.005049 54 Angiogenic markers up-regulated in lymph endothelial cells upon infection with KSHV (Kaposi's sarcoma herpes virus). www.broad.mit.e...
Broad PEREZ_TP53_AND_TP63_TARGETS View Gene Set 0.0001177 187 0.00512 55 Genes up-regulated in HMEC cells (primary mammary epithelium) upon expression of both of TP53 [Gene ID=7157] and the transcriptionally active isoform of TP63 [Gene ID=8626] off adenoviral vectors. www.broad.mit.e...
Broad TAKEDA_TARGETS_OF_NUP98_HOXA9_FUSION_6HR_DN View Gene Set 0.000124 37 0.005296 56 Genes down-rgulated in CD34+ [Gene ID=947] hematopoetic cells by expression of NUP98-HOXA9 fusion [Gene ID=4928 3205] off a retroviral vector at 6h. www.broad.mit.e...
Broad FARMER_BREAST_CANCER_CLUSTER_1 View Gene Set 0.000128 44 0.005371 57 Cluster 1: interferon T and B lymphocyte genes clustered together across breast cancer samples. www.broad.mit.e...
Broad LEE_NEURAL_CREST_STEM_CELL_UP View Gene Set 0.0001349 142 0.005564 58 Genes up-regulated in the neural crest stem cells (NCS) defined as p75+/HNK1+ [Gene ID=4804 27087]. www.broad.mit.e...
Broad DEURIG_T_CELL_PROLYMPHOCYTIC_LEUKEMIA_UP View Gene Set 0.0001518 351 0.006153 59 Genes up-regulated in T-PLL cells (T-cell prolymphocytic leukemia) bearing the inv(14)/t(14:14) chromosomal aberration. www.broad.mit.e...
Broad WANG_BARRETTS_ESOPHAGUS_UP View Gene Set 0.0001591 46 0.006344 60 Genes up-regulated in Barrett's esophagus compared to the normal tissue. www.broad.mit.e...
Broad XU_GH1_EXOGENOUS_TARGETS_UP View Gene Set 0.0001849 48 0.007252 61 Genes up-regulated in MFCF-7 cells (breast cancer) by exogenous HG1 [Gene ID=2688]. www.broad.mit.e...
Broad ODONNELL_TFRC_TARGETS_UP View Gene Set 0.0002098 401 0.007883 62 Genes up-regulated in P493-6 cells (B lymphocyte) upon knockdown of TFRC [Gene ID=7037] by RNAi. www.broad.mit.e...
Broad SCHLOSSER_SERUM_RESPONSE_AUGMENTED_BY_MYC View Gene Set 0.0002109 101 0.007883 62 Cluster 2: genes up-regulated in B493-6 cells (B lymphocytes) by serum alone or in combination with MYC [Gene ID=4609] but not by MYC alone. www.broad.mit.e...
Broad BOYLAN_MULTIPLE_MYELOMA_PCA1_UP View Gene Set 0.000205 80 0.007883 62 Top up-regulated genes from principal component 1 (PCA1) which captures variation between normal plasma cells and tumors arising from aberrant expression of BCL2L1 and MYC [Gene ID=598 4609]. www.broad.mit.e...
Broad BANDRES_RESPONSE_TO_CARMUSTIN_MGMT_48HR_DN View Gene Set 0.0002386 138 0.00878 65 Genes down-regulated in T98G cells (glioma express MGMT [Gene ID=4255]) by carmustine [PubChem=2578] at 48 h. www.broad.mit.e...
Broad REN_ALVEOLAR_RHABDOMYOSARCOMA_UP View Gene Set 0.0002656 95 0.009628 66 Genes commonly up-regulated in human alveolar rhabdomyosarcoma (ARMS) and its mouse model overexpressing PAX3-FOXO1 [Gene ID=5077 2308] fusion. www.broad.mit.e...
Broad SHIPP_DLBCL_VS_FOLLICULAR_LYMPHOMA_DN View Gene Set 0.0002924 44 0.01044 67 Top 50 down-regulated markers distinguishing diffuse large B-cell lymphoma (DLBCL) from follicular lymphoma (FL) samples. www.broad.mit.e...
Broad BERTUCCI_INVASIVE_CARCINOMA_DUCTAL_VS_LOBULAR_DN View Gene Set 0.0003046 45 0.01071 68 Genes down-regulated in the invasive ductal carcinoma (IDC) compared to the invasive lobular carcinoma (ILC) the two major pathological types of breast cancer. www.broad.mit.e...
Broad WINNEPENNINCKX_MELANOMA_METASTASIS_DN View Gene Set 0.0003199 46 0.01109 69 Genes from the 254-gene classifier which were down-regulated in melanoma patients with a reported distant metastasis within 4 years. www.broad.mit.e...
Broad VALK_AML_CLUSTER_9 View Gene Set 0.0003299 35 0.01127 70 Top 40 genes from cluster 9 of acute myeloid leukemia (AML) expression profile; 87% of the samples are FAB M4 or M5 subtype all have inv(16) inversion producing the CBFB-MYH11 fusion [Gene ID=865 4629]; indicate good survival. www.broad.mit.e...
Broad ODONNELL_TARGETS_OF_MYC_AND_TFRC_UP View Gene Set 0.000353 78 0.01189 71 Genes up-regulated in P493-6 cells (B lymphocyte) by MYC [Gene ID=4609] and down-regulated by RNAi knockdown of TFRC [Gene ID=7037]. www.broad.mit.e...
Broad BROWNE_HCMV_INFECTION_48HR_DN View Gene Set 0.0004027 484 0.01338 72 Genes down-regulated in primary fibroblast cell culture after infection with HCMV (AD169 strain) at 48 h time point that were not down-regulated at the previous time point 24 h. www.broad.mit.e...
Broad VERRECCHIA_RESPONSE_TO_TGFB1_C2 View Gene Set 0.000411 19 0.01347 73 Cluster 2: ECM related genes up-regulated in dermal fibroblasts within 30 min after TGFB1 [Gene ID=7040] addition; reached a plateau after that. www.broad.mit.e...
Broad HANN_RESISTANCE_TO_BCL2_INHIBITOR_UP View Gene Set 0.0004289 34 0.01368 74 Genes up-regulated in SCLC (small cell lung cancer) cells with acquired resistance to ABT-737 [PubChem=11228183] an inhibitor of the BCL2 [Gene ID=596] family proteins. www.broad.mit.e...
Broad BAELDE_DIABETIC_NEPHROPATHY_UP View Gene Set 0.0004241 32 0.01368 74 Top 50 up-regulated genes in glomeruli from kidneys with diabetic nephropathy (type 2 diabetes mellitus). www.broad.mit.e...
Broad LENAOUR_DENDRITIC_CELL_MATURATION_UP View Gene Set 0.0004963 92 0.01562 76 Genes up-regulated during in vitro maturation of CD14+ [Gene ID=929] monocytes (day 0) into immature (day 7) and mature dendritic cells (day 14). www.broad.mit.e...
Broad KONDO_PROSTATE_CANCER_WITH_H3K27ME3 View Gene Set 0.0005117 187 0.01583 77 Top 200 genes with high histone H3 trimethylation mark at K27 (H3K27me3) in PC3 cells (prostate cancer) by ChIP-chip assay on an 88K microarray (all promoters). www.broad.mit.e...
Broad FONTAINE_PAPILLARY_THYROID_CARCINOMA_DN View Gene Set 0.0005161 68 0.01583 77 Genes down-regulated in papillary thyroid carcinoma (PTC) compared to other thyroid tumors. www.broad.mit.e...
Broad BASSO_CD40_SIGNALING_DN View Gene Set 0.0005458 66 0.01653 79 Gene changed by CD40 [Gene ID=958] signaling in Ramos cells (EBV negative Burkitt lymphoma). www.broad.mit.e...
Broad WINTER_HYPOXIA_DN View Gene Set 0.0005714 46 0.01695 80 Genes down-regulated in head and neck tumor samples which clustered around known hypoxia genes. www.broad.mit.e...
Broad KANG_IMMORTALIZED_BY_TERT_DN View Gene Set 0.0005738 102 0.01695 80 Down-regulated genes in the signature of adipose stromal cells (ADSC) immortalized by forced expression of telomerase (TERT) [Gene ID=7015]. www.broad.mit.e...
Broad OUELLET_CULTURED_OVARIAN_CANCER_INVASIVE_VS_LMP_DN View Gene Set 0.0006117 34 0.01763 82 Genes down-regulated in pirmary cultures of epithelial ovarian cancer (EOC): invasive (TOV) vs low malignant potential (LMP) tumors. www.broad.mit.e...
Broad WU_ALZHEIMER_DISEASE_DN View Gene Set 0.0006046 14 0.01763 82 Genes down-regulated in brain endothelial cells from patients with Alzheimer disease. www.broad.mit.e...
Broad SMID_BREAST_CANCER_LUMINAL_B_UP View Gene Set 0.0006256 162 0.01781 84 Genes up-regulated in the luminal B subtype of breast cancer. www.broad.mit.e...
Broad ICHIBA_GRAFT_VERSUS_HOST_DISEASE_35D_UP View Gene Set 0.0006544 121 0.01842 85 Hepatic graft versus host disease (GVHD) day 35: genes up-regulated in allogeneic vs syngeneic bone marrow transplant. www.broad.mit.e...
Broad MCLACHLAN_DENTAL_CARIES_UP View Gene Set 0.0006841 207 0.01903 86 Genes up-regulated in pulpal tissue extracted from carious teeth. www.broad.mit.e...
Broad LIN_APC_TARGETS View Gene Set 0.0007011 52 0.01928 87 Genes up-regulated by forced expression of APC [Gene ID=324] in the APC-deficient SW480 cell line (colon cancer). www.broad.mit.e...
Broad URS_ADIPOCYTE_DIFFERENTIATION_DN View Gene Set 0.0007319 30 0.01989 88 Genes down-regulated in primary adipocytes compared to preadipocytes. www.broad.mit.e...
Broad HAHTOLA_SEZARY_SYNDROM_DN View Gene Set 0.0007499 42 0.02015 89 Genes down-regulated in monocytes isolated from peripheral blood samples of Sezary syndrom patients compared to those from healthy normal donors. www.broad.mit.e...
Broad ZHANG_INTERFERON_RESPONSE View Gene Set 0.0007858 21 0.02074 90 Interferon-inducible genes up-regulated in A549 cells (lung cancer) infected with a respiratory syncytial virus (RSV) that had its NS1 [Gene ID=1494468] gene knocked down by RNAi. www.broad.mit.e...
Broad CHIANG_LIVER_CANCER_SUBCLASS_PROLIFERATION_DN View Gene Set 0.000789 154 0.02074 90 Top 200 marker genes down-regulated in the 'proliferation' subclass of hepatocellular carcinoma (HCC); characterized by increased proliferation high levels of serum AFP [Gene ID=174] and chromosomal instability. www.broad.mit.e...
Broad TAKEDA_TARGETS_OF_NUP98_HOXA9_FUSION_16D_UP View Gene Set 0.0008124 168 0.02112 92 Genes up-regulated in CD34+ [Gene ID=947] hematopoetic cells by expression of NUP98-HOXA9 fusion [Gene ID=4928 3205] off a retroviral vector at 16 days after transduction. www.broad.mit.e...
Broad MCLACHLAN_DENTAL_CARIES_DN View Gene Set 0.0008526 234 0.02147 93 Genes down-regulated in pulpal tissue extracted from carious teeth. www.broad.mit.e...
Broad VERRECCHIA_DELAYED_RESPONSE_TO_TGFB1 View Gene Set 0.0008408 36 0.02147 93 ECM related genes up-regulated later than 30 min following addition of TGFB1 [Gene ID=7040] in dermal fibroblasts. www.broad.mit.e...
Broad LEE_LIVER_CANCER_SURVIVAL_UP View Gene Set 0.0008457 130 0.02147 93 Genes highly expressed in hepatocellular carcinoma with good survival. www.broad.mit.e...
Broad HAMAI_APOPTOSIS_VIA_TRAIL_DN View Gene Set 0.000872 125 0.02173 96 Genes down-regulated in T1 cells (primary melanoma sensitive to TRAIL [Gene ID=8743]) compared to G1 cells (metastatic melanoma resistant to TRAIL). www.broad.mit.e...
Broad GARY_CD5_TARGETS_UP View Gene Set 0.0008876 463 0.02189 97 Genes up-regulated in Daudi cells (B lymphocytes) stably expressing CD5 [Gene ID=921] off a plasmid vector. www.broad.mit.e...
Broad ACEVEDO_METHYLATED_IN_LIVER_CANCER_DN View Gene Set 0.0008978 882 0.02191 98 Genes whose DNA is hyper-methylated in hepatocellular carcinoma (HCC) compared to normal liver. www.broad.mit.e...
Broad BARRIER_COLON_CANCER_RECURRENCE_DN View Gene Set 0.0009549 19 0.02298 99 Down-regulated genes from the 70-gene prognosis predictor for stage 2 colon cancer based on non-neoplastic mucosa gene expression profiles. www.broad.mit.e...
Broad BOYAULT_LIVER_CANCER_SUBCLASS_G3_DN View Gene Set 0.0009606 51 0.02298 99 Down-regulated genes in hepatocellular carcinoma (HCC) subclass G3 defined by unsupervised clustering. www.broad.mit.e...
Broad ZHOU_INFLAMMATORY_RESPONSE_FIMA_UP View Gene Set 0.001 502 0.02369 101 Genes up-regulated in macrophages by P.gingivalis FimA pathogen. www.broad.mit.e...
Broad KLEIN_TARGETS_OF_BCR_ABL1_FUSION View Gene Set 0.001017 31 0.02386 102 Genes changed in pre-B lymphoblastic leukemia cells with BCR-ABL1 fusion [Gene ID=613 25] vs normal pre-B lymphocytes. www.broad.mit.e...
Broad STEARMAN_TUMOR_FIELD_EFFECT_UP View Gene Set 0.001037 33 0.0239 103 Up-regulated genes in the 'Field Effect' signature of normal lung tissue adjacent to the tumor. www.broad.mit.e...
Broad VALK_AML_CLUSTER_7 View Gene Set 0.001039 26 0.0239 103 Top 40 genes from cluster 7 of acute myeloid leukemia (AML) expression profile; 61% of the samples are FAB M1 or M2 subtype. www.broad.mit.e...
Broad RICKMAN_HEAD_AND_NECK_CANCER_A View Gene Set 0.001128 91 0.02569 105 Cluster a: genes identifying an intrinsic group in head and neck squamous cell carcinoma (HNSCC). www.broad.mit.e...
Broad GRAHAM_CML_QUIESCENT_VS_NORMAL_DIVIDING_DN View Gene Set 0.001306 11 0.02919 106 Genes down-regulated in quescent CD34+ [Gene ID=8842] cells isolated from peripheral blood of CML (chronic myeloblastic leukemia) patients compared to the dividing cells from normal donors. www.broad.mit.e...
Broad ROSS_AML_WITH_PML_RARA_FUSION View Gene Set 0.001304 74 0.02919 106 Top 100 probe sets for pediatric acute myeloid leukemia (AML) subtype t(15;17): has PML RARA fusion [Gene ID=5371 5914]. www.broad.mit.e...
Broad ZHAN_MULTIPLE_MYELOMA_CD2_UP View Gene Set 0.001424 42 0.03154 108 Top 50 up-regulated genes in cluster CD-2 of multiple myeloma samples with the characteristic expression spike of CCND3 [Gene ID=896]. www.broad.mit.e...
Broad SAKAI_CHRONIC_HEPATITIS_VS_LIVER_CANCER_DN View Gene Set 0.001495 35 0.03216 109 Selected genes down-regulated in peripheral blood monocytes (PBMC) of patients with hepatocellular carcinoma (HCC) compared to those with chronic hepatitis. www.broad.mit.e...
Broad POOLA_INVASIVE_BREAST_CANCER_DN View Gene Set 0.00147 130 0.03216 109 Genes down-regulated in atypical ductal hyperplastic tissues from patients with (ADHC) breast cancer vs those without the cancer (ADH). www.broad.mit.e...
Broad MARSON_FOXP3_TARGETS_UP View Gene Set 0.001506 54 0.03216 109 Genes up-regulated by FOXP3 [Gene ID=50943] in both ex vivo and hybridoma cells. www.broad.mit.e...
Broad RAMALHO_STEMNESS_DN View Gene Set 0.001481 68 0.03216 109 Genes depleted in embryonic neural and hematopoietic stem cells. www.broad.mit.e...
Broad LUI_THYROID_CANCER_CLUSTER_4 View Gene Set 0.001553 14 0.03288 113 Cluster 4: genes with similar expression profiles across follicular thyroid carcinoma (FTC) samples. www.broad.mit.e...
Broad CADWELL_ATG16L1_TARGETS_UP View Gene Set 0.001597 83 0.03332 114 Genes up-regulated in Paneth cell (part of intestiinal epithelium) of mice with hypomorphic (reduced function) form of ATG16L1 [Gene ID=55054]. www.broad.mit.e...
Broad VERRECCHIA_EARLY_RESPONSE_TO_TGFB1 View Gene Set 0.001602 51 0.03332 114 ECM related genes up-regulated early (within 30 min) in dermal fibroblasts after addition of TGFB1 [Gene ID=7040]. www.broad.mit.e...
Broad MORI_LARGE_PRE_BII_LYMPHOCYTE_DN View Gene Set 0.001643 45 0.03389 116 Down-regulated genes in the B lymphocyte developmental signature based on expression profiling of lymphomas from the Emu-myc transgenic mice: the Large Pre-BII stage. www.broad.mit.e...
Broad EBAUER_MYOGENIC_TARGETS_OF_PAX3_FOXO1_FUSION View Gene Set 0.001745 50 0.03567 117 Muscle development genes up-regulated in Rh4 cells (alveolar rhabdomyosarcoma ARMS) but not in the RD cells (embryonal rhabdomyosarcoma ERMS) after knockdown of PAX3-FOXO1 [Gene ID=5077 2308] fusion by RNAi for 72 hr. www.broad.mit.e...
Broad BOYAULT_LIVER_CANCER_SUBCLASS_G23_DN View Gene Set 0.001797 10 0.03643 118 Down-regulated genes in hepatocellular carcinoma (HCC) subclass G23 defined by unsupervised clustering. www.broad.mit.e...
Broad RICKMAN_HEAD_AND_NECK_CANCER_E View Gene Set 0.002049 83 0.0412 119 Cluster e: genes identifying an intrinsic group in head and neck squamous cell carcinoma (HNSCC). www.broad.mit.e...
Broad GAUSSMANN_MLL_AF4_FUSION_TARGETS_D_UP View Gene Set 0.00214 30 0.04266 120 Up-regulated genes from the set D (Fig. 5a): specific signature shared by cells expressing MLL-AF4 [Gene ID=4297 4299] alone and those expressing both MLL-AF4 and AF4-MLL fusion proteins. www.broad.mit.e...
Broad TANG_SENESCENCE_TP53_TARGETS_UP View Gene Set 0.002166 25 0.04281 121 Genes up-regulated in WI-38 cells (senescent primary fibroblasts) after inactivation of TP53 [Gene ID=7157] by GSE56 polypeptide. www.broad.mit.e...
Broad GAUSSMANN_MLL_AF4_FUSION_TARGETS_G_UP View Gene Set 0.002194 157 0.04302 122 Up-regulated genes from the set G (Fig. 5a): specific to cells expressing both MLL-AF4 [Gene ID=4297 4299] and AF4-MLL fusion proteins. www.broad.mit.e...
Broad SCHUETZ_BREAST_CANCER_DUCTAL_INVASIVE_UP View Gene Set 0.002267 339 0.04329 123 Genes up-regulated in invasive ductal carcinoma (IDC) relative to ductal carcinoma in situ (DCIS non-invasive). www.broad.mit.e...
Broad DELYS_THYROID_CANCER_UP View Gene Set 0.002278 397 0.04329 123 Genes up-regulated in papillary thyroid carcinoma (PTC) compared to normal tissue. www.broad.mit.e...
Broad SHIPP_DLBCL_CURED_VS_FATAL_UP View Gene Set 0.002329 38 0.04329 123 Top 50 up-regulated markers for the diffused large B-cell lymphoma (DLBCL) that distinguished between cured and fatal/refractory clinical outcomes. www.broad.mit.e...
Broad WIELAND_UP_BY_HBV_INFECTION View Gene Set 0.002329 98 0.04329 123 Genes induced in the liver during hepatitis B (HBV) viral clearance in chimpanzees. www.broad.mit.e...
Broad GAURNIER_PSMD4_TARGETS View Gene Set 0.002335 59 0.04329 123 Inflammatory cytokines chemokines and their cognate receptors up-regulated in THP-1 cells (monocyte) after treatment with PSMD4 [Gene ID=5710]. www.broad.mit.e...
Broad VART_KSHV_INFECTION_ANGIOGENIC_MARKERS_DN View Gene Set 0.002259 134 0.04329 123 Angiogenic markers down-regulated in lymph endothelial cells upon infection with KSHV (Kaposi's sarcoma herpes virus). www.broad.mit.e...
Broad CUI_TCF21_TARGETS_UP View Gene Set 0.00229 36 0.04329 123 Genes most strongly up-regulated in kidney glomeruli isolated from TCF21 [Gene ID=6943] knockout mice. www.broad.mit.e...
Broad SMID_BREAST_CANCER_LUMINAL_A_UP View Gene Set 0.002369 79 0.04358 130 Genes up-regulated in the luminal A subtype of breast cancer. www.broad.mit.e...
Broad MULLIGHAN_MLL_SIGNATURE_1_DN View Gene Set 0.002463 228 0.0449 131 The 'MLL signature 1': genes down-regulated in pediatric AML (acute myeloid leukemia) with rearranged MLL [Gene ID=4297] compared to all AML cases with the intact gene. www.broad.mit.e...
Broad SATO_SILENCED_BY_METHYLATION_IN_PANCREATIC_CANCER_2 View Gene Set 0.002478 48 0.0449 131 50 most interesting genes up-regulated in the pancreatic cancer cell lines (AsPC1 Hs766T MiaPaCa2 Panc1) but not in the non-neoplastic cells (HPDE) by decitabine (5-aza-2'-deoxycytidine) [PubChem=451668]. www.broad.mit.e...
Broad SANA_RESPONSE_TO_IFNG_UP View Gene Set 0.002617 68 0.04707 133 Genes up-regulated in five primary endothelial cell types (lung aortic iliac dermal and colon) by IFNG [Gene ID=3458]. www.broad.mit.e...
Broad KIM_LRRC3B_TARGETS View Gene Set 0.002645 30 0.04722 134 Immune response genes up-regulated in zenograft tumors formed by SNU-601 cells (gastric cancer) made to express LRRC3B [Gene ID=116135]. www.broad.mit.e...
Broad CHIBA_RESPONSE_TO_TSA_UP View Gene Set 0.002712 43 0.04806 135 Cancer related genes up-regulated in any of four hepatoma cell lines following 24 h treatment with TSA [PubChem=5562]. www.broad.mit.e...
Broad WEST_ADRENOCORTICAL_TUMOR_MARKERS_DN View Gene Set 0.002768 20 0.04833 136 Top down-regulated genes in pediatric adrenocortical tumors (ACT) compared to the normal tissue. www.broad.mit.e...
Broad WANG_ESOPHAGUS_CANCER_VS_NORMAL_UP View Gene Set 0.002765 110 0.04833 136 Genes specific to esophageal adenocarcinoma (EAC) relative to normal tissue. www.broad.mit.e...
Broad ZHOU_INFLAMMATORY_RESPONSE_LPS_UP View Gene Set 0.002849 400 0.04939 138 Genes up-regulated in macrophages by P.gingivalis LPS (lipopolysaccharide). www.broad.mit.e...

Gene Set Collection: Broad.c2.CP

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad ST_WNT_CA2_CYCLIC_GMP_PATHWAY View Gene Set 0.0001406 19 0.006609 1 Wnt/Ca2+/cyclic GMP signaling. www.broad.mit.e...
Broad ST_GA12_PATHWAY View Gene Set 0.00168 23 0.02621 2 G alpha 12 Pathway www.broad.mit.e...
Broad SIG_CHEMOTAXIS View Gene Set 0.00153 44 0.02621 2 Genes related to chemotaxis www.broad.mit.e...
Broad SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES View Gene Set 0.003346 35 0.02621 2 Genes related to regulation of the actin cytoskeleton www.broad.mit.e...
Broad ST_INTEGRIN_SIGNALING_PATHWAY View Gene Set 0.002842 78 0.02621 2 Integrin Signaling Pathway www.broad.mit.e...
Broad SIG_BCR_SIGNALING_PATHWAY View Gene Set 0.002413 46 0.02621 2 Members of the BCR signaling pathway www.broad.mit.e...
Broad ST_GAQ_PATHWAY View Gene Set 0.005509 27 0.03574 7 G alpha q Pathway www.broad.mit.e...
Broad SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES View Gene Set 0.006084 34 0.03574 7 Genes related to PIP3 signaling in B lymphocytes www.broad.mit.e...

Gene Set Collection: Broad.c2.CP.BIOCARTA

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad BIOCARTA_BAD_PATHWAY View Gene Set 0.0002626 26 0.02969 1 Regulation of BAD phosphorylation www.broad.mit.e...
Broad BIOCARTA_TCYTOTOXIC_PATHWAY View Gene Set 0.0002736 14 0.02969 1 T Cytotoxic Cell Surface Molecules www.broad.mit.e...
Broad BIOCARTA_THELPER_PATHWAY View Gene Set 0.0005703 14 0.04125 3 T Helper Cell Surface Molecules www.broad.mit.e...
Broad BIOCARTA_RHO_PATHWAY View Gene Set 0.0008 32 0.0434 4 Rho cell motility signaling pathway www.broad.mit.e...
Broad BIOCARTA_RANKL_PATHWAY View Gene Set 0.002302 14 0.04767 5 Bone Remodelling www.broad.mit.e...
Broad BIOCARTA_CTL_PATHWAY View Gene Set 0.001554 15 0.04767 5 CTL mediated immune response against target cells www.broad.mit.e...
Broad BIOCARTA_TCAPOPTOSIS_PATHWAY View Gene Set 0.002636 11 0.04767 5 HIV Induced T Cell Apoptosis www.broad.mit.e...
Broad BIOCARTA_IL2RB_PATHWAY View Gene Set 0.001855 38 0.04767 5 IL-2 Receptor Beta Chain in T cell Activation www.broad.mit.e...
Broad BIOCARTA_IL22BP_PATHWAY View Gene Set 0.00243 16 0.04767 5 IL22 Soluble Receptor Signaling Pathway www.broad.mit.e...
Broad BIOCARTA_NO2IL12_PATHWAY View Gene Set 0.001325 17 0.04767 5 NO2-dependent IL 12 Pathway in NK cells www.broad.mit.e...
Broad BIOCARTA_NKT_PATHWAY View Gene Set 0.001362 28 0.04767 5 Selective expression of chemokine receptors during T-cell polarization www.broad.mit.e...
Broad BIOCARTA_STATHMIN_PATHWAY View Gene Set 0.002386 19 0.04767 5 Stathmin and breast cancer resistance to antimicrotubule agents www.broad.mit.e...

Gene Set Collection: Broad.c2.CP.KEGG

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION View Gene Set 1.559e-16 272 2.901e-14 1 Neuroactive ligand-receptor interaction www.broad.mit.e...
Broad KEGG_CELL_ADHESION_MOLECULES_CAMS View Gene Set 2.946e-11 134 2.74e-09 2 Cell adhesion molecules (CAMs) www.broad.mit.e...
Broad KEGG_CALCIUM_SIGNALING_PATHWAY View Gene Set 4.096e-09 178 2.54e-07 3 Calcium signaling pathway www.broad.mit.e...
Broad KEGG_HEMATOPOIETIC_CELL_LINEAGE View Gene Set 1.039e-08 88 4.831e-07 4 Hematopoietic cell lineage www.broad.mit.e...
Broad KEGG_NATURAL_KILLER_CELL_MEDIATED_CYTOTOXICITY View Gene Set 2.35e-06 137 7.286e-05 5 Natural killer cell mediated cytotoxicity www.broad.mit.e...
Broad KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM View Gene Set 2.302e-06 85 7.286e-05 5 Hypertrophic cardiomyopathy (HCM) www.broad.mit.e...
Broad KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION View Gene Set 3.925e-06 267 0.0001043 7 Cytokine-cytokine receptor interaction www.broad.mit.e...
Broad KEGG_DILATED_CARDIOMYOPATHY View Gene Set 7.565e-06 92 0.0001759 8 Dilated cardiomyopathy www.broad.mit.e...
Broad KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC View Gene Set 1.084e-05 76 0.0002239 9 Arrhythmogenic right ventricular cardiomyopathy (ARVC) www.broad.mit.e...
Broad KEGG_GRAFT_VERSUS_HOST_DISEASE View Gene Set 1.314e-05 42 0.0002444 10 Graft-versus-host disease www.broad.mit.e...
Broad KEGG_ANTIGEN_PROCESSING_AND_PRESENTATION View Gene Set 1.811e-05 89 0.0003062 11 Antigen processing and presentation www.broad.mit.e...
Broad KEGG_FOCAL_ADHESION View Gene Set 7.774e-05 201 0.001155 12 Focal adhesion www.broad.mit.e...
Broad KEGG_REGULATION_OF_ACTIN_CYTOSKELETON View Gene Set 8.075e-05 216 0.001155 12 Regulation of actin cytoskeleton www.broad.mit.e...
Broad KEGG_CHEMOKINE_SIGNALING_PATHWAY View Gene Set 0.0001196 190 0.001588 14 Chemokine signaling pathway www.broad.mit.e...
Broad KEGG_PRIMARY_IMMUNODEFICIENCY View Gene Set 0.0001869 35 0.002318 15 Primary immunodeficiency www.broad.mit.e...
Broad KEGG_AUTOIMMUNE_THYROID_DISEASE View Gene Set 0.0002153 53 0.002503 16 Autoimmune thyroid disease www.broad.mit.e...
Broad KEGG_ECM_RECEPTOR_INTERACTION View Gene Set 0.000269 84 0.00278 17 ECM-receptor interaction www.broad.mit.e...
Broad KEGG_ALLOGRAFT_REJECTION View Gene Set 0.0002615 38 0.00278 17 Allograft rejection www.broad.mit.e...
Broad KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION View Gene Set 0.000303 118 0.002929 19 Leukocyte transendothelial migration www.broad.mit.e...
Broad KEGG_TYPE_I_DIABETES_MELLITUS View Gene Set 0.0003149 44 0.002929 19 Type I diabetes mellitus www.broad.mit.e...
Broad KEGG_ARACHIDONIC_ACID_METABOLISM View Gene Set 0.0004515 58 0.003999 21 Arachidonic acid metabolism www.broad.mit.e...
Broad KEGG_ASTHMA View Gene Set 0.0005399 30 0.004565 22 Asthma www.broad.mit.e...
Broad KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION View Gene Set 0.000675 48 0.005459 23 Intestinal immune network for IgA production www.broad.mit.e...
Broad KEGG_AXON_GUIDANCE View Gene Set 0.0008486 129 0.006577 24 Axon guidance www.broad.mit.e...
Broad KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION View Gene Set 0.0008844 115 0.00658 25 Vascular smooth muscle contraction www.broad.mit.e...
Broad KEGG_BASAL_CELL_CARCINOMA View Gene Set 0.001065 55 0.00762 26 Basal cell carcinoma www.broad.mit.e...
Broad KEGG_GLIOMA View Gene Set 0.001162 65 0.008002 27 Glioma www.broad.mit.e...
Broad KEGG_PATHWAYS_IN_CANCER View Gene Set 0.002725 328 0.0181 28 Pathways in cancer www.broad.mit.e...
Broad KEGG_JAK_STAT_SIGNALING_PATHWAY View Gene Set 0.003239 155 0.02008 29 Jak-STAT signaling pathway www.broad.mit.e...
Broad KEGG_GNRH_SIGNALING_PATHWAY View Gene Set 0.00321 101 0.02008 29 GnRH signaling pathway www.broad.mit.e...
Broad KEGG_TYPE_II_DIABETES_MELLITUS View Gene Set 0.003958 47 0.02375 31 Type II diabetes mellitus www.broad.mit.e...
Broad KEGG_TASTE_TRANSDUCTION View Gene Set 0.004608 52 0.02678 32 Taste transduction www.broad.mit.e...
Broad KEGG_NITROGEN_METABOLISM View Gene Set 0.005713 23 0.0308 33 Nitrogen metabolism www.broad.mit.e...
Broad KEGG_VEGF_SIGNALING_PATHWAY View Gene Set 0.005795 76 0.0308 33 VEGF signaling pathway www.broad.mit.e...
Broad KEGG_OLFACTORY_TRANSDUCTION View Gene Set 0.005527 389 0.0308 33 Olfactory transduction www.broad.mit.e...
Broad KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM View Gene Set 0.005972 76 0.03085 36 Phosphatidylinositol signaling system www.broad.mit.e...
Broad KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS View Gene Set 0.006635 97 0.03335 37 Fc gamma R-mediated phagocytosis www.broad.mit.e...
Broad KEGG_GLYCEROPHOSPHOLIPID_METABOLISM View Gene Set 0.007201 76 0.03525 38 Glycerophospholipid metabolism www.broad.mit.e...
Broad KEGG_VIRAL_MYOCARDITIS View Gene Set 0.008173 73 0.03898 39 Viral myocarditis www.broad.mit.e...
Broad KEGG_ACUTE_MYELOID_LEUKEMIA View Gene Set 0.009898 60 0.04603 40 Acute myeloid leukemia www.broad.mit.e...
Broad KEGG_MELANOGENESIS View Gene Set 0.01083 102 0.04915 41 Melanogenesis www.broad.mit.e...

Gene Set Collection: Broad.c2.CP.REACTOME

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad REACTOME_DOWNSTREAM_EVENTS_IN_GPCR_SIGNALING View Gene Set 1.95e-15 448 4.192e-13 1 Genes involved in Downstream events in GPCR signaling www.broad.mit.e...
Broad REACTOME_GPCR_LIGAND_BINDING View Gene Set 1.914e-15 392 4.192e-13 1 Genes involved in GPCR ligand binding www.broad.mit.e...
Broad REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS View Gene Set 1.026e-12 292 1.471e-10 3 Genes involved in Class A/1 (Rhodopsin-like receptors) www.broad.mit.e...
Broad REACTOME_SIGNALING_IN_IMMUNE_SYSTEM View Gene Set 7.766e-11 366 8.349e-09 4 Genes involved in Signaling in Immune system www.broad.mit.e...
Broad REACTOME_IMMUNOREGULATORY_INTERACTIONS_BETWEEN_A_LYMPHOID_AND_A_NON_LYMPHOID_CELL View Gene Set 5.631e-09 106 4.842e-07 5 Genes involved in Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell www.broad.mit.e...
Broad REACTOME_G_ALPHA_I_SIGNALLING_EVENTS View Gene Set 7.982e-08 177 5.714e-06 6 Genes involved in G alpha (i) signalling events www.broad.mit.e...
Broad REACTOME_TRANSMISSION_ACROSS_CHEMICAL_SYNAPSES View Gene Set 9.301e-08 130 5.714e-06 6 Genes involved in Transmission across Chemical Synapses www.broad.mit.e...
Broad REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS View Gene Set 2.074e-07 156 9.911e-06 8 Genes involved in G alpha (q) signalling events www.broad.mit.e...
Broad REACTOME_PEPTIDE_LIGAND_BINDING_RECEPTORS View Gene Set 1.905e-07 173 9.911e-06 8 Genes involved in Peptide ligand-binding receptors www.broad.mit.e...
Broad REACTOME_NEURORANSMITTER_RECEPTOR_BINDING_AND_DOWNSTREAM_TRANSMISSION_IN_THE_POSTSYNAPTIC_CELL View Gene Set 1.363e-05 84 0.0005557 10 Genes involved in Neuroransmitter Receptor Binding And Downstream Transmission In The Postsynaptic Cell www.broad.mit.e...
Broad REACTOME_RAS_ACTIVATION_UOPN_CA2_INFUX_THROUGH_NMDA_RECEPTOR View Gene Set 1.422e-05 18 0.0005557 10 Genes involved in Ras activation uopn Ca2+ infux through NMDA receptor www.broad.mit.e...
Broad REACTOME_NCAM1_INTERACTIONS View Gene Set 2.841e-05 43 0.001018 12 Genes involved in NCAM1 interactions www.broad.mit.e...
Broad REACTOME_CELL_SURFACE_INTERACTIONS_AT_THE_VASCULAR_WALL View Gene Set 3.615e-05 94 0.001196 13 Genes involved in Cell surface interactions at the vascular wall www.broad.mit.e...
Broad REACTOME_AXON_GUIDANCE View Gene Set 3.918e-05 160 0.001203 14 Genes involved in Axon guidance www.broad.mit.e...
Broad REACTOME_AMINE_LIGAND_BINDING_RECEPTORS View Gene Set 4.292e-05 42 0.00123 15 Genes involved in Amine ligand-binding receptors www.broad.mit.e...
Broad REACTOME_CREB_PHOPHORYLATION_THROUGH_THE_ACTIVATION_OF_RAS View Gene Set 4.849e-05 26 0.001303 16 Genes involved in CREB phophorylation through the activation of Ras www.broad.mit.e...
Broad REACTOME_SLC_MEDIATED_TRANSMEMBRANE_TRANSPORT View Gene Set 6.128e-05 169 0.001519 17 Genes involved in SLC-mediated transmembrane transport www.broad.mit.e...
Broad REACTOME_POST_NMDA_RECEPTOR_ACTIVATION_EVENTS View Gene Set 6.358e-05 32 0.001519 17 Genes involved in Post NMDA receptor activation events www.broad.mit.e...
Broad REACTOME_HEMOSTASIS View Gene Set 8.779e-05 274 0.001987 19 Genes involved in Hemostasis www.broad.mit.e...
Broad REACTOME_ACTIVATION_OF_NMDA_RECEPTOR_UPON_GLUTAMATE_BINDING_AND_POSTSYNAPTIC_EVENTS View Gene Set 0.0001334 36 0.002867 20 Genes involved in Activation of NMDA receptor upon glutamate binding and postsynaptic events www.broad.mit.e...
Broad REACTOME_TRANSLOCATION_OF_ZAP70_TO_IMMUNOLOGICAL_SYNAPSE View Gene Set 0.0001654 24 0.003387 21 Genes involved in Translocation of ZAP-70 to Immunological synapse www.broad.mit.e...
Broad REACTOME_INORGANIC_CATION_ANION_SLC_TRANSPORTERS View Gene Set 0.000198 94 0.00387 22 Genes involved in Inorganic cation/anion SLC transporters www.broad.mit.e...
Broad REACTOME_CREB_PHOSPHORYLATION_THROUGH_THE_ACTIVATION_OF_CAMKII View Gene Set 0.0003428 16 0.006408 23 Genes involved in CREB phosphorylation through the activation of CaMKII www.broad.mit.e...
Broad REACTOME_PHOSPHORYLATION_OF_CD3_AND_TCR_ZETA_CHAINS View Gene Set 0.0005977 26 0.01071 24 Genes involved in Phosphorylation of CD3 and TCR zeta chains www.broad.mit.e...
Broad REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH View Gene Set 0.0006758 68 0.01162 25 Genes involved in NCAM signaling for neurite out-growth www.broad.mit.e...
Broad REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES View Gene Set 0.000868 37 0.01436 26 Genes involved in Generation of second messenger molecules www.broad.mit.e...
Broad REACTOME_G_ALPHA_S_SIGNALLING_EVENTS View Gene Set 0.001359 126 0.02086 27 Genes involved in G alpha (s) signalling events www.broad.mit.e...
Broad REACTOME_PHASE_1_FUNCTIONALIZATION View Gene Set 0.001345 15 0.02086 27 Genes involved in Phase 1 functionalization www.broad.mit.e...
Broad REACTOME_CLASS_B2_SECRETIN_FAMILY_RECEPTORS View Gene Set 0.001419 85 0.02104 29 Genes involved in Class B/2 (Secretin family receptors) www.broad.mit.e...
Broad REACTOME_PD1_SIGNALING View Gene Set 0.001587 29 0.02275 30 Genes involved in PD-1 signaling www.broad.mit.e...
Broad REACTOME_CELL_CELL_ADHESION_SYSTEMS View Gene Set 0.00171 59 0.02372 31 Genes involved in Cell-cell adhesion systems www.broad.mit.e...
Broad REACTOME_GLYCOLYSIS View Gene Set 0.001889 22 0.02504 32 Genes involved in Glycolysis www.broad.mit.e...
Broad REACTOME_MUSCLE_CONTRACTION View Gene Set 0.001922 51 0.02504 32 Genes involved in Muscle contraction www.broad.mit.e...
Broad REACTOME_NUCLEAR_RECEPTOR_TRANSCRIPTION_PATHWAY View Gene Set 0.002324 50 0.02775 34 Genes involved in Nuclear Receptor transcription pathway www.broad.mit.e...
Broad REACTOME_PLATELET_ACTIVATION View Gene Set 0.002316 167 0.02775 34 Genes involved in Platelet Activation www.broad.mit.e...
Broad REACTOME_SEMAPHORIN_INTERACTIONS View Gene Set 0.002306 66 0.02775 34 Genes involved in Semaphorin interactions www.broad.mit.e...
Broad REACTOME_PLATELET_DEGRANULATION View Gene Set 0.002604 86 0.03026 37 Genes involved in Platelet degranulation www.broad.mit.e...
Broad REACTOME_BIOLOGICAL_OXIDATIONS View Gene Set 0.003068 127 0.03472 38 Genes involved in Biological oxidations www.broad.mit.e...
Broad REACTOME_CELL_JUNCTION_ORGANIZATION View Gene Set 0.003745 84 0.04129 39 Genes involved in Cell junction organization www.broad.mit.e...
Broad REACTOME_NEUROTRANSMITTER_RELEASE_CYCLE View Gene Set 0.003885 28 0.04176 40 Genes involved in Neurotransmitter Release Cycle www.broad.mit.e...
Broad REACTOME_OTHER_SEMAPHORIN_INTERACTIONS View Gene Set 0.004376 16 0.04589 41 Genes involved in Other semaphorin interactions www.broad.mit.e...

Gene Set Collection: Broad.c3.MIR

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad GGGGCCC MIR-296 View Gene Set 2.258e-06 61 0.0002495 1 Targets of MicroRNA GGGGCCC MIR-296 www.broad.mit.e... MIR-296...
Broad CCAGGGG MIR-331 View Gene Set 2.131e-06 83 0.0002495 1 Targets of MicroRNA CCAGGGG MIR-331 www.broad.mit.e... MIR-331...
Broad AGGGCAG MIR-18A View Gene Set 4.54e-05 116 0.003345 3 Targets of MicroRNA AGGGCAG MIR-18A www.broad.mit.e... MIR-18A...
Broad CCCAGAG MIR-326 View Gene Set 7.065e-05 130 0.003903 4 Targets of MicroRNA CCCAGAG MIR-326 www.broad.mit.e... MIR-326...
Broad GAGCCAG MIR-149 View Gene Set 0.0004414 125 0.01951 5 Targets of MicroRNA GAGCCAG MIR-149 www.broad.mit.e... MIR-149...

Gene Set Collection: Broad.c3.TFT

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad CAGGTG_V$E12_Q6 View Gene Set 1.56e-15 1818 9.595e-13 1 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif CAGGTG which matches annotation for TCF3: transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47) www.broad.mit.e...
Broad CAGCTG_V$AP4_Q5 View Gene Set 3.258e-13 1129 1.002e-10 2 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif CAGCTG which matches annotation for REPIN1: replication initiator 1 www.broad.mit.e...
Broad GGGAGGRR_V$MAZ_Q6 View Gene Set 2.693e-12 1701 4.249e-10 3 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GGGAGGRR which matches annotation for MAZ: MYC-associated zinc finger protein (purine-binding transcription factor) www.broad.mit.e...
Broad GGGTGGRR_V$PAX4_03 View Gene Set 2.764e-12 994 4.249e-10 3 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GGGTGGRR which matches annotation for PAX4: paired box gene 4 www.broad.mit.e...
Broad V$E12_Q6 View Gene Set 2.551e-08 191 3.138e-06 5 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif RRCAGGTGNCV which matches annotation for TCF3: transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47) www.broad.mit.e...
Broad V$GATA3_01 View Gene Set 6.613e-08 185 6.778e-06 6 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNGATARNG which matches annotation for GATA3: GATA binding protein 3 www.broad.mit.e...
Broad V$E2A_Q2 View Gene Set 1.63e-07 179 1.432e-05 7 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NCACCTGYYNCNKN which matches annotation for TCF3: transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47) www.broad.mit.e...
Broad GCANCTGNY_V$MYOD_Q6 View Gene Set 3.962e-07 673 3.046e-05 8 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GCANCTGNY which matches annotation for MYOD1: myogenic differentiation 1 www.broad.mit.e...
Broad GTGGGTGK_UNKNOWN View Gene Set 5.763e-07 224 3.938e-05 9 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif GTGGGTGK. Motif does not match any known transcription factor www.broad.mit.e...
Broad CTGCAGY_UNKNOWN View Gene Set 8.7e-07 570 4.864e-05 10 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif CTGCAGY. Motif does not match any known transcription factor www.broad.mit.e...
Broad TGGNNNNNNKCCAR_UNKNOWN View Gene Set 8.106e-07 314 4.864e-05 10 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif TGGNNNNNNKCCAR. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$MYOD_Q6_01 View Gene Set 1.106e-06 182 5.666e-05 12 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif CNGNRNCAGGTGNNGNAN which matches annotation for MYOD1: myogenic differentiation 1 www.broad.mit.e...
Broad V$GATA_C View Gene Set 1.326e-06 204 6.275e-05 13 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NGATAAGNMNN which matches annotation for GATA1: GATA binding protein 1 (globin transcription factor 1) www.broad.mit.e...
Broad V$AP4_01 View Gene Set 1.812e-06 190 7.958e-05 14 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif WGARYCAGCTGYGGNCNK which matches annotation for TFAP4: transcription factor AP-4 (activating enhancer binding protein 4) www.broad.mit.e...
Broad V$CP2_01 View Gene Set 2.376e-06 194 9.741e-05 15 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GCHCDAMCCAG which matches annotation for TFCP2: transcription factor CP2 www.broad.mit.e...
Broad V$VDR_Q3 View Gene Set 2.877e-06 172 0.0001106 16 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GGGKNARNRRGGWSA which matches annotation for VDR: vitamin D (1 25- dihydroxyvitamin D3) receptor www.broad.mit.e...
Broad V$AP4_Q6 View Gene Set 6.36e-06 170 0.0002301 17 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif CWCAGCTGGN which matches annotation for TFAP4: transcription factor AP-4 (activating enhancer binding protein 4) www.broad.mit.e...
Broad V$MYB_Q6 View Gene Set 8.13e-06 179 0.0002778 18 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNNAACTGNC which matches annotation for MYB: v-myb myeloblastosis viral oncogene homolog (avian) www.broad.mit.e...
Broad V$CACCCBINDINGFACTOR_Q6 View Gene Set 8.707e-06 203 0.0002813 19 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif CANCCNNWGGGTGDGG. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$AML_Q6 View Gene Set 9.147e-06 196 0.0002813 19 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNGKNTGTGGTTWNC which matches annotation for RUNX1: runt-related transcription factor 1 (acute myeloid leukemia 1; aml1 oncogene) www.broad.mit.e...
Broad V$NFKB_C View Gene Set 1.198e-05 209 0.0003366 21 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif NGGGACTTTCCA. Motif does not match any known transcription factor www.broad.mit.e...
Broad TGANTCA_V$AP1_C View Gene Set 1.259e-05 850 0.0003366 21 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TGANTCA which matches annotation for JUN: jun oncogene www.broad.mit.e...
Broad TGCCAAR_V$NF1_Q6 View Gene Set 1.255e-05 532 0.0003366 21 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TGCCAAR which matches annotation for NF1: neurofibromin 1 (neurofibromatosis von Recklinghausen disease Watson disease) www.broad.mit.e...
Broad V$AP4_Q5 View Gene Set 2.238e-05 206 0.0005736 24 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif VDCAGCTGNN which matches annotation for TFAP4: transcription factor AP-4 (activating enhancer binding protein 4) www.broad.mit.e...
Broad V$E47_01 View Gene Set 2.519e-05 201 0.0006024 25 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif VSNGCAGGTGKNCNN which matches annotation for TCF3: transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47) www.broad.mit.e...
Broad V$SREBP1_Q6 View Gene Set 2.547e-05 195 0.0006024 25 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif CACSCCA which matches annotation for SREBF1: sterol regulatory element binding transcription factor 1 www.broad.mit.e...
Broad V$CACBINDINGPROTEIN_Q6 View Gene Set 2.656e-05 175 0.0006051 27 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif GRGGSTGGG. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$STAT3_02 View Gene Set 2.98e-05 113 0.0006319 28 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNNTTCCN which matches annotation for STAT3: signal transducer and activator of transcription 3 (acute-phase response factor) www.broad.mit.e...
Broad V$FXR_IR1_Q6 View Gene Set 2.923e-05 85 0.0006319 28 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GGGTBAATRACCY which matches annotation for RXRA: retinoid X receptor alpha www.broad.mit.e...
Broad V$PAX4_03 View Gene Set 4.157e-05 200 0.0008456 30 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNNNNYCACCCB which matches annotation for PAX4: paired box gene 4 www.broad.mit.e...
Broad V$RP58_01 View Gene Set 4.262e-05 179 0.0008456 30 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNAACATCTGGA which matches annotation for ZNF238: zinc finger protein 238 www.broad.mit.e...
Broad TGTTTGY_V$HNF3_Q6 View Gene Set 5.022e-05 560 0.0009652 32 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TGTTTGY which matches annotation for FOXA1: forkhead box A1 www.broad.mit.e...
Broad TTCYNRGAA_V$STAT5B_01 View Gene Set 5.775e-05 247 0.001076 33 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TTCYNRGAA which matches annotation for STAT5B: signal transducer and activator of transcription 5B www.broad.mit.e...
Broad V$AP1_Q6_01 View Gene Set 6.051e-05 201 0.001095 34 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NTGACTCAN which matches annotation for JUN: jun oncogene www.broad.mit.e...
Broad YATGNWAAT_V$OCT_C View Gene Set 6.232e-05 289 0.001095 35 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif YATGNWAAT. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$AP1FJ_Q2 View Gene Set 7.912e-05 223 0.001352 36 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif RSTGACTNMNW which matches annotation for JUN: jun oncogene www.broad.mit.e...
Broad V$MZF1_01 View Gene Set 8.608e-05 179 0.001357 37 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif NGNGGGGA. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$MYOD_Q6 View Gene Set 8.529e-05 187 0.001357 37 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNCACCTGNY which matches annotation for MYOD1: myogenic differentiation 1 www.broad.mit.e...
Broad GATAAGR_V$GATA_C View Gene Set 8.368e-05 232 0.001357 37 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif GATAAGR. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$MYB_Q5_01 View Gene Set 9.142e-05 186 0.001406 40 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NAACNGNCN which matches annotation for MYB: v-myb myeloblastosis viral oncogene homolog (avian) www.broad.mit.e...
Broad V$S8_01 View Gene Set 0.0001014 195 0.001499 41 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif WNNANYYAATTANCNN which matches annotation for PRRX2: paired related homeobox 2 www.broad.mit.e...
Broad RYTTCCTG_V$ETS2_B View Gene Set 0.0001024 809 0.001499 41 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif RYTTCCTG which matches annotation for ETS2: v-ets erythroblastosis virus E26 oncogene homolog 2 (avian) www.broad.mit.e...
Broad V$OLF1_01 View Gene Set 0.000124 199 0.001774 43 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNCDABTCCCYAGRGARBNKGN which matches annotation for OLF1<br> OR5I1: olfactory receptor family 5 subfamily I member 1 www.broad.mit.e...
Broad V$LMO2COM_02 View Gene Set 0.0001304 194 0.001794 44 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NMGATANSG which matches annotation for LMO2: LIM domain only 2 (rhombotin-like 1) www.broad.mit.e...
Broad V$AR_01 View Gene Set 0.0001312 106 0.001794 44 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GGTACANNRTGTTCT which matches annotation for AR: androgen receptor (dihydrotestosterone receptor; testicular feminization; spinal and bulbar muscular atrophy; Kennedy disease) www.broad.mit.e...
Broad V$NRSF_01 View Gene Set 0.0001406 76 0.001852 46 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TTCAGCACCACGGACAGMGCC which matches annotation for REST: RE1-silencing transcription factor www.broad.mit.e...
Broad TGGAAA_V$NFAT_Q4_01 View Gene Set 0.0001415 1403 0.001852 46 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TGGAAA which matches annotation for NFAT<br> NFATC www.broad.mit.e...
Broad V$ZIC1_01 View Gene Set 0.0001505 201 0.001929 48 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif KGGGTGGTC which matches annotation for ZIC1: Zic family member 1 (odd-paired homolog Drosophila) www.broad.mit.e...
Broad V$E47_02 View Gene Set 0.0001986 188 0.002493 49 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNNMRCAGGTGTTMNN which matches annotation for TCF3: transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47) www.broad.mit.e...
Broad YWATTWNNRGCT_UNKNOWN View Gene Set 0.0002101 50 0.002584 50 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif YWATTWNNRGCT. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$MYOD_01 View Gene Set 0.0002207 187 0.002636 51 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif SRACAGGTGKYG which matches annotation for MYOD1: myogenic differentiation 1 www.broad.mit.e...
Broad V$SPZ1_01 View Gene Set 0.0002234 189 0.002636 51 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif DNNGGRGGGWWNNNN which matches annotation for SPZ1: spermatogenic leucine zipper 1 www.broad.mit.e...
Broad V$GATA_Q6 View Gene Set 0.0002272 159 0.002636 51 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif WGATARN which matches annotation for GATA1: GATA binding protein 1 (globin transcription factor 1) www.broad.mit.e...
Broad V$SRF_Q6 View Gene Set 0.0002637 209 0.003004 54 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GNCCAWATAWGGMN which matches annotation for SRF: serum response factor (c-fos serum response element-binding transcription factor) www.broad.mit.e...
Broad V$PEA3_Q6 View Gene Set 0.0002857 178 0.003138 55 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif ACWTCCK which matches annotation for ETV4: ets variant gene 4 (E1A enhancer binding protein E1AF) www.broad.mit.e...
Broad V$OSF2_Q6 View Gene Set 0.0002842 193 0.003138 55 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif ACCACANM which matches annotation for RUNX2: runt-related transcription factor 2 www.broad.mit.e...
Broad V$GATA6_01 View Gene Set 0.0003211 191 0.003464 57 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNNGATWANN which matches annotation for GATA6: GATA binding protein 6 www.broad.mit.e...
Broad V$GATA1_02 View Gene Set 0.0003855 183 0.003951 58 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNNNNGATANKGNN which matches annotation for GATA1: GATA binding protein 1 (globin transcription factor 1) www.broad.mit.e...
Broad V$NF1_Q6 View Gene Set 0.0003778 206 0.003951 58 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNTTGGCNNNNNNCCNNN which matches annotation for NF1: neurofibromin 1 (neurofibromatosis von Recklinghausen disease Watson disease) www.broad.mit.e...
Broad TGANNYRGCA_V$TCF11MAFG_01 View Gene Set 0.0003833 218 0.003951 58 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TGANNYRGCA which matches annotation for NFE2L1: nuclear factor (erythroid-derived 2)-like 1<br> MAFG: v-maf musculoaponeurotic fibrosarcoma oncogene homolog G (avian) www.broad.mit.e...
Broad RNGTGGGC_UNKNOWN View Gene Set 0.000422 557 0.004254 61 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif RNGTGGGC. Motif does not match any known transcription factor www.broad.mit.e...
Broad TATAAA_V$TATA_01 View Gene Set 0.0004289 1012 0.004255 62 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TATAAA which matches annotation for TAF<br> TATA www.broad.mit.e...
Broad V$RREB1_01 View Gene Set 0.0004701 163 0.004589 63 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif CCCCAAACMMCCCC which matches annotation for RREB1: ras responsive element binding protein 1 www.broad.mit.e...
Broad V$SREBP_Q3 View Gene Set 0.000518 185 0.004978 64 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif VNNVTCACCCYA. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$MYB_Q3 View Gene Set 0.0005439 173 0.005068 65 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNNGNCAGTTN which matches annotation for MYB: v-myb myeloblastosis viral oncogene homolog (avian) www.broad.mit.e...
Broad WGGAATGY_V$TEF1_Q6 View Gene Set 0.0005415 281 0.005068 65 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif WGGAATGY which matches annotation for TEAD1: TEA domain family member 1 (SV40 transcriptional enhancer factor) www.broad.mit.e...
Broad V$P53_02 View Gene Set 0.0005737 189 0.005266 67 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NGRCWTGYCY which matches annotation for TP53: tumor protein p53 (Li-Fraumeni syndrome) www.broad.mit.e...
Broad V$OCT_C View Gene Set 0.0006879 206 0.006221 68 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif CTNATTTGCATAY. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$GATA1_03 View Gene Set 0.0008187 190 0.007297 69 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif ANGNDGATAANNGN which matches annotation for GATA1: GATA binding protein 1 (globin transcription factor 1) www.broad.mit.e...
Broad V$MEF2_Q6_01 View Gene Set 0.0008422 191 0.007301 70 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif RGCTATWTTTAR. Motif does not match any known transcription factor www.broad.mit.e...
Broad CTTTGA_V$LEF1_Q2 View Gene Set 0.0008429 902 0.007301 70 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif CTTTGA which matches annotation for LEF1: lymphoid enhancer-binding factor 1 www.broad.mit.e...
Broad V$AP4_Q6_01 View Gene Set 0.0008633 191 0.007374 72 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif RNCAGCTGC which matches annotation for TFAP4: transcription factor AP-4 (activating enhancer binding protein 4) www.broad.mit.e...
Broad V$AREB6_04 View Gene Set 0.0008968 193 0.007555 73 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif CBGTTTSNN which matches annotation for TCF8: transcription factor 8 (represses interleukin 2 expression) www.broad.mit.e...
Broad CCCNNGGGAR_V$OLF1_01 View Gene Set 0.0009291 238 0.007722 74 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif CCCNNGGGAR which matches annotation for EBF2: early B-cell factor 2 www.broad.mit.e...
Broad V$NFKAPPAB_01 View Gene Set 0.0009563 191 0.007841 75 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GGGAMTTYCC which matches annotation for NFKB<br> RELA: v-rel reticuloendotheliosis viral oncogene homolog A nuclear factor of kappa light polypeptide gene enhancer in B-cells 3 p65 (avian) www.broad.mit.e...
Broad V$RORA1_01 View Gene Set 0.001005 189 0.007946 76 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NWAWNNAGGTCAN which matches annotation for RORA: RAR-related orphan receptor A www.broad.mit.e...
Broad V$EGR2_01 View Gene Set 0.0009977 145 0.007946 76 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NTGCGTRGGCGK which matches annotation for EGR2: early growth response 2 (Krox-20 homolog Drosophila) www.broad.mit.e...
Broad V$AP1_01 View Gene Set 0.001008 204 0.007946 76 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNNTGAGTCAKCN which matches annotation for JUN: jun oncogene www.broad.mit.e...
Broad V$LHX3_01 View Gene Set 0.001036 182 0.008068 79 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif AATTAATTAA which matches annotation for LHX3: LIM homeobox 3 www.broad.mit.e...
Broad V$EGR1_01 View Gene Set 0.001108 193 0.008516 80 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif WTGCGTGGGCGK which matches annotation for EGR1: early growth response 1 www.broad.mit.e...
Broad V$COREBINDINGFACTOR_Q6 View Gene Set 0.0012 200 0.00911 81 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TGTGGTTW which matches annotation for CBFA2T2: core-binding factor runt domain alpha subunit 2; translocated to 2<br> CBFA2T3: core-binding factor runt domain alpha subunit 2; translocated to 3 www.broad.mit.e...
Broad V$HNF3B_01 View Gene Set 0.001256 173 0.009416 82 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif KGNANTRTTTRYTTW which matches annotation for FOXA2: forkhead box A2 www.broad.mit.e...
Broad V$NFKB_Q6 View Gene Set 0.001288 197 0.009499 83 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif NGGGGAMTTTCCNN. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$HEB_Q6 View Gene Set 0.001297 200 0.009499 83 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif RCCWGCTG which matches annotation for TCF12: transcription factor 12 (HTF4 helix-loop-helix transcription factors 4) www.broad.mit.e...
Broad V$ZIC3_01 View Gene Set 0.001321 205 0.009561 85 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NGGGKGGTC which matches annotation for ZIC3: Zic family member 3 heterotaxy 1 (odd-paired homolog Drosophila) www.broad.mit.e...
Broad V$STAT5A_01 View Gene Set 0.001341 190 0.009587 86 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NAWTTCYNGGAANYN which matches annotation for STAT5A: signal transducer and activator of transcription 5A www.broad.mit.e...
Broad V$SP1_Q2_01 View Gene Set 0.001572 185 0.01111 87 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif CCCCGCCCCN which matches annotation for SP1: Sp1 transcription factor www.broad.mit.e...
Broad V$NFE2_01 View Gene Set 0.001634 208 0.01129 88 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TGCTGAGTCAY which matches annotation for NFE2: nuclear factor (erythroid-derived 2) 45kDa www.broad.mit.e...
Broad V$NKX62_Q2 View Gene Set 0.001633 187 0.01129 88 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NWADTAAWTANN which matches annotation for NKX6-2: NK6 transcription factor related locus 2 (Drosophila) www.broad.mit.e...
Broad RACCACAR_V$AML_Q6 View Gene Set 0.001666 189 0.01138 90 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif RACCACAR which matches annotation for RUNX1: runt-related transcription factor 1 (acute myeloid leukemia 1; aml1 oncogene) www.broad.mit.e...
Broad V$IK2_01 View Gene Set 0.001765 208 0.01184 91 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif NNNTGGGAWNNC. Motif does not match any known transcription factor www.broad.mit.e...
Broad YCATTAA_UNKNOWN View Gene Set 0.001771 426 0.01184 91 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif YCATTAA. Motif does not match any known transcription factor www.broad.mit.e...
Broad CTAWWWATA_V$RSRFC4_Q2 View Gene Set 0.001794 283 0.01186 93 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif CTAWWWATA which matches annotation for MEF2A: MADS box transcription enhancer factor 2 polypeptide A (myocyte enhancer factor 2A) www.broad.mit.e...
Broad V$TAL1ALPHAE47_01 View Gene Set 0.001833 192 0.01189 94 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNNAACAGATGKTNNN which matches annotation for TAL1: T-cell acute lymphocytic leukemia 1<br> TCF3: transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47) www.broad.mit.e...
Broad CCANNAGRKGGC_UNKNOWN View Gene Set 0.001837 84 0.01189 94 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif CCANNAGRKGGC. Motif does not match any known transcription factor www.broad.mit.e...
Broad GGGYGTGNY_UNKNOWN View Gene Set 0.00189 487 0.0121 96 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif GGGYGTGNY. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$TATA_01 View Gene Set 0.001935 218 0.01227 97 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif STATAAAWRNNNNNN which matches annotation for TAF<br> TATA www.broad.mit.e...
Broad V$NCX_01 View Gene Set 0.001959 130 0.01229 98 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNGTAAKTNG which matches annotation for TLX2: T-cell leukemia homeobox 2 www.broad.mit.e...
Broad V$TAL1BETAE47_01 View Gene Set 0.001983 184 0.01232 99 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNNAACAGATGKTNNN which matches annotation for TAL1: T-cell acute lymphocytic leukemia 1<br> TCF3: transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47) www.broad.mit.e...
Broad AAANWWTGC_UNKNOWN View Gene Set 0.002106 162 0.01282 100 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif AAANWWTGC. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$AP1_Q6 View Gene Set 0.002093 199 0.01282 100 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNTGACTCANN which matches annotation for JUN: jun oncogene www.broad.mit.e...
Broad V$MEF2_02 View Gene Set 0.002165 182 0.01295 102 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif NNNNNNKCTAWAAATAGMNNNN. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$IRF_Q6 View Gene Set 0.00217 174 0.01295 102 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif BNCRSTTTCANTTYY which matches annotation for IRF1: interferon regulatory factor 1 www.broad.mit.e...
Broad V$LMO2COM_01 View Gene Set 0.002231 190 0.01305 104 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif CNNCAGGTGBNN which matches annotation for LMO2: LIM domain only 2 (rhombotin-like 1) www.broad.mit.e...
Broad V$NF1_Q6_01 View Gene Set 0.002223 202 0.01305 104 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NTGGNNNNNNGCCAANN which matches annotation for NF1: neurofibromin 1 (neurofibromatosis von Recklinghausen disease Watson disease) www.broad.mit.e...
Broad V$NRF2_Q4 View Gene Set 0.00225 190 0.01305 104 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NTGCTGAGTCAKN which matches annotation for NFE2L2: nuclear factor (erythroid-derived 2)-like 2 www.broad.mit.e...
Broad V$OCT1_Q6 View Gene Set 0.002323 202 0.01323 107 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNNNATGCAAATNAN which matches annotation for POU2F1: POU domain class 2 transcription factor 1 www.broad.mit.e...
Broad GGATTA_V$PITX2_Q2 View Gene Set 0.002305 456 0.01323 107 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GGATTA which matches annotation for PITX2: paired-like homeodomain transcription factor 2 www.broad.mit.e...
Broad V$STAT5B_01 View Gene Set 0.002427 188 0.01369 109 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NAWTTCYNGGAAWTN which matches annotation for STAT5B: signal transducer and activator of transcription 5B www.broad.mit.e...
Broad V$MYOGENIN_Q6 View Gene Set 0.002461 187 0.01376 110 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif RGCAGSTG which matches annotation for MYOG: myogenin (myogenic factor 4) www.broad.mit.e...
Broad V$MEF2_03 View Gene Set 0.002579 184 0.01416 111 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif NNNNNWKCTAWAAATAGMNNNN. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$LFA1_Q6 View Gene Set 0.002576 186 0.01416 111 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GGGSTCWR which matches annotation for ITGAL: integrin alpha L (antigen CD11A (p180) lymphocyte function-associated antigen 1; alpha polypeptide) www.broad.mit.e...
Broad V$AREB6_02 View Gene Set 0.002627 189 0.01425 113 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif WNWCACCTGWNN which matches annotation for TCF8: transcription factor 8 (represses interleukin 2 expression) www.broad.mit.e...
Broad V$TFIII_Q6 View Gene Set 0.002654 161 0.01425 113 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif RGAGGKAGG which matches annotation for GTF2A1: general transcription factor IIA 1 19/37kDa<br> GTF2A2: general transcription factor IIA 2 12kDa www.broad.mit.e...
Broad TGASTMAGC_V$NFE2_01 View Gene Set 0.002665 151 0.01425 113 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TGASTMAGC which matches annotation for NFE2: nuclear factor (erythroid-derived 2) 45kDa www.broad.mit.e...
Broad V$PPARA_02 View Gene Set 0.002722 96 0.01443 116 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNRGGTCATWGGGGTSANG which matches annotation for PPARA: peroxisome proliferative activated receptor alpha www.broad.mit.e...
Broad CAGNWMCNNNGAC_UNKNOWN View Gene Set 0.002898 68 0.01523 117 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif CAGNWMCNNNGAC. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$TEF1_Q6 View Gene Set 0.002966 167 0.01546 118 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif GRRATG. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$HFH3_01 View Gene Set 0.003073 156 0.01588 119 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif KNNTRTTTRTTTA which matches annotation for FOXI1: forkhead box I1 www.broad.mit.e...
Broad V$PXR_Q2 View Gene Set 0.003161 195 0.0162 120 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif RRGGTYANTRNM which matches annotation for NR1H4: nuclear receptor subfamily 1 group H member 4 www.broad.mit.e...
Broad V$RFX1_02 View Gene Set 0.00322 190 0.01637 121 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNGTNRCNATRGYAACNN which matches annotation for RFX1: regulatory factor X 1 (influences HLA class II expression) www.broad.mit.e...
Broad V$LYF1_01 View Gene Set 0.003299 204 0.01663 122 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif TTTGGGAGR. Motif does not match any known transcription factor www.broad.mit.e...
Broad ARGGGTTAA_UNKNOWN View Gene Set 0.003723 97 0.01861 123 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif ARGGGTTAA. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$MZF1_02 View Gene Set 0.004003 175 0.01985 124 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif KNNNKAGGGGNAA. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$STAT4_01 View Gene Set 0.004107 193 0.01999 125 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif SNWTTCNN which matches annotation for STAT4: signal transducer and activator of transcription 4 www.broad.mit.e...
Broad V$MAF_Q6 View Gene Set 0.004127 202 0.01999 125 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TRGRRGGAAGTKKSST which matches annotation for MAF: v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian) www.broad.mit.e...
Broad TGACCTY_V$ERR1_Q2 View Gene Set 0.004122 772 0.01999 125 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TGACCTY which matches annotation for ESRRA: estrogen-related receptor alpha www.broad.mit.e...
Broad V$AP2REP_01 View Gene Set 0.004176 133 0.02006 128 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif CAGTGGG which matches annotation for KLF12: Kruppel-like factor 12 www.broad.mit.e...
Broad V$MEIS1_01 View Gene Set 0.004306 173 0.02053 129 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNNTGACAGNNN which matches annotation for MEIS1: Meis1 myeloid ecotropic viral integration site 1 homolog (mouse) www.broad.mit.e...
Broad CCTNTMAGA_UNKNOWN View Gene Set 0.004555 94 0.02155 130 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif CCTNTMAGA. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$NKX61_01 View Gene Set 0.004669 177 0.02192 131 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TWTTTAATTGGTT which matches annotation for NKX6-1: NK6 transcription factor related locus 1 (Drosophila) www.broad.mit.e...
Broad V$SMAD4_Q6 View Gene Set 0.004775 173 0.02225 132 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GKSRKKCAGMCANCY which matches annotation for SMAD4: SMAD mothers against DPP homolog 4 (Drosophila) www.broad.mit.e...
Broad V$AP1_C View Gene Set 0.005493 222 0.0254 133 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NTGASTCAG which matches annotation for JUN: jun oncogene www.broad.mit.e...
Broad V$OCT1_Q5_01 View Gene Set 0.005569 209 0.02556 134 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TNATTTGCATW which matches annotation for POU2F1: POU domain class 2 transcription factor 1 www.broad.mit.e...
Broad V$CP2_02 View Gene Set 0.006042 178 0.02753 135 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GCTGGNTNGNNCYNG which matches annotation for TFCP2: transcription factor CP2 www.broad.mit.e...
Broad V$HEN1_02 View Gene Set 0.006345 141 0.02853 136 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNGGGNCGCAGCTGCGNCCCNN which matches annotation for NHLH1: nescient helix loop helix 1 www.broad.mit.e...
Broad V$CRX_Q4 View Gene Set 0.006355 207 0.02853 136 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif YNNNTAATCYCMN which matches annotation for CRX: cone-rod homeobox www.broad.mit.e...
Broad RNTCANNRNNYNATTW_UNKNOWN View Gene Set 0.006484 47 0.0289 138 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif RNTCANNRNNYNATTW. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$STAT_01 View Gene Set 0.006598 197 0.02919 139 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif TTCCCGKAA. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$OCT1_B View Gene Set 0.007167 213 0.0314 140 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TATGCAAATN which matches annotation for POU2F1: POU domain class 2 transcription factor 1 www.broad.mit.e...
Broad RYTGCNWTGGNR_UNKNOWN View Gene Set 0.007199 85 0.0314 140 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif RYTGCNWTGGNR. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$NERF_Q2 View Gene Set 0.007299 183 0.03161 142 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif YRNCAGGAAGYRNSTBDS which matches annotation for ELF2: E74-like factor 2 (ets domain transcription factor) www.broad.mit.e...
Broad V$AP2_Q6_01 View Gene Set 0.007677 181 0.03284 143 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif SNNNCCNCAGGCN which matches annotation for GTF3A: general transcription factor IIIA www.broad.mit.e...
Broad RGAGGAARY_V$PU1_Q6 View Gene Set 0.00769 370 0.03284 143 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif RGAGGAARY which matches annotation for SPI1: spleen focus forming virus (SFFV) proviral integration oncogene spi1 www.broad.mit.e...
Broad V$ERR1_Q2 View Gene Set 0.008405 193 0.03565 145 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNNTNAAGGTCANN which matches annotation for ESRRA: estrogen-related receptor alpha www.broad.mit.e...
Broad V$CREBP1_Q2 View Gene Set 0.008548 185 0.03576 146 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif VGTGACGTMACN which matches annotation for ATF2: activating transcription factor 2 www.broad.mit.e...
Broad V$TFIIA_Q6 View Gene Set 0.008509 207 0.03576 146 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TMTRWRAGGRSS which matches annotation for GTF2A1: general transcription factor IIA 1 19/37kDa<br> GTF2A2: general transcription factor IIA 2 12kDa www.broad.mit.e...
Broad CTTTGT_V$LEF1_Q2 View Gene Set 0.00935 1458 0.03885 148 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif CTTTGT which matches annotation for LEF1: lymphoid enhancer-binding factor 1 www.broad.mit.e...
Broad V$SP3_Q3 View Gene Set 0.009574 184 0.03952 149 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif ASMCTTGGGSRGGG which matches annotation for SP3: Sp3 transcription factor www.broad.mit.e...
Broad GCCNNNWTAAR_UNKNOWN View Gene Set 0.00969 113 0.03973 150 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif GCCNNNWTAAR. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$RSRFC4_01 View Gene Set 0.01024 192 0.04171 151 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif RNKCTATTTWTAGMWN which matches annotation for MEF2A: MADS box transcription enhancer factor 2 polypeptide A (myocyte enhancer factor 2A) www.broad.mit.e...
Broad V$IRF7_01 View Gene Set 0.0104 201 0.04207 152 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TNSGAAWNCGAAANTNNN which matches annotation for IRF7: interferon regulatory factor 7 www.broad.mit.e...
Broad V$DR3_Q4 View Gene Set 0.01056 98 0.04243 153 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif RRTGNMCYTNNTGAMCCNYNT which matches annotation for VDR: vitamin D (1 25- dihydroxyvitamin D3) receptor www.broad.mit.e...
Broad V$ISRE_01 View Gene Set 0.01064 171 0.0425 154 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif CAGTTTCWCTTTYCC which matches annotation for STAT1: signal transducer and activator of transcription 1 91kDa<br> STAT2: signal transducer and activator of transcription 2 113kDa www.broad.mit.e...
Broad V$ARP1_01 View Gene Set 0.01081 122 0.04261 155 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TGARCCYTTGAMCCCW which matches annotation for PITX2: paired-like homeodomain transcription factor 2 www.broad.mit.e...
Broad V$PAX4_01 View Gene Set 0.0108 201 0.04261 155 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NGNVGTCANGCGTGNNSNNYN which matches annotation for PAX4: paired box gene 4 www.broad.mit.e...
Broad V$SOX9_B1 View Gene Set 0.01096 183 0.04266 157 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNNNAACAATRGNN which matches annotation for SOX9: SRY (sex determining region Y)-box 9 (campomelic dysplasia autosomal sex-reversal) www.broad.mit.e...
Broad WWTAAGGC_UNKNOWN View Gene Set 0.01091 118 0.04266 157 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif WWTAAGGC. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$AP2GAMMA_01 View Gene Set 0.01128 177 0.04336 159 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GCCYNNGGS which matches annotation for TFAP2C: transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma) www.broad.mit.e...
Broad YGTCCTTGR_UNKNOWN View Gene Set 0.01123 76 0.04336 159 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif YGTCCTTGR. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$PITX2_Q2 View Gene Set 0.01162 206 0.0444 161 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif WNTAATCCCAR which matches annotation for PITX2: paired-like homeodomain transcription factor 2 www.broad.mit.e...
Broad YATTNATC_UNKNOWN View Gene Set 0.0117 275 0.04442 162 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif YATTNATC. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$BRN2_01 View Gene Set 0.01178 188 0.04444 163 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNCATNSRWAATNMRN which matches annotation for POU3F2: POU domain class 3 transcription factor 2 www.broad.mit.e...
Broad TGTYNNNNNRGCARM_UNKNOWN View Gene Set 0.01255 51 0.04706 164 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif TGTYNNNNNRGCARM. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$AP1_Q2 View Gene Set 0.01269 216 0.04731 165 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif RSTGACTNANW which matches annotation for JUN: jun oncogene www.broad.mit.e...
Broad V$HNF1_C View Gene Set 0.01335 174 0.04944 166 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif DGTTAATKAWTNACCAM which matches annotation for TCF1: transcription factor 1 hepatic; LF-B1 hepatic nuclear factor (HNF1) albumin proximal factor www.broad.mit.e...

Gene Set Collection: Broad.c4.CGN

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad MORF_RAGE View Gene Set 6.141e-10 132 2.622e-07 1 Neighborhood of RAGE www.broad.mit.e...
Broad MORF_BCL2 View Gene Set 5.377e-09 202 6.728e-07 2 Neighborhood of BCL2 www.broad.mit.e...
Broad MORF_CNTN1 View Gene Set 5.433e-09 95 6.728e-07 2 Neighborhood of CNTN1 www.broad.mit.e...
Broad MORF_PML View Gene Set 6.303e-09 129 6.728e-07 2 Neighborhood of PML www.broad.mit.e...
Broad MORF_TNFRSF25 View Gene Set 2.509e-08 242 2.142e-06 5 Neighborhood of TNFRSF25 www.broad.mit.e...
Broad MORF_LTK View Gene Set 4.565e-08 133 2.785e-06 6 Neighborhood of LTK www.broad.mit.e...
Broad GCM_HMGA2 View Gene Set 4.361e-08 123 2.785e-06 6 Neighborhood of HMGA2 www.broad.mit.e...
Broad MORF_PDPK1 View Gene Set 5.643e-08 67 3.012e-06 8 Neighborhood of PDPK1 www.broad.mit.e...
Broad MORF_CASP2 View Gene Set 8.921e-08 89 4.233e-06 9 Neighborhood of CASP2 www.broad.mit.e...
Broad MORF_JAK3 View Gene Set 2.19e-07 86 9.349e-06 10 Neighborhood of JAK3 www.broad.mit.e...
Broad MORF_FDXR View Gene Set 5.791e-07 205 2.248e-05 11 Neighborhood of FDXR www.broad.mit.e...
Broad GNF2_LCAT View Gene Set 7.121e-07 123 2.534e-05 12 Neighborhood of LCAT www.broad.mit.e...
Broad GNF2_HPN View Gene Set 1.449e-06 132 4.761e-05 13 Neighborhood of HPN www.broad.mit.e...
Broad MORF_ARAF1 View Gene Set 2.272e-06 70 6.31e-05 14 Neighborhood of ARAF1 www.broad.mit.e...
Broad MORF_LMO1 View Gene Set 2.66e-06 46 6.31e-05 14 Neighborhood of LMO1 www.broad.mit.e...
Broad MORF_RBM8A View Gene Set 2.385e-06 75 6.31e-05 14 Neighborhood of RBM8A www.broad.mit.e...
Broad CAR_MYST2 View Gene Set 2.404e-06 27 6.31e-05 14 Neighborhood of MYST2 www.broad.mit.e...
Broad GNF2_HPX View Gene Set 2.58e-06 134 6.31e-05 14 Neighborhood of HPX www.broad.mit.e...
Broad MORF_DDX11 View Gene Set 5.196e-06 138 0.0001168 19 Neighborhood of DDX11 www.broad.mit.e...
Broad MORF_MYST2 View Gene Set 6.588e-06 60 0.000134 20 Neighborhood of MYST2 www.broad.mit.e...
Broad GNF2_GSTM1 View Gene Set 6.411e-06 108 0.000134 20 Neighborhood of GSTM1 www.broad.mit.e...
Broad GNF2_TST View Gene Set 8.042e-06 103 0.0001561 22 Neighborhood of TST www.broad.mit.e...
Broad GCM_SMARCD1 View Gene Set 2.054e-05 101 0.0003814 23 Neighborhood of SMARCD1 www.broad.mit.e...
Broad MORF_ETV3 View Gene Set 2.217e-05 63 0.0003945 24 Neighborhood of ETV3 www.broad.mit.e...
Broad GCM_LTK View Gene Set 2.53e-05 43 0.0004154 25 Neighborhood of LTK www.broad.mit.e...
Broad GNF2_TNFRSF1B View Gene Set 2.52e-05 60 0.0004154 25 Neighborhood of TNFRSF1B www.broad.mit.e...
Broad GNF2_CEBPA View Gene Set 4.313e-05 64 0.0006758 27 Neighborhood of CEBPA www.broad.mit.e...
Broad GNF2_DNM1 View Gene Set 4.431e-05 69 0.0006758 27 Neighborhood of DNM1 www.broad.mit.e...
Broad MORF_STK17A View Gene Set 5.833e-05 155 0.0008302 29 Neighborhood of STK17A www.broad.mit.e...
Broad MORF_ORC1L View Gene Set 5.677e-05 61 0.0008302 29 Neighborhood of ORC1L www.broad.mit.e...
Broad CAR_MLANA View Gene Set 6.53e-05 42 0.0008994 31 Neighborhood of MLANA www.broad.mit.e...
Broad MORF_PAX7 View Gene Set 6.921e-05 251 0.0009235 32 Neighborhood of PAX7 www.broad.mit.e...
Broad GCM_PRKCG View Gene Set 7.286e-05 60 0.0009428 33 Neighborhood of PRKCG www.broad.mit.e...
Broad MORF_MT4 View Gene Set 7.565e-05 218 0.0009501 34 Neighborhood of MT4 www.broad.mit.e...
Broad GCM_PTPRU View Gene Set 8.007e-05 55 0.0009768 35 Neighborhood of PTPRU www.broad.mit.e...
Broad MORF_PTPN9 View Gene Set 8.478e-05 54 0.001006 36 Neighborhood of PTPN9 www.broad.mit.e...
Broad GCM_CDH5 View Gene Set 8.972e-05 35 0.001035 37 Neighborhood of CDH5 www.broad.mit.e...
Broad MORF_IKBKG View Gene Set 0.0001558 119 0.001751 38 Neighborhood of IKBKG www.broad.mit.e...
Broad MORF_NF1 View Gene Set 0.000181 158 0.001981 39 Neighborhood of NF1 www.broad.mit.e...
Broad MORF_FLT1 View Gene Set 0.0001938 117 0.002018 40 Neighborhood of FLT1 www.broad.mit.e...
Broad GNF2_IL2RB View Gene Set 0.0001924 44 0.002018 40 Neighborhood of IL2RB www.broad.mit.e...
Broad GNF2_HLA-C View Gene Set 0.000245 44 0.002491 42 Neighborhood of HLA-C www.broad.mit.e...
Broad GCM_TEC View Gene Set 0.0003272 33 0.003175 43 Neighborhood of TEC www.broad.mit.e...
Broad GNF2_CD7 View Gene Set 0.0003212 38 0.003175 43 Neighborhood of CD7 www.broad.mit.e...
Broad GNF2_PTPN6 View Gene Set 0.0003536 44 0.003355 45 Neighborhood of PTPN6 www.broad.mit.e...
Broad CAR_WBSCR22 View Gene Set 0.0003814 35 0.003541 46 Neighborhood of WBSCR22 www.broad.mit.e...
Broad GCM_FANCC View Gene Set 0.0004428 120 0.004023 47 Neighborhood of FANCC www.broad.mit.e...
Broad GNF2_HCK View Gene Set 0.0005322 88 0.004735 48 Neighborhood of HCK www.broad.mit.e...
Broad MORF_ARL3 View Gene Set 0.0005724 291 0.004889 49 Neighborhood of ARL3 www.broad.mit.e...
Broad MORF_IL13 View Gene Set 0.0005693 216 0.004889 49 Neighborhood of IL13 www.broad.mit.e...
Broad GNF2_IGFBP1 View Gene Set 0.0007335 35 0.006141 51 Neighborhood of IGFBP1 www.broad.mit.e...
Broad MORF_NOS2A View Gene Set 0.0009539 276 0.007833 52 Neighborhood of NOS2A www.broad.mit.e...
Broad GNF2_S100A4 View Gene Set 0.001022 43 0.008235 53 Neighborhood of S100A4 www.broad.mit.e...
Broad GCM_ERCC4 View Gene Set 0.001372 29 0.01085 54 Neighborhood of ERCC4 www.broad.mit.e...
Broad GNF2_RAB3A View Gene Set 0.001464 34 0.01137 55 Neighborhood of RAB3A www.broad.mit.e...
Broad GCM_DDX11 View Gene Set 0.00156 38 0.01158 56 Neighborhood of DDX11 www.broad.mit.e...
Broad GCM_FCGR2B View Gene Set 0.001535 37 0.01158 56 Neighborhood of FCGR2B www.broad.mit.e...
Broad GNF2_CD53 View Gene Set 0.001573 54 0.01158 56 Neighborhood of CD53 www.broad.mit.e...
Broad GNF2_FGR View Gene Set 0.00193 31 0.01397 59 Neighborhood of FGR www.broad.mit.e...
Broad GCM_BNIP1 View Gene Set 0.002118 71 0.01483 60 Neighborhood of BNIP1 www.broad.mit.e...
Broad GNF2_PTPN4 View Gene Set 0.002085 47 0.01483 60 Neighborhood of PTPN4 www.broad.mit.e...
Broad GCM_PRKAG1 View Gene Set 0.002464 49 0.01697 62 Neighborhood of PRKAG1 www.broad.mit.e...
Broad GNF2_CASP1 View Gene Set 0.003138 97 0.02127 63 Neighborhood of CASP1 www.broad.mit.e...
Broad GNF2_IGF1 View Gene Set 0.00393 26 0.02622 64 Neighborhood of IGF1 www.broad.mit.e...
Broad MORF_IL4 View Gene Set 0.004488 186 0.02889 65 Neighborhood of IL4 www.broad.mit.e...
Broad MORF_RBBP8 View Gene Set 0.004518 190 0.02889 65 Neighborhood of RBBP8 www.broad.mit.e...
Broad GNF2_MYL3 View Gene Set 0.004534 31 0.02889 65 Neighborhood of MYL3 www.broad.mit.e...
Broad GNF2_EGFR View Gene Set 0.004915 32 0.03042 68 Neighborhood of EGFR www.broad.mit.e...
Broad GNF2_MYL2 View Gene Set 0.004861 32 0.03042 68 Neighborhood of MYL2 www.broad.mit.e...
Broad GNF2_CYP2B6 View Gene Set 0.00513 49 0.03087 70 Neighborhood of CYP2B6 www.broad.mit.e...
Broad GNF2_VAV1 View Gene Set 0.005133 34 0.03087 70 Neighborhood of VAV1 www.broad.mit.e...
Broad MORF_ESR1 View Gene Set 0.005327 159 0.03159 72 Neighborhood of ESR1 www.broad.mit.e...
Broad GNF2_RAB7L1 View Gene Set 0.005726 30 0.03349 73 Neighborhood of RAB7L1 www.broad.mit.e...
Broad GNF2_ICAM3 View Gene Set 0.005934 36 0.03424 74 Neighborhood of ICAM3 www.broad.mit.e...
Broad CAR_TNFRSF25 View Gene Set 0.006406 30 0.03647 75 Neighborhood of TNFRSF25 www.broad.mit.e...
Broad MORF_MYC View Gene Set 0.006818 71 0.03831 76 Neighborhood of MYC www.broad.mit.e...
Broad MORF_FOSL1 View Gene Set 0.007057 386 0.03913 77 Neighborhood of FOSL1 www.broad.mit.e...
Broad GNF2_CD48 View Gene Set 0.008281 31 0.04533 78 Neighborhood of CD48 www.broad.mit.e...
Broad GNF2_CD1D View Gene Set 0.009099 41 0.04918 79 Neighborhood of CD1D www.broad.mit.e...
Broad GNF2_CARD15 View Gene Set 0.009424 62 0.04976 80 Neighborhood of CARD15 www.broad.mit.e...
Broad GNF2_CD33 View Gene Set 0.009557 46 0.04976 80 Neighborhood of CD33 www.broad.mit.e...
Broad GNF2_ITGB2 View Gene Set 0.009554 54 0.04976 80 Neighborhood of ITGB2 www.broad.mit.e...

Gene Set Collection: Broad.c4.CM

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad module_64 View Gene Set 1.127e-31 506 5.115e-29 1 Genes in module_64 www.broad.mit.e...
Broad module_88 View Gene Set 1.141e-30 812 2.589e-28 2 Genes in module_88 www.broad.mit.e...
Broad module_55 View Gene Set 6.529e-29 807 9.881e-27 3 Genes in module_55 www.broad.mit.e...
Broad module_27 View Gene Set 2.06e-24 345 2.338e-22 4 Genes in module_27 www.broad.mit.e...
Broad module_41 View Gene Set 1.128e-23 542 1.024e-21 5 Genes in module_41 www.broad.mit.e...
Broad module_60 View Gene Set 1.428e-22 403 1.081e-20 6 Genes in module_60 www.broad.mit.e...
Broad module_23 View Gene Set 4.138e-22 552 2.684e-20 7 Genes in module_23 www.broad.mit.e...
Broad module_66 View Gene Set 2.908e-20 530 1.65e-18 8 Genes in module_66 www.broad.mit.e...
Broad module_100 View Gene Set 3.678e-20 523 1.855e-18 9 Genes in module_100 www.broad.mit.e...
Broad module_117 View Gene Set 7.466e-20 699 3.39e-18 10 Genes in module_117 www.broad.mit.e...
Broad module_137 View Gene Set 1.583e-19 525 6.535e-18 11 Genes in module_137 www.broad.mit.e...
Broad module_13 View Gene Set 2.53e-19 498 9.571e-18 12 Genes in module_13 www.broad.mit.e...
Broad module_11 View Gene Set 6.425e-19 520 2.244e-17 13 Genes in module_11 www.broad.mit.e...
Broad module_84 View Gene Set 2.266e-18 526 7.348e-17 14 Genes in module_84 www.broad.mit.e...
Broad module_45 View Gene Set 4.498e-17 563 1.361e-15 15 Genes in module_45 www.broad.mit.e...
Broad module_181 View Gene Set 4.078e-16 292 1.157e-14 16 Genes in module_181 www.broad.mit.e...
Broad module_46 View Gene Set 3.44e-15 386 9.187e-14 17 Genes in module_46 www.broad.mit.e...
Broad module_104 View Gene Set 6.916e-15 337 1.744e-13 18 Genes in module_104 www.broad.mit.e...
Broad module_75 View Gene Set 5.823e-14 391 1.322e-12 19 Genes in module_75 www.broad.mit.e...
Broad module_242 View Gene Set 5.745e-14 204 1.322e-12 19 Genes in module_242 www.broad.mit.e...
Broad module_112 View Gene Set 1.468e-13 255 3.173e-12 21 Genes in module_112 www.broad.mit.e...
Broad module_379 View Gene Set 1.965e-13 194 4.054e-12 22 Genes in module_379 www.broad.mit.e...
Broad module_176 View Gene Set 2.798e-13 225 5.524e-12 23 Genes in module_176 www.broad.mit.e...
Broad module_63 View Gene Set 8.626e-13 210 1.632e-11 24 Genes in module_63 www.broad.mit.e...
Broad module_111 View Gene Set 1.789e-12 151 3.249e-11 25 Genes in module_111 www.broad.mit.e...
Broad module_220 View Gene Set 1.079e-11 328 1.884e-10 26 Genes in module_220 www.broad.mit.e...
Broad module_38 View Gene Set 2.419e-11 453 4.068e-10 27 Genes in module_38 www.broad.mit.e...
Broad module_99 View Gene Set 2.106e-10 346 3.414e-09 28 Genes in module_99 www.broad.mit.e...
Broad module_157 View Gene Set 4.149e-10 105 6.496e-09 29 Genes in module_157 www.broad.mit.e...
Broad module_24 View Gene Set 6.223e-10 443 9.417e-09 30 Genes in module_24 www.broad.mit.e...
Broad module_20 View Gene Set 8.486e-10 81 1.243e-08 31 Genes in module_20 www.broad.mit.e...
Broad module_274 View Gene Set 2.411e-09 82 3.421e-08 32 Genes in module_274 www.broad.mit.e...
Broad module_44 View Gene Set 3.579e-09 319 4.924e-08 33 Genes in module_44 www.broad.mit.e...
Broad module_94 View Gene Set 4.324e-09 362 5.774e-08 34 Genes in module_94 www.broad.mit.e...
Broad module_33 View Gene Set 2.67e-08 369 3.463e-07 35 Genes in module_33 www.broad.mit.e...
Broad module_113 View Gene Set 8.414e-08 105 1.061e-06 36 Genes in module_113 www.broad.mit.e...
Broad module_7 View Gene Set 9.255e-08 227 1.135e-06 37 Genes in module_7 www.broad.mit.e...
Broad module_146 View Gene Set 9.502e-08 92 1.135e-06 37 Genes in module_146 www.broad.mit.e...
Broad module_6 View Gene Set 2.097e-07 403 2.441e-06 39 Genes in module_6 www.broad.mit.e...
Broad module_12 View Gene Set 5.715e-07 346 6.486e-06 40 Genes in module_12 www.broad.mit.e...
Broad module_213 View Gene Set 1.302e-06 77 1.442e-05 41 Genes in module_213 www.broad.mit.e...
Broad module_119 View Gene Set 1.729e-06 135 1.869e-05 42 Genes in module_119 www.broad.mit.e...
Broad module_122 View Gene Set 2.337e-06 138 2.468e-05 43 Genes in module_122 www.broad.mit.e...
Broad module_292 View Gene Set 2.792e-06 129 2.881e-05 44 Genes in module_292 www.broad.mit.e...
Broad module_345 View Gene Set 6.806e-06 118 6.867e-05 45 Genes in module_345 www.broad.mit.e...
Broad module_289 View Gene Set 1.337e-05 118 0.000132 46 Genes in module_289 www.broad.mit.e...
Broad module_436 View Gene Set 1.835e-05 129 0.0001773 47 Genes in module_436 www.broad.mit.e...
Broad module_257 View Gene Set 2.024e-05 137 0.0001914 48 Genes in module_257 www.broad.mit.e...
Broad module_92 View Gene Set 2.514e-05 146 0.0002329 49 Genes in module_92 www.broad.mit.e...
Broad module_486 View Gene Set 2.799e-05 88 0.0002541 50 Genes in module_486 www.broad.mit.e...
Broad module_175 View Gene Set 3.123e-05 53 0.000278 51 Genes in module_175 www.broad.mit.e...
Broad module_316 View Gene Set 4.262e-05 70 0.0003721 52 Genes in module_316 www.broad.mit.e...
Broad module_324 View Gene Set 4.742e-05 131 0.0004062 53 Genes in module_324 www.broad.mit.e...
Broad module_19 View Gene Set 7.781e-05 306 0.0006542 54 Genes in module_19 www.broad.mit.e...
Broad module_171 View Gene Set 8.66e-05 131 0.0007148 55 Genes in module_171 www.broad.mit.e...
Broad module_199 View Gene Set 9.265e-05 57 0.0007511 56 Genes in module_199 www.broad.mit.e...
Broad module_188 View Gene Set 0.0001212 130 0.0009651 57 Genes in module_188 www.broad.mit.e...
Broad module_259 View Gene Set 0.0001295 46 0.001013 58 Genes in module_259 www.broad.mit.e...
Broad module_129 View Gene Set 0.0001555 215 0.001197 59 Genes in module_129 www.broad.mit.e...
Broad module_5 View Gene Set 0.0002393 420 0.001781 60 Genes in module_5 www.broad.mit.e...
Broad module_138 View Gene Set 0.0002366 86 0.001781 60 Genes in module_138 www.broad.mit.e...
Broad module_208 View Gene Set 0.0002496 118 0.001828 62 Genes in module_208 www.broad.mit.e...
Broad module_200 View Gene Set 0.0002757 27 0.001987 63 Genes in module_200 www.broad.mit.e...
Broad module_51 View Gene Set 0.0003343 36 0.002371 64 Genes in module_51 www.broad.mit.e...
Broad module_134 View Gene Set 0.0003961 28 0.002767 65 Genes in module_134 www.broad.mit.e...
Broad module_381 View Gene Set 0.0006346 12 0.004365 66 Genes in module_381 www.broad.mit.e...
Broad module_165 View Gene Set 0.000669 78 0.004533 67 Genes in module_165 www.broad.mit.e...
Broad module_145 View Gene Set 0.0006844 106 0.004569 68 Genes in module_145 www.broad.mit.e...
Broad module_85 View Gene Set 0.0007901 51 0.005199 69 Genes in module_85 www.broad.mit.e...
Broad module_109 View Gene Set 0.001107 34 0.007181 70 Genes in module_109 www.broad.mit.e...
Broad module_143 View Gene Set 0.001199 14 0.00748 71 Genes in module_143 www.broad.mit.e...
Broad module_170 View Gene Set 0.001203 100 0.00748 71 Genes in module_170 www.broad.mit.e...
Broad module_410 View Gene Set 0.00117 35 0.00748 71 Genes in module_410 www.broad.mit.e...
Broad module_1 View Gene Set 0.001223 355 0.007505 74 Genes in module_1 www.broad.mit.e...
Broad module_248 View Gene Set 0.001281 126 0.007755 75 Genes in module_248 www.broad.mit.e...
Broad module_375 View Gene Set 0.001305 84 0.007796 76 Genes in module_375 www.broad.mit.e...
Broad module_163 View Gene Set 0.001438 495 0.008479 77 Genes in module_163 www.broad.mit.e...
Broad module_238 View Gene Set 0.001527 150 0.008885 78 Genes in module_238 www.broad.mit.e...
Broad module_2 View Gene Set 0.001713 373 0.009842 79 Genes in module_2 www.broad.mit.e...
Broad module_128 View Gene Set 0.001757 98 0.009968 80 Genes in module_128 www.broad.mit.e...
Broad module_48 View Gene Set 0.001976 291 0.01099 81 Genes in module_48 www.broad.mit.e...
Broad module_120 View Gene Set 0.001984 72 0.01099 81 Genes in module_120 www.broad.mit.e...
Broad module_96 View Gene Set 0.002046 36 0.01119 83 Genes in module_96 www.broad.mit.e...
Broad module_95 View Gene Set 0.002162 490 0.01169 84 Genes in module_95 www.broad.mit.e...
Broad module_79 View Gene Set 0.002269 100 0.01212 85 Genes in module_79 www.broad.mit.e...
Broad module_301 View Gene Set 0.002326 144 0.01228 86 Genes in module_301 www.broad.mit.e...
Broad module_288 View Gene Set 0.002507 34 0.01308 87 Genes in module_288 www.broad.mit.e...
Broad module_223 View Gene Set 0.002653 140 0.01369 88 Genes in module_223 www.broad.mit.e...
Broad module_80 View Gene Set 0.002813 32 0.01435 89 Genes in module_80 www.broad.mit.e...
Broad module_361 View Gene Set 0.00305 136 0.01539 90 Genes in module_361 www.broad.mit.e...
Broad module_144 View Gene Set 0.003191 8 0.01592 91 Genes in module_144 www.broad.mit.e...
Broad module_489 View Gene Set 0.003606 30 0.01775 92 Genes in module_489 www.broad.mit.e...
Broad module_513 View Gene Set 0.003636 8 0.01775 92 Genes in module_513 www.broad.mit.e...
Broad module_431 View Gene Set 0.004063 15 0.01962 94 Genes in module_431 www.broad.mit.e...
Broad module_267 View Gene Set 0.004283 15 0.02047 95 Genes in module_267 www.broad.mit.e...
Broad module_571 View Gene Set 0.004787 15 0.02264 96 Genes in module_571 www.broad.mit.e...
Broad module_214 View Gene Set 0.007065 27 0.03307 97 Genes in module_214 www.broad.mit.e...
Broad module_202 View Gene Set 0.007521 28 0.03484 98 Genes in module_202 www.broad.mit.e...
Broad module_107 View Gene Set 0.008317 77 0.03814 99 Genes in module_107 www.broad.mit.e...
Broad module_342 View Gene Set 0.008589 195 0.03899 100 Genes in module_342 www.broad.mit.e...
Broad module_47 View Gene Set 0.008794 216 0.03953 101 Genes in module_47 www.broad.mit.e...
Broad module_172 View Gene Set 0.009789 93 0.04357 102 Genes in module_172 www.broad.mit.e...
Broad module_216 View Gene Set 0.01019 9 0.0449 103 Genes in module_216 www.broad.mit.e...
Broad module_293 View Gene Set 0.01121 12 0.04895 104 Genes in module_293 www.broad.mit.e...

Gene Set Collection: Broad.c5.BP

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad SYSTEM_PROCESS View Gene Set 1.501e-15 558 1.238e-12 1 Genes annotated by the GO term GO:0003008. A biological process occurring at the level of an organ system pertinent to the function of the organism. An organ system is a regularly interacting or interdependent group of organs or tissues that work together to carry out a given biological process. www.broad.mit.e...
Broad G_PROTEIN_COUPLED_RECEPTOR_PROTEIN_SIGNALING_PATHWAY View Gene Set 6.598e-15 326 2.722e-12 2 Genes annotated by the GO term GO:0007186. The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand. www.broad.mit.e...
Broad CELL_SURFACE_RECEPTOR_LINKED_SIGNAL_TRANSDUCTION_GO_0007166 View Gene Set 1.572e-14 620 4.324e-12 3 Genes annotated by the GO term GO:0007166. Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell. www.broad.mit.e...
Broad SIGNAL_TRANSDUCTION View Gene Set 8.435e-13 1597 1.74e-10 4 Genes annotated by the GO term GO:0007165. The cascade of processes by which a signal interacts with a receptor causing a change in the level or activity of a second messenger or other downstream target and ultimately effecting a change in the functioning of the cell. www.broad.mit.e...
Broad CELL_CELL_SIGNALING View Gene Set 2.597e-12 400 4.286e-10 5 Genes annotated by the GO term GO:0007267. Any process that mediates the transfer of information from one cell to another. www.broad.mit.e...
Broad NEUROLOGICAL_SYSTEM_PROCESS View Gene Set 5.114e-08 377 6.027e-06 6 Genes annotated by the GO term GO:0050877. The processes pertaining to the functions of the nervous system of an organism. www.broad.mit.e...
Broad ANATOMICAL_STRUCTURE_DEVELOPMENT View Gene Set 4.463e-08 1004 6.027e-06 6 Genes annotated by the GO term GO:0048856. The biological process whose specific outcome is the progression of an anatomical structure from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure whatever form that may be including its natural destruction. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel or microscopic such as an acrosome. www.broad.mit.e...
Broad SYNAPTIC_TRANSMISSION View Gene Set 7.83e-08 172 8.075e-06 8 Genes annotated by the GO term GO:0007268. The process of communication from a neuron to a target (neuron muscle or secretory cell) across a synapse. www.broad.mit.e...
Broad DEFENSE_RESPONSE View Gene Set 1.402e-07 264 1.285e-05 9 Genes annotated by the GO term GO:0006952. Reactions triggered in response to the presence of a foreign body or the occurrence of an injury which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack. www.broad.mit.e...
Broad TRANSMISSION_OF_NERVE_IMPULSE View Gene Set 2.748e-07 187 2.267e-05 10 Genes annotated by the GO term GO:0019226. The sequential electrochemical polarization and depolarization that travels across the membrane of a nerve cell (neuron) in response to stimulation. www.broad.mit.e...
Broad SYSTEM_DEVELOPMENT View Gene Set 4.386e-07 853 3.015e-05 11 Genes annotated by the GO term GO:0048731. The process whose specific outcome is the progression of an organismal system over time from its formation to the mature structure. A system is a regularly interacting or interdependent group of organs or tissues that work together to carry out a given biological process. www.broad.mit.e...
Broad POTASSIUM_ION_TRANSPORT View Gene Set 4.226e-07 58 3.015e-05 11 Genes annotated by the GO term GO:0006813. The directed movement of potassium ions (K+) into out of within or between cells. www.broad.mit.e...
Broad IMMUNE_RESPONSE View Gene Set 4.808e-07 232 3.051e-05 13 Genes annotated by the GO term GO:0006955. Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat. www.broad.mit.e...
Broad MULTICELLULAR_ORGANISMAL_DEVELOPMENT View Gene Set 5.876e-07 1037 3.463e-05 14 Genes annotated by the GO term GO:0007275. The biological process whose specific outcome is the progression of an organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult). www.broad.mit.e...
Broad ION_TRANSPORT View Gene Set 1.186e-06 183 6.524e-05 15 Genes annotated by the GO term GO:0006811. The directed movement of charged atoms or small charged molecules into out of within or between cells. www.broad.mit.e...
Broad G_PROTEIN_SIGNALING_COUPLED_TO_CYCLIC_NUCLEOTIDE_SECOND_MESSENGER View Gene Set 1.41e-06 98 7.269e-05 16 Genes annotated by the GO term GO:0007187. The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand followed by modulation of a nucleotide cyclase activity and a subsequent change in the concentration of a cyclic nucleotide. www.broad.mit.e...
Broad MONOVALENT_INORGANIC_CATION_TRANSPORT View Gene Set 1.7e-06 92 8.251e-05 17 Genes annotated by the GO term GO:0015672. The directed movement of inorganic cations with a valency of one into out of within or between cells. Inorganic cations are atoms or small molecules with a positive charge which do not contain carbon in covalent linkage. www.broad.mit.e...
Broad NERVOUS_SYSTEM_DEVELOPMENT View Gene Set 3.352e-06 380 0.0001456 18 Genes annotated by the GO term GO:0007399. The process whose specific outcome is the progression of nervous tissue over time from its formation to its mature state. www.broad.mit.e...
Broad SECOND_MESSENGER_MEDIATED_SIGNALING View Gene Set 3.232e-06 146 0.0001456 18 Genes annotated by the GO term GO:0019932. A series of molecular signals in which an ion or small molecule is formed or released into the cytosol thereby helping relay the signal within the cell. www.broad.mit.e...
Broad CYCLIC_NUCLEOTIDE_MEDIATED_SIGNALING View Gene Set 4.214e-06 100 0.0001738 20 Genes annotated by the GO term GO:0019935. A series of molecular signals in which a cell uses a cyclic nucleotide to convert an extracellular signal into a response. www.broad.mit.e...
Broad IMMUNE_SYSTEM_PROCESS View Gene Set 7.998e-06 326 0.0003142 21 Genes annotated by the GO term GO:0002376. Any process involved in the development or functioning of the immune system an organismal system for calibrated responses to potential internal or invasive threats. www.broad.mit.e...
Broad CATION_TRANSPORT View Gene Set 2.001e-05 145 0.0007502 22 Genes annotated by the GO term GO:0006812. The directed movement of cations atoms or small molecules with a net positive charge into out of within or between cells. www.broad.mit.e...
Broad METAL_ION_TRANSPORT View Gene Set 4.197e-05 116 0.001506 23 Genes annotated by the GO term GO:0030001. The directed movement of metal ions any metal ion with an electric charge into out of within or between cells. www.broad.mit.e...
Broad CHEMICAL_HOMEOSTASIS View Gene Set 9.484e-05 151 0.00326 24 Genes annotated by the GO term GO:0048878. The biological processes involved in the maintenance of an internal equilibrium of a chemical. www.broad.mit.e...
Broad RESPONSE_TO_EXTERNAL_STIMULUS View Gene Set 0.0001008 305 0.003325 25 Genes annotated by the GO term GO:0009605. A change in state or activity of a cell or an organism (in terms of movement secretion enzyme production gene expression etc.) as a result of an external stimulus. www.broad.mit.e...
Broad RESPONSE_TO_WOUNDING View Gene Set 0.0001098 184 0.003484 26 Genes annotated by the GO term GO:0009611. A change in state or activity of a cell or an organism (in terms of movement secretion enzyme production gene expression etc.) as a result of a stimulus indicating damage to the organism. www.broad.mit.e...
Broad CELLULAR_HOMEOSTASIS View Gene Set 0.0001256 141 0.0037 27 Genes annotated by the GO term GO:0019725. The processes involved in the maintenance of an internal equilibrium at the level of the cell. www.broad.mit.e...
Broad ION_HOMEOSTASIS View Gene Set 0.000125 124 0.0037 27 Genes annotated by the GO term GO:0050801. Any of the processes involved in the maintenance of an internal equilibrium of ions within an organism or cell. www.broad.mit.e...
Broad REGULATION_OF_BIOLOGICAL_QUALITY View Gene Set 0.0002647 406 0.00728 29 Genes annotated by the GO term GO:0065008. Any process that modulates the frequency rate or extent of a biological quality. A biological quality is a measurable attribute of an organism or part of an organism such as size mass shape color etc. www.broad.mit.e...
Broad DETECTION_OF_STIMULUS View Gene Set 0.0002582 47 0.00728 29 Genes annotated by the GO term GO:0051606. The series of events in which a stimulus is received by a cell and converted into a molecular signal. www.broad.mit.e...
Broad INFLAMMATORY_RESPONSE View Gene Set 0.0002889 124 0.007689 31 Genes annotated by the GO term GO:0006954. The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages. www.broad.mit.e...
Broad MULTI_ORGANISM_PROCESS View Gene Set 0.0006784 161 0.01749 32 Genes annotated by the GO term GO:0051704. The processes by which an organism has an effect on another organism of the same or different species. www.broad.mit.e...
Broad ANATOMICAL_STRUCTURE_MORPHOGENESIS View Gene Set 0.0008703 375 0.02112 33 Genes annotated by the GO term GO:0009653. The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form. www.broad.mit.e...
Broad G_PROTEIN_SIGNALING_COUPLED_TO_CAMP_NUCLEOTIDE_SECOND_MESSENGER View Gene Set 0.0008579 64 0.02112 33 Genes annotated by the GO term GO:0007188. The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand followed by modulation of adenylyl cyclase activity and a subsequent change in the concentration of cyclic AMP. www.broad.mit.e...
Broad HOMEOSTATIC_PROCESS View Gene Set 0.0009374 202 0.0221 35 Genes annotated by the GO term GO:0042592. The biological processes involved in the maintenance of an internal equilibrium. www.broad.mit.e...
Broad DIGESTION View Gene Set 0.001 43 0.02292 36 Genes annotated by the GO term GO:0007586. The whole of the physical chemical and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism. www.broad.mit.e...
Broad EXCRETION View Gene Set 0.001168 36 0.02482 37 Genes annotated by the GO term GO:0007588. The elimination by an organism of the waste products that arise as a result of metabolic activity. These products include water carbon dioxide (CO2) and nitrogenous compounds. www.broad.mit.e...
Broad REGULATED_SECRETORY_PATHWAY View Gene Set 0.001173 15 0.02482 37 Genes annotated by the GO term GO:0045055. The regulated secretory pathway is a second secretory pathway in which soluble proteins and other substances are initially stored in secretory vesicles for later release. It is found mainly in cells that are specialized for secreting products such as hormones neurotransmitters or digestive enzymes rapidly on demand. www.broad.mit.e...
Broad HUMORAL_IMMUNE_RESPONSE View Gene Set 0.001146 31 0.02482 37 Genes annotated by the GO term GO:0006959. An immune response mediated through a body fluid. www.broad.mit.e...
Broad DETECTION_OF_EXTERNAL_STIMULUS View Gene Set 0.001302 23 0.02619 40 Genes annotated by the GO term GO:0009581. The series of events in which an external stimulus is received by a cell and converted into a molecular signal. www.broad.mit.e...
Broad CAMP_MEDIATED_SIGNALING View Gene Set 0.001292 65 0.02619 40 Genes annotated by the GO term GO:0019933. A series of molecular signals in which a cell uses cyclic AMP to convert an extracellular signal into a response. www.broad.mit.e...
Broad DEFENSE_RESPONSE_TO_BACTERIUM View Gene Set 0.001422 24 0.02793 42 Genes annotated by the GO term GO:0042742. Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism. www.broad.mit.e...
Broad REGULATION_OF_ANATOMICAL_STRUCTURE_MORPHOGENESIS View Gene Set 0.001531 25 0.02937 43 Genes annotated by the GO term GO:0022603. Any process that modulates the frequency rate or extent of anatomical structure morphogenesis. www.broad.mit.e...
Broad REGULATION_OF_CELL_MORPHOGENESIS View Gene Set 0.001685 14 0.0316 44 Genes annotated by the GO term GO:0022604. Any process that modulates the frequency rate or extent of cell morphogenesis. Cell morphogenesis is any process that modulates the size or shape of a cell. www.broad.mit.e...
Broad NEUROTRANSMITTER_SECRETION View Gene Set 0.00192 13 0.03472 45 Genes annotated by the GO term GO:0007269. The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine noradrenaline adrenaline dopamine glycine y aminobutyrate glutamic acid substance P enkephalins endorphins and serotonin. www.broad.mit.e...
Broad CATION_HOMEOSTASIS View Gene Set 0.001936 104 0.03472 45 Genes annotated by the GO term GO:0055080. The regulation of the levels transport and metabolism of cations. www.broad.mit.e...
Broad CELLULAR_CATION_HOMEOSTASIS View Gene Set 0.001988 101 0.0349 47 Genes annotated by the GO term GO:0030003. The regulation of the levels transport and metabolism of cations within a cell or between a cell and its external environment. www.broad.mit.e...
Broad G_PROTEIN_SIGNALING_ADENYLATE_CYCLASE_INHIBITING_PATHWAY View Gene Set 0.002104 10 0.03542 48 Genes annotated by the GO term GO:0007193. The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand followed by inhibition of adenylyl cyclase and a subsequent decrease in the concentration of cyclic AMP. www.broad.mit.e...
Broad EXTRACELLULAR_STRUCTURE_ORGANIZATION_AND_BIOGENESIS View Gene Set 0.002102 32 0.03542 48 Genes annotated by the GO term GO:0043062. A process that is carried out at the cellular level which results in the formation arrangement of constituent parts or disassembly of structures in the space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane and also covers the host cell environment outside an intracellular parasite. www.broad.mit.e...
Broad REGULATION_OF_G_PROTEIN_COUPLED_RECEPTOR_PROTEIN_SIGNALING_PATHWAY View Gene Set 0.002449 23 0.04041 50 Genes annotated by the GO term GO:0008277. Any process that modulates the frequency rate or extent of G-protein coupled receptor protein signaling pathway activity. www.broad.mit.e...
Broad BEHAVIOR View Gene Set 0.002553 148 0.0413 51 Genes annotated by the GO term GO:0007610. The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions. www.broad.mit.e...
Broad CELL_MATRIX_ADHESION View Gene Set 0.002916 37 0.04627 52 Genes annotated by the GO term GO:0007160. The binding of a cell to the extracellular matrix via adhesion molecules. www.broad.mit.e...

Gene Set Collection: Broad.c5.CC

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad PLASMA_MEMBRANE_PART View Gene Set 1.85e-44 1142 4.311e-42 1 Genes annotated by the GO term GO:0044459. Any constituent part of the plasma membrane the membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. www.broad.mit.e...
Broad INTRINSIC_TO_PLASMA_MEMBRANE View Gene Set 6.605e-44 978 6.384e-42 2 Genes annotated by the GO term GO:0031226. Located in the plasma membrane such that some covalently attached portion of the gene product for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor spans or is embedded in one or both leaflets of the membrane. www.broad.mit.e...
Broad PLASMA_MEMBRANE View Gene Set 8.22e-44 1392 6.384e-42 2 Genes annotated by the GO term GO:0005886. The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. www.broad.mit.e...
Broad INTEGRAL_TO_PLASMA_MEMBRANE View Gene Set 2.063e-43 964 1.202e-41 4 Genes annotated by the GO term GO:0005887. Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. www.broad.mit.e...
Broad INTRINSIC_TO_MEMBRANE View Gene Set 1.559e-37 1319 7.264e-36 5 Genes annotated by the GO term GO:0031224. Located in a membrane such that some covalently attached portion of the gene product for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor spans or is embedded in one or both leaflets of the membrane. www.broad.mit.e...
Broad INTEGRAL_TO_MEMBRANE View Gene Set 4.034e-37 1301 1.567e-35 6 Genes annotated by the GO term GO:0016021. Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein indicates that all or part of the peptide sequence is embedded in the membrane. www.broad.mit.e...
Broad MEMBRANE_PART View Gene Set 1.001e-30 1632 3.332e-29 7 Genes annotated by the GO term GO:0044425. Any constituent part of a membrane a double layer of lipid molecules that encloses all cells and in eukaryotes many organelles; may be a single or double lipid bilayer; also includes associated proteins. www.broad.mit.e...
Broad MEMBRANE View Gene Set 2.682e-29 1939 7.812e-28 8 Genes annotated by the GO term GO:0016020. Double layer of lipid molecules that encloses all cells and in eukaryotes many organelles; may be a single or double lipid bilayer; also includes associated proteins. www.broad.mit.e...
Broad CELL_FRACTION View Gene Set 2.337e-07 484 6.05e-06 9 Genes annotated by the GO term GO:0000267. A generic term for parts of cells prepared by disruptive biochemical techniques. www.broad.mit.e...
Broad MEMBRANE_FRACTION View Gene Set 4.207e-07 333 9.803e-06 10 Genes annotated by the GO term GO:0005624. That fraction of cells prepared by disruptive biochemical methods that includes the plasma and other membranes. www.broad.mit.e...
Broad EXTRACELLULAR_REGION View Gene Set 2.387e-06 437 5.055e-05 11 Genes annotated by the GO term GO:0005576. The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite. www.broad.mit.e...
Broad VOLTAGE_GATED_POTASSIUM_CHANNEL_COMPLEX View Gene Set 2.413e-05 40 0.0004685 12 Genes annotated by the GO term GO:0008076. A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential. www.broad.mit.e...
Broad EXTRACELLULAR_REGION_PART View Gene Set 3.909e-05 331 0.0007007 13 Genes annotated by the GO term GO:0044421. Any constituent part of the extracellular region the space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers constituent parts of the host cell environment outside an intracellular parasite. www.broad.mit.e...
Broad RECEPTOR_COMPLEX View Gene Set 0.0001967 56 0.003274 14 Genes annotated by the GO term GO:0043235. Any protein group composed of two or more subunits which may or may not be identical which undergoes combination with a hormone neurotransmitter drug or intracellular messenger to initiate a change in cell function. www.broad.mit.e...
Broad INTEGRIN_COMPLEX View Gene Set 0.0004459 19 0.006926 15 Genes annotated by the GO term GO:0008305. Any member of a family of heterodimeric transmembrane receptors for cell-adhesion molecules. The alpha and beta subunits are noncovalently bonded. www.broad.mit.e...
Broad EXTRACELLULAR_SPACE View Gene Set 0.0007812 239 0.01138 16 Genes annotated by the GO term GO:0005615. That part of a multicellular organism outside the cells proper usually taken to be outside the plasma membranes and occupied by fluid. www.broad.mit.e...

Gene Set Collection: Broad.c5.MF

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad RECEPTOR_ACTIVITY View Gene Set 5.65e-22 572 2.238e-19 1 Genes annotated by the GO term GO:0004872. Combining with an extracellular or intracellular messenger to initiate a change in cell activity. www.broad.mit.e...
Broad TRANSMEMBRANE_RECEPTOR_ACTIVITY View Gene Set 5.903e-19 411 1.169e-16 2 Genes annotated by the GO term GO:0004888. Combining with an extracellular or intracellular messenger to initiate a change in cell activity and spanning to the membrane of either the cell or an organelle. www.broad.mit.e...
Broad G_PROTEIN_COUPLED_RECEPTOR_ACTIVITY View Gene Set 1.435e-11 185 1.895e-09 3 Genes annotated by the GO term GO:0004930. A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers. www.broad.mit.e...
Broad SUBSTRATE_SPECIFIC_CHANNEL_ACTIVITY View Gene Set 3.762e-11 154 3.724e-09 4 Genes annotated by the GO term GO:0022838. Catalysis of energy-independent facilitated diffusion mediated by passage of a specific solute through a transmembrane aqueous pore or channel. Stereospecificity is not exhibited but this transport may be specific for a particular molecular species or class of molecules. www.broad.mit.e...
Broad ION_CHANNEL_ACTIVITY View Gene Set 4.402e-10 147 3.486e-08 5 Genes annotated by the GO term GO:0005216. Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism. www.broad.mit.e...
Broad ION_TRANSMEMBRANE_TRANSPORTER_ACTIVITY View Gene Set 7.578e-10 275 5.001e-08 6 Genes annotated by the GO term GO:0015075. Catalysis of the transfer of an ion from one side of a membrane to the other. www.broad.mit.e...
Broad RHODOPSIN_LIKE_RECEPTOR_ACTIVITY View Gene Set 1.393e-09 131 7.878e-08 7 Genes annotated by the GO term GO:0001584. A G-protein coupled receptor that is structurally/functionally related to the rhodopsin receptor. www.broad.mit.e...
Broad GATED_CHANNEL_ACTIVITY View Gene Set 4.17e-09 121 2.064e-07 8 Genes annotated by the GO term GO:0022836. Catalysis of the transmembrane transfer of a solute by a channel that opens in response to a specific stimulus. www.broad.mit.e...
Broad TRANSMEMBRANE_TRANSPORTER_ACTIVITY View Gene Set 6.219e-09 371 2.736e-07 9 Genes annotated by the GO term GO:0022857. Catalysis of the transfer of a substance from one side of a membrane to the other. www.broad.mit.e...
Broad CATION_CHANNEL_ACTIVITY View Gene Set 2.097e-08 118 8.306e-07 10 Genes annotated by the GO term GO:0005261. Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient. www.broad.mit.e...
Broad SUBSTRATE_SPECIFIC_TRANSMEMBRANE_TRANSPORTER_ACTIVITY View Gene Set 2.927e-08 341 1.054e-06 11 Genes annotated by the GO term GO:0022891. Catalysis of the transfer of a specific substance or group of related substances from one side of a membrane to the other. www.broad.mit.e...
Broad SUBSTRATE_SPECIFIC_TRANSPORTER_ACTIVITY View Gene Set 3.24e-08 389 1.069e-06 12 Genes annotated by the GO term GO:0022892. Enables the directed movement of a specific substance or group of related substances (such as macromolecules small molecules ions) into out of within or between cells. www.broad.mit.e...
Broad CATION_TRANSMEMBRANE_TRANSPORTER_ACTIVITY View Gene Set 5.212e-08 211 1.588e-06 13 Genes annotated by the GO term GO:0008324. Catalysis of the transfer of cation from one side of the membrane to the other. www.broad.mit.e...
Broad METAL_ION_TRANSMEMBRANE_TRANSPORTER_ACTIVITY View Gene Set 1.606e-07 145 4.541e-06 14 Genes annotated by the GO term GO:0046873. Catalysis of the transfer of metal ions from one side of a membrane to the other. www.broad.mit.e...
Broad VOLTAGE_GATED_CHANNEL_ACTIVITY View Gene Set 3.183e-06 73 8.404e-05 15 Genes annotated by the GO term GO:0022832. Catalysis of the transmembrane transfer of a solute by a channel whose open state is dependent on the voltage across the membrane in which it is embedded. www.broad.mit.e...
Broad VOLTAGE_GATED_CATION_CHANNEL_ACTIVITY View Gene Set 9.282e-06 66 0.0002297 16 Genes annotated by the GO term GO:0022843. Catalysis of the transmembrane transfer of a cation by a voltage-gated channel. A cation is a positively charged ion. www.broad.mit.e...
Broad POTASSIUM_CHANNEL_ACTIVITY View Gene Set 9.93e-06 50 0.0002313 17 Genes annotated by the GO term GO:0005267. Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism. www.broad.mit.e...
Broad LIPASE_ACTIVITY View Gene Set 3.588e-05 49 0.0007894 18 Genes annotated by the GO term GO:0016298. Catalysis of the hydrolysis of a lipid or phospholipid. www.broad.mit.e...
Broad AMINE_RECEPTOR_ACTIVITY View Gene Set 4.629e-05 34 0.0009648 19 Genes annotated by the GO term GO:0008227. Combining with a biogenic amine to initiate a change in cell activity. www.broad.mit.e...
Broad NEUROTRANSMITTER_RECEPTOR_ACTIVITY View Gene Set 5.612e-05 50 0.001111 20 Genes annotated by the GO term GO:0030594. Combining with a neurotransmitter to initiate a change in cell activity. www.broad.mit.e...
Broad NEUROTRANSMITTER_BINDING View Gene Set 6.809e-05 53 0.001284 21 Genes annotated by the GO term GO:0042165. Interacting selectively with a neurotransmitter any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell. www.broad.mit.e...
Broad ANION_TRANSMEMBRANE_TRANSPORTER_ACTIVITY View Gene Set 0.0001735 59 0.00299 22 Genes annotated by the GO term GO:0008509. Catalysis of the transfer of a negatively charged ion from one side of a membrane to the other. www.broad.mit.e...
Broad PEPTIDE_RECEPTOR_ACTIVITY View Gene Set 0.0001737 50 0.00299 22 Genes annotated by the GO term GO:0001653. Combining with an extracellular or intracellular peptide to initiate a change in cell activity. www.broad.mit.e...
Broad PHOSPHOLIPASE_ACTIVITY View Gene Set 0.0002446 41 0.004036 24 Genes annotated by the GO term GO:0004620. Catalysis of the hydrolysis of a glycerophospholipid. www.broad.mit.e...
Broad VOLTAGE_GATED_POTASSIUM_CHANNEL_ACTIVITY View Gene Set 0.0003962 36 0.006276 25 Genes annotated by the GO term GO:0005249. Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel. www.broad.mit.e...
Broad EXCITATORY_EXTRACELLULAR_LIGAND_GATED_ION_CHANNEL_ACTIVITY View Gene Set 0.0005267 21 0.007725 26 Genes annotated by the GO term GO:0005231. www.broad.mit.e...
Broad EXTRACELLULAR_LIGAND_GATED_ION_CHANNEL_ACTIVITY View Gene Set 0.0005267 21 0.007725 26 Genes annotated by the GO term GO:0005230. Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts. www.broad.mit.e...
Broad PHOSPHORIC_DIESTER_HYDROLASE_ACTIVITY View Gene Set 0.0006285 39 0.008889 28 Genes annotated by the GO term GO:0008081. Catalysis of the hydrolysis of a phosphodiester to give a phosphomonoester and a free hydroxyl group. www.broad.mit.e...
Broad POTASSIUM_CHANNEL_REGULATOR_ACTIVITY View Gene Set 0.0009838 13 0.01343 29 Genes annotated by the GO term GO:0015459. www.broad.mit.e...
Broad AUXILIARY_TRANSPORT_PROTEIN_ACTIVITY View Gene Set 0.001069 25 0.01411 30 Genes annotated by the GO term GO:0015457. Facilitates transport across one or more biological membranes but do not themselves participate directly in transport. These proteins always function in conjunction with one or more established transport systems. They may provide a function connected with energy coupling to transport play a structural role in complex formation serve a biogenic or stability function or function in regulation. www.broad.mit.e...
Broad CARBOXYLESTERASE_ACTIVITY View Gene Set 0.001213 32 0.01501 31 Genes annotated by the GO term GO:0004091. Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion. www.broad.mit.e...
Broad SERINE_TYPE_ENDOPEPTIDASE_ACTIVITY View Gene Set 0.001176 39 0.01501 31 Genes annotated by the GO term GO:0004252. Catalysis of the hydrolysis of nonterminal peptide linkages in oligopeptides or polypeptides by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). www.broad.mit.e...
Broad SERINE_HYDROLASE_ACTIVITY View Gene Set 0.001372 44 0.01647 33 Genes annotated by the GO term GO:0017171. Catalysis of the hydrolysis of a substrate by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). www.broad.mit.e...
Broad VOLTAGE_GATED_CALCIUM_CHANNEL_ACTIVITY View Gene Set 0.001859 18 0.02165 34 Genes annotated by the GO term GO:0005245. Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel. www.broad.mit.e...
Broad CYTOKINE_BINDING View Gene Set 0.001963 46 0.02221 35 Genes annotated by the GO term GO:0019955. Interacting selectively with a cytokine any of a group of proteins that function to control the survival growth and differentiation of tissues and cells and which have autocrine and paracrine activity. www.broad.mit.e...
Broad SERINE_TYPE_PEPTIDASE_ACTIVITY View Gene Set 0.002317 43 0.02531 36 Genes annotated by the GO term GO:0008236. Catalysis of the hydrolysis of peptide linkages in oligopeptides or polypeptides by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). www.broad.mit.e...
Broad SECRETIN_LIKE_RECEPTOR_ACTIVITY View Gene Set 0.002365 10 0.02531 36 Genes annotated by the GO term GO:0001633. A G-protein coupled receptor that is structurally/functionally related to the secretin receptor. www.broad.mit.e...
Broad LIGAND_GATED_CHANNEL_ACTIVITY View Gene Set 0.002872 39 0.02968 38 Genes annotated by the GO term GO:0022834. Catalysis of the transmembrane transfer of a solute by a channel that opens when a specific ligand has been bound by the channel complex or one of its constituent parts. www.broad.mit.e...
Broad STRUCTURAL_CONSTITUENT_OF_MUSCLE View Gene Set 0.002923 32 0.02968 38 Genes annotated by the GO term GO:0008307. The action of a molecule that contributes to the structural integrity of a muscle fiber. www.broad.mit.e...
Broad CARBOHYDRATE_BINDING View Gene Set 0.003135 72 0.03042 40 Genes annotated by the GO term GO:0030246. Interacting selectively with any carbohydrate. www.broad.mit.e...
Broad SYMPORTER_ACTIVITY View Gene Set 0.003149 31 0.03042 40 Genes annotated by the GO term GO:0015293. Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. www.broad.mit.e...
Broad CALCIUM_ION_BINDING View Gene Set 0.003264 100 0.03078 42 Genes annotated by the GO term GO:0005509. Interacting selectively with calcium ions (Ca2+). www.broad.mit.e...
Broad ACTIVE_TRANSMEMBRANE_TRANSPORTER_ACTIVITY View Gene Set 0.003397 122 0.03129 43 Genes annotated by the GO term GO:0022804. Catalysis of the transfer of a specific substance or related group of substances from one side of a membrane to the other up the solute's concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction. www.broad.mit.e...
Broad TRANSMEMBRANE_RECEPTOR_PROTEIN_KINASE_ACTIVITY View Gene Set 0.003746 51 0.03296 44 Genes annotated by the GO term GO:0019199. www.broad.mit.e...
Broad PROTEIN_TYROSINE_KINASE_ACTIVITY View Gene Set 0.003684 64 0.03296 44 Genes annotated by the GO term GO:0004713. Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate. www.broad.mit.e...
Broad TRANSMEMBRANE_RECEPTOR_PROTEIN_TYROSINE_KINASE_ACTIVITY View Gene Set 0.004098 43 0.03528 46 Genes annotated by the GO term GO:0004714. Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate to initiate a change in cell activity. www.broad.mit.e...
Broad NEUROPEPTIDE_BINDING View Gene Set 0.004368 23 0.0353 47 Genes annotated by the GO term GO:0042923. Interacting selectively and stoichiometrically with neuropeptides peptides with direct synaptic effects (peptide neurotransmitters) or indirect modulatory effects on the nervous system (peptide neuromodulators). www.broad.mit.e...
Broad CARBONATE_DEHYDRATASE_ACTIVITY View Gene Set 0.004306 13 0.0353 47 Genes annotated by the GO term GO:0004089. Catalysis of the reaction: H2CO3 = CO2 + H2O. www.broad.mit.e...
Broad NEUROPEPTIDE_RECEPTOR_ACTIVITY View Gene Set 0.004368 22 0.0353 47 Genes annotated by the GO term GO:0008188. Combining with a neuropeptide to initiate a change in cell activity. www.broad.mit.e...
Broad NICOTINIC_ACETYLCHOLINE_ACTIVATED_CATION_SELECTIVE_CHANNEL_ACTIVITY View Gene Set 0.004915 11 0.03893 50 Genes annotated by the GO term GO:0004889. www.broad.mit.e...
Broad PHOSPHOLIPASE_A2_ACTIVITY View Gene Set 0.00529 13 0.04108 51 Genes annotated by the GO term GO:0004623. Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate. www.broad.mit.e...
Broad ANION_CATION_SYMPORTER_ACTIVITY View Gene Set 0.005704 16 0.04343 52 Genes annotated by the GO term GO:0015296. Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: anion(out) + cation(out) = anion(in) + cation(in). www.broad.mit.e...
Broad CHANNEL_REGULATOR_ACTIVITY View Gene Set 0.005916 23 0.0442 53 Genes annotated by the GO term GO:0016247. www.broad.mit.e...
Broad SECONDARY_ACTIVE_TRANSMEMBRANE_TRANSPORTER_ACTIVITY View Gene Set 0.006764 47 0.0496 54 Genes annotated by the GO term GO:0015291. Catalysis of the transfer of a solute from one side of a membrane to the other up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport symport or antiport. www.broad.mit.e...

Gene Set Collection: PMID

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
PMID 20237496 View Gene Set 2.907e-20 828 7.287e-17 1 New genetic associations detected in a host response study to hepatitis B vaccine. www.ncbi.nlm.ni...
PMID 19086053 View Gene Set 3.788e-12 301 4.748e-09 2 Identification of new putative susceptibility genes for several psychiatric disorders by association analysis of regulatory and non-synonymous SNPs of 306 genes involved in neurotransmission and neurodevelopment. www.ncbi.nlm.ni...
PMID 20424473 View Gene Set 1.082e-09 146 9.04e-07 3 L-type voltage-dependent calcium channel alpha subunit 1C is a novel candidate gene associated with secondary hyperparathyroidism: an application of haplotype-based analysis for multiple linked single nucleotide polymorphisms. www.ncbi.nlm.ni...
PMID 16335952 View Gene Set 4.34e-09 257 1.623e-06 4 Human plasma N-glycoproteome analysis by immunoaffinity subtraction hydrazide chemistry and mass spectrometry. www.ncbi.nlm.ni...
PMID 19156168 View Gene Set 4.533e-09 118 1.623e-06 4 Pharmacogenetics of antipsychotic response in the CATIE trial: a candidate gene analysis. www.ncbi.nlm.ni...
PMID 19423540 View Gene Set 4.429e-09 209 1.623e-06 4 Common variation in genes related to innate immunity and risk of adult glioma. www.ncbi.nlm.ni...
PMID 20406964 View Gene Set 4.429e-09 209 1.623e-06 4 Risk of meningioma and common variation in genes related to innate immunity. www.ncbi.nlm.ni...
PMID 20438785 View Gene Set 7.252e-09 208 2.273e-06 8 Polymorphisms in innate immunity genes and risk of childhood leukemia. www.ncbi.nlm.ni...
PMID 18240029 View Gene Set 1.062e-08 203 2.959e-06 9 Reviews in molecular biology and biotechnology: transmembrane signaling by G protein-coupled receptors. www.ncbi.nlm.ni...
PMID 19851445 View Gene Set 4.724e-08 176 1.184e-05 10 High-density SNP screening of the major histocompatibility complex in systemic lupus erythematosus demonstrates strong evidence for independent susceptibility regions. www.ncbi.nlm.ni...
PMID 19058789 View Gene Set 1.023e-07 129 2.331e-05 11 A common variant in DRD3 receptor is associated with autism spectrum disorder. www.ncbi.nlm.ni...
PMID 7539755 View Gene Set 2.458e-07 21 5.134e-05 12 Modulation of CD4 lateral interaction with lymphocyte surface molecules induced by HIV-1 gp120. www.ncbi.nlm.ni...
PMID 19861144 View Gene Set 3.299e-07 21 5.908e-05 13 Activating killer cell immunoglobulin-like receptors 3DS1 and 2DS1 protect against developing the severe form of recurrent respiratory papillomatosis. www.ncbi.nlm.ni...
PMID 20492596 View Gene Set 3.299e-07 22 5.908e-05 13 Distribution of KIR genes in the population of unrelated individuals homozygous for ancestral haplotype AH8.1 (HLA-A1B8DR3). www.ncbi.nlm.ni...
PMID 20468064 View Gene Set 4.719e-07 182 7.886e-05 15 Association study of 182 candidate genes in anorexia nervosa. www.ncbi.nlm.ni...
PMID 17868255 View Gene Set 9.664e-07 16 8.659e-05 16 No association of KIR genes with Behcet's disease. www.ncbi.nlm.ni...
PMID 18571006 View Gene Set 1.036e-06 19 8.659e-05 16 KIR and HLA gene combinations in Vogt-Koyanagi-Harada disease. www.ncbi.nlm.ni...
PMID 18778326 View Gene Set 1.036e-06 19 8.659e-05 16 Association between killer-cell immunoglobulin-like receptor genotypes and leprosy in Brazil. www.ncbi.nlm.ni...
PMID 18848853 View Gene Set 1.036e-06 19 8.659e-05 16 Killer cell immunoglobulin-like receptor gene diversity in a Southern Brazilian population from the state of ParanĂ¡. www.ncbi.nlm.ni...
PMID 19032228 View Gene Set 6.508e-07 17 8.659e-05 16 Natural killer cell receptor repertoire and their ligands and the risk of CMV infection after kidney transplantation. www.ncbi.nlm.ni...
PMID 19169284 View Gene Set 9.664e-07 17 8.659e-05 16 KIR genes and KIR ligands affect occurrence of acute GVHD after unrelated 12/12 HLA matched hematopoietic stem cell transplantation. www.ncbi.nlm.ni...
PMID 19630074 View Gene Set 1.036e-06 18 8.659e-05 16 Killer immunoglobulin-like receptor ligand HLA-Bw4 protects against multiple sclerosis. www.ncbi.nlm.ni...
PMID 19846535 View Gene Set 9.664e-07 18 8.659e-05 16 Effect of killer immunoglobulin-like receptors in the response to combined treatment in patients with chronic hepatitis C virus infection. www.ncbi.nlm.ni...
PMID 19874574 View Gene Set 6.269e-07 130 8.659e-05 16 Genetical genomic determinants of alcohol consumption in rats and humans. www.ncbi.nlm.ni...
PMID 19968064 View Gene Set 1.036e-06 17 8.659e-05 16 [Effects of killer immunoglobulin-like receptor and human leukocyte antigen class I ligand on the prognosis of related donor hematopoitic stem cell transplantation]. www.ncbi.nlm.ni...
PMID 20173784 View Gene Set 7.108e-07 17 8.659e-05 16 The beneficial impact of missing KIR ligands and absence of donor KIR2DS3 gene on outcome following unrelated hematopoietic SCT for myeloid leukemia in the Chinese population. www.ncbi.nlm.ni...
PMID 20173792 View Gene Set 1.036e-06 17 8.659e-05 16 The role of killer immunoglobulin-like receptor haplotypes on the outcome of unrelated donor haematopoietic SCT for thalassaemia. www.ncbi.nlm.ni...
PMID 20193031 View Gene Set 1.036e-06 20 8.659e-05 16 Compound KIR-HLA genotype analyses in the Iranian population by a novel PCR-SSP assay. www.ncbi.nlm.ni...
PMID 20210919 View Gene Set 8.908e-07 16 8.659e-05 16 HLA-DQA1*0505 sharing and killer immunoglobulin-like receptors in sub fertile couples: report from the 15th International Histocompatibility Workshop. www.ncbi.nlm.ni...
PMID 20519398 View Gene Set 1.036e-06 18 8.659e-05 16 Influence of HLA class I and HLA-KIR compound genotypes on HIV-2 infection and markers of disease progression in a Manjako community in West Africa. www.ncbi.nlm.ni...
PMID 18643961 View Gene Set 1.307e-06 16 9.926e-05 31 A study of the killer cell immunoglobulin-like receptor gene KIR2DS1 in a Caucasoid Brazilian population with psoriasis vulgaris. www.ncbi.nlm.ni...
PMID 19326408 View Gene Set 1.307e-06 15 9.926e-05 31 Killer cell immunoglobulin-like receptor genotype and killer cell immunoglobulin-like receptor-human leukocyte antigen C ligand compatibility affect the severity of hepatitis C virus recurrence after liver transplantation. www.ncbi.nlm.ni...
PMID 20356536 View Gene Set 1.307e-06 15 9.926e-05 31 [Killer cell immunoglobin-like receptor and its ligand gene polymorphisms in Hunan Han patients with type 1 diabetes]. www.ncbi.nlm.ni...
PMID 15896204 View Gene Set 1.957e-06 14 0.0001022 34 Distribution of killer cell immunoglobulin-like receptor genes in the Chinese Han population. www.ncbi.nlm.ni...
PMID 18668235 View Gene Set 1.957e-06 16 0.0001022 34 Asian population frequencies and haplotype distribution of killer cell immunoglobulin-like receptor (KIR) genes among Chinese Malay and Indian in Singapore. www.ncbi.nlm.ni...
PMID 19000141 View Gene Set 1.957e-06 16 0.0001022 34 Diversity of killer cell immunoglobulin-like receptor genes in Indonesian populations of Java Kalimantan Timor and Irian Jaya. www.ncbi.nlm.ni...
PMID 19218127 View Gene Set 1.957e-06 17 0.0001022 34 [Analysis of natural killer cell immunoglobulin-like receptor genes in Chinese]. www.ncbi.nlm.ni...
PMID 19279038 View Gene Set 1.957e-06 16 0.0001022 34 Influence of activating and inhibitory killer immunoglobulin-like receptors on predisposition to recurrent miscarriages. www.ncbi.nlm.ni...
PMID 19309280 View Gene Set 1.957e-06 16 0.0001022 34 Distribution of killer cell immunoglobulin-like receptor (KIR) genotypes in patients with familial Mediterranean fever. www.ncbi.nlm.ni...
PMID 19450876 View Gene Set 1.957e-06 17 0.0001022 34 Killer cell immunoglobulin-like receptor gene polymorphisms in patients with leukemia: possible association with susceptibility to the disease. www.ncbi.nlm.ni...
PMID 19527230 View Gene Set 1.957e-06 16 0.0001022 34 Activating killer cell immunoglobulin-like receptor genes' association with recurrent miscarriage. www.ncbi.nlm.ni...
PMID 19761533 View Gene Set 1.957e-06 17 0.0001022 34 Distribution of killer-cell immunoglobulin-like receptor genes in Eastern mainland Chinese Han and Taiwanese Han populations. www.ncbi.nlm.ni...
PMID 19875891 View Gene Set 1.957e-06 14 0.0001022 34 Frequencies of killer immunoglobulin-like receptor genotypes influence susceptibility to spontaneous abortion. www.ncbi.nlm.ni...
PMID 19897003 View Gene Set 1.957e-06 16 0.0001022 34 Killer cell immunoglobulin-like receptor gene-cluster 3DS1-2DL5-2DS1-2DS5 predisposes susceptibility to Vogt-Koyanagi-Harada syndrome in Japanese individuals. www.ncbi.nlm.ni...
PMID 19926642 View Gene Set 1.957e-06 15 0.0001022 34 Disparate distribution of activating and inhibitory killer cell immunoglobulin-like receptor genes in patients with systemic lupus erythematosus. www.ncbi.nlm.ni...
PMID 20082646 View Gene Set 1.957e-06 15 0.0001022 34 Killer cell immunoglobulin-like receptor gene diversity in a Caucasian population of southern Brazil. www.ncbi.nlm.ni...
PMID 20331834 View Gene Set 1.596e-06 16 0.0001022 34 Report from the killer immunoglobulin-like receptor (KIR) anthropology component of the 15th International Histocompatibility Workshop: worldwide variation in the KIR loci and further evidence for the co-evolution of KIR and HLA. www.ncbi.nlm.ni...
PMID 20483367 View Gene Set 1.596e-06 16 0.0001022 34 Role of killer cell immunoglobulin-like receptor gene content and human leukocyte antigen-C group in susceptibility to human T-lymphotropic virus 1-associated myelopathy/tropical spastic paraparesis in Peru. www.ncbi.nlm.ni...
PMID 19493232 View Gene Set 2.061e-06 15 0.0001033 49 Killer immunoglobulin-like receptors (KIR2DL2 and/or KIR2DS2) in presence of their ligand (HLA-C1 group) protect against chronic myeloid leukaemia. www.ncbi.nlm.ni...
PMID 19850842 View Gene Set 2.061e-06 15 0.0001033 49 Killer cell immunoglobulin-like receptors in HLA-B27-associated acute anterior uveitis with and without axial spondyloarthropathy. www.ncbi.nlm.ni...
PMID 19120281 View Gene Set 2.411e-06 13 0.000114 51 Different KIRs confer susceptibility and protection to adults with latent autoimmune diabetes in Latvian and Asian Indian populations. www.ncbi.nlm.ni...
PMID 19936734 View Gene Set 2.411e-06 12 0.000114 51 Distribution of killer cell immunoglobulin-like receptors (KIR) and their HLA-C ligands in two Iranian populations. www.ncbi.nlm.ni...
PMID 20200544 View Gene Set 2.377e-06 18 0.000114 51 Signatures of natural selection and coevolution between killer cell immunoglobulin-like receptors (KIR) and HLA class I genes. www.ncbi.nlm.ni...
PMID 18687225 View Gene Set 3.49e-06 13 0.0001563 54 [Study on the polymorphism of killer cell immunoglobulin like receptor (KIR) gene with systemic lupus erythematosus of North population in China]. www.ncbi.nlm.ni...
PMID 19664392 View Gene Set 3.49e-06 11 0.0001563 54 [Genotype analysis of killer cell immunoglobulin-like receptors in Graves' disease patients]. www.ncbi.nlm.ni...
PMID 20210918 View Gene Set 3.491e-06 18 0.0001563 54 Distribution of killer cell immunoglobulin-like receptor genes in the mestizo population from Venezuela. www.ncbi.nlm.ni...
PMID 20426625 View Gene Set 3.661e-06 20 0.000161 57 HLA and KIR frequencies in Sicilian Centenarians. www.ncbi.nlm.ni...
PMID 10373510 View Gene Set 3.872e-06 15 0.0001674 58 Ras-specific exchange factor GRF: oligomerization through its Dbl homology domain and calcium-dependent activation of Raf. www.ncbi.nlm.ni...
PMID 19367581 View Gene Set 3.977e-06 62 0.000169 59 Identification of neuroglycan C and interacting partners as potential susceptibility genes for schizophrenia in a Southern Chinese population. www.ncbi.nlm.ni...
PMID 14622581 View Gene Set 4.908e-06 16 0.0001953 60 The NMDA receptor is coupled to the ERK pathway by a direct interaction between NR2B and RasGRF1. www.ncbi.nlm.ni...
PMID 16403292 View Gene Set 4.827e-06 16 0.0001953 60 [Polymorphism of killer cell immunoglobulin-like receptors gene family in Zhejiang Han population]. www.ncbi.nlm.ni...
PMID 17498266 View Gene Set 4.827e-06 15 0.0001953 60 KIR genes polymorphism in Argentinean Caucasoid and Amerindian populations. www.ncbi.nlm.ni...
PMID 20371502 View Gene Set 4.873e-06 12 0.0001953 60 Association of killer cell immunoglobulin-like receptor 2DL5 with systemic lupus erythematosus and accompanying infections. www.ncbi.nlm.ni...
PMID 19421224 View Gene Set 6.423e-06 14 0.0002516 64 Multiple sclerosis associates with LILRA3 deletion in Spanish patients. www.ncbi.nlm.ni...
PMID 19489269 View Gene Set 7.731e-06 14 0.0002982 65 [Genotype and haplotype analysis of killer cell immunoglobulin-like receptors in ankylosing spondylitis]. www.ncbi.nlm.ni...
PMID 19181658 View Gene Set 7.915e-06 12 0.0003006 66 Association of killer cell immunoglobulin-like receptors with primary Sjogren's syndrome. www.ncbi.nlm.ni...
PMID 19934297 View Gene Set 8.629e-06 13 0.0003229 67 KIR and HLA genotypes are associated with disease progression and survival following autologous hematopoietic stem cell transplantation for high-risk neuroblastoma. www.ncbi.nlm.ni...
PMID 19046302 View Gene Set 9.985e-06 18 0.0003681 68 Combination of KIR 2DL2 and HLA-C1 (Asn 80) confers susceptibility to type 1 diabetes in Latvians. www.ncbi.nlm.ni...
PMID 10591208 View Gene Set 1.015e-05 299 0.0003687 69 The DNA sequence of human chromosome 22. www.ncbi.nlm.ni...
PMID 20137308 View Gene Set 1.03e-05 12 0.000369 70 [Relationship between CMV reactivation and KIR haplotype/HLA-Cw genotype in patients after unrelated-donor hematopoietic stem cell transplantation.]. www.ncbi.nlm.ni...
PMID 20503287 View Gene Set 1.118e-05 205 0.0003949 71 Interleukin-9 polymorphism in infants with respiratory syncytial virus infection: an opposite effect in boys and girls. www.ncbi.nlm.ni...
PMID 18830515 View Gene Set 1.246e-05 11 0.000434 72 Natural killer cells and immune surveillance. www.ncbi.nlm.ni...
PMID 20207982 View Gene Set 1.304e-05 15 0.0004479 73 Natural killer-cell receptor polymorphisms and posttransplantation non-Hodgkin lymphoma. www.ncbi.nlm.ni...
PMID 19683555 View Gene Set 1.597e-05 35 0.0005409 74 Role of human leukocyte antigen killer-cell immunoglobulin-like receptors and cytokine gene polymorphisms in leptospirosis. www.ncbi.nlm.ni...
PMID 8615909 View Gene Set 1.629e-05 13 0.0005444 75 Expression of Ca2+/calmodulin-dependent protein kinase types II and IV and reduced DNA synthesis due to the Ca2+/calmodulin-dependent protein kinase inhibitor KN-62 (1-[N O-bis(5-isoquinolinesulfonyl)-N-methyl-L-tyrosyl]-4-phenyl piperazine) in small cell lung carcinoma. www.ncbi.nlm.ni...
PMID 19453261 View Gene Set 1.68e-05 383 0.000554 76 High-density association study of 383 candidate genes for volumetric BMD at the femoral neck and lumbar spine among older men. www.ncbi.nlm.ni...
PMID 20331378 View Gene Set 1.758e-05 112 0.0005725 77 Large-scale candidate gene analysis of spontaneous clearance of hepatitis C virus. www.ncbi.nlm.ni...
PMID 20082482 View Gene Set 1.812e-05 29 0.0005825 78 Immunogenetic characteristics of patients with autoimmune gastritis. www.ncbi.nlm.ni...
PMID 18945962 View Gene Set 2.419e-05 14 0.0007677 79 Donors with group B KIR haplotypes improve relapse-free survival after unrelated hematopoietic cell transplantation for acute myelogenous leukemia. www.ncbi.nlm.ni...
PMID 19258923 View Gene Set 2.509e-05 205 0.0007861 80 Genetic susceptibility to respiratory syncytial virus bronchiolitis in preterm children is associated with airway remodeling genes and innate immune genes. www.ncbi.nlm.ni...
PMID 14656967 View Gene Set 2.846e-05 43 0.000881 81 Analysis of the gene-dense major histocompatibility complex class III region and its comparison to mouse. www.ncbi.nlm.ni...
PMID 17703412 View Gene Set 2.901e-05 207 0.000887 82 Genetic susceptibility to respiratory syncytial virus bronchiolitis is predominantly associated with innate immune genes. www.ncbi.nlm.ni...
PMID 19729601 View Gene Set 4.253e-05 64 0.001285 83 Candidate gene polymorphisms for ischemic stroke. www.ncbi.nlm.ni...
PMID 19263529 View Gene Set 4.31e-05 57 0.001286 84 Genetic risk factors in recurrent venous thromboembolism: A multilocus population-based prospective approach. www.ncbi.nlm.ni...
PMID 12815021 View Gene Set 4.642e-05 12 0.001353 85 Activation of peripheral NMDA receptors contributes to human pain and rat afferent discharges evoked by injection of glutamate into the masseter muscle. www.ncbi.nlm.ni...
PMID 8665664 View Gene Set 4.642e-05 12 0.001353 85 Developmental rearrangements of cortical glutamate-NMDA receptor binding sites in late human gestation. www.ncbi.nlm.ni...
PMID 12559621 View Gene Set 5.237e-05 10 0.001509 87 Assessment of killer cell immunoglobulinlike receptor expression and corresponding HLA class I phenotypes demonstrates heterogenous KIR expression independent of anticipated HLA class I ligands. www.ncbi.nlm.ni...
PMID 11827988 View Gene Set 6.844e-05 25 0.00195 88 Adapters in lymphocyte signaling. www.ncbi.nlm.ni...
PMID 20351714 View Gene Set 7.323e-05 51 0.002063 89 Poor replication of candidate genes for major depressive disorder using genome-wide association data. www.ncbi.nlm.ni...
PMID 19352218 View Gene Set 8.155e-05 28 0.002272 90 Candidate gene analysis in an on-going genome-wide association study of attention-deficit hyperactivity disorder: suggestive association signals in ADRA1A. www.ncbi.nlm.ni...
PMID 15489916 View Gene Set 8.708e-05 24 0.002399 91 Function of the Src-family kinases Lck and Fyn in T-cell development and activation. www.ncbi.nlm.ni...
PMID 11048639 View Gene Set 8.86e-05 29 0.002414 92 The mechanism of phospholipase C-gamma1 regulation. www.ncbi.nlm.ni...
PMID 17490516 View Gene Set 9.599e-05 12 0.002588 93 [Polymorphism of killer cell immunoglobulin-like receptor gene and its correlation with leukemia]. www.ncbi.nlm.ni...
PMID 19944766 View Gene Set 0.0001083 15 0.002887 94 A pilot multivariate parallel ICA study to investigate differential linkage between neural networks and genetic profiles in schizophrenia. www.ncbi.nlm.ni...
PMID 19559392 View Gene Set 0.000116 52 0.00306 95 A candidate gene association study of 77 polymorphisms in migraine. www.ncbi.nlm.ni...
PMID 18583979 View Gene Set 0.0001463 52 0.003819 96 Systematic meta-analyses and field synopsis of genetic association studies in schizophrenia: the SzGene database. www.ncbi.nlm.ni...
PMID 19131662 View Gene Set 0.0001525 64 0.003942 97 A meta-analysis of candidate gene polymorphisms and ischemic stroke in 6 study populations: association of lymphotoxin-alpha in nonhypertensive patients. www.ncbi.nlm.ni...
PMID 19578796 View Gene Set 0.0001859 152 0.004755 98 Association of genetic variants with chronic kidney disease in individuals with different lipid profiles. www.ncbi.nlm.ni...
PMID 20049410 View Gene Set 0.000203 14 0.005142 99 A functionally relevant IRF5 haplotype is associated with reduced risk to Wegener's granulomatosis. www.ncbi.nlm.ni...
PMID 17652306 View Gene Set 0.0002053 28 0.005148 100 Keeping the (kinase) party going: SLP-76 and ITK dance to the beat. www.ncbi.nlm.ni...
PMID 10574461 View Gene Set 0.0002363 75 0.005865 101 Characterization of cDNA clones selected by the GeneMark analysis from size-fractionated cDNA libraries from human brain. www.ncbi.nlm.ni...
PMID 11140838 View Gene Set 0.0002432 58 0.005978 102 A multivariate analysis of 59 candidate genes in personality traits: the temperament and character inventory. www.ncbi.nlm.ni...
PMID 15057824 View Gene Set 0.0002539 274 0.00618 103 The DNA sequence and biology of human chromosome 19. www.ncbi.nlm.ni...
PMID 19693267 View Gene Set 0.00026 16 0.006269 104 Financial and psychological risk attitudes associated with two single nucleotide polymorphisms in the nicotine receptor (CHRNA4) gene. www.ncbi.nlm.ni...
PMID 18996102 View Gene Set 0.0002777 117 0.00663 105 Physiogenomic comparison of edema and BMI in patients receiving rosiglitazone or pioglitazone. www.ncbi.nlm.ni...
PMID 19193342 View Gene Set 0.0003057 17 0.007175 106 Multiple genetic factors in olanzapine-induced weight gain in schizophrenia patients: a cohort study. www.ncbi.nlm.ni...
PMID 9481670 View Gene Set 0.0003062 16 0.007175 106 Adjacent asparagines in the NR2-subunit of the NMDA receptor channel control the voltage-dependent block by extracellular Mg2+. www.ncbi.nlm.ni...
PMID 7541827 View Gene Set 0.000322 20 0.007475 108 HIV gp120 inhibits T cell activation by interfering with expression of costimulatory molecules CD40 ligand and CD80 (B71). www.ncbi.nlm.ni...
PMID 20452482 View Gene Set 0.0003377 188 0.007766 109 Identification of fetal and maternal single nucleotide polymorphisms in candidate genes that predispose to spontaneous preterm labor with intact membranes. www.ncbi.nlm.ni...
PMID 19915574 View Gene Set 0.0003425 14 0.007805 110 Common variants at five new loci associated with early-onset inflammatory bowel disease. www.ncbi.nlm.ni...
PMID 9263011 View Gene Set 0.0003469 20 0.007835 111 gp 120s derived from four syncytium-inducing HIV-1 strains induce different patterns of CD4 association with lymphocyte surface molecules. www.ncbi.nlm.ni...
PMID 1979339 View Gene Set 0.0003955 18 0.008853 112 Human immunodeficiency virus-1 glycoproteins gp120 and gp160 specifically inhibit the CD3/T cell-antigen receptor phosphoinositide transduction pathway. www.ncbi.nlm.ni...
PMID 15340161 View Gene Set 0.0004167 264 0.009169 113 Signal peptide prediction based on analysis of experimentally verified cleavage sites. www.ncbi.nlm.ni...
PMID 18519826 View Gene Set 0.0004206 101 0.009169 113 Molecular genetics of successful smoking cessation: convergent genome-wide association study results. www.ncbi.nlm.ni...
PMID 19008959 View Gene Set 0.0004197 12 0.009169 113 The genetics of primary haemorrhagic stroke subarachnoid haemorrhage and ruptured intracranial aneurysms in adults. www.ncbi.nlm.ni...
PMID 11157797 View Gene Set 0.0004565 76 0.009866 116 Sequence structure and pathology of the fully annotated terminal 2 Mb of the short arm of human chromosome 16. www.ncbi.nlm.ni...
PMID 19956635 View Gene Set 0.0005459 108 0.0117 117 Fulfilling the promise of personalized medicine? Systematic review and field synopsis of pharmacogenetic studies. www.ncbi.nlm.ni...
PMID 10229664 View Gene Set 0.0005547 12 0.01179 118 Selective tetraspan-integrin complexes (CD81/alpha4beta1 CD151/alpha3beta1 CD151/alpha6beta1) under conditions disrupting tetraspan interactions. www.ncbi.nlm.ni...
PMID 18270970 View Gene Set 0.0006331 21 0.01334 119 Worldwide genetic variation in dopamine and serotonin pathway genes: implications for association studies. www.ncbi.nlm.ni...
PMID 8084338 View Gene Set 0.0006453 21 0.01348 120 HIV-1 gp41 binding proteins and antibodies to gp41 could inhibit enhancement of human Raji cell MHC class I and II expression by gp41. www.ncbi.nlm.ni...
PMID 9278385 View Gene Set 0.0006804 24 0.01398 121 The Tat protein of HIV-1 induces tumor necrosis factor-alpha production. Implications for HIV-1-associated neurological diseases. www.ncbi.nlm.ni...
PMID 9730685 View Gene Set 0.0006804 24 0.01398 121 HIV-1 tat molecular diversity and induction of TNF-alpha: implications for HIV-induced neurological disease. www.ncbi.nlm.ni...
PMID 15063762 View Gene Set 0.000696 32 0.01419 123 Genetic variations in humans associated with differences in the course of hepatitis C. www.ncbi.nlm.ni...
PMID 20205591 View Gene Set 0.0007634 18 0.01543 124 Host determinants of HIV-1 control in African Americans. www.ncbi.nlm.ni...
PMID 15117958 View Gene Set 0.0007787 11 0.01562 125 90-kDa ribosomal S6 kinase is a direct target for the nuclear fibroblast growth factor receptor 1 (FGFR1): role in FGFR1 signaling. www.ncbi.nlm.ni...
PMID 19479237 View Gene Set 0.0008092 57 0.0161 126 Phenotype-genotype interactions on renal function in type 2 diabetes: an analysis using structural equation modelling. www.ncbi.nlm.ni...
PMID 19948975 View Gene Set 0.0008448 229 0.01668 127 Integrative predictive model of coronary artery calcification in atherosclerosis. www.ncbi.nlm.ni...
PMID 12119179 View Gene Set 0.0009035 18 0.0177 128 Organization of focal adhesion plaques is disrupted by action of the HIV-1 protease. www.ncbi.nlm.ni...
PMID 12871600 View Gene Set 0.0009472 22 0.01827 129 Genetic risk factors for cerebrovascular disease in children with sickle cell disease: design of a case-control association study and genomewide screen. www.ncbi.nlm.ni...
PMID 19474452 View Gene Set 0.0009464 23 0.01827 129 Perioperative genomic profiles using structure-specific oligonucleotide probes. www.ncbi.nlm.ni...
PMID 19143814 View Gene Set 0.0009873 18 0.01889 131 Several loci in the HLA class III region are associated with T1D risk after adjusting for DRB1-DQB1. www.ncbi.nlm.ni...
PMID 15790807 View Gene Set 0.001054 47 0.01958 132 Transcriptional maps of 10 human chromosomes at 5-nucleotide resolution. www.ncbi.nlm.ni...
PMID 19247692 View Gene Set 0.001043 92 0.01958 132 Analyses of associations with asthma in four asthma population samples from Canada and Australia. www.ncbi.nlm.ni...
PMID 19506906 View Gene Set 0.001054 18 0.01958 132 Candidate gene studies of ADHD: a meta-analytic review. www.ncbi.nlm.ni...
PMID 8681137 View Gene Set 0.001052 25 0.01958 132 Identification of 4370 expressed sequence tags from a 3'-end-specific cDNA library of human skeletal muscle by DNA sequencing and filter hybridization. www.ncbi.nlm.ni...
PMID 20395963 View Gene Set 0.001076 26 0.01969 136 Replication of genetic association studies in asthma and related phenotypes. www.ncbi.nlm.ni...
PMID 9799793 View Gene Set 0.001071 14 0.01969 136 Large-scale sequencing of two regions in human chromosome 7q22: analysis of 650 kb of genomic sequence around the EPO and CUTL1 loci reveals 17 genes. www.ncbi.nlm.ni...
PMID 18391953 View Gene Set 0.001124 22 0.02042 138 Rare independent mutations in renal salt handling genes contribute to blood pressure variation. www.ncbi.nlm.ni...
PMID 15146195 View Gene Set 0.001147 22 0.02044 139 Time-controlled transcardiac perfusion cross-linking for the study of protein interactions in complex tissues. www.ncbi.nlm.ni...
PMID 15717291 View Gene Set 0.001133 12 0.02044 139 Support for association between ADHD and two candidate genes: NET1 and DRD1. www.ncbi.nlm.ni...
PMID 18834073 View Gene Set 0.00115 18 0.02044 139 Mucin gene expression in human laryngeal epithelia: effect of laryngopharyngeal reflux. www.ncbi.nlm.ni...
PMID 20498205 View Gene Set 0.001194 15 0.02108 142 Investigation of potential non-HLA rheumatoid arthritis susceptibility loci in a European cohort increases the evidence for nine markers. www.ncbi.nlm.ni...
PMID 8581564 View Gene Set 0.001345 11 0.02358 143 Death of cultured human neuroblastoma cells induced by HIV-1 gp120 is prevented by NMDA receptor antagonists and inhibitors of nitric oxide and cyclooxygenase. www.ncbi.nlm.ni...
PMID 10661406 View Gene Set 0.00149 18 0.02576 144 Tat competes with CIITA for the binding to P-TEFb and blocks the expression of MHC class II genes in HIV infection. www.ncbi.nlm.ni...
PMID 11118314 View Gene Set 0.00149 18 0.02576 144 Reciprocal modulation of transcriptional activities between HIV-1 Tat and MHC class II transactivator CIITA. www.ncbi.nlm.ni...
PMID 9745929 View Gene Set 0.001502 25 0.02579 146 Mechanisms of prionSc- and HIV-1 gp120 induced neuronal cell death. www.ncbi.nlm.ni...
PMID 11904677 View Gene Set 0.001512 10 0.02579 147 Distinctive KIR and HLA diversity in a panel of north Indian Hindus. www.ncbi.nlm.ni...
PMID 12427289 View Gene Set 0.001642 20 0.02781 148 HIV-1 gp120 modulates the immunological function and expression of accessory and co-stimulatory molecules of monocyte-derived dendritic cells. www.ncbi.nlm.ni...
PMID 10662545 View Gene Set 0.001675 10 0.02818 149 Physical map of 17p13 and the genes adjacent to p53. www.ncbi.nlm.ni...
PMID 20219786 View Gene Set 0.001723 15 0.02881 150 The role of rheumatoid arthritis genetic susceptibility markers in the prediction of erosive disease in patients with early inflammatory polyarthritis: results from the Norfolk Arthritis Register. www.ncbi.nlm.ni...
PMID 19095219 View Gene Set 0.001748 19 0.02903 151 Variation in catechol-O-methyltransferase is associated with duloxetine response in a clinical trial for major depressive disorder. www.ncbi.nlm.ni...
PMID 19336475 View Gene Set 0.001815 76 0.02993 152 Integrated associations of genotypes with multiple blood biomarkers linked to coronary heart disease risk. www.ncbi.nlm.ni...
PMID 15461802 View Gene Set 0.001849 293 0.03029 153 A genome annotation-driven approach to cloning the human ORFeome. www.ncbi.nlm.ni...
PMID 10716726 View Gene Set 0.002024 80 0.03296 154 Large exons encoding multiple ectodomains are a characteristic feature of protocadherin genes. www.ncbi.nlm.ni...
PMID 18198266 View Gene Set 0.002143 14 0.03444 155 No significant association of 14 candidate genes with schizophrenia in a large European ancestry sample: implications for psychiatric genetics. www.ncbi.nlm.ni...
PMID 19339270 View Gene Set 0.00214 59 0.03444 155 Genetic associations of 115 polymorphisms with cancers of the upper aerodigestive tract across 10 European countries: the ARCAGE project. www.ncbi.nlm.ni...
PMID 16481105 View Gene Set 0.002339 11 0.03734 157 Effects of SDF-1alpha and gp120IIIB on apoptotic pathways in SK-N-SH neuroblastoma cells. www.ncbi.nlm.ni...
PMID 15749123 View Gene Set 0.002364 14 0.03752 158 Ethanol potentiates HIV-1 gp120-induced apoptosis in human neurons via both the death receptor and NMDA receptor pathways. www.ncbi.nlm.ni...
PMID 10493829 View Gene Set 0.00256 91 0.03986 159 Genome duplications and other features in 12 Mb of DNA sequence from human chromosome 16p and 16q. www.ncbi.nlm.ni...
PMID 10817752 View Gene Set 0.002528 73 0.03986 159 Cadherin superfamily genes: functions genomic organization and neurologic diversity. www.ncbi.nlm.ni...
PMID 12419832 View Gene Set 0.002551 16 0.03986 159 A pharmacogenetic study to investigate the role of dietary carcinogens in the etiology of colorectal cancer. www.ncbi.nlm.ni...
PMID 16199891 View Gene Set 0.002597 18 0.0402 162 Comparative proteomic analysis of intra- and interindividual variation in human cerebrospinal fluid. www.ncbi.nlm.ni...
PMID 20078877 View Gene Set 0.002615 14 0.04022 163 Gene polymorphisms in association with emerging cardiovascular risk markers in adult women. www.ncbi.nlm.ni...
PMID 18974840 View Gene Set 0.00273 33 0.04173 164 Identification of novel single nucleotide polymorphisms in inflammatory genes as risk factors associated with trachomatous trichiasis. www.ncbi.nlm.ni...
PMID 20346360 View Gene Set 0.002799 94 0.04253 165 Genetic risk factors for hepatopulmonary syndrome in patients with advanced liver disease. www.ncbi.nlm.ni...
PMID 17690329 View Gene Set 0.002822 10 0.04262 166 IL10 polymorphisms are associated with airflow obstruction in severe alpha1-antitrypsin deficiency. www.ncbi.nlm.ni...
PMID 15167446 View Gene Set 0.002946 22 0.04423 167 Genetic analysis of 22 candidate genes for hypertension in the Japanese population. www.ncbi.nlm.ni...
PMID 18079067 View Gene Set 0.003047 13 0.04547 168 Genetic evaluation of the serotonergic system in chronic fatigue syndrome. www.ncbi.nlm.ni...
PMID 18513389 View Gene Set 0.003094 35 0.04589 169 New application of intelligent agents in sporadic amyotrophic lateral sclerosis identifies unexpected specific genetic background. www.ncbi.nlm.ni...
PMID 12975309 View Gene Set 0.003132 1000 0.04619 170 The secreted protein discovery initiative (SPDI) a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment. www.ncbi.nlm.ni...
PMID 11751963 View Gene Set 0.00339 21 0.04954 171 Native HIV-1 Tat protein targets monocyte-derived dendritic cells and enhances their maturation function and antigen-specific T cell responses. www.ncbi.nlm.ni...
PMID 17373692 View Gene Set 0.003399 19 0.04954 171 No evidence for association between 19 cholinergic genes and bipolar disorder. www.ncbi.nlm.ni...

Gene Set Collection: ChromosomalTiles5Mb

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null chr6_30-35Mb View Gene Set 6.535e-07 127 0.000728 1 Genomic tile: chr6 ; 30000001-35000001 Mb genome.ucsc.edu...
Null chr19_47.5-52.5Mb View Gene Set 9.456e-06 80 0.005267 2 Genomic tile: chr19 ; 47500001-52500001 Mb genome.ucsc.edu...
Null chr12_5-10Mb View Gene Set 2.453e-05 66 0.008943 3 Genomic tile: chr12 ; 5000001-10000001 Mb genome.ucsc.edu...
Null chr3_47.5-52.5Mb View Gene Set 3.211e-05 94 0.008943 3 Genomic tile: chr3 ; 47500001-52500001 Mb genome.ucsc.edu...
Null chr19_50-55Mb View Gene Set 4.943e-05 112 0.01101 5 Genomic tile: chr19 ; 50000001-55000001 Mb genome.ucsc.edu...
Null chr16_27.5-32.5Mb View Gene Set 0.0001222 76 0.02269 6 Genomic tile: chr16 ; 27500001-32500001 Mb genome.ucsc.edu...
Null chr12_50-55Mb View Gene Set 0.0001948 87 0.02752 7 Genomic tile: chr12 ; 50000001-55000001 Mb genome.ucsc.edu...
Null chr16_30-35Mb View Gene Set 0.0002086 46 0.02752 7 Genomic tile: chr16 ; 30000001-35000001 Mb genome.ucsc.edu...
Null chr16_55-60Mb View Gene Set 0.0002563 46 0.02752 7 Genomic tile: chr16 ; 55000001-60000001 Mb genome.ucsc.edu...
Null chr6_27.5-32.5Mb View Gene Set 0.0002409 99 0.02752 7 Genomic tile: chr6 ; 27500001-32500001 Mb genome.ucsc.edu...
Null chrX_65-70Mb View Gene Set 0.0002717 23 0.02752 7 Genomic tile: chrX ; 65000001-70000001 Mb genome.ucsc.edu...
Null chr8_20-25Mb View Gene Set 0.0004732 40 0.04393 12 Genomic tile: chr8 ; 20000001-25000001 Mb genome.ucsc.edu...
Null chr12_47.5-52.5Mb View Gene Set 0.0005582 84 0.04442 13 Genomic tile: chr12 ; 47500001-52500001 Mb genome.ucsc.edu...
Null chr1_155-160Mb View Gene Set 0.0005295 70 0.04442 13 Genomic tile: chr1 ; 155000001-160000001 Mb genome.ucsc.edu...
Null chr11_62.5-67.5Mb View Gene Set 0.0006698 119 0.04975 15 Genomic tile: chr11 ; 62500001-67500001 Mb genome.ucsc.edu...

Gene Set Collection: Prosite

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null PS50835 View Gene Set 6.37e-22 658 4.682e-19 1 IG_LIKE expasy.org/pros...
Null PS00237 View Gene Set 4.028e-13 555 1.094e-10 2 G_PROTEIN_RECEP_F1_1 expasy.org/pros...
Null PS50262 View Gene Set 4.465e-13 765 1.094e-10 2 G_PROTEIN_RECEP_F1_2 expasy.org/pros...
Null PS50240 View Gene Set 2.769e-07 122 5.087e-05 4 TRYPSIN_DOM expasy.org/pros...
Null PS50026 View Gene Set 1.053e-06 207 0.0001548 5 EGF_3 expasy.org/pros...
Null PS00290 View Gene Set 1.311e-06 86 0.0001607 6 IG_MHC expasy.org/pros...
Null PS01186 View Gene Set 8.081e-06 171 0.0008485 7 EGF_2 expasy.org/pros...
Null PS50853 View Gene Set 1.175e-05 181 0.00108 8 FN3 expasy.org/pros...
Null PS00135 View Gene Set 2.159e-05 99 0.001763 9 TRYPSIN_SER expasy.org/pros...
Null PS00134 View Gene Set 4.692e-05 104 0.003449 10 TRYPSIN_HIS expasy.org/pros...
Null PS01187 View Gene Set 5.272e-05 99 0.003523 11 EGF_CA expasy.org/pros...
Null PS00027 View Gene Set 0.0001135 197 0.00695 12 HOMEOBOX_1 expasy.org/pros...
Null PS50071 View Gene Set 0.0001734 264 0.008495 13 HOMEOBOX_2 expasy.org/pros...
Null PS50923 View Gene Set 0.0001554 57 0.008495 13 SUSHI expasy.org/pros...
Null PS51055 View Gene Set 0.0001655 8 0.008495 13 ITAM_1 expasy.org/pros...
Null PS50132 View Gene Set 0.000233 36 0.0107 16 RGS expasy.org/pros...
Null PS50268 View Gene Set 0.0002521 119 0.0109 17 CADHERIN_2 expasy.org/pros...
Null PS01286 View Gene Set 0.000286 20 0.01168 18 FA58C_2 expasy.org/pros...
Null PS01285 View Gene Set 0.0003217 22 0.01182 19 FA58C_1 expasy.org/pros...
Null PS50022 View Gene Set 0.0003217 25 0.01182 19 FA58C_3 expasy.org/pros...
Null PS00022 View Gene Set 0.0004002 151 0.01401 21 EGF_1 expasy.org/pros...
Null PS00236 View Gene Set 0.000458 45 0.0153 22 NEUROTR_ION_CHANNEL expasy.org/pros...
Null PS51004 View Gene Set 0.0005061 31 0.01617 23 SEMA expasy.org/pros...
Null PS50001 View Gene Set 0.0005491 110 0.01682 24 SH2 expasy.org/pros...
Null PS50024 View Gene Set 0.0006301 19 0.01853 25 SEA expasy.org/pros...
Null PS50222 View Gene Set 0.0007751 231 0.02191 26 EF_HAND_2 expasy.org/pros...
Null PS50092 View Gene Set 0.0008396 68 0.02285 27 TSP1 expasy.org/pros...
Null PS00018 View Gene Set 0.000943 183 0.02475 28 EF_HAND_1 expasy.org/pros...
Null PS00010 View Gene Set 0.001021 103 0.02543 29 ASX_HYDROXYL expasy.org/pros...
Null PS00109 View Gene Set 0.001038 98 0.02543 29 PROTEIN_KINASE_TYR expasy.org/pros...
Null PS50041 View Gene Set 0.001481 88 0.03512 31 C_TYPE_LECTIN_2 expasy.org/pros...
Null PS00232 View Gene Set 0.001768 112 0.04061 32 CADHERIN_1 expasy.org/pros...
Null PS00031 View Gene Set 0.002272 46 0.04911 33 NUCLEAR_REC_DBD_1 expasy.org/pros...
Null PS51030 View Gene Set 0.002272 46 0.04911 33 NUCLEAR_REC_DBD_2 expasy.org/pros...

Gene Set Collection: pathwayCommons.nci-nature

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null Downstream signaling in na&#xef;ve CD8+ T cells View Gene Set 3.476e-05 67 0.006466 1 NCI_NATURE - Downstream signaling in na&#xef;ve CD8+ T cells gene set www.pathwaycomm...
Null IL4-mediated signaling events View Gene Set 9.179e-05 62 0.008537 2 NCI_NATURE - IL4-mediated signaling events gene set www.pathwaycomm...
Null a4b1 and a4b7 Integrin signaling View Gene Set 0.0003505 28 0.02173 3 NCI_NATURE - a4b1 and a4b7 Integrin signaling gene set www.pathwaycomm...
Null TCR signaling in na&#xef;ve CD8+ T cells View Gene Set 0.0007771 129 0.02993 4 NCI_NATURE - TCR signaling in na&#xef;ve CD8+ T cells gene set www.pathwaycomm...
Null Paxillin-independent events mediated by a4b1 and a4b7 View Gene Set 0.0008046 24 0.02993 4 NCI_NATURE - Paxillin-independent events mediated by a4b1 and a4b7 gene set www.pathwaycomm...

Gene Set Collection: pathwayCommons.reactome

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null Signaling by GPCR View Gene Set 8.027e-16 802 8.966e-13 1 REACTOME - Signaling by GPCR gene set www.pathwaycomm...
Null GPCR ligand binding View Gene Set 1.24e-13 339 6.924e-11 2 REACTOME - GPCR ligand binding gene set www.pathwaycomm...
Null Class A/1 (Rhodopsin-like receptors) View Gene Set 2.603e-13 277 9.691e-11 3 REACTOME - Class A/1 (Rhodopsin-like receptors) gene set www.pathwaycomm...
Null Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell View Gene Set 1.716e-08 60 3.833e-06 4 REACTOME - Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell gene set www.pathwaycomm...
Null GPCR downstream signaling View Gene Set 1.662e-08 595 3.833e-06 4 REACTOME - GPCR downstream signaling gene set www.pathwaycomm...
Null Peptide ligand-binding receptors View Gene Set 2.358e-08 167 4.39e-06 6 REACTOME - Peptide ligand-binding receptors gene set www.pathwaycomm...
Null Synaptic Transmission View Gene Set 1.203e-07 134 1.919e-05 7 REACTOME - Synaptic Transmission gene set www.pathwaycomm...
Null Transmission across Chemical Synapses View Gene Set 1.81e-07 129 2.528e-05 8 REACTOME - Transmission across Chemical Synapses gene set www.pathwaycomm...
Null G alpha (q) signalling events View Gene Set 2.713e-06 121 0.0003368 9 REACTOME - G alpha (q) signalling events gene set www.pathwaycomm...
Null Signaling in Immune system View Gene Set 4.65e-06 404 0.0005194 10 REACTOME - Signaling in Immune system gene set www.pathwaycomm...
Null Hemostasis View Gene Set 9.642e-06 394 0.0009791 11 REACTOME - Hemostasis gene set www.pathwaycomm...
Null Neuroransmitter Receptor Binding And Downstream Transmission In The Postsynaptic Cell View Gene Set 1.87e-05 95 0.001741 12 REACTOME - Neuroransmitter Receptor Binding And Downstream Transmission In The Postsynaptic Cell gene set www.pathwaycomm...
Null Formation of Platelet plug View Gene Set 2.099e-05 206 0.001803 13 REACTOME - Formation of Platelet plug gene set www.pathwaycomm...
Null Unblocking of NMDA receptor glutamate binding and activation View Gene Set 2.815e-05 16 0.002246 14 REACTOME - Unblocking of NMDA receptor glutamate binding and activation gene set www.pathwaycomm... glutamate bindi...
Null Ras activation uopn Ca2+ infux through NMDA receptor View Gene Set 3.178e-05 17 0.002367 15 REACTOME - Ras activation uopn Ca2+ infux through NMDA receptor gene set www.pathwaycomm...
Null Nitric oxide stimulates guanylate cyclase View Gene Set 4.25e-05 22 0.002967 16 REACTOME - Nitric oxide stimulates guanylate cyclase gene set www.pathwaycomm...
Null Chemokine receptors bind chemokines View Gene Set 5.327e-05 42 0.0035 17 REACTOME - Chemokine receptors bind chemokines gene set www.pathwaycomm...
Null Platelet Activation View Gene Set 6.069e-05 164 0.003766 18 REACTOME - Platelet Activation gene set www.pathwaycomm...
Null Platelet homeostasis View Gene Set 0.0001169 50 0.005934 19 REACTOME - Platelet homeostasis gene set www.pathwaycomm...
Null Activation of AMPA receptors View Gene Set 0.0001066 11 0.005934 19 REACTOME - Activation of AMPA receptors gene set www.pathwaycomm...
Null Interferon alpha/beta signaling View Gene Set 0.0001147 65 0.005934 19 REACTOME - Interferon alpha/beta signaling gene set www.pathwaycomm...
Null Amine ligand-binding receptors View Gene Set 0.0001045 36 0.005934 19 REACTOME - Amine ligand-binding receptors gene set www.pathwaycomm...
Null Transport of inorganic cations/anions and amino acids/oligopeptides View Gene Set 0.000198 94 0.009616 23 REACTOME - Transport of inorganic cations/anions and amino acids/oligopeptides gene set www.pathwaycomm...
Null CREB phosphorylation through the activation of CaMKII View Gene Set 0.0002167 17 0.00979 24 REACTOME - CREB phosphorylation through the activation of CaMKII gene set www.pathwaycomm...
Null Interferon Signaling View Gene Set 0.0002191 86 0.00979 24 REACTOME - Interferon Signaling gene set www.pathwaycomm...
Null Cell surface interactions at the vascular wall View Gene Set 0.0002878 76 0.01191 26 REACTOME - Cell surface interactions at the vascular wall gene set www.pathwaycomm...
Null NCAM1 interactions View Gene Set 0.0002838 23 0.01191 26 REACTOME - NCAM1 interactions gene set www.pathwaycomm...
Null cGMP effects View Gene Set 0.0003829 16 0.01433 28 REACTOME - cGMP effects gene set www.pathwaycomm...
Null Post NMDA receptor activation events View Gene Set 0.0004106 34 0.01433 28 REACTOME - Post NMDA receptor activation events gene set www.pathwaycomm...
Null CREB phosphorylation through the activation of Ras View Gene Set 0.0004021 28 0.01433 28 REACTOME - CREB phosphorylation through the activation of Ras gene set www.pathwaycomm...
Null Activation of NMDA receptor upon glutamate binding and postsynaptic events View Gene Set 0.0004106 34 0.01433 28 REACTOME - Activation of NMDA receptor upon glutamate binding and postsynaptic events gene set www.pathwaycomm...
Null Translocation of ZAP-70 to Immunological synapse View Gene Set 0.0003724 11 0.01433 28 REACTOME - Translocation of ZAP-70 to Immunological synapse gene set www.pathwaycomm...
Null Transmembrane transport of small molecules View Gene Set 0.0004932 367 0.01636 33 REACTOME - Transmembrane transport of small molecules gene set www.pathwaycomm...
Null Aquaporin-mediated transport View Gene Set 0.000498 28 0.01636 33 REACTOME - Aquaporin-mediated transport gene set www.pathwaycomm...
Null Axon guidance View Gene Set 0.0007041 225 0.02247 35 REACTOME - Axon guidance gene set www.pathwaycomm...
Null Signal transduction by L1 View Gene Set 0.0008456 35 0.02624 36 REACTOME - Signal transduction by L1 gene set www.pathwaycomm...
Null Interaction between L1 and Ankyrins View Gene Set 0.0009244 14 0.02791 37 REACTOME - Interaction between L1 and Ankyrins gene set www.pathwaycomm...
Null Glutamate Binding Activation of AMPA Receptors and Synaptic Plasticity View Gene Set 0.001163 27 0.0342 38 REACTOME - Glutamate Binding Activation of AMPA Receptors and Synaptic Plasticity gene set www.pathwaycomm... Activation of A...
Null Interferon gamma signaling View Gene Set 0.001412 48 0.04043 39 REACTOME - Interferon gamma signaling gene set www.pathwaycomm...

Gene Set Collection: miranda.targets

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null hsa-miR-1207-5p View Gene Set 2.476e-37 2608 1.676e-34 1 microRNA targets for hsa-miR-1207-5p from miranda.targets www.mirbase.org...
Null hsa-miR-423-5p View Gene Set 1.065e-32 1898 3.605e-30 2 microRNA targets for hsa-miR-423-5p from miranda.targets www.mirbase.org...
Null hsa-miR-608 View Gene Set 1.483e-29 2815 3.348e-27 3 microRNA targets for hsa-miR-608 from miranda.targets www.mirbase.org...
Null hsa-miR-939 View Gene Set 2.821e-29 2203 4.774e-27 4 microRNA targets for hsa-miR-939 from miranda.targets www.mirbase.org...
Null hsa-miR-486-3p View Gene Set 5.694e-28 1921 6.425e-26 5 microRNA targets for hsa-miR-486-3p from miranda.targets www.mirbase.org...
Null hsa-miR-661 View Gene Set 4.89e-28 2076 6.425e-26 5 microRNA targets for hsa-miR-661 from miranda.targets www.mirbase.org...
Null hsa-miR-331-3p View Gene Set 1.577e-27 1191 1.525e-25 7 microRNA targets for hsa-miR-331-3p from miranda.targets www.mirbase.org...
Null hsa-miR-637 View Gene Set 8.849e-26 2291 7.489e-24 8 microRNA targets for hsa-miR-637 from miranda.targets www.mirbase.org...
Null hsa-miR-296-5p View Gene Set 3.273e-24 887 2.462e-22 9 microRNA targets for hsa-miR-296-5p from miranda.targets www.mirbase.org...
Null hsa-miR-663 View Gene Set 3.607e-22 993 2.442e-20 10 microRNA targets for hsa-miR-663 from miranda.targets www.mirbase.org...
Null hsa-miR-665 View Gene Set 3.469e-21 1901 2.135e-19 11 microRNA targets for hsa-miR-665 from miranda.targets www.mirbase.org...
Null hsa-miR-615-5p View Gene Set 5.413e-19 1189 3.054e-17 12 microRNA targets for hsa-miR-615-5p from miranda.targets www.mirbase.org...
Null hsa-miR-744 View Gene Set 1.357e-18 797 7.065e-17 13 microRNA targets for hsa-miR-744 from miranda.targets www.mirbase.org...
Null hsa-miR-654-5p View Gene Set 3.073e-17 1123 1.486e-15 14 microRNA targets for hsa-miR-654-5p from miranda.targets www.mirbase.org...
Null hsa-miR-324-3p View Gene Set 1.029e-16 1277 4.643e-15 15 microRNA targets for hsa-miR-324-3p from miranda.targets www.mirbase.org...
Null hsa-miR-541 View Gene Set 3.474e-16 1275 1.47e-14 16 microRNA targets for hsa-miR-541 from miranda.targets www.mirbase.org...
Null hsa-miR-1225-3p View Gene Set 2.718e-15 950 1.082e-13 17 microRNA targets for hsa-miR-1225-3p from miranda.targets www.mirbase.org...
Null hsa-miR-1266 View Gene Set 3.337e-15 2015 1.255e-13 18 microRNA targets for hsa-miR-1266 from miranda.targets www.mirbase.org...
Null hsa-miR-1291 View Gene Set 6.151e-15 1386 2.192e-13 19 microRNA targets for hsa-miR-1291 from miranda.targets www.mirbase.org...
Null hsa-miR-940 View Gene Set 1.654e-14 1873 5.599e-13 20 microRNA targets for hsa-miR-940 from miranda.targets www.mirbase.org...
Null hsa-miR-326 View Gene Set 4.16e-14 1567 1.341e-12 21 microRNA targets for hsa-miR-326 from miranda.targets www.mirbase.org...
Null hsa-miR-760 View Gene Set 4.722e-14 1689 1.453e-12 22 microRNA targets for hsa-miR-760 from miranda.targets www.mirbase.org...
Null hsa-miR-328 View Gene Set 7.005e-14 1308 2.062e-12 23 microRNA targets for hsa-miR-328 from miranda.targets www.mirbase.org...
Null hsa-miR-1296 View Gene Set 8.438e-14 949 2.38e-12 24 microRNA targets for hsa-miR-1296 from miranda.targets www.mirbase.org...
Null hsa-miR-330-5p View Gene Set 2.028e-13 1945 5.492e-12 25 microRNA targets for hsa-miR-330-5p from miranda.targets www.mirbase.org...
Null hsa-miR-1233 View Gene Set 2.545e-13 824 6.628e-12 26 microRNA targets for hsa-miR-1233 from miranda.targets www.mirbase.org...
Null hsa-miR-765 View Gene Set 4.241e-13 2575 1.063e-11 27 microRNA targets for hsa-miR-765 from miranda.targets www.mirbase.org...
Null hsa-miR-612 View Gene Set 1.24e-12 2298 2.999e-11 28 microRNA targets for hsa-miR-612 from miranda.targets www.mirbase.org...
Null hsa-miR-361-3p View Gene Set 2.298e-12 1615 5.364e-11 29 microRNA targets for hsa-miR-361-3p from miranda.targets www.mirbase.org...
Null hsa-miR-874 View Gene Set 3.074e-12 1222 6.937e-11 30 microRNA targets for hsa-miR-874 from miranda.targets www.mirbase.org...
Null hsa-miR-1224-3p View Gene Set 5.346e-12 1415 1.168e-10 31 microRNA targets for hsa-miR-1224-3p from miranda.targets www.mirbase.org...
Null hsa-miR-1321 View Gene Set 6.492e-12 1850 1.374e-10 32 microRNA targets for hsa-miR-1321 from miranda.targets www.mirbase.org...
Null hsa-miR-296-3p View Gene Set 9.117e-12 1695 1.87e-10 33 microRNA targets for hsa-miR-296-3p from miranda.targets www.mirbase.org...
Null hsa-miR-766 View Gene Set 2.783e-11 1609 5.542e-10 34 microRNA targets for hsa-miR-766 from miranda.targets www.mirbase.org...
Null hsa-miR-149 View Gene Set 3.746e-11 1693 7.245e-10 35 microRNA targets for hsa-miR-149 from miranda.targets www.mirbase.org...
Null hsa-miR-1249 View Gene Set 4.166e-11 586 7.835e-10 36 microRNA targets for hsa-miR-1249 from miranda.targets www.mirbase.org...
Null hsa-miR-1275 View Gene Set 5.666e-11 1509 1.037e-09 37 microRNA targets for hsa-miR-1275 from miranda.targets www.mirbase.org...
Null hsa-miR-663b View Gene Set 8.261e-11 871 1.472e-09 38 microRNA targets for hsa-miR-663b from miranda.targets www.mirbase.org...
Null hsa-miR-339-5p View Gene Set 1.558e-10 1258 2.705e-09 39 microRNA targets for hsa-miR-339-5p from miranda.targets www.mirbase.org...
Null hsa-miR-491-5p View Gene Set 1.726e-10 1297 2.921e-09 40 microRNA targets for hsa-miR-491-5p from miranda.targets www.mirbase.org...
Null hsa-miR-485-5p View Gene Set 8.303e-10 1753 1.371e-08 41 microRNA targets for hsa-miR-485-5p from miranda.targets www.mirbase.org...
Null hsa-miR-671-5p View Gene Set 1.171e-09 1578 1.888e-08 42 microRNA targets for hsa-miR-671-5p from miranda.targets www.mirbase.org...
Null hsa-miR-1234 View Gene Set 1.839e-09 510 2.895e-08 43 microRNA targets for hsa-miR-1234 from miranda.targets www.mirbase.org...
Null hsa-miR-920 View Gene Set 2.016e-09 1404 3.102e-08 44 microRNA targets for hsa-miR-920 from miranda.targets www.mirbase.org...
Null hsa-miR-1207-3p View Gene Set 3.334e-09 1414 5.016e-08 45 microRNA targets for hsa-miR-1207-3p from miranda.targets www.mirbase.org...
Null hsa-miR-24 View Gene Set 4.729e-09 1562 6.96e-08 46 microRNA targets for hsa-miR-24 from miranda.targets www.mirbase.org...
Null hsa-miR-1203 View Gene Set 5.299e-09 503 7.633e-08 47 microRNA targets for hsa-miR-1203 from miranda.targets www.mirbase.org...
Null hsa-miR-1260 View Gene Set 1.143e-08 1133 1.612e-07 48 microRNA targets for hsa-miR-1260 from miranda.targets www.mirbase.org...
Null hsa-miR-125b View Gene Set 2.824e-08 1145 3.824e-07 49 microRNA targets for hsa-miR-125b from miranda.targets www.mirbase.org...
Null hsa-miR-214 View Gene Set 2.812e-08 2160 3.824e-07 49 microRNA targets for hsa-miR-214 from miranda.targets www.mirbase.org...
Null hsa-miR-484 View Gene Set 4.694e-08 1263 6.231e-07 51 microRNA targets for hsa-miR-484 from miranda.targets www.mirbase.org...
Null hsa-miR-1247 View Gene Set 1.367e-07 575 1.689e-06 52 microRNA targets for hsa-miR-1247 from miranda.targets www.mirbase.org...
Null hsa-miR-1268 View Gene Set 1.378e-07 508 1.689e-06 52 microRNA targets for hsa-miR-1268 from miranda.targets www.mirbase.org...
Null hsa-miR-1827 View Gene Set 1.317e-07 1819 1.689e-06 52 microRNA targets for hsa-miR-1827 from miranda.targets www.mirbase.org...
Null hsa-miR-675 View Gene Set 1.397e-07 528 1.689e-06 52 microRNA targets for hsa-miR-675 from miranda.targets www.mirbase.org...
Null hsa-miR-886-5p View Gene Set 1.369e-07 504 1.689e-06 52 microRNA targets for hsa-miR-886-5p from miranda.targets www.mirbase.org...
Null hsa-miR-885-3p View Gene Set 2.518e-07 989 2.991e-06 57 microRNA targets for hsa-miR-885-3p from miranda.targets www.mirbase.org...
Null hsa-miR-151-5p View Gene Set 2.813e-07 625 3.283e-06 58 microRNA targets for hsa-miR-151-5p from miranda.targets www.mirbase.org...
Null hsa-miR-1293 View Gene Set 4.539e-07 1294 5.208e-06 59 microRNA targets for hsa-miR-1293 from miranda.targets www.mirbase.org...
Null hsa-miR-1182 View Gene Set 6.44e-07 1715 7.266e-06 60 microRNA targets for hsa-miR-1182 from miranda.targets www.mirbase.org...
Null hsa-miR-1254 View Gene Set 1.231e-06 1726 1.367e-05 61 microRNA targets for hsa-miR-1254 from miranda.targets www.mirbase.org...
Null hsa-miR-146b-3p View Gene Set 1.367e-06 1049 1.493e-05 62 microRNA targets for hsa-miR-146b-3p from miranda.targets www.mirbase.org...
Null hsa-miR-638 View Gene Set 1.511e-06 515 1.624e-05 63 microRNA targets for hsa-miR-638 from miranda.targets www.mirbase.org...
Null hsa-miR-324-5p View Gene Set 2.173e-06 869 2.299e-05 64 microRNA targets for hsa-miR-324-5p from miranda.targets www.mirbase.org...
Null hsa-miR-504 View Gene Set 2.414e-06 939 2.514e-05 65 microRNA targets for hsa-miR-504 from miranda.targets www.mirbase.org...
Null hsa-miR-1292 View Gene Set 2.58e-06 665 2.647e-05 66 microRNA targets for hsa-miR-1292 from miranda.targets www.mirbase.org...
Null hsa-miR-623 View Gene Set 3.18e-06 1227 3.213e-05 67 microRNA targets for hsa-miR-623 from miranda.targets www.mirbase.org...
Null hsa-miR-658 View Gene Set 3.399e-06 1103 3.384e-05 68 microRNA targets for hsa-miR-658 from miranda.targets www.mirbase.org...
Null hsa-miR-532-3p View Gene Set 4.088e-06 1323 4.011e-05 69 microRNA targets for hsa-miR-532-3p from miranda.targets www.mirbase.org...
Null hsa-miR-346 View Gene Set 4.613e-06 1001 4.462e-05 70 microRNA targets for hsa-miR-346 from miranda.targets www.mirbase.org...
Null hsa-miR-650 View Gene Set 7.276e-06 1724 6.938e-05 71 microRNA targets for hsa-miR-650 from miranda.targets www.mirbase.org...
Null hsa-miR-631 View Gene Set 1.059e-05 745 9.953e-05 72 microRNA targets for hsa-miR-631 from miranda.targets www.mirbase.org...
Null hsa-miR-611 View Gene Set 1.238e-05 441 0.0001148 73 microRNA targets for hsa-miR-611 from miranda.targets www.mirbase.org...
Null hsa-miR-1204 View Gene Set 1.646e-05 619 0.0001505 74 microRNA targets for hsa-miR-1204 from miranda.targets www.mirbase.org...
Null hsa-miR-323-5p View Gene Set 2.146e-05 821 0.0001937 75 microRNA targets for hsa-miR-323-5p from miranda.targets www.mirbase.org...
Null hsa-miR-615-3p View Gene Set 2.787e-05 476 0.0002483 76 microRNA targets for hsa-miR-615-3p from miranda.targets www.mirbase.org...
Null hsa-miR-339-3p View Gene Set 3.664e-05 333 0.0003222 77 microRNA targets for hsa-miR-339-3p from miranda.targets www.mirbase.org...
Null hsa-miR-370 View Gene Set 3.78e-05 1528 0.0003259 78 microRNA targets for hsa-miR-370 from miranda.targets www.mirbase.org...
Null hsa-miR-502-5p View Gene Set 3.803e-05 1080 0.0003259 78 microRNA targets for hsa-miR-502-5p from miranda.targets www.mirbase.org...
Null hsa-miR-193a-5p View Gene Set 4.131e-05 1100 0.0003496 80 microRNA targets for hsa-miR-193a-5p from miranda.targets www.mirbase.org...
Null hsa-miR-1281 View Gene Set 4.296e-05 505 0.000359 81 microRNA targets for hsa-miR-1281 from miranda.targets www.mirbase.org...
Null hsa-miR-125a-5p View Gene Set 4.724e-05 1307 0.0003901 82 microRNA targets for hsa-miR-125a-5p from miranda.targets www.mirbase.org...
Null hsa-miR-342-5p View Gene Set 4.802e-05 861 0.0003917 83 microRNA targets for hsa-miR-342-5p from miranda.targets www.mirbase.org...
Null hsa-miR-769-3p View Gene Set 6.501e-05 1112 0.000524 84 microRNA targets for hsa-miR-769-3p from miranda.targets www.mirbase.org...
Null hsa-miR-1202 View Gene Set 0.0001014 1140 0.0008075 85 microRNA targets for hsa-miR-1202 from miranda.targets www.mirbase.org...
Null hsa-miR-1229 View Gene Set 0.0001183 1084 0.0009315 86 microRNA targets for hsa-miR-1229 from miranda.targets www.mirbase.org...
Null hsa-miR-492 View Gene Set 0.0001631 867 0.001269 87 microRNA targets for hsa-miR-492 from miranda.targets www.mirbase.org...
Null hsa-miR-1236 View Gene Set 0.0002498 2376 0.001922 88 microRNA targets for hsa-miR-1236 from miranda.targets www.mirbase.org...
Null hsa-miR-28-5p View Gene Set 0.0003553 1501 0.002703 89 microRNA targets for hsa-miR-28-5p from miranda.targets www.mirbase.org...
Null hsa-miR-483-5p View Gene Set 0.0004621 751 0.003476 90 microRNA targets for hsa-miR-483-5p from miranda.targets www.mirbase.org...
Null hsa-miR-596 View Gene Set 0.0005386 925 0.004007 91 microRNA targets for hsa-miR-596 from miranda.targets www.mirbase.org...
Null hsa-miR-1200 View Gene Set 0.0005661 1354 0.004166 92 microRNA targets for hsa-miR-1200 from miranda.targets www.mirbase.org...
Null hsa-miR-1226 View Gene Set 0.0006309 1119 0.004592 93 microRNA targets for hsa-miR-1226 from miranda.targets www.mirbase.org...
Null hsa-miR-647 View Gene Set 0.0006969 1254 0.005019 94 microRNA targets for hsa-miR-647 from miranda.targets www.mirbase.org...
Null hsa-miR-184 View Gene Set 0.0008143 471 0.005785 95 microRNA targets for hsa-miR-184 from miranda.targets www.mirbase.org...
Null hsa-miR-185 View Gene Set 0.0008203 2402 0.005785 95 microRNA targets for hsa-miR-185 from miranda.targets www.mirbase.org...
Null hsa-miR-1307 View Gene Set 0.0009288 255 0.006483 97 microRNA targets for hsa-miR-1307 from miranda.targets www.mirbase.org...
Null hsa-miR-1231 View Gene Set 0.0009835 1050 0.006794 98 microRNA targets for hsa-miR-1231 from miranda.targets www.mirbase.org...
Null hsa-miR-593 View Gene Set 0.00101 1337 0.006906 99 microRNA targets for hsa-miR-593 from miranda.targets www.mirbase.org...
Null hsa-miR-1205 View Gene Set 0.001431 1762 0.009688 100 microRNA targets for hsa-miR-1205 from miranda.targets www.mirbase.org...
Null hsa-miR-941 View Gene Set 0.001595 459 0.01069 101 microRNA targets for hsa-miR-941 from miranda.targets www.mirbase.org...
Null hsa-miR-34a View Gene Set 0.00162 1640 0.01075 102 microRNA targets for hsa-miR-34a from miranda.targets www.mirbase.org...
Null hsa-miR-1237 View Gene Set 0.001717 1455 0.01129 103 microRNA targets for hsa-miR-1237 from miranda.targets www.mirbase.org...
Null hsa-miR-720 View Gene Set 0.001911 342 0.01244 104 microRNA targets for hsa-miR-720 from miranda.targets www.mirbase.org...
Null hsa-miR-1289 View Gene Set 0.002078 1229 0.0134 105 microRNA targets for hsa-miR-1289 from miranda.targets www.mirbase.org...
Null hsa-miR-1295 View Gene Set 0.002372 247 0.01515 106 microRNA targets for hsa-miR-1295 from miranda.targets www.mirbase.org...
Null hsa-miR-886-3p View Gene Set 0.002446 377 0.01548 107 microRNA targets for hsa-miR-886-3p from miranda.targets www.mirbase.org...
Null hsa-miR-542-5p View Gene Set 0.00261 468 0.01636 108 microRNA targets for hsa-miR-542-5p from miranda.targets www.mirbase.org...
Null hsa-miR-1274a View Gene Set 0.002648 894 0.01644 109 microRNA targets for hsa-miR-1274a from miranda.targets www.mirbase.org...
Null hsa-miR-644 View Gene Set 0.002705 915 0.01665 110 microRNA targets for hsa-miR-644 from miranda.targets www.mirbase.org...
Null hsa-miR-602 View Gene Set 0.002824 652 0.01722 111 microRNA targets for hsa-miR-602 from miranda.targets www.mirbase.org...
Null hsa-miR-1286 View Gene Set 0.002951 1018 0.01784 112 microRNA targets for hsa-miR-1286 from miranda.targets www.mirbase.org...
Null hsa-miR-572 View Gene Set 0.003167 282 0.01898 113 microRNA targets for hsa-miR-572 from miranda.targets www.mirbase.org...
Null hsa-miR-566 View Gene Set 0.003451 340 0.0205 114 microRNA targets for hsa-miR-566 from miranda.targets www.mirbase.org...
Null hsa-miR-1227 View Gene Set 0.003954 710 0.02307 115 microRNA targets for hsa-miR-1227 from miranda.targets www.mirbase.org...
Null hsa-miR-1285 View Gene Set 0.00394 1694 0.02307 115 microRNA targets for hsa-miR-1285 from miranda.targets www.mirbase.org...
Null hsa-miR-564 View Gene Set 0.0041 456 0.02373 117 microRNA targets for hsa-miR-564 from miranda.targets www.mirbase.org...
Null hsa-miR-1825 View Gene Set 0.004214 814 0.02418 118 microRNA targets for hsa-miR-1825 from miranda.targets www.mirbase.org...
Null hsa-miR-937 View Gene Set 0.004705 225 0.02677 119 microRNA targets for hsa-miR-937 from miranda.targets www.mirbase.org...
Null hsa-miR-642 View Gene Set 0.005627 1484 0.03175 120 microRNA targets for hsa-miR-642 from miranda.targets www.mirbase.org...
Null hsa-miR-588 View Gene Set 0.006887 1100 0.03853 121 microRNA targets for hsa-miR-588 from miranda.targets www.mirbase.org...
Null hsa-miR-604 View Gene Set 0.007738 478 0.04294 122 microRNA targets for hsa-miR-604 from miranda.targets www.mirbase.org...
Null hsa-miR-1250 View Gene Set 0.008116 681 0.04467 123 microRNA targets for hsa-miR-1250 from miranda.targets www.mirbase.org...
Null hsa-miR-923 View Gene Set 0.008728 471 0.04765 124 microRNA targets for hsa-miR-923 from miranda.targets www.mirbase.org...

Gene Set Collection: mirbase.targets

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null hsa-miR-296-5p View Gene Set 2.256e-27 755 1.604e-24 1 microRNA targets for hsa-miR-296-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-615-5p View Gene Set 4.674e-26 848 1.662e-23 2 microRNA targets for hsa-miR-615-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-486-3p View Gene Set 1.76e-21 773 4.172e-19 3 microRNA targets for hsa-miR-486-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-663 View Gene Set 2.309e-19 743 3.284e-17 4 microRNA targets for hsa-miR-663 from mirbase.targets www.mirbase.org...
Null hsa-miR-939 View Gene Set 2.088e-19 667 3.284e-17 4 microRNA targets for hsa-miR-939 from mirbase.targets www.mirbase.org...
Null hsa-miR-331-3p View Gene Set 4.099e-19 712 4.857e-17 6 microRNA targets for hsa-miR-331-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-326 View Gene Set 8.025e-19 650 8.151e-17 7 microRNA targets for hsa-miR-326 from mirbase.targets www.mirbase.org...
Null hsa-miR-92b* View Gene Set 1.994e-18 648 1.772e-16 8 microRNA targets for hsa-miR-92b* from mirbase.targets www.mirbase.org...
Null hsa-miR-330-5p View Gene Set 3.451e-18 728 2.616e-16 9 microRNA targets for hsa-miR-330-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-608 View Gene Set 3.679e-18 729 2.616e-16 9 microRNA targets for hsa-miR-608 from mirbase.targets www.mirbase.org...
Null hsa-miR-296-3p View Gene Set 1.805e-17 905 1.166e-15 11 microRNA targets for hsa-miR-296-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-744 View Gene Set 1.568e-16 715 9.29e-15 12 microRNA targets for hsa-miR-744 from mirbase.targets www.mirbase.org...
Null hsa-miR-423-5p View Gene Set 3.626e-16 767 1.983e-14 13 microRNA targets for hsa-miR-423-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-339-5p View Gene Set 5.864e-16 659 2.978e-14 14 microRNA targets for hsa-miR-339-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-920 View Gene Set 1.181e-15 661 5.598e-14 15 microRNA targets for hsa-miR-920 from mirbase.targets www.mirbase.org...
Null hsa-miR-92a-2* View Gene Set 5.15e-15 654 2.288e-13 16 microRNA targets for hsa-miR-92a-2* from mirbase.targets www.mirbase.org...
Null hsa-miR-328 View Gene Set 7.357e-15 685 3.077e-13 17 microRNA targets for hsa-miR-328 from mirbase.targets www.mirbase.org...
Null hsa-miR-483-3p View Gene Set 4.595e-14 702 1.815e-12 18 microRNA targets for hsa-miR-483-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-760 View Gene Set 9.771e-14 690 3.656e-12 19 microRNA targets for hsa-miR-760 from mirbase.targets www.mirbase.org...
Null hsa-miR-125b View Gene Set 1.707e-13 831 5.78e-12 20 microRNA targets for hsa-miR-125b from mirbase.targets www.mirbase.org...
Null hsa-miR-339-3p View Gene Set 1.679e-13 797 5.78e-12 20 microRNA targets for hsa-miR-339-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-185* View Gene Set 1.827e-13 506 5.891e-12 22 microRNA targets for hsa-miR-185* from mirbase.targets www.mirbase.org...
Null hsa-miR-324-3p View Gene Set 1.989e-13 788 5.891e-12 22 microRNA targets for hsa-miR-324-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-637 View Gene Set 1.952e-13 672 5.891e-12 22 microRNA targets for hsa-miR-637 from mirbase.targets www.mirbase.org...
Null hsa-miR-886-5p View Gene Set 2.724e-13 793 7.746e-12 25 microRNA targets for hsa-miR-886-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-769-3p View Gene Set 5.753e-13 823 1.573e-11 26 microRNA targets for hsa-miR-769-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-504 View Gene Set 9.215e-13 621 2.427e-11 27 microRNA targets for hsa-miR-504 from mirbase.targets www.mirbase.org...
Null hsa-miR-324-5p View Gene Set 1.053e-12 801 2.673e-11 28 microRNA targets for hsa-miR-324-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-615-3p View Gene Set 1.68e-12 757 4.12e-11 29 microRNA targets for hsa-miR-615-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-342-5p View Gene Set 1.825e-12 698 4.326e-11 30 microRNA targets for hsa-miR-342-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-541 View Gene Set 2.402e-12 711 5.51e-11 31 microRNA targets for hsa-miR-541 from mirbase.targets www.mirbase.org...
Null hsa-miR-874 View Gene Set 3.897e-12 722 8.659e-11 32 microRNA targets for hsa-miR-874 from mirbase.targets www.mirbase.org...
Null hsa-miR-885-3p View Gene Set 4.022e-12 799 8.667e-11 33 microRNA targets for hsa-miR-885-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-149 View Gene Set 7.907e-12 602 1.654e-10 34 microRNA targets for hsa-miR-149 from mirbase.targets www.mirbase.org...
Null hsa-miR-125a-5p View Gene Set 8.741e-12 817 1.776e-10 35 microRNA targets for hsa-miR-125a-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-631 View Gene Set 9.095e-12 714 1.796e-10 36 microRNA targets for hsa-miR-631 from mirbase.targets www.mirbase.org...
Null hsa-miR-532-3p View Gene Set 1.246e-11 657 2.353e-10 37 microRNA targets for hsa-miR-532-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-623 View Gene Set 1.29e-11 693 2.353e-10 37 microRNA targets for hsa-miR-623 from mirbase.targets www.mirbase.org...
Null hsa-miR-671-5p View Gene Set 1.287e-11 813 2.353e-10 37 microRNA targets for hsa-miR-671-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-484 View Gene Set 1.416e-11 733 2.516e-10 40 microRNA targets for hsa-miR-484 from mirbase.targets www.mirbase.org...
Null hsa-miR-675 View Gene Set 1.842e-11 686 3.195e-10 41 microRNA targets for hsa-miR-675 from mirbase.targets www.mirbase.org...
Null hsa-miR-638 View Gene Set 2.726e-11 639 4.508e-10 42 microRNA targets for hsa-miR-638 from mirbase.targets www.mirbase.org...
Null hsa-miR-940 View Gene Set 2.692e-11 660 4.508e-10 42 microRNA targets for hsa-miR-940 from mirbase.targets www.mirbase.org...
Null hsa-miR-24 View Gene Set 2.925e-11 739 4.726e-10 44 microRNA targets for hsa-miR-24 from mirbase.targets www.mirbase.org...
Null hsa-miR-658 View Gene Set 6.998e-11 660 1.106e-09 45 microRNA targets for hsa-miR-658 from mirbase.targets www.mirbase.org...
Null hsa-miR-214 View Gene Set 8.292e-11 797 1.282e-09 46 microRNA targets for hsa-miR-214 from mirbase.targets www.mirbase.org...
Null hsa-miR-661 View Gene Set 1.562e-10 575 2.363e-09 47 microRNA targets for hsa-miR-661 from mirbase.targets www.mirbase.org...
Null hsa-miR-665 View Gene Set 1.646e-10 617 2.439e-09 48 microRNA targets for hsa-miR-665 from mirbase.targets www.mirbase.org...
Null hsa-miR-149* View Gene Set 1.761e-10 459 2.556e-09 49 microRNA targets for hsa-miR-149* from mirbase.targets www.mirbase.org...
Null hsa-miR-220c View Gene Set 1.81e-10 831 2.574e-09 50 microRNA targets for hsa-miR-220c from mirbase.targets www.mirbase.org...
Null hsa-miR-654-5p View Gene Set 2.503e-10 718 3.489e-09 51 microRNA targets for hsa-miR-654-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-23a* View Gene Set 2.79e-10 604 3.802e-09 52 microRNA targets for hsa-miR-23a* from mirbase.targets www.mirbase.org...
Null hsa-miR-769-5p View Gene Set 2.834e-10 790 3.802e-09 52 microRNA targets for hsa-miR-769-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-361-3p View Gene Set 2.937e-10 634 3.867e-09 54 microRNA targets for hsa-miR-361-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-125a-3p View Gene Set 3.694e-10 829 4.718e-09 55 microRNA targets for hsa-miR-125a-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-193a-5p View Gene Set 3.716e-10 767 4.718e-09 55 microRNA targets for hsa-miR-193a-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-146b-3p View Gene Set 3.948e-10 695 4.925e-09 57 microRNA targets for hsa-miR-146b-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-564 View Gene Set 4.252e-10 706 5.213e-09 58 microRNA targets for hsa-miR-564 from mirbase.targets www.mirbase.org...
Null hsa-miR-647 View Gene Set 8.23e-10 724 9.917e-09 59 microRNA targets for hsa-miR-647 from mirbase.targets www.mirbase.org...
Null hsa-miR-323-5p View Gene Set 1.749e-09 763 2.073e-08 60 microRNA targets for hsa-miR-323-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-612 View Gene Set 2.057e-09 685 2.398e-08 61 microRNA targets for hsa-miR-612 from mirbase.targets www.mirbase.org...
Null hsa-miR-572 View Gene Set 2.519e-09 602 2.888e-08 62 microRNA targets for hsa-miR-572 from mirbase.targets www.mirbase.org...
Null hsa-miR-505* View Gene Set 2.711e-09 516 3.06e-08 63 microRNA targets for hsa-miR-505* from mirbase.targets www.mirbase.org...
Null hsa-miR-602 View Gene Set 2.947e-09 710 3.274e-08 64 microRNA targets for hsa-miR-602 from mirbase.targets www.mirbase.org...
Null hsa-miR-423-3p View Gene Set 4.07e-09 741 4.429e-08 65 microRNA targets for hsa-miR-423-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-671-3p View Gene Set 4.111e-09 767 4.429e-08 65 microRNA targets for hsa-miR-671-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-766 View Gene Set 4.78e-09 517 5.04e-08 67 microRNA targets for hsa-miR-766 from mirbase.targets www.mirbase.org...
Null hsa-miR-92a-1* View Gene Set 4.82e-09 661 5.04e-08 67 microRNA targets for hsa-miR-92a-1* from mirbase.targets www.mirbase.org...
Null hsa-miR-596 View Gene Set 5.154e-09 644 5.274e-08 69 microRNA targets for hsa-miR-596 from mirbase.targets www.mirbase.org...
Null hsa-miR-877* View Gene Set 5.192e-09 479 5.274e-08 69 microRNA targets for hsa-miR-877* from mirbase.targets www.mirbase.org...
Null hsa-miR-370 View Gene Set 9.08e-09 710 9.093e-08 71 microRNA targets for hsa-miR-370 from mirbase.targets www.mirbase.org...
Null hsa-miR-937 View Gene Set 1.049e-08 654 1.036e-07 72 microRNA targets for hsa-miR-937 from mirbase.targets www.mirbase.org...
Null hsa-miR-765 View Gene Set 1.148e-08 674 1.118e-07 73 microRNA targets for hsa-miR-765 from mirbase.targets www.mirbase.org...
Null hsa-miR-483-5p View Gene Set 1.344e-08 717 1.292e-07 74 microRNA targets for hsa-miR-483-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-18a* View Gene Set 1.867e-08 491 1.77e-07 75 microRNA targets for hsa-miR-18a* from mirbase.targets www.mirbase.org...
Null hsa-miR-30b* View Gene Set 3.589e-08 655 3.358e-07 76 microRNA targets for hsa-miR-30b* from mirbase.targets www.mirbase.org...
Null hsa-miR-151-5p View Gene Set 5.879e-08 749 5.429e-07 77 microRNA targets for hsa-miR-151-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-133b View Gene Set 7.09e-08 770 6.462e-07 78 microRNA targets for hsa-miR-133b from mirbase.targets www.mirbase.org...
Null hsa-miR-432* View Gene Set 7.445e-08 544 6.7e-07 79 microRNA targets for hsa-miR-432* from mirbase.targets www.mirbase.org...
Null hsa-miR-565 View Gene Set 7.728e-08 689 6.868e-07 80 microRNA targets for hsa-miR-565 from mirbase.targets www.mirbase.org...
Null hsa-miR-492 View Gene Set 1.084e-07 625 9.514e-07 81 microRNA targets for hsa-miR-492 from mirbase.targets www.mirbase.org...
Null hsa-miR-345 View Gene Set 1.097e-07 696 9.516e-07 82 microRNA targets for hsa-miR-345 from mirbase.targets www.mirbase.org...
Null hsa-miR-668 View Gene Set 1.404e-07 560 1.202e-06 83 microRNA targets for hsa-miR-668 from mirbase.targets www.mirbase.org...
Null hsa-miR-642 View Gene Set 1.485e-07 609 1.257e-06 84 microRNA targets for hsa-miR-642 from mirbase.targets www.mirbase.org...
Null hsa-miR-194* View Gene Set 3.073e-07 502 2.57e-06 85 microRNA targets for hsa-miR-194* from mirbase.targets www.mirbase.org...
Null hsa-miR-422a View Gene Set 3.502e-07 755 2.895e-06 86 microRNA targets for hsa-miR-422a from mirbase.targets www.mirbase.org...
Null hsa-miR-25* View Gene Set 4.219e-07 418 3.448e-06 87 microRNA targets for hsa-miR-25* from mirbase.targets www.mirbase.org...
Null hsa-miR-611 View Gene Set 4.3e-07 671 3.474e-06 88 microRNA targets for hsa-miR-611 from mirbase.targets www.mirbase.org...
Null hsa-miR-542-5p View Gene Set 4.508e-07 774 3.601e-06 89 microRNA targets for hsa-miR-542-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-554 View Gene Set 6.122e-07 708 4.836e-06 90 microRNA targets for hsa-miR-554 from mirbase.targets www.mirbase.org...
Null hsa-miR-639 View Gene Set 7.583e-07 561 5.925e-06 91 microRNA targets for hsa-miR-639 from mirbase.targets www.mirbase.org...
Null hsa-miR-204 View Gene Set 8.513e-07 640 6.579e-06 92 microRNA targets for hsa-miR-204 from mirbase.targets www.mirbase.org...
Null hsa-miR-491-5p View Gene Set 1.14e-06 731 8.715e-06 93 microRNA targets for hsa-miR-491-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-133a View Gene Set 1.36e-06 763 1.028e-05 94 microRNA targets for hsa-miR-133a from mirbase.targets www.mirbase.org...
Null hsa-miR-662 View Gene Set 1.382e-06 663 1.034e-05 95 microRNA targets for hsa-miR-662 from mirbase.targets www.mirbase.org...
Null hsa-miR-525-3p View Gene Set 1.669e-06 790 1.236e-05 96 microRNA targets for hsa-miR-525-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-551a View Gene Set 1.791e-06 676 1.313e-05 97 microRNA targets for hsa-miR-551a from mirbase.targets www.mirbase.org...
Null hsa-miR-622 View Gene Set 2.096e-06 635 1.521e-05 98 microRNA targets for hsa-miR-622 from mirbase.targets www.mirbase.org...
Null hsa-miR-23b* View Gene Set 2.22e-06 544 1.594e-05 99 microRNA targets for hsa-miR-23b* from mirbase.targets www.mirbase.org...
Null hsa-miR-30c-1* View Gene Set 2.723e-06 741 1.936e-05 100 microRNA targets for hsa-miR-30c-1* from mirbase.targets www.mirbase.org...
Null hsa-miR-886-3p View Gene Set 2.836e-06 745 1.997e-05 101 microRNA targets for hsa-miR-886-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-657 View Gene Set 3.211e-06 718 2.238e-05 102 microRNA targets for hsa-miR-657 from mirbase.targets www.mirbase.org...
Null hsa-miR-674 View Gene Set 3.261e-06 788 2.251e-05 103 microRNA targets for hsa-miR-674 from mirbase.targets www.mirbase.org...
Null hsa-miR-135a* View Gene Set 3.847e-06 615 2.63e-05 104 microRNA targets for hsa-miR-135a* from mirbase.targets www.mirbase.org...
Null hsa-miR-650 View Gene Set 4.098e-06 693 2.775e-05 105 microRNA targets for hsa-miR-650 from mirbase.targets www.mirbase.org...
Null hsa-miR-193b* View Gene Set 4.166e-06 586 2.794e-05 106 microRNA targets for hsa-miR-193b* from mirbase.targets www.mirbase.org...
Null hsa-miR-604 View Gene Set 4.4e-06 691 2.923e-05 107 microRNA targets for hsa-miR-604 from mirbase.targets www.mirbase.org...
Null hsa-miR-609 View Gene Set 5.476e-06 687 3.605e-05 108 microRNA targets for hsa-miR-609 from mirbase.targets www.mirbase.org...
Null hsa-miR-892b View Gene Set 6.678e-06 726 4.356e-05 109 microRNA targets for hsa-miR-892b from mirbase.targets www.mirbase.org...
Null hsa-miR-941 View Gene Set 8.29e-06 590 5.358e-05 110 microRNA targets for hsa-miR-941 from mirbase.targets www.mirbase.org...
Null hsa-miR-218-1* View Gene Set 9.584e-06 528 6.099e-05 111 microRNA targets for hsa-miR-218-1* from mirbase.targets www.mirbase.org...
Null hsa-miR-432 View Gene Set 9.607e-06 691 6.099e-05 111 microRNA targets for hsa-miR-432 from mirbase.targets www.mirbase.org...
Null hsa-miR-490-5p View Gene Set 1.002e-05 702 6.305e-05 113 microRNA targets for hsa-miR-490-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-412 View Gene Set 1.221e-05 627 7.615e-05 114 microRNA targets for hsa-miR-412 from mirbase.targets www.mirbase.org...
Null hsa-miR-601 View Gene Set 1.345e-05 699 8.315e-05 115 microRNA targets for hsa-miR-601 from mirbase.targets www.mirbase.org...
Null hsa-miR-877 View Gene Set 2.071e-05 668 0.0001269 116 microRNA targets for hsa-miR-877 from mirbase.targets www.mirbase.org...
Null hsa-miR-33b* View Gene Set 2.42e-05 577 0.0001471 117 microRNA targets for hsa-miR-33b* from mirbase.targets www.mirbase.org...
Null hsa-miR-645 View Gene Set 2.904e-05 569 0.000175 118 microRNA targets for hsa-miR-645 from mirbase.targets www.mirbase.org...
Null hsa-miR-184 View Gene Set 3.168e-05 713 0.0001893 119 microRNA targets for hsa-miR-184 from mirbase.targets www.mirbase.org...
Null hsa-miR-512-5p View Gene Set 3.848e-05 693 0.0002258 120 microRNA targets for hsa-miR-512-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-571 View Gene Set 3.825e-05 720 0.0002258 120 microRNA targets for hsa-miR-571 from mirbase.targets www.mirbase.org...
Null hsa-miR-593 View Gene Set 3.874e-05 556 0.0002258 120 microRNA targets for hsa-miR-593 from mirbase.targets www.mirbase.org...
Null hsa-miR-221* View Gene Set 4.017e-05 525 0.0002322 123 microRNA targets for hsa-miR-221* from mirbase.targets www.mirbase.org...
Null hsa-miR-502-5p View Gene Set 4.345e-05 730 0.0002491 124 microRNA targets for hsa-miR-502-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-551b View Gene Set 4.614e-05 665 0.0002624 125 microRNA targets for hsa-miR-551b from mirbase.targets www.mirbase.org...
Null hsa-miR-560 View Gene Set 5.156e-05 730 0.0002909 126 microRNA targets for hsa-miR-560 from mirbase.targets www.mirbase.org...
Null hsa-miR-593* View Gene Set 5.51e-05 504 0.0003085 127 microRNA targets for hsa-miR-593* from mirbase.targets www.mirbase.org...
Null hsa-miR-138 View Gene Set 5.665e-05 730 0.0003146 128 microRNA targets for hsa-miR-138 from mirbase.targets www.mirbase.org...
Null hsa-miR-198 View Gene Set 5.907e-05 783 0.0003255 129 microRNA targets for hsa-miR-198 from mirbase.targets www.mirbase.org...
Null hsa-miR-524-3p View Gene Set 6.476e-05 791 0.0003542 130 microRNA targets for hsa-miR-524-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-525-5p View Gene Set 6.76e-05 784 0.0003669 131 microRNA targets for hsa-miR-525-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-933 View Gene Set 7.762e-05 618 0.0004181 132 microRNA targets for hsa-miR-933 from mirbase.targets www.mirbase.org...
Null hsa-miR-188-5p View Gene Set 8.287e-05 732 0.000443 133 microRNA targets for hsa-miR-188-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-485-5p View Gene Set 9.452e-05 556 0.0005015 134 microRNA targets for hsa-miR-485-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-30c-2* View Gene Set 0.0001027 758 0.0005409 135 microRNA targets for hsa-miR-30c-2* from mirbase.targets www.mirbase.org...
Null hsa-miR-93* View Gene Set 0.0001095 622 0.0005727 136 microRNA targets for hsa-miR-93* from mirbase.targets www.mirbase.org...
Null hsa-miR-644 View Gene Set 0.0001157 692 0.0006007 137 microRNA targets for hsa-miR-644 from mirbase.targets www.mirbase.org...
Null hsa-miR-923 View Gene Set 0.000143 690 0.0007369 138 microRNA targets for hsa-miR-923 from mirbase.targets www.mirbase.org...
Null hsa-miR-211 View Gene Set 0.0001441 554 0.000737 139 microRNA targets for hsa-miR-211 from mirbase.targets www.mirbase.org...
Null hsa-miR-210 View Gene Set 0.0001527 703 0.0007757 140 microRNA targets for hsa-miR-210 from mirbase.targets www.mirbase.org...
Null hsa-miR-298 View Gene Set 0.000169 716 0.000852 141 microRNA targets for hsa-miR-298 from mirbase.targets www.mirbase.org...
Null hsa-miR-672 View Gene Set 0.0001908 608 0.0009556 142 microRNA targets for hsa-miR-672 from mirbase.targets www.mirbase.org...
Null hsa-miR-27a* View Gene Set 0.0002004 616 0.0009963 143 microRNA targets for hsa-miR-27a* from mirbase.targets www.mirbase.org...
Null hsa-miR-625 View Gene Set 0.0002096 650 0.001035 144 microRNA targets for hsa-miR-625 from mirbase.targets www.mirbase.org...
Null hsa-miR-767-3p View Gene Set 0.000213 784 0.001045 145 microRNA targets for hsa-miR-767-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-132* View Gene Set 0.0002305 481 0.001116 146 microRNA targets for hsa-miR-132* from mirbase.targets www.mirbase.org...
Null hsa-miR-191* View Gene Set 0.0002307 462 0.001116 146 microRNA targets for hsa-miR-191* from mirbase.targets www.mirbase.org...
Null hsa-miR-205 View Gene Set 0.0002602 687 0.00125 148 microRNA targets for hsa-miR-205 from mirbase.targets www.mirbase.org...
Null hsa-miR-127-3p View Gene Set 0.0002959 653 0.001412 149 microRNA targets for hsa-miR-127-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-28-5p View Gene Set 0.0002988 780 0.001413 150 microRNA targets for hsa-miR-28-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-632 View Gene Set 0.0003 690 0.001413 150 microRNA targets for hsa-miR-632 from mirbase.targets www.mirbase.org...
Null hsa-miR-346 View Gene Set 0.0004016 568 0.001879 152 microRNA targets for hsa-miR-346 from mirbase.targets www.mirbase.org...
Null hsa-miR-139-3p View Gene Set 0.0004282 736 0.001977 153 microRNA targets for hsa-miR-139-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-450b-3p View Gene Set 0.0004259 738 0.001977 153 microRNA targets for hsa-miR-450b-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-125b-1* View Gene Set 0.000434 622 0.001991 155 microRNA targets for hsa-miR-125b-1* from mirbase.targets www.mirbase.org...
Null hsa-miR-508-5p View Gene Set 0.000521 572 0.002375 156 microRNA targets for hsa-miR-508-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-214* View Gene Set 0.0005644 434 0.002556 157 microRNA targets for hsa-miR-214* from mirbase.targets www.mirbase.org...
Null hsa-miR-887 View Gene Set 0.0006047 709 0.002721 158 microRNA targets for hsa-miR-887 from mirbase.targets www.mirbase.org...
Null hsa-miR-634 View Gene Set 0.0006912 714 0.003091 159 microRNA targets for hsa-miR-634 from mirbase.targets www.mirbase.org...
Null hsa-miR-646 View Gene Set 0.001006 745 0.004471 160 microRNA targets for hsa-miR-646 from mirbase.targets www.mirbase.org...
Null hsa-miR-10b View Gene Set 0.001026 693 0.004532 161 microRNA targets for hsa-miR-10b from mirbase.targets www.mirbase.org...
Null hsa-miR-503 View Gene Set 0.001047 748 0.004593 162 microRNA targets for hsa-miR-503 from mirbase.targets www.mirbase.org...
Null hsa-miR-588 View Gene Set 0.00112 660 0.004886 163 microRNA targets for hsa-miR-588 from mirbase.targets www.mirbase.org...
Null hsa-miR-129* View Gene Set 0.001138 504 0.004934 164 microRNA targets for hsa-miR-129* from mirbase.targets www.mirbase.org...
Null hsa-miR-768-5p View Gene Set 0.001166 763 0.005023 165 microRNA targets for hsa-miR-768-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-34a View Gene Set 0.001326 917 0.005681 166 microRNA targets for hsa-miR-34a from mirbase.targets www.mirbase.org...
Null hsa-miR-744* View Gene Set 0.001349 472 0.005742 167 microRNA targets for hsa-miR-744* from mirbase.targets www.mirbase.org...
Null hsa-miR-431 View Gene Set 0.001418 638 0.006002 168 microRNA targets for hsa-miR-431 from mirbase.targets www.mirbase.org...
Null hsa-miR-129-3p View Gene Set 0.001687 712 0.007096 169 microRNA targets for hsa-miR-129-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-619 View Gene Set 0.001787 674 0.007473 170 microRNA targets for hsa-miR-619 from mirbase.targets www.mirbase.org...
Null hsa-miR-516a-3p View Gene Set 0.001818 780 0.007559 171 microRNA targets for hsa-miR-516a-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-15a* View Gene Set 0.002115 554 0.008691 172 microRNA targets for hsa-miR-15a* from mirbase.targets www.mirbase.org...
Null hsa-miR-26b* View Gene Set 0.002107 555 0.008691 172 microRNA targets for hsa-miR-26b* from mirbase.targets www.mirbase.org...
Null hsa-miR-193b View Gene Set 0.002334 716 0.009483 174 microRNA targets for hsa-miR-193b from mirbase.targets www.mirbase.org...
Null hsa-miR-431* View Gene Set 0.002328 547 0.009483 174 microRNA targets for hsa-miR-431* from mirbase.targets www.mirbase.org...
Null hsa-miR-197 View Gene Set 0.002421 609 0.009779 176 microRNA targets for hsa-miR-197 from mirbase.targets www.mirbase.org...
Null hsa-miR-942 View Gene Set 0.002519 583 0.01012 177 microRNA targets for hsa-miR-942 from mirbase.targets www.mirbase.org...
Null hsa-miR-34c-5p View Gene Set 0.002551 879 0.01019 178 microRNA targets for hsa-miR-34c-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-10a View Gene Set 0.002607 709 0.01036 179 microRNA targets for hsa-miR-10a from mirbase.targets www.mirbase.org...
Null hsa-miR-515-3p View Gene Set 0.002797 809 0.01105 180 microRNA targets for hsa-miR-515-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-454* View Gene Set 0.002978 429 0.0117 181 microRNA targets for hsa-miR-454* from mirbase.targets www.mirbase.org...
Null hsa-miR-17* View Gene Set 0.003469 569 0.01355 182 microRNA targets for hsa-miR-17* from mirbase.targets www.mirbase.org...
Null hsa-miR-497 View Gene Set 0.003761 805 0.01461 183 microRNA targets for hsa-miR-497 from mirbase.targets www.mirbase.org...
Null hsa-miR-378 View Gene Set 0.003809 720 0.01472 184 microRNA targets for hsa-miR-378 from mirbase.targets www.mirbase.org...
Null hsa-miR-106b* View Gene Set 0.004195 562 0.01612 185 microRNA targets for hsa-miR-106b* from mirbase.targets www.mirbase.org...
Null hsa-miR-128a View Gene Set 0.004341 811 0.01659 186 microRNA targets for hsa-miR-128a from mirbase.targets www.mirbase.org...
Null hsa-miR-150 View Gene Set 0.004589 595 0.01745 187 microRNA targets for hsa-miR-150 from mirbase.targets www.mirbase.org...
Null hsa-miR-575 View Gene Set 0.004638 738 0.01754 188 microRNA targets for hsa-miR-575 from mirbase.targets www.mirbase.org...
Null hsa-miR-518e* View Gene Set 0.004954 584 0.01864 189 microRNA targets for hsa-miR-518e* from mirbase.targets www.mirbase.org...
Null hsa-miR-516b View Gene Set 0.005003 845 0.01872 190 microRNA targets for hsa-miR-516b from mirbase.targets www.mirbase.org...
Null hsa-miR-99b* View Gene Set 0.005035 571 0.01874 191 microRNA targets for hsa-miR-99b* from mirbase.targets www.mirbase.org...
Null hsa-miR-574-5p View Gene Set 0.005253 834 0.01945 192 microRNA targets for hsa-miR-574-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-635 View Gene Set 0.005279 648 0.01945 192 microRNA targets for hsa-miR-635 from mirbase.targets www.mirbase.org...
Null hsa-miR-550 View Gene Set 0.005915 669 0.02168 194 microRNA targets for hsa-miR-550 from mirbase.targets www.mirbase.org...
Null hsa-miR-188-3p View Gene Set 0.006301 637 0.02297 195 microRNA targets for hsa-miR-188-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-18b* View Gene Set 0.007075 565 0.02566 196 microRNA targets for hsa-miR-18b* from mirbase.targets www.mirbase.org...
Null hsa-miR-518c* View Gene Set 0.007548 606 0.0271 197 microRNA targets for hsa-miR-518c* from mirbase.targets www.mirbase.org...
Null hsa-miR-659 View Gene Set 0.007545 705 0.0271 197 microRNA targets for hsa-miR-659 from mirbase.targets www.mirbase.org...
Null hsa-miR-629* View Gene Set 0.008663 382 0.03095 199 microRNA targets for hsa-miR-629* from mirbase.targets www.mirbase.org...
Null hsa-miR-520a-5p View Gene Set 0.009551 933 0.03395 200 microRNA targets for hsa-miR-520a-5p from mirbase.targets www.mirbase.org...

Gene Set Collection: mirtarget2.targets

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null hsa-miR-608 View Gene Set 5.823e-10 308 3.22e-07 1 microRNA targets for hsa-miR-608 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-765 View Gene Set 1.1e-06 305 0.0003042 2 microRNA targets for hsa-miR-765 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-637 View Gene Set 6.007e-06 260 0.0009176 3 microRNA targets for hsa-miR-637 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-661 View Gene Set 6.637e-06 223 0.0009176 3 microRNA targets for hsa-miR-661 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-486-3p View Gene Set 3.611e-05 191 0.003329 5 microRNA targets for hsa-miR-486-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-663 View Gene Set 3.181e-05 53 0.003329 5 microRNA targets for hsa-miR-663 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-665 View Gene Set 8.729e-05 342 0.006896 7 microRNA targets for hsa-miR-665 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-423-5p View Gene Set 0.0001374 138 0.0095 8 microRNA targets for hsa-miR-423-5p from mirtarget2.targets www.mirbase.org...

Gene Set Collection: pictar.targets

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null hsa-miR-331 View Gene Set 4.625e-10 194 8.232e-08 1 microRNA targets for hsa-miR-331 from pictar.targets www.mirbase.org...
Null hsa-miR-328 View Gene Set 1.506e-08 204 1.341e-06 2 microRNA targets for hsa-miR-328 from pictar.targets www.mirbase.org...
Null hsa-miR-326 View Gene Set 5.477e-07 265 3.25e-05 3 microRNA targets for hsa-miR-326 from pictar.targets www.mirbase.org...
Null hsa-miR-185 View Gene Set 0.0002443 266 0.01087 4 microRNA targets for hsa-miR-185 from pictar.targets www.mirbase.org...

Gene Set Collection: targetscan.targets

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null hsa-miR-326 View Gene Set 2.202e-08 275 2.687e-06 1 microRNA targets for hsa-miR-326 from targetscan.targets www.mirbase.org...
Null hsa-miR-330-5p View Gene Set 2.202e-08 275 2.687e-06 1 microRNA targets for hsa-miR-330-5p from targetscan.targets www.mirbase.org...
Null hsa-miR-214 View Gene Set 0.0005129 409 0.04172 3 microRNA targets for hsa-miR-214 from targetscan.targets www.mirbase.org...
Null hsa-miR-485-5p View Gene Set 0.0007907 198 0.04823 4 microRNA targets for hsa-miR-485-5p from targetscan.targets www.mirbase.org...

Gene Set Collection: miRNAtargetUnion

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-296-5p View Gene Set 5.312e-44 1519 1.229e-40 1 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-296-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-608 View Gene Set 3.764e-43 3384 4.355e-40 2 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-608 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-486-3p View Gene Set 1.757e-42 2545 1.355e-39 3 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-486-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-423-5p View Gene Set 7.878e-42 2496 3.646e-39 4 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-423-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-939 View Gene Set 6.351e-42 2729 3.646e-39 4 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-939 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-615-5p View Gene Set 2.378e-37 1865 9.172e-35 6 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-615-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-331-3p View Gene Set 4.979e-36 1764 1.44e-33 7 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-331-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-661 View Gene Set 4.39e-36 2615 1.44e-33 7 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-661 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-663 View Gene Set 7.666e-34 1582 1.971e-31 9 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-663 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-637 View Gene Set 1.036e-32 2846 2.396e-30 10 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-637 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-744 View Gene Set 2.012e-30 1378 4.233e-28 11 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-744 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-326 View Gene Set 2.392e-29 2156 4.613e-27 12 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-326 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-665 View Gene Set 2.506e-28 2514 4.461e-26 13 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-665 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-326 View Gene Set 8.133e-28 2171 1.344e-25 14 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-326 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-330-5p View Gene Set 8.893e-28 2574 1.372e-25 15 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-330-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-326 View Gene Set 2.468e-27 2147 3.57e-25 16 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-326 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-328 View Gene Set 1.182e-26 1892 1.609e-24 17 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-328 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-330-5p View Gene Set 1.925e-25 2597 2.344e-23 18 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-330-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-541 View Gene Set 1.828e-25 1832 2.344e-23 18 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-541 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-324-3p View Gene Set 6.571e-25 1946 7.521e-23 20 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-324-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-654-5p View Gene Set 7.151e-25 1681 7.521e-23 20 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-654-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-328 View Gene Set 7.013e-25 1838 7.521e-23 20 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-328 from miRNAtargetUnion www.mirbase.org...
Null mirbase.pictar.targetscan.targetsUnion.hsa-miR-326 View Gene Set 1.204e-24 1071 1.211e-22 23 microRNA targets for mirbase.pictar.targetscan.targetsUnion.hsa-miR-326 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-328 View Gene Set 4.602e-24 1858 4.437e-22 24 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-328 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-760 View Gene Set 1.185e-23 2252 1.084e-21 25 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-760 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-940 View Gene Set 1.218e-23 2504 1.084e-21 25 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-940 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-326 View Gene Set 2.571e-23 1065 2.204e-21 27 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-326 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-296-3p View Gene Set 2.797e-22 2354 2.312e-20 28 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-296-3p from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-326 View Gene Set 1.362e-21 1066 1.087e-19 29 microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-326 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-324-3p View Gene Set 1.762e-21 1941 1.359e-19 30 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-324-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-296-3p View Gene Set 7.418e-21 2397 5.537e-19 31 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-296-3p from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-330-5p View Gene Set 1.683e-20 1142 1.217e-18 32 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-330-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-339-5p View Gene Set 1.193e-19 1899 8.282e-18 33 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-339-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.pictar.targetscan.targetsUnion.hsa-miR-326 View Gene Set 1.217e-19 1813 8.282e-18 33 microRNA targets for miranda.pictar.targetscan.targetsUnion.hsa-miR-326 from miRNAtargetUnion www.mirbase.org...
Null mirbase.pictar.targetscan.targetsUnion.hsa-miR-328 View Gene Set 1.472e-19 916 9.732e-18 35 microRNA targets for mirbase.pictar.targetscan.targetsUnion.hsa-miR-328 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-326 View Gene Set 2.802e-19 1789 1.801e-17 36 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-326 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-874 View Gene Set 3.72e-19 1840 2.327e-17 37 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-874 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-326 View Gene Set 5.698e-19 1819 3.47e-17 38 microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-326 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-765 View Gene Set 6.01e-19 3105 3.566e-17 39 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-765 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-920 View Gene Set 1.631e-18 1935 9.434e-17 40 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-920 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-149 View Gene Set 2.881e-18 2203 1.626e-16 41 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-149 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-330-5p View Gene Set 1.082e-17 2177 5.959e-16 42 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-330-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-149 View Gene Set 1.339e-17 2201 7.204e-16 43 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-149 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-874 View Gene Set 1.436e-17 1806 7.555e-16 44 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-874 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-339-5p View Gene Set 1.639e-17 1790 8.426e-16 45 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-339-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-612 View Gene Set 2.403e-17 2970 1.209e-15 46 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-612 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-149 View Gene Set 5.903e-17 2200 2.857e-15 47 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-149 from miRNAtargetUnion www.mirbase.org...
Null miranda.pictar.targetscan.targetsUnion.hsa-miR-328 View Gene Set 5.927e-17 1435 2.857e-15 47 microRNA targets for miranda.pictar.targetscan.targetsUnion.hsa-miR-328 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-886-5p View Gene Set 6.976e-17 1187 3.294e-15 49 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-886-5p from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-328 View Gene Set 8.468e-17 946 3.919e-15 50 microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-328 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-24 View Gene Set 1.283e-16 2258 5.821e-15 51 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-24 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-671-5p View Gene Set 1.522e-16 2249 6.774e-15 52 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-671-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-885-3p View Gene Set 5.49e-16 1618 2.397e-14 53 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-885-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-328 View Gene Set 6.259e-16 1458 2.682e-14 54 microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-328 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-361-3p View Gene Set 7.833e-16 2123 3.296e-14 55 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-361-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-24 View Gene Set 8.189e-16 2189 3.325e-14 56 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-24 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-484 View Gene Set 8.12e-16 1853 3.325e-14 56 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-484 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-125b View Gene Set 9.258e-16 1849 3.693e-14 58 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-125b from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.tarbase.targetsUnion.hsa-miR-24 View Gene Set 2.001e-15 2089 7.848e-14 59 microRNA targets for miranda.mirbase.tarbase.targetsUnion.hsa-miR-24 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-675 View Gene Set 5.446e-15 1108 2.101e-13 60 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-675 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-339-3p View Gene Set 5.945e-15 1044 2.255e-13 61 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-339-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-24 View Gene Set 6.643e-15 2222 2.479e-13 62 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-24 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-125b View Gene Set 1.034e-14 2046 3.799e-13 63 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-125b from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-296-3p View Gene Set 1.502e-14 1042 5.432e-13 64 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-296-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-328 View Gene Set 2.525e-14 1394 8.988e-13 65 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-328 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-125b View Gene Set 2.721e-14 1969 9.539e-13 66 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-125b from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-491-5p View Gene Set 2.765e-14 1937 9.551e-13 67 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-491-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-615-3p View Gene Set 3.513e-14 1113 1.156e-12 68 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-615-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-766 View Gene Set 3.548e-14 2106 1.156e-12 68 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-766 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-214 View Gene Set 3.468e-14 2832 1.156e-12 68 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-214 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-615-3p View Gene Set 3.409e-14 1112 1.156e-12 68 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-615-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-491-5p View Gene Set 4.51e-14 1882 1.449e-12 72 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-491-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-532-3p View Gene Set 6.476e-14 1959 2.053e-12 73 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-532-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-323-5p View Gene Set 1.217e-13 1485 3.804e-12 74 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-323-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-638 View Gene Set 1.277e-13 1054 3.941e-12 75 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-638 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-324-3p View Gene Set 1.401e-13 1505 4.265e-12 76 microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-324-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-485-5p View Gene Set 1.947e-13 2302 5.85e-12 77 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-485-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-658 View Gene Set 2.222e-13 1603 6.593e-12 78 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-658 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-485-5p View Gene Set 2.399e-13 2231 7.028e-12 79 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-485-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-504 View Gene Set 3.101e-13 1464 8.969e-12 80 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-504 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-328 View Gene Set 3.493e-13 872 9.978e-12 81 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-328 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-504 View Gene Set 5.102e-13 1489 1.44e-11 82 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-504 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-214 View Gene Set 5.188e-13 2823 1.446e-11 83 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-214 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-151-5p View Gene Set 7.271e-13 1244 2.003e-11 84 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-151-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-149 View Gene Set 1.713e-12 1882 4.662e-11 85 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-149 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-615-3p View Gene Set 2.43e-12 764 6.538e-11 86 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-615-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-324-5p View Gene Set 2.928e-12 1488 7.787e-11 87 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-324-5p from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-149 View Gene Set 3.501e-12 975 9.207e-11 88 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-149 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-324-5p View Gene Set 4.153e-12 1516 1.08e-10 89 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-324-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-149 View Gene Set 6.104e-12 1883 1.57e-10 90 microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-149 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-631 View Gene Set 6.293e-12 1374 1.6e-10 91 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-631 from miRNAtargetUnion www.mirbase.org...
Null miranda.pictar.targetscan.targetsUnion.hsa-miR-149 View Gene Set 6.986e-12 1859 1.757e-10 92 microRNA targets for miranda.pictar.targetscan.targetsUnion.hsa-miR-149 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-342-5p View Gene Set 7.083e-12 1470 1.762e-10 93 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-342-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-324-5p View Gene Set 7.984e-12 1517 1.965e-10 94 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-324-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-769-3p View Gene Set 9.343e-12 1837 2.276e-10 95 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-769-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-485-5p View Gene Set 1.353e-11 2002 3.262e-10 96 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-485-5p from miRNAtargetUnion www.mirbase.org...
Null mirbase.pictar.targetscan.targetsUnion.hsa-miR-149 View Gene Set 1.636e-11 940 3.902e-10 97 microRNA targets for mirbase.pictar.targetscan.targetsUnion.hsa-miR-149 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-324-5p View Gene Set 2.03e-11 886 4.794e-10 98 microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-324-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-214 View Gene Set 3.743e-11 2872 8.75e-10 99 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-214 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-296-3p View Gene Set 3.927e-11 1767 9.086e-10 100 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-296-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-146b-3p View Gene Set 4.803e-11 1606 1.1e-09 101 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-146b-3p from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-339-5p View Gene Set 5.045e-11 954 1.145e-09 102 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-339-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-491-5p View Gene Set 7.882e-11 1429 1.756e-09 103 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-491-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-874 View Gene Set 7.892e-11 1362 1.756e-09 103 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-874 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-504 View Gene Set 1.311e-10 834 2.889e-09 105 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-504 from miRNAtargetUnion www.mirbase.org...
Null mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-326 View Gene Set 1.586e-10 652 3.461e-09 106 microRNA targets for mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-326 from miRNAtargetUnion www.mirbase.org...
Null mirbase.pictar.targetscan.targetsUnion.hsa-miR-324-5p View Gene Set 1.763e-10 892 3.814e-09 107 microRNA targets for mirbase.pictar.targetscan.targetsUnion.hsa-miR-324-5p from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-324-5p View Gene Set 1.809e-10 934 3.875e-09 108 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-324-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-24 View Gene Set 1.83e-10 1845 3.886e-09 109 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-24 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-193a-5p View Gene Set 2.208e-10 1799 4.645e-09 110 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-193a-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-125a-5p View Gene Set 2.375e-10 1986 4.952e-09 111 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-125a-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.tarbase.targetscan.targetsUnion.hsa-miR-24 View Gene Set 2.501e-10 1760 5.167e-09 112 microRNA targets for miranda.tarbase.targetscan.targetsUnion.hsa-miR-24 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-125b View Gene Set 2.599e-10 1252 5.322e-09 113 microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-125b from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-125b View Gene Set 2.767e-10 1376 5.617e-09 114 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-125b from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-125a-5p View Gene Set 2.89e-10 2173 5.816e-09 115 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-125a-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-492 View Gene Set 3.229e-10 1377 6.43e-09 116 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-492 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-214 View Gene Set 3.251e-10 1354 6.43e-09 116 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-214 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-572 View Gene Set 4.617e-10 825 9.053e-09 118 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-572 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-24 View Gene Set 6.164e-10 1220 1.199e-08 119 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-24 from miRNAtargetUnion www.mirbase.org...
Null mirbase.tarbase.targetscan.targetsUnion.hsa-miR-24 View Gene Set 7.578e-10 1108 1.461e-08 120 microRNA targets for mirbase.tarbase.targetscan.targetsUnion.hsa-miR-24 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-874 View Gene Set 9.633e-10 975 1.842e-08 121 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-874 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-339-5p View Gene Set 1.03e-09 1458 1.954e-08 122 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-339-5p from miRNAtargetUnion www.mirbase.org...
Null mirbase.pictar.targetscan.targetsUnion.hsa-miR-24 View Gene Set 1.189e-09 1215 2.236e-08 123 microRNA targets for mirbase.pictar.targetscan.targetsUnion.hsa-miR-24 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-602 View Gene Set 1.214e-09 1257 2.266e-08 124 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-602 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-149 View Gene Set 1.329e-09 935 2.461e-08 125 microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-149 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-324-3p View Gene Set 1.41e-09 1096 2.59e-08 126 microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-324-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-611 View Gene Set 1.568e-09 1017 2.857e-08 127 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-611 from miRNAtargetUnion www.mirbase.org...
Null miranda.pictar.targetscan.targetsUnion.hsa-miR-24 View Gene Set 2.094e-09 1840 3.786e-08 128 microRNA targets for miranda.pictar.targetscan.targetsUnion.hsa-miR-24 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-937 View Gene Set 2.342e-09 820 4.201e-08 129 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-937 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-596 View Gene Set 2.392e-09 1484 4.257e-08 130 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-596 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-623 View Gene Set 3.107e-09 1834 5.489e-08 131 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-623 from miRNAtargetUnion www.mirbase.org...
Null mirbase.pictar.tarbase.targetsUnion.hsa-miR-24 View Gene Set 3.224e-09 989 5.652e-08 132 microRNA targets for mirbase.pictar.tarbase.targetsUnion.hsa-miR-24 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-214 View Gene Set 3.549e-09 2461 6.174e-08 133 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-214 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-564 View Gene Set 3.991e-09 1071 6.893e-08 134 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-564 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.tarbase.targetsUnion.hsa-miR-24 View Gene Set 4.589e-09 1680 7.866e-08 135 microRNA targets for miranda.mirtarget2.tarbase.targetsUnion.hsa-miR-24 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-370 View Gene Set 5.2e-09 2143 8.848e-08 136 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-370 from miRNAtargetUnion www.mirbase.org...
Null mirbase.pictar.targetscan.targetsUnion.hsa-miR-125b View Gene Set 6.168e-09 1421 1.042e-07 137 microRNA targets for mirbase.pictar.targetscan.targetsUnion.hsa-miR-125b from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-502-5p View Gene Set 7.775e-09 1725 1.304e-07 138 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-502-5p from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-491-5p View Gene Set 8.234e-09 954 1.371e-07 139 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-491-5p from miRNAtargetUnion www.mirbase.org...
Null mirbase.pictar.targetscan.targetsUnion.hsa-miR-214 View Gene Set 8.552e-09 1420 1.414e-07 140 microRNA targets for mirbase.pictar.targetscan.targetsUnion.hsa-miR-214 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-24 View Gene Set 1.086e-08 1137 1.783e-07 141 microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-24 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-650 View Gene Set 1.105e-08 2314 1.801e-07 142 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-650 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-24 View Gene Set 1.114e-08 1812 1.803e-07 143 microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-24 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-346 View Gene Set 1.678e-08 1502 2.677e-07 144 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-346 from miRNAtargetUnion www.mirbase.org...
Null miranda.pictar.tarbase.targetsUnion.hsa-miR-24 View Gene Set 1.668e-08 1711 2.677e-07 144 microRNA targets for miranda.pictar.tarbase.targetsUnion.hsa-miR-24 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-886-3p View Gene Set 1.839e-08 1039 2.915e-07 146 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-886-3p from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-125a-5p View Gene Set 2.384e-08 1375 3.752e-07 147 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-125a-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-346 View Gene Set 2.634e-08 1493 4.118e-07 148 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-346 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-483-3p View Gene Set 2.824e-08 1648 4.386e-07 149 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-483-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-370 View Gene Set 3.703e-08 2126 5.713e-07 150 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-370 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-423-3p View Gene Set 4.073e-08 1053 6.222e-07 151 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-423-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-769-5p View Gene Set 4.087e-08 1676 6.222e-07 151 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-769-5p from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-214 View Gene Set 4.825e-08 1389 7.298e-07 153 microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-214 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-125b View Gene Set 5.533e-08 1512 8.314e-07 154 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-125b from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-483-5p View Gene Set 8.503e-08 1342 1.269e-06 155 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-483-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-346 View Gene Set 9.077e-08 1521 1.346e-06 156 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-346 from miRNAtargetUnion www.mirbase.org...
Null miranda.pictar.targetscan.targetsUnion.hsa-miR-214 View Gene Set 9.401e-08 2503 1.386e-06 157 microRNA targets for miranda.pictar.targetscan.targetsUnion.hsa-miR-214 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-125b View Gene Set 1.113e-07 1428 1.63e-06 158 microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-125b from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.tarbase.targetsUnion.hsa-miR-24 View Gene Set 1.154e-07 938 1.679e-06 159 microRNA targets for mirbase.mirtarget2.tarbase.targetsUnion.hsa-miR-24 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-542-5p View Gene Set 1.445e-07 1145 2.089e-06 160 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-542-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-647 View Gene Set 2.229e-07 1863 3.204e-06 161 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-647 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-941 View Gene Set 3.296e-07 992 4.708e-06 162 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-941 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-214 View Gene Set 5.452e-07 2511 7.74e-06 163 microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-214 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-324-5p View Gene Set 7.704e-07 924 1.087e-05 164 microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-324-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-504 View Gene Set 1.04e-06 1067 1.458e-05 165 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-504 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-324-5p View Gene Set 1.218e-06 953 1.697e-05 166 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-324-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-642 View Gene Set 1.562e-06 2012 2.16e-05 167 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-642 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-370 View Gene Set 1.568e-06 1067 2.16e-05 167 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-370 from miRNAtargetUnion www.mirbase.org...
Null miranda.pictar.targetscan.targetsUnion.hsa-miR-125b View Gene Set 1.686e-06 1547 2.308e-05 169 microRNA targets for miranda.pictar.targetscan.targetsUnion.hsa-miR-125b from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-671-3p View Gene Set 2.134e-06 1092 2.905e-05 170 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-671-3p from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-551a View Gene Set 2.942e-06 687 3.981e-05 171 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-551a from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-593 View Gene Set 2.963e-06 1838 3.987e-05 172 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-593 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-198 View Gene Set 3.139e-06 2133 4.198e-05 173 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-198 from miRNAtargetUnion www.mirbase.org...
Null miranda.pictar.targetscan.targetsUnion.hsa-miR-324-5p View Gene Set 3.494e-06 915 4.647e-05 174 microRNA targets for miranda.pictar.targetscan.targetsUnion.hsa-miR-324-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-662 View Gene Set 4.414e-06 984 5.837e-05 175 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-662 from miRNAtargetUnion www.mirbase.org...
Null miranda.pictar.targetscan.targetsUnion.hsa-miR-346 View Gene Set 5.238e-06 1078 6.887e-05 176 microRNA targets for miranda.pictar.targetscan.targetsUnion.hsa-miR-346 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-220c View Gene Set 5.453e-06 2612 7.129e-05 177 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-220c from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-604 View Gene Set 5.851e-06 1079 7.606e-05 178 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-604 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-551a View Gene Set 6.14e-06 920 7.937e-05 179 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-551a from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-485-5p View Gene Set 6.711e-06 969 8.628e-05 180 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-485-5p from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-125a-3p View Gene Set 7.65e-06 1095 9.78e-05 181 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-125a-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-345 View Gene Set 8.833e-06 1516 0.0001123 182 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-345 from miRNAtargetUnion www.mirbase.org...
Null mirbase.pictar.targetscan.targetsUnion.hsa-miR-184 View Gene Set 1.054e-05 738 0.0001333 183 microRNA targets for mirbase.pictar.targetscan.targetsUnion.hsa-miR-184 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-28-5p View Gene Set 1.068e-05 2099 0.0001343 184 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-28-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-551a View Gene Set 1.333e-05 924 0.0001667 185 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-551a from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-184 View Gene Set 1.487e-05 736 0.0001847 186 microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-184 from miRNAtargetUnion www.mirbase.org...
Null mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-328 View Gene Set 1.493e-05 380 0.0001847 186 microRNA targets for mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-328 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-184 View Gene Set 1.866e-05 735 0.0002296 188 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-184 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-28-5p View Gene Set 1.929e-05 2140 0.0002349 189 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-28-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-346 View Gene Set 1.921e-05 1115 0.0002349 189 microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-346 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-346 View Gene Set 2.173e-05 1104 0.0002633 191 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-346 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-615-3p View Gene Set 2.706e-05 481 0.0003261 192 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-615-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-923 View Gene Set 2.732e-05 1070 0.0003276 193 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-923 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-184 View Gene Set 3.355e-05 1069 0.0004002 194 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-184 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-184 View Gene Set 3.712e-05 1064 0.0004405 195 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-184 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-588 View Gene Set 4.51e-05 1676 0.0005324 196 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-588 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-184 View Gene Set 4.745e-05 1066 0.0005574 197 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-184 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-571 View Gene Set 5.762e-05 1591 0.0006734 198 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-571 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-551b View Gene Set 5.976e-05 673 0.0006948 199 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-551b from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-432 View Gene Set 6.234e-05 2471 0.0007212 200 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-432 from miRNAtargetUnion www.mirbase.org...

Gene Set Collection: hprdBatch.UP

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null Hedgehog Signaling Pathway View Gene Set 0.002882 22 0.02882 1 From NetPath for Hedgehog Signaling Pathway www.netpath.org...
Null IL-7 Signaling Pathway View Gene Set 0.002379 56 0.02882 1 From NetPath for IL-7 Signaling Pathway www.netpath.org...
Null IL-3 Signaling Pathway View Gene Set 0.004698 40 0.03132 3 From NetPath for IL-3 Signaling Pathway www.netpath.org...

Gene Set Collection: hprdBatch.DOWN

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null IL-4 Signaling Pathway View Gene Set 3.516e-05 90 0.0006681 1 From NetPath for IL-4 Signaling Pathway www.netpath.org...

Gene Set Collection: hprdBatch.DIFFERENT

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null Hedgehog Signaling Pathway View Gene Set 0.001773 25 0.01825 1 From NetPath for Hedgehog Signaling Pathway www.netpath.org...
Null IL-3 Signaling Pathway View Gene Set 0.002102 49 0.01825 1 From NetPath for IL-3 Signaling Pathway www.netpath.org...
Null IL-7 Signaling Pathway View Gene Set 0.002737 69 0.01825 1 From NetPath for IL-7 Signaling Pathway www.netpath.org...
Null IL-2 Signaling Pathway View Gene Set 0.008599 685 0.043 4 From NetPath for IL-2 Signaling Pathway www.netpath.org...

Gene Set Collection: hprdManual.DOWN

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null Leptin View Gene Set 6.776e-07 79 1.287e-05 1 From NetPath for Leptin www.netpath.org...
Null IL4 View Gene Set 5.053e-05 77 0.00048 2 From NetPath for IL4 www.netpath.org...

Gene Set Collection: hprdManual.DIFFERENT

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null Leptin View Gene Set 2.007e-08 110 4.818e-07 1 From NetPath for Leptin www.netpath.org...

Gene Set Collection: tfbsK3Z3

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null V_NFE2_01 View Gene Set 6.701e-07 213 0.0001427 1 List of genes containing a conserved (FDR < 0.1%) V$NFE2_01 TFBS located within 3 kb around the TSS for the NF-E2 transcription factor www.gene-regula...
Null V_NRSF_01 View Gene Set 2.508e-05 256 0.002671 2 List of genes containing a conserved (FDR < 0.1%) V$NRSF_01 TFBS located within 3 kb around the TSS for the NRSF form 1 transcription factor www.gene-regula...
Null V_P300_01 View Gene Set 8.392e-05 91 0.00505 3 List of genes containing a conserved (FDR < 0.1%) V$P300_01 TFBS located within 3 kb around the TSS for the p300 transcription factor www.gene-regula...
Null V_RFX1_02 View Gene Set 9.484e-05 364 0.00505 3 List of genes containing a conserved (FDR < 0.1%) V$RFX1_02 TFBS located within 3 kb around the TSS for the RFX1 transcription factor www.gene-regula...
Null V_HAND1E47_01 View Gene Set 0.0003119 82 0.01329 5 List of genes containing a conserved (FDR < 0.1%) V$HAND1E47_01 TFBS located within 3 kb around the TSS for the E47 transcription factor www.gene-regula...
Null V_AP1_01 View Gene Set 0.0006641 169 0.02021 6 List of genes containing a conserved (FDR < 0.1%) V$AP1_01 TFBS located within 3 kb around the TSS for the AP-1 transcription factor www.gene-regula...
Null V_CREL_01 View Gene Set 0.0005813 86 0.02021 6 List of genes containing a conserved (FDR < 0.1%) V$CREL_01 TFBS located within 3 kb around the TSS for the c-Rel transcription factor www.gene-regula...
Null V_OCT_C View Gene Set 0.0008371 316 0.02229 8 List of genes containing a conserved (FDR < 0.1%) V$OCT_C TFBS located within 3 kb around the TSS for the Oct-B1 transcription factor www.gene-regula...
Null V_SEF1_C View Gene Set 0.0009431 141 0.02232 9 List of genes containing a conserved (FDR < 0.1%) V$SEF1_C TFBS located within 3 kb around the TSS for the SEF-1 (1) transcription factor www.gene-regula...
Null V_BACH1_01 View Gene Set 0.00119 306 0.02386 10 List of genes containing a conserved (FDR < 0.1%) V$BACH1_01 TFBS located within 3 kb around the TSS for the Bach1 transcription factor www.gene-regula...
Null V_MIF1_01 View Gene Set 0.001232 183 0.02386 10 List of genes containing a conserved (FDR < 0.1%) V$MIF1_01 TFBS located within 3 kb around the TSS for the MIF-1 transcription factor www.gene-regula...
Null V_ROAZ_01 View Gene Set 0.001777 189 0.03155 12 List of genes containing a conserved (FDR < 0.1%) V$ROAZ_01 TFBS located within 3 kb around the TSS for the Roaz transcription factor www.gene-regula...
Null V_PPARG_01 View Gene Set 0.002244 386 0.03676 13 List of genes containing a conserved (FDR < 0.1%) V$PPARG_01 TFBS located within 3 kb around the TSS for the PPAR-gamma1 transcription factor www.gene-regula...
Null V_OCT1_07 View Gene Set 0.003117 213 0.04426 14 List of genes containing a conserved (FDR < 0.1%) V$OCT1_07 TFBS located within 3 kb around the TSS for the POU2F1 transcription factor www.gene-regula...
Null V_SREBP1_02 View Gene Set 0.002947 172 0.04426 14 List of genes containing a conserved (FDR < 0.1%) V$SREBP1_02 TFBS located within 3 kb around the TSS for the SREBP-1a transcription factor www.gene-regula...
Null V_PAX4_04 View Gene Set 0.003571 39 0.04474 16 List of genes containing a conserved (FDR < 0.1%) V$PAX4_04 TFBS located within 3 kb around the TSS for the Pax-4a transcription factor www.gene-regula...
Null V_RREB1_01 View Gene Set 0.003566 150 0.04474 16 List of genes containing a conserved (FDR < 0.1%) V$RREB1_01 TFBS located within 3 kb around the TSS for the RREB-1 transcription factor www.gene-regula...
Null V_PPARG_03 View Gene Set 0.003793 178 0.04488 18 List of genes containing a conserved (FDR < 0.1%) V$PPARG_03 TFBS located within 3 kb around the TSS for the PPAR-gamma1 transcription factor www.gene-regula...