Results

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AFA results for: VPA1e03.ls

Click on the heading for any column to sort by that column.

Gene Set Collection: KEGG

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
KEGG 04514 View Gene Set 3.426e-13 135 7.332e-11 1 Cell adhesion molecules (CAMs) www.genome.jp/d...
KEGG 04080 View Gene Set 9.03e-11 272 9.662e-09 2 Neuroactive ligand-receptor interaction www.genome.jp/d...
KEGG 04650 View Gene Set 4.088e-08 137 2.916e-06 3 Natural killer cell mediated cytotoxicity www.genome.jp/d...
KEGG 04640 View Gene Set 3.266e-07 88 1.747e-05 4 Hematopoietic cell lineage www.genome.jp/d...
KEGG 04020 View Gene Set 9.129e-07 178 3.907e-05 5 Calcium signaling pathway www.genome.jp/d...
KEGG 04145 View Gene Set 1.148e-06 158 4.094e-05 6 Phagosome www.genome.jp/d...
KEGG 05332 View Gene Set 1.585e-06 43 4.847e-05 7 Graft-versus-host disease www.genome.jp/d...
KEGG 04670 View Gene Set 2.846e-06 118 7.612e-05 8 Leukocyte transendothelial migration www.genome.jp/d...
KEGG 04360 View Gene Set 4.243e-06 129 0.0001009 9 Axon guidance www.genome.jp/d...
KEGG 04912 View Gene Set 8.284e-06 101 0.0001773 10 GnRH signaling pathway www.genome.jp/d...
KEGG 04664 View Gene Set 1.086e-05 79 0.0002112 11 Fc epsilon RI signaling pathway www.genome.jp/d...
KEGG 04910 View Gene Set 1.339e-05 137 0.0002388 12 Insulin signaling pathway www.genome.jp/d...
KEGG 04062 View Gene Set 2.051e-05 189 0.0003376 13 Chemokine signaling pathway www.genome.jp/d...
KEGG 04810 View Gene Set 2.636e-05 216 0.000403 14 Regulation of actin cytoskeleton www.genome.jp/d...
KEGG 05200 View Gene Set 2.986e-05 328 0.000426 15 Pathways in cancer www.genome.jp/d...
KEGG 04940 View Gene Set 3.288e-05 45 0.0004397 16 Type I diabetes mellitus www.genome.jp/d...
KEGG 04510 View Gene Set 5.667e-05 201 0.0007133 17 Focal adhesion www.genome.jp/d...
KEGG 04612 View Gene Set 8.323e-05 78 0.0008852 18 Antigen processing and presentation www.genome.jp/d...
KEGG 04660 View Gene Set 8.88e-05 108 0.0008852 18 T cell receptor signaling pathway www.genome.jp/d...
KEGG 04722 View Gene Set 8.112e-05 126 0.0008852 18 Neurotrophin signaling pathway www.genome.jp/d...
KEGG 05320 View Gene Set 9.1e-05 54 0.0008852 18 Autoimmune thyroid disease www.genome.jp/d...
KEGG 05330 View Gene Set 7.612e-05 39 0.0008852 18 Allograft rejection www.genome.jp/d...
KEGG 04930 View Gene Set 0.000113 47 0.001051 23 Type II diabetes mellitus www.genome.jp/d...
KEGG 04060 View Gene Set 0.0001228 266 0.001095 24 Cytokine-cytokine receptor interaction www.genome.jp/d...
KEGG 04370 View Gene Set 0.0001633 76 0.001398 25 VEGF signaling pathway www.genome.jp/d...
KEGG 04971 View Gene Set 0.0002131 74 0.001754 26 Gastric acid secretion www.genome.jp/d...
KEGG 04010 View Gene Set 0.0003415 267 0.002707 27 MAPK signaling pathway www.genome.jp/d...
KEGG 05414 View Gene Set 0.000381 92 0.002912 28 Dilated cardiomyopathy www.genome.jp/d...
KEGG 05340 View Gene Set 0.000404 35 0.002981 29 Primary immunodeficiency www.genome.jp/d...
KEGG 04270 View Gene Set 0.0005685 116 0.003713 30 Vascular smooth muscle contraction www.genome.jp/d...
KEGG 04340 View Gene Set 0.0005878 56 0.003713 30 Hedgehog signaling pathway www.genome.jp/d...
KEGG 05144 View Gene Set 0.0005899 51 0.003713 30 Malaria www.genome.jp/d...
KEGG 05214 View Gene Set 0.0005376 65 0.003713 30 Glioma www.genome.jp/d...
KEGG 05410 View Gene Set 0.0005844 85 0.003713 30 Hypertrophic cardiomyopathy (HCM) www.genome.jp/d...
KEGG 04970 View Gene Set 0.0008795 89 0.005328 35 Salivary secretion www.genome.jp/d...
KEGG 05100 View Gene Set 0.0008964 73 0.005328 35 Bacterial invasion of epithelial cells www.genome.jp/d...
KEGG 00982 View Gene Set 0.001014 73 0.005712 37 Drug metabolism - cytochrome P450 www.genome.jp/d...
KEGG 04142 View Gene Set 0.001012 121 0.005712 37 Lysosome www.genome.jp/d...
KEGG 04742 View Gene Set 0.001232 52 0.006758 39 Taste transduction www.genome.jp/d...
KEGG 04740 View Gene Set 0.001283 388 0.006863 40 Olfactory transduction www.genome.jp/d...
KEGG 04070 View Gene Set 0.001465 78 0.007646 41 Phosphatidylinositol signaling system www.genome.jp/d...
KEGG 00590 View Gene Set 0.001559 58 0.007945 42 Arachidonic acid metabolism www.genome.jp/d...
KEGG 05412 View Gene Set 0.001687 76 0.008396 43 Arrhythmogenic right ventricular cardiomyopathy (ARVC) www.genome.jp/d...
KEGG 04744 View Gene Set 0.001823 29 0.008864 44 Phototransduction www.genome.jp/d...
KEGG 04916 View Gene Set 0.002089 102 0.009935 45 Melanogenesis www.genome.jp/d...
KEGG 05217 View Gene Set 0.002218 55 0.01032 46 Basal cell carcinoma www.genome.jp/d...
KEGG 04966 View Gene Set 0.002548 27 0.0116 47 Collecting duct acid secretion www.genome.jp/d...
KEGG 04012 View Gene Set 0.002904 87 0.01295 48 ErbB signaling pathway www.genome.jp/d...
KEGG 04666 View Gene Set 0.003016 95 0.01317 49 Fc gamma R-mediated phagocytosis www.genome.jp/d...
KEGG 00910 View Gene Set 0.003328 23 0.01424 50 Nitrogen metabolism www.genome.jp/d...
KEGG 04672 View Gene Set 0.003483 49 0.01461 51 Intestinal immune network for IgA production www.genome.jp/d...
KEGG 05110 View Gene Set 0.003739 56 0.01539 52 Vibrio cholerae infection www.genome.jp/d...
KEGG 05212 View Gene Set 0.004206 70 0.01698 53 Pancreatic cancer www.genome.jp/d...
KEGG 00232 View Gene Set 0.004503 7 0.01762 54 Caffeine metabolism www.genome.jp/d...
KEGG 04512 View Gene Set 0.004529 84 0.01762 54 ECM-receptor interaction www.genome.jp/d...
KEGG 00330 View Gene Set 0.005472 54 0.02091 56 Arginine and proline metabolism www.genome.jp/d...
KEGG 04144 View Gene Set 0.005996 205 0.02251 57 Endocytosis www.genome.jp/d...
KEGG 05014 View Gene Set 0.006718 53 0.02479 58 Amyotrophic lateral sclerosis (ALS) www.genome.jp/d...
KEGG 04620 View Gene Set 0.008296 102 0.02987 59 Toll-like receptor signaling pathway www.genome.jp/d...
KEGG 05140 View Gene Set 0.008374 73 0.02987 59 Leishmaniasis www.genome.jp/d...
KEGG 04662 View Gene Set 0.01045 75 0.03665 61 B cell receptor signaling pathway www.genome.jp/d...
KEGG 00533 View Gene Set 0.0108 15 0.03729 62 Glycosaminoglycan biosynthesis - keratan sulfate www.genome.jp/d...
KEGG 04146 View Gene Set 0.01193 78 0.04053 63 Peroxisome www.genome.jp/d...
KEGG 04920 View Gene Set 0.01212 67 0.04053 63 Adipocytokine signaling pathway www.genome.jp/d...
KEGG 05221 View Gene Set 0.01297 60 0.04271 65 Acute myeloid leukemia www.genome.jp/d...
KEGG 00562 View Gene Set 0.01428 57 0.04512 66 Inositol phosphate metabolism www.genome.jp/d...
KEGG 00980 View Gene Set 0.01393 71 0.04512 66 Metabolism of xenobiotics by cytochrome P450 www.genome.jp/d...
KEGG 04962 View Gene Set 0.01434 44 0.04512 66 Vasopressin-regulated water reabsorption www.genome.jp/d...
KEGG 04630 View Gene Set 0.01496 155 0.04638 69 Jak-STAT signaling pathway www.genome.jp/d...
KEGG 05223 View Gene Set 0.01566 54 0.04719 70 Non-small cell lung cancer www.genome.jp/d...
KEGG 05310 View Gene Set 0.01563 31 0.04719 70 Asthma www.genome.jp/d...
KEGG 00260 View Gene Set 0.01655 31 0.0492 72 Glycine serine and threonine metabolism www.genome.jp/d...
KEGG 05218 View Gene Set 0.01682 71 0.04932 73 Melanoma www.genome.jp/d...

Gene Set Collection: GO

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
GO GO:0005886 View Gene Set 1.047e-75 3759 1.398e-71 1 plasma membrane amigo.geneontol...
GO GO:0044459 View Gene Set 4.261e-62 2023 2.846e-58 2 plasma membrane part amigo.geneontol...
GO GO:0044425 View Gene Set 9.85e-61 6145 4.387e-57 3 membrane part amigo.geneontol...
GO GO:0016020 View Gene Set 1.171e-55 7286 3.911e-52 4 membrane amigo.geneontol...
GO GO:0031224 View Gene Set 1.851e-55 5387 4.947e-52 5 intrinsic to membrane amigo.geneontol...
GO GO:0016021 View Gene Set 4.01e-51 5278 8.93e-48 6 integral to membrane amigo.geneontol...
GO GO:0031226 View Gene Set 3.728e-45 1208 7.116e-42 7 intrinsic to plasma membrane amigo.geneontol...
GO GO:0005887 View Gene Set 2.632e-44 1186 4.396e-41 8 integral to plasma membrane amigo.geneontol...
GO GO:0004871 View Gene Set 1.273e-42 2128 1.701e-39 9 signal transducer activity amigo.geneontol...
GO GO:0060089 View Gene Set 1.273e-42 2128 1.701e-39 9 molecular transducer activity amigo.geneontol...
GO GO:0004872 View Gene Set 1.853e-42 1688 2.251e-39 11 receptor activity amigo.geneontol...
GO GO:0032501 View Gene Set 2.556e-32 4631 2.846e-29 12 multicellular organismal process amigo.geneontol...
GO GO:0023052 View Gene Set 7.049e-31 3571 7.244e-28 13 signaling amigo.geneontol...
GO GO:0004888 View Gene Set 9.156e-30 1275 8.738e-27 14 transmembrane receptor activity amigo.geneontol...
GO GO:0007166 View Gene Set 6.627e-23 1497 5.903e-20 15 cell surface receptor linked signaling pathway amigo.geneontol...
GO GO:0023060 View Gene Set 3.181e-22 2571 2.656e-19 16 signal transmission amigo.geneontol...
GO GO:0023046 View Gene Set 5.229e-22 2577 4.109e-19 17 signaling process amigo.geneontol...
GO GO:0005576 View Gene Set 4.24e-21 2036 3.147e-18 18 extracellular region amigo.geneontol...
GO GO:0050896 View Gene Set 5.497e-21 3765 3.865e-18 19 response to stimulus amigo.geneontol...
GO GO:0003008 View Gene Set 1.058e-20 1632 7.066e-18 20 system process amigo.geneontol...
GO GO:0023033 View Gene Set 5.588e-20 2547 3.555e-17 21 signaling pathway amigo.geneontol...
GO GO:0007154 View Gene Set 3.42e-19 1687 2.077e-16 22 cell communication amigo.geneontol...
GO GO:0065008 View Gene Set 2.726e-17 1741 1.584e-14 23 regulation of biological quality amigo.geneontol...
GO GO:0007165 View Gene Set 4.854e-17 2232 2.594e-14 24 signal transduction amigo.geneontol...
GO GO:0048856 View Gene Set 4.827e-17 2763 2.594e-14 24 anatomical structure development amigo.geneontol...
GO GO:0007155 View Gene Set 7.469e-17 827 3.58e-14 26 cell adhesion amigo.geneontol...
GO GO:0022610 View Gene Set 7.469e-17 828 3.58e-14 26 biological adhesion amigo.geneontol...
GO GO:0048731 View Gene Set 7.503e-17 2544 3.58e-14 26 system development amigo.geneontol...
GO GO:0007267 View Gene Set 1.24e-15 720 5.712e-13 29 cell-cell signaling amigo.geneontol...
GO GO:0002376 View Gene Set 3.419e-14 1101 1.523e-11 30 immune system process amigo.geneontol...
GO GO:0042995 View Gene Set 5.718e-14 766 2.464e-11 31 cell projection amigo.geneontol...
GO GO:0006955 View Gene Set 5.933e-14 732 2.477e-11 32 immune response amigo.geneontol...
GO GO:0050877 View Gene Set 6.203e-14 1272 2.511e-11 33 neurological system process amigo.geneontol...
GO GO:0006811 View Gene Set 8.174e-14 829 3.212e-11 34 ion transport amigo.geneontol...
GO GO:0032502 View Gene Set 8.765e-14 3351 3.346e-11 35 developmental process amigo.geneontol...
GO GO:0015075 View Gene Set 1.409e-13 715 5.23e-11 36 ion transmembrane transporter activity amigo.geneontol...
GO GO:0007275 View Gene Set 1.973e-13 3067 7.123e-11 37 multicellular organismal development amigo.geneontol...
GO GO:0004930 View Gene Set 3.272e-13 855 1.151e-10 38 G-protein coupled receptor activity amigo.geneontol...
GO GO:0006952 View Gene Set 3.943e-13 717 1.351e-10 39 defense response amigo.geneontol...
GO GO:0000267 View Gene Set 1.419e-12 1077 4.739e-10 40 cell fraction amigo.geneontol...
GO GO:0022838 View Gene Set 1.67e-12 393 5.441e-10 41 substrate-specific channel activity amigo.geneontol...
GO GO:0030154 View Gene Set 1.756e-12 1834 5.585e-10 42 cell differentiation amigo.geneontol...
GO GO:0007186 View Gene Set 2.141e-12 543 6.356e-10 43 G-protein coupled receptor protein signaling pathway amigo.geneontol...
GO GO:0035556 View Gene Set 2.098e-12 1205 6.356e-10 43 intracellular signal transduction amigo.geneontol...
GO GO:0022857 View Gene Set 2.132e-12 905 6.356e-10 43 transmembrane transporter activity amigo.geneontol...
GO GO:0009611 View Gene Set 2.205e-12 621 6.403e-10 46 response to wounding amigo.geneontol...
GO GO:0051239 View Gene Set 2.413e-12 1088 6.86e-10 47 regulation of multicellular organismal process amigo.geneontol...
GO GO:0006812 View Gene Set 2.475e-12 587 6.89e-10 48 cation transport amigo.geneontol...
GO GO:0015267 View Gene Set 3.073e-12 409 8.211e-10 49 channel activity amigo.geneontol...
GO GO:0022803 View Gene Set 3.073e-12 410 8.211e-10 49 passive transmembrane transporter activity amigo.geneontol...
GO GO:0031410 View Gene Set 3.429e-12 688 8.81e-10 51 cytoplasmic vesicle amigo.geneontol...
GO GO:0022891 View Gene Set 3.404e-12 823 8.81e-10 51 substrate-specific transmembrane transporter activity amigo.geneontol...
GO GO:0048869 View Gene Set 3.629e-12 1883 9.148e-10 53 cellular developmental process amigo.geneontol...
GO GO:0048513 View Gene Set 5.438e-12 1931 1.345e-09 54 organ development amigo.geneontol...
GO GO:0007268 View Gene Set 6.707e-12 362 1.629e-09 55 synaptic transmission amigo.geneontol...
GO GO:0008324 View Gene Set 7.076e-12 548 1.688e-09 56 cation transmembrane transporter activity amigo.geneontol...
GO GO:0042221 View Gene Set 8.578e-12 1516 2.011e-09 57 response to chemical stimulus amigo.geneontol...
GO GO:0031982 View Gene Set 1.075e-11 718 2.477e-09 58 vesicle amigo.geneontol...
GO GO:0019226 View Gene Set 1.513e-11 421 3.39e-09 59 transmission of nerve impulse amigo.geneontol...
GO GO:0045202 View Gene Set 1.522e-11 371 3.39e-09 59 synapse amigo.geneontol...
GO GO:0016023 View Gene Set 1.678e-11 651 3.675e-09 61 cytoplasmic membrane-bounded vesicle amigo.geneontol...
GO GO:0031988 View Gene Set 3.035e-11 670 6.54e-09 62 membrane-bounded vesicle amigo.geneontol...
GO GO:0009897 View Gene Set 3.491e-11 140 7.403e-09 63 external side of plasma membrane amigo.geneontol...
GO GO:0010646 View Gene Set 4.215e-11 1173 8.799e-09 64 regulation of cell communication amigo.geneontol...
GO GO:0005216 View Gene Set 4.56e-11 382 9.372e-09 65 ion channel activity amigo.geneontol...
GO GO:0009605 View Gene Set 5.127e-11 666 1.038e-08 66 response to external stimulus amigo.geneontol...
GO GO:0009986 View Gene Set 5.521e-11 350 1.101e-08 67 cell surface amigo.geneontol...
GO GO:0005509 View Gene Set 5.869e-11 626 1.153e-08 68 calcium ion binding amigo.geneontol...
GO GO:0009653 View Gene Set 6.616e-11 1301 1.281e-08 69 anatomical structure morphogenesis amigo.geneontol...
GO GO:0022892 View Gene Set 1.419e-10 964 2.709e-08 70 substrate-specific transporter activity amigo.geneontol...
GO GO:0044421 View Gene Set 1.567e-10 1001 2.949e-08 71 extracellular region part amigo.geneontol...
GO GO:0007399 View Gene Set 1.738e-10 1174 3.225e-08 72 nervous system development amigo.geneontol...
GO GO:0005626 View Gene Set 2.253e-10 830 4.124e-08 73 insoluble fraction amigo.geneontol...
GO GO:0044433 View Gene Set 2.793e-10 274 5.042e-08 74 cytoplasmic vesicle part amigo.geneontol...
GO GO:0030001 View Gene Set 4.352e-10 496 7.752e-08 75 metal ion transport amigo.geneontol...
GO GO:0048583 View Gene Set 4.755e-10 545 8.358e-08 76 regulation of response to stimulus amigo.geneontol...
GO GO:0005261 View Gene Set 5.089e-10 271 8.83e-08 77 cation channel activity amigo.geneontol...
GO GO:0022836 View Gene Set 5.163e-10 309 8.843e-08 78 gated channel activity amigo.geneontol...
GO GO:0006954 View Gene Set 1.168e-09 380 1.976e-07 79 inflammatory response amigo.geneontol...
GO GO:0005215 View Gene Set 1.551e-09 1174 2.589e-07 80 transporter activity amigo.geneontol...
GO GO:0010033 View Gene Set 2.23e-09 903 3.679e-07 81 response to organic substance amigo.geneontol...
GO GO:0030659 View Gene Set 2.563e-09 235 4.176e-07 82 cytoplasmic vesicle membrane amigo.geneontol...
GO GO:0005624 View Gene Set 2.71e-09 799 4.362e-07 83 membrane fraction amigo.geneontol...
GO GO:0051049 View Gene Set 3.181e-09 525 5.06e-07 84 regulation of transport amigo.geneontol...
GO GO:0051179 View Gene Set 4.353e-09 3376 6.841e-07 85 localization amigo.geneontol...
GO GO:0032879 View Gene Set 4.696e-09 741 7.296e-07 86 regulation of localization amigo.geneontol...
GO GO:0030136 View Gene Set 4.957e-09 147 7.612e-07 87 clathrin-coated vesicle amigo.geneontol...
GO GO:0022008 View Gene Set 6.5e-09 646 9.868e-07 88 neurogenesis amigo.geneontol...
GO GO:0046903 View Gene Set 8.125e-09 502 1.22e-06 89 secretion amigo.geneontol...
GO GO:0048699 View Gene Set 9.188e-09 601 1.364e-06 90 generation of neurons amigo.geneontol...
GO GO:0030030 View Gene Set 1.121e-08 458 1.645e-06 91 cell projection organization amigo.geneontol...
GO GO:0030054 View Gene Set 2.519e-08 539 3.658e-06 92 cell junction amigo.geneontol...
GO GO:0031012 View Gene Set 3.898e-08 371 5.6e-06 93 extracellular matrix amigo.geneontol...
GO GO:0044456 View Gene Set 4.105e-08 274 5.835e-06 94 synapse part amigo.geneontol...
GO GO:0023034 View Gene Set 4.214e-08 1522 5.864e-06 95 intracellular signaling pathway amigo.geneontol...
GO GO:0012506 View Gene Set 4.183e-08 246 5.864e-06 95 vesicle membrane amigo.geneontol...
GO GO:0042592 View Gene Set 5.564e-08 844 7.663e-06 97 homeostatic process amigo.geneontol...
GO GO:0070838 View Gene Set 5.735e-08 203 7.819e-06 98 divalent metal ion transport amigo.geneontol...
GO GO:0006810 View Gene Set 6.166e-08 2892 8.322e-06 99 transport amigo.geneontol...
GO GO:0003013 View Gene Set 7.175e-08 250 9.217e-06 100 circulatory system process amigo.geneontol...
GO GO:0008015 View Gene Set 7.175e-08 250 9.217e-06 100 blood circulation amigo.geneontol...
GO GO:0030182 View Gene Set 6.919e-08 546 9.217e-06 100 neuron differentiation amigo.geneontol...
GO GO:0035466 View Gene Set 7.12e-08 1022 9.217e-06 100 regulation of signaling pathway amigo.geneontol...
GO GO:0048002 View Gene Set 7.052e-08 27 9.217e-06 100 antigen processing and presentation of peptide antigen amigo.geneontol...
GO GO:0016337 View Gene Set 7.284e-08 318 9.268e-06 105 cell-cell adhesion amigo.geneontol...
GO GO:0006629 View Gene Set 8.39e-08 910 1.057e-05 106 lipid metabolic process amigo.geneontol...
GO GO:0015672 View Gene Set 8.466e-08 306 1.057e-05 106 monovalent inorganic cation transport amigo.geneontol...
GO GO:0051234 View Gene Set 1.155e-07 2928 1.428e-05 108 establishment of localization amigo.geneontol...
GO GO:0006816 View Gene Set 1.324e-07 196 1.623e-05 109 calcium ion transport amigo.geneontol...
GO GO:0030135 View Gene Set 1.422e-07 179 1.727e-05 110 coated vesicle amigo.geneontol...
GO GO:0009719 View Gene Set 1.484e-07 513 1.786e-05 111 response to endogenous stimulus amigo.geneontol...
GO GO:0048468 View Gene Set 1.568e-07 804 1.871e-05 112 cell development amigo.geneontol...
GO GO:0051050 View Gene Set 1.696e-07 280 2.005e-05 113 positive regulation of transport amigo.geneontol...
GO GO:0048878 View Gene Set 1.76e-07 563 2.063e-05 114 chemical homeostasis amigo.geneontol...
GO GO:0007169 View Gene Set 1.779e-07 296 2.067e-05 115 transmembrane receptor protein tyrosine kinase signaling pathway amigo.geneontol...
GO GO:0031175 View Gene Set 2.413e-07 322 2.779e-05 116 neuron projection development amigo.geneontol...
GO GO:0015674 View Gene Set 2.536e-07 239 2.896e-05 117 di- tri-valent inorganic cation transport amigo.geneontol...
GO GO:0007243 View Gene Set 2.736e-07 597 3.046e-05 118 intracellular protein kinase cascade amigo.geneontol...
GO GO:0007610 View Gene Set 2.692e-07 492 3.046e-05 118 behavior amigo.geneontol...
GO GO:0023014 View Gene Set 2.736e-07 597 3.046e-05 118 signal transmission via phosphorylation event amigo.geneontol...
GO GO:0019882 View Gene Set 2.903e-07 62 3.205e-05 121 antigen processing and presentation amigo.geneontol...
GO GO:0006928 View Gene Set 2.981e-07 653 3.264e-05 122 cellular component movement amigo.geneontol...
GO GO:0034702 View Gene Set 3.105e-07 210 3.372e-05 123 ion channel complex amigo.geneontol...
GO GO:0050776 View Gene Set 3.452e-07 249 3.72e-05 124 regulation of immune response amigo.geneontol...
GO GO:0000902 View Gene Set 4.331e-07 380 4.629e-05 125 cell morphogenesis amigo.geneontol...
GO GO:0002682 View Gene Set 5.072e-07 425 5.378e-05 126 regulation of immune system process amigo.geneontol...
GO GO:0048666 View Gene Set 5.938e-07 399 6.247e-05 127 neuron development amigo.geneontol...
GO GO:0030665 View Gene Set 6.306e-07 79 6.582e-05 128 clathrin coated vesicle membrane amigo.geneontol...
GO GO:0032989 View Gene Set 6.454e-07 423 6.685e-05 129 cellular component morphogenesis amigo.geneontol...
GO GO:0043005 View Gene Set 7.1e-07 371 7.297e-05 130 neuron projection amigo.geneontol...
GO GO:0009725 View Gene Set 7.993e-07 460 8.151e-05 131 response to hormone stimulus amigo.geneontol...
GO GO:0044057 View Gene Set 9.266e-07 315 9.378e-05 132 regulation of system process amigo.geneontol...
GO GO:0006468 View Gene Set 9.707e-07 807 9.75e-05 133 protein amino acid phosphorylation amigo.geneontol...
GO GO:0023051 View Gene Set 1.031e-06 794 0.0001028 134 regulation of signaling process amigo.geneontol...
GO GO:0008021 View Gene Set 1.071e-06 83 0.000106 135 synaptic vesicle amigo.geneontol...
GO GO:0048667 View Gene Set 1.176e-06 241 0.0001155 136 cell morphogenesis involved in neuron differentiation amigo.geneontol...
GO GO:0009966 View Gene Set 1.185e-06 789 0.0001155 137 regulation of signal transduction amigo.geneontol...
GO GO:0002684 View Gene Set 1.265e-06 274 0.0001221 138 positive regulation of immune system process amigo.geneontol...
GO GO:0048871 View Gene Set 1.27e-06 108 0.0001221 138 multicellular organismal homeostasis amigo.geneontol...
GO GO:0000904 View Gene Set 1.332e-06 305 0.0001271 140 cell morphogenesis involved in differentiation amigo.geneontol...
GO GO:0005244 View Gene Set 1.357e-06 190 0.0001277 141 voltage-gated ion channel activity amigo.geneontol...
GO GO:0022832 View Gene Set 1.357e-06 190 0.0001277 141 voltage-gated channel activity amigo.geneontol...
GO GO:0016323 View Gene Set 1.474e-06 224 0.0001377 143 basolateral plasma membrane amigo.geneontol...
GO GO:0002449 View Gene Set 1.572e-06 110 0.0001458 144 lymphocyte mediated immunity amigo.geneontol...
GO GO:0005615 View Gene Set 1.826e-06 752 0.0001682 145 extracellular space amigo.geneontol...
GO GO:0005578 View Gene Set 1.839e-06 313 0.0001683 146 proteinaceous extracellular matrix amigo.geneontol...
GO GO:0048812 View Gene Set 2.036e-06 247 0.0001838 147 neuron projection morphogenesis amigo.geneontol...
GO GO:0051969 View Gene Set 2.034e-06 137 0.0001838 147 regulation of transmission of nerve impulse amigo.geneontol...
GO GO:0051046 View Gene Set 2.132e-06 243 0.0001912 149 regulation of secretion amigo.geneontol...
GO GO:0050804 View Gene Set 2.387e-06 126 0.0002126 150 regulation of synaptic transmission amigo.geneontol...
GO GO:0031644 View Gene Set 2.752e-06 147 0.0002435 151 regulation of neurological system process amigo.geneontol...
GO GO:0006813 View Gene Set 2.86e-06 137 0.0002514 152 potassium ion transport amigo.geneontol...
GO GO:0009888 View Gene Set 3.032e-06 827 0.0002647 153 tissue development amigo.geneontol...
GO GO:0007167 View Gene Set 3.294e-06 475 0.0002858 154 enzyme linked receptor protein signaling pathway amigo.geneontol...
GO GO:0045177 View Gene Set 3.321e-06 208 0.0002862 155 apical part of cell amigo.geneontol...
GO GO:0007409 View Gene Set 3.368e-06 218 0.0002885 156 axonogenesis amigo.geneontol...
GO GO:0009887 View Gene Set 4.028e-06 659 0.0003398 157 organ morphogenesis amigo.geneontol...
GO GO:0019725 View Gene Set 4.031e-06 500 0.0003398 157 cellular homeostasis amigo.geneontol...
GO GO:0055082 View Gene Set 4.045e-06 411 0.0003398 157 cellular chemical homeostasis amigo.geneontol...
GO GO:0030662 View Gene Set 4.188e-06 105 0.0003497 160 coated vesicle membrane amigo.geneontol...
GO GO:0003014 View Gene Set 4.354e-06 35 0.0003613 161 renal system process amigo.geneontol...
GO GO:0043434 View Gene Set 4.445e-06 201 0.0003665 162 response to peptide hormone stimulus amigo.geneontol...
GO GO:0043062 View Gene Set 5.249e-06 174 0.0004302 163 extracellular structure organization amigo.geneontol...
GO GO:0048858 View Gene Set 5.484e-06 283 0.0004468 164 cell projection morphogenesis amigo.geneontol...
GO GO:0002706 View Gene Set 6.744e-06 50 0.0005461 165 regulation of lymphocyte mediated immunity amigo.geneontol...
GO GO:0042165 View Gene Set 6.789e-06 76 0.0005464 166 neurotransmitter binding amigo.geneontol...
GO GO:0008509 View Gene Set 6.89e-06 148 0.0005512 167 anion transmembrane transporter activity amigo.geneontol...
GO GO:0005529 View Gene Set 7.011e-06 196 0.0005575 168 sugar binding amigo.geneontol...
GO GO:0006873 View Gene Set 7.099e-06 405 0.0005575 169 cellular ion homeostasis amigo.geneontol...
GO GO:0043025 View Gene Set 7.136e-06 182 0.0005575 169 neuronal cell body amigo.geneontol...
GO GO:0044297 View Gene Set 7.136e-06 182 0.0005575 169 cell body amigo.geneontol...
GO GO:0015850 View Gene Set 7.548e-06 51 0.0005863 172 organic alcohol transport amigo.geneontol...
GO GO:0050801 View Gene Set 7.8e-06 441 0.0006024 173 ion homeostasis amigo.geneontol...
GO GO:0002703 View Gene Set 7.955e-06 59 0.0006075 174 regulation of leukocyte mediated immunity amigo.geneontol...
GO GO:0015276 View Gene Set 8.003e-06 128 0.0006075 174 ligand-gated ion channel activity amigo.geneontol...
GO GO:0022834 View Gene Set 8.003e-06 128 0.0006075 174 ligand-gated channel activity amigo.geneontol...
GO GO:0006950 View Gene Set 8.981e-06 1905 0.0006779 177 response to stress amigo.geneontol...
GO GO:0000165 View Gene Set 9.637e-06 299 0.0007233 178 MAPKKK cascade amigo.geneontol...
GO GO:2000026 View Gene Set 1.01e-05 625 0.0007542 179 regulation of multicellular organismal development amigo.geneontol...
GO GO:0004713 View Gene Set 1.05e-05 139 0.0007792 180 protein tyrosine kinase activity amigo.geneontol...
GO GO:0040011 View Gene Set 1.07e-05 617 0.0007899 181 locomotion amigo.geneontol...
GO GO:0030198 View Gene Set 1.086e-05 103 0.0007969 182 extracellular matrix organization amigo.geneontol...
GO GO:0050793 View Gene Set 1.135e-05 748 0.000829 183 regulation of developmental process amigo.geneontol...
GO GO:0060341 View Gene Set 1.174e-05 310 0.0008523 184 regulation of cellular localization amigo.geneontol...
GO GO:0032940 View Gene Set 1.187e-05 392 0.0008543 185 secretion by cell amigo.geneontol...
GO GO:0004714 View Gene Set 1.189e-05 65 0.0008543 185 transmembrane receptor protein tyrosine kinase activity amigo.geneontol...
GO GO:0055065 View Gene Set 1.267e-05 225 0.0009054 187 metal ion homeostasis amigo.geneontol...
GO GO:0001653 View Gene Set 1.307e-05 113 0.0009237 188 peptide receptor activity amigo.geneontol...
GO GO:0008528 View Gene Set 1.307e-05 113 0.0009237 188 peptide receptor activity G-protein coupled amigo.geneontol...
GO GO:0001775 View Gene Set 1.334e-05 389 0.0009334 190 cell activation amigo.geneontol...
GO GO:0050878 View Gene Set 1.33e-05 205 0.0009334 190 regulation of body fluid levels amigo.geneontol...
GO GO:0048167 View Gene Set 1.44e-05 55 0.001002 192 regulation of synaptic plasticity amigo.geneontol...
GO GO:0007187 View Gene Set 1.451e-05 116 0.001004 193 G-protein signaling coupled to cyclic nucleotide second messenger amigo.geneontol...
GO GO:0048168 View Gene Set 1.471e-05 32 0.001013 194 regulation of neuronal synaptic plasticity amigo.geneontol...
GO GO:0045595 View Gene Set 1.493e-05 563 0.001023 195 regulation of cell differentiation amigo.geneontol...
GO GO:0019199 View Gene Set 1.651e-05 82 0.001126 196 transmembrane receptor protein kinase activity amigo.geneontol...
GO GO:0051606 View Gene Set 1.726e-05 117 0.00117 197 detection of stimulus amigo.geneontol...
GO GO:0002791 View Gene Set 1.814e-05 62 0.001218 198 regulation of peptide secretion amigo.geneontol...
GO GO:0090087 View Gene Set 1.814e-05 62 0.001218 198 regulation of peptide transport amigo.geneontol...
GO GO:0002443 View Gene Set 1.936e-05 137 0.001293 200 leukocyte mediated immunity amigo.geneontol...

Gene Set Collection: Broad.c1.CYTOBAND

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad chr19q13 View Gene Set 2.157e-10 765 7.033e-08 1 Genes in cytogenetic band chr19q13 www.broad.mit.e...
Broad chr6p21 View Gene Set 3.738e-07 479 6.093e-05 2 Genes in cytogenetic band chr6p21 www.broad.mit.e...
Broad chr1q23 View Gene Set 0.0003273 120 0.02667 3 Genes in cytogenetic band chr1q23 www.broad.mit.e...
Broad chr16p11 View Gene Set 0.0002922 148 0.02667 3 Genes in cytogenetic band chr16p11 www.broad.mit.e...
Broad chr3p25 View Gene Set 0.0006225 83 0.03437 5 Genes in cytogenetic band chr3p25 www.broad.mit.e...
Broad chr12q13 View Gene Set 0.0006326 257 0.03437 5 Genes in cytogenetic band chr12q13 www.broad.mit.e...

Gene Set Collection: Broad.c2.CGP

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad SHEN_SMARCA2_TARGETS_DN View Gene Set 1.327e-37 334 3.173e-34 1 Genes whose expression negatively correlated with that of SMARCA2 [Gene ID=6595] in prostate cancer samples. www.broad.mit.e...
Broad MOREAUX_MULTIPLE_MYELOMA_BY_TACI_UP View Gene Set 3.628e-26 365 4.339e-23 2 Genes distinguishing in multiple myeloma (MM) samples with higher expression of TACI [Gene ID=23495]. www.broad.mit.e...
Broad DODD_NASOPHARYNGEAL_CARCINOMA_UP View Gene Set 3.73e-21 1582 2.974e-18 3 Genes up-regulated in nasopharyngeal carcinoma (NPC) compared to the normal tissue. www.broad.mit.e...
Broad BENPORATH_ES_WITH_H3K27ME3 View Gene Set 6.958e-17 1094 4.161e-14 4 Set 'H3K27 bound': genes posessing the trimethylated H3K27 (H3K27me3) mark in their promoters in human embryonic stem cells as identified by ChIP on chip. www.broad.mit.e...
Broad TARTE_PLASMA_CELL_VS_PLASMABLAST_UP View Gene Set 4.184e-15 386 2.002e-12 5 Genes up-regulated in mature plasma cells compared with plasmablastic B lymphocytes. www.broad.mit.e...
Broad EBAUER_TARGETS_OF_PAX3_FOXO1_FUSION_UP View Gene Set 6.952e-13 201 2.772e-10 6 Genes up-regulated in Rh4 cells (alveolar rhabdomyosarcoma ARMS) after knockdown of the PAX3-FOXO1 [Gene iD=5077 2308] fusion protein by RNAi for 72 hr. www.broad.mit.e...
Broad HUTTMANN_B_CLL_POOR_SURVIVAL_UP View Gene Set 9.003e-12 268 3.077e-09 7 Up-regulated genes in B-CLL (B-cell chronic leukemia) patients expressing high levels of ZAP70 and CD38 [Gene ID=7535 952] which are associated with poor survival. www.broad.mit.e...
Broad XU_HGF_TARGETS_REPRESSED_BY_AKT1_DN View Gene Set 1.532e-11 75 4.581e-09 8 Genes down-regulated in DU-145 cells (prostate cancer) in the presence but not in the absence of a dominant negative form of AKT1 [Gene ID=207] upon exposure to HGF [Gene ID=3082] for 48 hr. www.broad.mit.e...
Broad BENPORATH_SUZ12_TARGETS View Gene Set 2.689e-11 1011 7.147e-09 9 Set 'Suz12 targets': genes identified by ChIP on chip as targets of the Polycomb protein SUZ12 [Gene ID=23512] in human embryonic stem cells. www.broad.mit.e...
Broad SMID_BREAST_CANCER_NORMAL_LIKE_UP View Gene Set 4.411e-11 459 1.035e-08 10 Genes up-regulated in the normal-like subtype of breast cancer. www.broad.mit.e...
Broad SATO_SILENCED_BY_METHYLATION_IN_PANCREATIC_CANCER_1 View Gene Set 4.76e-11 407 1.035e-08 10 Genes up-regulated in the pancreatic cancer cell lines (AsPC1 Hs766T MiaPaCa2 Panc1) but not in the non-neoplastic cells (HPDE) by decitabine (5-aza-2'-deoxycytidine) [PubChem=451668]. www.broad.mit.e...
Broad SMID_BREAST_CANCER_BASAL_DN View Gene Set 1.822e-10 664 3.632e-08 12 Genes down-regulated in basal subtype of breast cancer samles. www.broad.mit.e...
Broad THUM_SYSTOLIC_HEART_FAILURE_UP View Gene Set 7.41e-10 393 1.266e-07 13 Genes up-regulated in samples with systolic heart failure compared to normal hearts. www.broad.mit.e...
Broad SMID_BREAST_CANCER_LUMINAL_B_DN View Gene Set 7.377e-10 549 1.266e-07 13 Genes down-regulated in the luminal B subtype of breast cancer. www.broad.mit.e...
Broad SMID_BREAST_CANCER_ERBB2_UP View Gene Set 4.142e-09 138 6.606e-07 15 Genes up-regulated in the erbb2 subype of breast cancer samples characterized by higher expression of ERBB2 [Gene ID=2064]. www.broad.mit.e...
Broad RICKMAN_METASTASIS_DN View Gene Set 1.812e-08 246 2.71e-06 16 Genes down-regulated in metastatic vs non-metastatic HNSCC (head and neck squamous cell carcinoma) samples. www.broad.mit.e...
Broad MOREAUX_B_LYMPHOCYTE_MATURATION_BY_TACI_UP View Gene Set 2.647e-08 70 3.629e-06 17 Genes up-regulated in normal bone marrow plasma cells (BMPC) compared to polyclonal plasmablasts (PPC) that also distinguished multiple myeloma (MM) samples by expression of levels of TACI (TNFRSF13B) [Gene ID=23495]. www.broad.mit.e...
Broad CAIRO_HEPATOBLASTOMA_CLASSES_DN View Gene Set 2.731e-08 205 3.629e-06 17 Genes down-regulated in robust Cluster 2 (rC2) of hepatoblastoma samples compared to those in the robust Cluster 1 (rC1). www.broad.mit.e...
Broad WALLACE_PROSTATE_CANCER_RACE_UP View Gene Set 3.669e-08 288 4.619e-06 19 Genes up-regulated in prostate cancer samples from African-American patients compared to those from the European-American patients. www.broad.mit.e...
Broad LENAOUR_DENDRITIC_CELL_MATURATION_UP View Gene Set 3.959e-08 92 4.735e-06 20 Genes up-regulated during in vitro maturation of CD14+ [Gene ID=929] monocytes (day 0) into immature (day 7) and mature dendritic cells (day 14). www.broad.mit.e...
Broad DEURIG_T_CELL_PROLYMPHOCYTIC_LEUKEMIA_UP View Gene Set 5.38e-08 351 6.128e-06 21 Genes up-regulated in T-PLL cells (T-cell prolymphocytic leukemia) bearing the inv(14)/t(14:14) chromosomal aberration. www.broad.mit.e...
Broad SHEDDEN_LUNG_CANCER_GOOD_SURVIVAL_A12 View Gene Set 7.372e-08 296 8.015e-06 22 Cluster 12 of method A: up-regulation of these genes in patients with non-small cell lung cancer (NSCLC) predicts good survival outcome. www.broad.mit.e...
Broad CHARAFE_BREAST_CANCER_LUMINAL_VS_MESENCHYMAL_UP View Gene Set 1.82e-07 422 1.893e-05 23 Genes up-regulated in luminal-like breast cancer cell lines compared to the mesenchymal-like ones. www.broad.mit.e...
Broad WANG_BARRETTS_ESOPHAGUS_UP View Gene Set 2.366e-07 46 2.358e-05 24 Genes up-regulated in Barrett's esophagus compared to the normal tissue. www.broad.mit.e...
Broad ONDER_CDH1_TARGETS_2_DN View Gene Set 4.764e-07 453 4.558e-05 25 Genes down-regulated in HMLE cells (immortalized nontransformed mammary epithelium) after E-cadhedrin (CDH1) [Gene ID=999] knockdown by RNAi. www.broad.mit.e...
Broad SMID_BREAST_CANCER_RELAPSE_IN_BONE_DN View Gene Set 5.106e-07 306 4.698e-05 26 Genes down-regulated in bone relapse of breast cancer. www.broad.mit.e...
Broad PEREZ_TP63_TARGETS View Gene Set 6.713e-07 328 5.947e-05 27 Genes up-regulated in the HMEC cells (primary mammary epithelium) upon expression of the transcriptionally active isoform of TP63 [Gene ID=8626] off adenoviral vector. www.broad.mit.e...
Broad BENPORATH_PRC2_TARGETS View Gene Set 9.802e-07 636 8.374e-05 28 Set 'PRC2 targets': Polycomb Repression Complex 2 (PRC) targets; identified by ChIP on chip on human embryonic stem cells as genes that: posess the trimethylated H3K27 mark in their promoters and are bound by SUZ12 [Gene ID=23512] and EED [Gene ID=8726] Polycomb proteins. www.broad.mit.e...
Broad RODRIGUES_NTN1_TARGETS_DN View Gene Set 1.356e-06 151 0.0001081 29 Genes down-regulated in HCT8/S11 cells (colon cancer) engineered to stably express NTN1 [Gene ID=1630] off a plasmid vector. www.broad.mit.e...
Broad DELYS_THYROID_CANCER_UP View Gene Set 1.354e-06 397 0.0001081 29 Genes up-regulated in papillary thyroid carcinoma (PTC) compared to normal tissue. www.broad.mit.e...
Broad LEE_NEURAL_CREST_STEM_CELL_UP View Gene Set 1.441e-06 142 0.0001087 31 Genes up-regulated in the neural crest stem cells (NCS) defined as p75+/HNK1+ [Gene ID=4804 27087]. www.broad.mit.e...
Broad JAATINEN_HEMATOPOIETIC_STEM_CELL_DN View Gene Set 1.461e-06 215 0.0001087 31 Genes up-regulated in CD133+ [Gene ID=8842] cells (hematopoietic stem cells HSC) compared to the CD133- cells. www.broad.mit.e...
Broad PEREZ_TP53_TARGETS View Gene Set 1.5e-06 1066 0.0001087 31 Genes up-regulated in the HMEC cells (primary mammary epithelium) upon expression of TP53 [Gene ID=7157] off adenoviral vector. www.broad.mit.e...
Broad LINDGREN_BLADDER_CANCER_CLUSTER_2B View Gene Set 2.033e-06 384 0.0001431 34 Genes specifically up-regulated in Cluster IIb of urothelial cell carcinom (UCC) tumors. www.broad.mit.e...
Broad VERHAAK_AML_WITH_NPM1_MUTATED_DN View Gene Set 2.241e-06 241 0.0001501 35 Genes down-regulated in acute myeloid leukemia (AML) patients with mutated NPM1 [Gene ID=4869]. www.broad.mit.e...
Broad SENGUPTA_EBNA1_ANTICORRELATED View Gene Set 2.259e-06 156 0.0001501 35 Genes whose reduced expression in nasopharyngeal carinoma (NPC) correlated most with the increased expression of EBNA1 [Gene ID=3783774] a latent gene of Epstein-Barr virus (EBV). www.broad.mit.e...
Broad COLIN_PILOCYTIC_ASTROCYTOMA_VS_GLIOBLASTOMA_UP View Gene Set 2.819e-06 34 0.0001822 37 Genes up-regulated in pilocytic astrocytoma compared to glioblastoma samples. www.broad.mit.e...
Broad DOANE_RESPONSE_TO_ANDROGEN_UP View Gene Set 3.815e-06 175 0.000234 38 Genes up-regulated in MDA-MB-453 cells (class A ER(-) [Gene ID=2099] breast cancer) after exposure to the androgen R1881 [PubChem=13766]. www.broad.mit.e...
Broad VERRECCHIA_RESPONSE_TO_TGFB1_C5 View Gene Set 3.72e-06 20 0.000234 38 Cluster 5: ECM related genes up-regulated in dermal fibroblasts later than 30 min after TGFB1 [Gene ID=7040] addition; decreased slowly after the peak at 120 min time point. www.broad.mit.e...
Broad RODWELL_AGING_KIDNEY_UP View Gene Set 6.024e-06 326 0.0003602 40 Genes whose expression increases with age in normal kidney. www.broad.mit.e...
Broad SCHLOSSER_SERUM_RESPONSE_UP View Gene Set 7.272e-06 131 0.0004242 41 Cluster 1: genes up-regulated in B493-6 cells (B lymphocytes) upon serum stimulation but not by affected by MYC [Gene ID=4609]. www.broad.mit.e...
Broad GARY_CD5_TARGETS_UP View Gene Set 8.37e-06 463 0.0004767 42 Genes up-regulated in Daudi cells (B lymphocytes) stably expressing CD5 [Gene ID=921] off a plasmid vector. www.broad.mit.e...
Broad JIANG_TIP30_TARGETS_DN View Gene Set 9.88e-06 23 0.0005496 43 Down-regulated genes in HepG2 cells (liver cancer) overexpressing an oncogenic variant of tumor suppressor TIP30 [Gene ID=10553] compared to its wild type form. www.broad.mit.e...
Broad KOBAYASHI_EGFR_SIGNALING_24HR_UP View Gene Set 1.217e-05 96 0.0006616 44 Genes up-regulated in H1975 cells (non-small cell lung cancer NSCLC) resistant to gefitinib [PubChem=123631] after treatment with EGFR inhibitor CL-387785 [PubChem=2776] for 24h. www.broad.mit.e...
Broad KAAB_HEART_ATRIUM_VS_VENTRICLE_UP View Gene Set 1.285e-05 239 0.0006829 45 Genes up-regulated in the atria of healthy hearts compared to venticles. www.broad.mit.e...
Broad ODONNELL_METASTASIS_UP View Gene Set 1.51e-05 77 0.0007852 46 Up-regulated genes in the signature set for lymph node metastasis in head and neck squamous cell carcinoma (HNSCC). www.broad.mit.e...
Broad VART_KSHV_INFECTION_ANGIOGENIC_MARKERS_UP View Gene Set 1.99e-05 163 0.001013 47 Angiogenic markers up-regulated in lymph endothelial cells upon infection with KSHV (Kaposi's sarcoma herpes virus). www.broad.mit.e...
Broad KINSEY_TARGETS_OF_EWSR1_FLII_FUSION_DN View Gene Set 2.091e-05 306 0.001042 48 Genes down-regulated in TC71 and EWS502 cells (Ewing's sarcoma) upon knockdown of the EWSR1-FLII fusion [Gene ID=2130 2314]. www.broad.mit.e...
Broad BERENJENO_TRANSFORMED_BY_RHOA_DN View Gene Set 2.181e-05 353 0.001065 49 Genes down-regulated in NIH3T3 cells (fibroblasts) transformed by expression of contitutively active (Q63L) form of RHOA [Gene ID=387] off plasmid vector. www.broad.mit.e...
Broad RAMALHO_STEMNESS_DN View Gene Set 2.276e-05 68 0.001089 50 Genes depleted in embryonic neural and hematopoietic stem cells. www.broad.mit.e...
Broad FULCHER_INFLAMMATORY_RESPONSE_LECTIN_VS_LPS_DN View Gene Set 2.857e-05 431 0.00134 51 Genes down-regulated in monocyte-derived dendritic cells (MDDC) after stimulation with galecin-1 (lectin LGALS1) [Gene ID=3956] compared to that with bacterial lipopolysaccharide (LPS). www.broad.mit.e...
Broad WU_ALZHEIMER_DISEASE_DN View Gene Set 2.937e-05 14 0.001351 52 Genes down-regulated in brain endothelial cells from patients with Alzheimer disease. www.broad.mit.e...
Broad XU_GH1_EXOGENOUS_TARGETS_UP View Gene Set 3.096e-05 48 0.001397 53 Genes up-regulated in MFCF-7 cells (breast cancer) by exogenous HG1 [Gene ID=2688]. www.broad.mit.e...
Broad RICKMAN_HEAD_AND_NECK_CANCER_D View Gene Set 3.826e-05 36 0.001695 54 Cluster d: genes identifying an intrinsic group in head and neck squamous cell carcinoma (HNSCC). www.broad.mit.e...
Broad HOOI_ST7_TARGETS_DN View Gene Set 3.931e-05 108 0.00171 55 Genes down-regulated in PC-3 cells (prostate cancer) stably expressing ST7 [Gene ID=7982] off a plasmid vector. www.broad.mit.e...
Broad CREIGHTON_AKT1_SIGNALING_VIA_MTOR_UP View Gene Set 4.091e-05 34 0.001747 56 Genes in the AKT1 [Gene ID=207] pathway which are independent of MTOR [Gene ID=2475] insensitive to RAD001 (everolimus) [PubChem=6442177]. www.broad.mit.e...
Broad FLECHNER_BIOPSY_KIDNEY_TRANSPLANT_REJECTED_VS_OK_UP View Gene Set 4.43e-05 86 0.001859 57 Genes differentially expressed in kidney biopsies from patients with acute transplant rejection compared to the biopsies from patients with well functioning kidneys more than 1-year post transplant. www.broad.mit.e...
Broad BENPORATH_EED_TARGETS View Gene Set 5.428e-05 1033 0.002201 58 Set 'Eed targets': genes identified by ChIP on chip as targets of the Polycomb protein EED [Gene ID=8726] in human embryonic stem cells. www.broad.mit.e...
Broad KIM_LRRC3B_TARGETS View Gene Set 5.363e-05 30 0.002201 58 Immune response genes up-regulated in zenograft tumors formed by SNU-601 cells (gastric cancer) made to express LRRC3B [Gene ID=116135]. www.broad.mit.e...
Broad CHANG_IMMORTALIZED_BY_HPV31_DN View Gene Set 6.215e-05 47 0.002478 60 Genes down-regulated in normal keratinocytes immortalized by infection with the high risk HPV31 (human papilloma virus) strain. www.broad.mit.e...
Broad RUIZ_TNC_TARGETS_UP View Gene Set 6.619e-05 145 0.002595 61 Genes up-regulated in T98G cells (glioblastoma) by TNC [Gene ID=3371]. www.broad.mit.e...
Broad LE_EGR2_TARGETS_DN View Gene Set 8.036e-05 100 0.0031 62 Genes down-regulated in P14 nerves of transgenic mice having hypomorhic (reduced function) allele of EGR2 [Gene ID=1959]. www.broad.mit.e...
Broad SABATES_COLORECTAL_ADENOMA_DN View Gene Set 8.264e-05 276 0.003138 63 Genes down-regulated in colorectal adenoma compared to normal mucosa samples. www.broad.mit.e...
Broad GOZGIT_ESR1_TARGETS_DN View Gene Set 9.302e-05 710 0.003477 64 Genes down-regulated in TMX2-28 cells (breast cancer) which do not express ESR1 [Gene ID=2099]) compared to the parental MCF7 cells which do. www.broad.mit.e...
Broad BOYLAN_MULTIPLE_MYELOMA_PCA1_UP View Gene Set 0.0001058 80 0.003895 65 Top up-regulated genes from principal component 1 (PCA1) which captures variation between normal plasma cells and tumors arising from aberrant expression of BCL2L1 and MYC [Gene ID=598 4609]. www.broad.mit.e...
Broad LEI_MYB_TARGETS View Gene Set 0.0001101 13 0.00399 66 Myb-regulated genes in MCF7 (breast cancer) and lung epithelial cell lines overexpressing MYBL2 MYBL1 or MYB [Gene ID=4605 4603 4602]. www.broad.mit.e...
Broad BANDRES_RESPONSE_TO_CARMUSTIN_MGMT_48HR_DN View Gene Set 0.0001169 138 0.004175 67 Genes down-regulated in T98G cells (glioma express MGMT [Gene ID=4255]) by carmustine [PubChem=2578] at 48 h. www.broad.mit.e...
Broad REN_ALVEOLAR_RHABDOMYOSARCOMA_UP View Gene Set 0.0001187 95 0.004175 68 Genes commonly up-regulated in human alveolar rhabdomyosarcoma (ARMS) and its mouse model overexpressing PAX3-FOXO1 [Gene ID=5077 2308] fusion. www.broad.mit.e...
Broad HATADA_METHYLATED_IN_LUNG_CANCER_UP View Gene Set 0.0001314 355 0.004539 69 Genes with hypermethylated DNA in lung cancer samples. www.broad.mit.e...
Broad KUMAR_TARGETS_OF_MLL_AF9_FUSION View Gene Set 0.0001328 370 0.004539 69 Myeloid leukemia model in mice with germ-line MLL-AF9 fusion knock-in [Gene ID=4297 4300]: genes changed in comparison among the leukemic preleukemic and wild-type animals. www.broad.mit.e...
Broad LIU_PROSTATE_CANCER_DN View Gene Set 0.0001377 446 0.004638 71 Genes down-regulated in prostate cancer samples. www.broad.mit.e...
Broad BARRIER_COLON_CANCER_RECURRENCE_DN View Gene Set 0.0001669 19 0.005351 72 Down-regulated genes from the 70-gene prognosis predictor for stage 2 colon cancer based on non-neoplastic mucosa gene expression profiles. www.broad.mit.e...
Broad FARMER_BREAST_CANCER_CLUSTER_1 View Gene Set 0.000169 44 0.005351 72 Cluster 1: interferon T and B lymphocyte genes clustered together across breast cancer samples. www.broad.mit.e...
Broad WEST_ADRENOCORTICAL_TUMOR_DN View Gene Set 0.00017 531 0.005351 72 Down-regulated genes in pediatric adrenocortical tumors (ACT) compared to the normal tissue. www.broad.mit.e...
Broad BROWNE_HCMV_INFECTION_30MIN_UP View Gene Set 0.0001698 53 0.005351 72 Genes up-regulated in primary fibroblast cell culture at 30 min time point after infection with HCMV (AD169 strain). www.broad.mit.e...
Broad DEBIASI_APOPTOSIS_BY_REOVIRUS_INFECTION_DN View Gene Set 0.0001612 224 0.005351 72 Genes down-regulated in HEK293 cells (embryonic kidney) at 6 h 12 h or 24 h after infection with reovirus strain T3A (known as a strong inducer of apoptosis). www.broad.mit.e...
Broad NAKAYAMA_SOFT_TISSUE_TUMORS_PCA1_UP View Gene Set 0.0001752 74 0.005376 77 Top 100 probe sets contrubuting to the positive side of the 1st principal component; predominantly associated with spindle cell and pleomorphic sarcoma samples. www.broad.mit.e...
Broad HENDRICKS_SMARCA4_TARGETS_UP View Gene Set 0.0001753 49 0.005376 77 Genes up-regulated in ALAB cells (breast cancer) upon reintroduction of SMARCA4 [Gene ID=6597] expressed off adenoviral vector. www.broad.mit.e...
Broad VERRECCHIA_EARLY_RESPONSE_TO_TGFB1 View Gene Set 0.0001814 51 0.005491 79 ECM related genes up-regulated early (within 30 min) in dermal fibroblasts after addition of TGFB1 [Gene ID=7040]. www.broad.mit.e...
Broad HELLER_HDAC_TARGETS_UP View Gene Set 0.0001884 268 0.005634 80 Genes up-regulated in at least one of three multiple myeloma (MM) cell lines by TSA [PubChem=5562]. www.broad.mit.e...
Broad MULLIGHAN_MLL_SIGNATURE_1_DN View Gene Set 0.0002032 228 0.006001 81 The 'MLL signature 1': genes down-regulated in pediatric AML (acute myeloid leukemia) with rearranged MLL [Gene ID=4297] compared to all AML cases with the intact gene. www.broad.mit.e...
Broad TONKS_TARGETS_OF_RUNX1_RUNX1T1_FUSION_HSC_UP View Gene Set 0.0002089 182 0.006093 82 Genes up-regulated in normal hematopoietic progenitors by RUNX1-RUNX1T1 [Gene ID=861 862] fusion. www.broad.mit.e...
Broad LEE_LIVER_CANCER_SURVIVAL_UP View Gene Set 0.0002124 130 0.006122 83 Genes highly expressed in hepatocellular carcinoma with good survival. www.broad.mit.e...
Broad TONKS_TARGETS_OF_RUNX1_RUNX1T1_FUSION_HSC_DN View Gene Set 0.000229 184 0.00643 84 Genes down-regulated in normal hematopoietic progenitors by RUNX1-RUNX1T1 [Gene ID=861 862] fusion. www.broad.mit.e...
Broad HAHTOLA_SEZARY_SYNDROM_DN View Gene Set 0.0002295 42 0.00643 84 Genes down-regulated in monocytes isolated from peripheral blood samples of Sezary syndrom patients compared to those from healthy normal donors. www.broad.mit.e...
Broad KAYO_AGING_MUSCLE_UP View Gene Set 0.0002312 194 0.00643 84 Upregulated in the vastus lateralis muscle of aged vs young adult rhesus monkeys www.broad.mit.e...
Broad LEE_DIFFERENTIATING_T_LYMPHOCYTE View Gene Set 0.0002388 129 0.006566 87 Genes enriched at every T lymphocyte differentiation stage compared to the early passage fetal thymic stromal cultures (TSC). www.broad.mit.e...
Broad HESS_TARGETS_OF_HOXA9_AND_MEIS1_DN View Gene Set 0.0002534 70 0.006887 88 Genes down-regulated in hematopoietic precursor cells conditionally expressing HOXA9 and MEIS1 [Gene ID=3205 4211]. www.broad.mit.e...
Broad KIM_GASTRIC_CANCER_CHEMOSENSITIVITY View Gene Set 0.0002703 97 0.007264 89 Genes up-regulated in gastric cancer patients refractory to chemotherapy treatment with 5-fluorouracil and cisplatin [PubChem=3385 2767] compared to the sensitive state. www.broad.mit.e...
Broad VECCHI_GASTRIC_CANCER_EARLY_DN View Gene Set 0.0002891 346 0.007683 90 Down-regulated genes distinguishing between early gastric cancer (EGC) and normal tissue samples. www.broad.mit.e...
Broad VART_KSHV_INFECTION_ANGIOGENIC_MARKERS_DN View Gene Set 0.0003154 134 0.008291 91 Angiogenic markers down-regulated in lymph endothelial cells upon infection with KSHV (Kaposi's sarcoma herpes virus). www.broad.mit.e...
Broad SANA_RESPONSE_TO_IFNG_UP View Gene Set 0.000319 68 0.008293 92 Genes up-regulated in five primary endothelial cell types (lung aortic iliac dermal and colon) by IFNG [Gene ID=3458]. www.broad.mit.e...
Broad TAKEDA_TARGETS_OF_NUP98_HOXA9_FUSION_16D_UP View Gene Set 0.0003273 168 0.008419 93 Genes up-regulated in CD34+ [Gene ID=947] hematopoetic cells by expression of NUP98-HOXA9 fusion [Gene ID=4928 3205] off a retroviral vector at 16 days after transduction. www.broad.mit.e...
Broad TONKS_TARGETS_OF_RUNX1_RUNX1T1_FUSION_GRANULOCYTE_UP View Gene Set 0.0003343 52 0.008506 94 Genes up-regulated in granulocytes by RUNX1-RUNX1T1 [Gene ID=861 862] fusion. www.broad.mit.e...
Broad ODONNELL_TARGETS_OF_MYC_AND_TFRC_UP View Gene Set 0.0003386 78 0.008527 95 Genes up-regulated in P493-6 cells (B lymphocyte) by MYC [Gene ID=4609] and down-regulated by RNAi knockdown of TFRC [Gene ID=7037]. www.broad.mit.e...
Broad KANG_IMMORTALIZED_BY_TERT_DN View Gene Set 0.0004141 102 0.01011 96 Down-regulated genes in the signature of adipose stromal cells (ADSC) immortalized by forced expression of telomerase (TERT) [Gene ID=7015]. www.broad.mit.e...
Broad RIGGINS_TAMOXIFEN_RESISTANCE_UP View Gene Set 0.0004076 65 0.01011 96 Genes up-regulated SUM44/LCCTam cells (breast cancer) resistant to 4-hydroxytamoxifen [PubChem=63062] relative to the parental SUM44 cells sensitive to the drug. www.broad.mit.e...
Broad ICHIBA_GRAFT_VERSUS_HOST_DISEASE_D7_UP View Gene Set 0.0004106 93 0.01011 96 Hepatic graft versus host disease (GVHD) day 7: up-regulated in allogeneic vs syngeneic bone marrow transplant. www.broad.mit.e...
Broad KIM_MYCL1_AMPLIFICATION_TARGETS_UP View Gene Set 0.0004231 11 0.01022 99 Genes positively correlated with amplifications of MYCL1 [Gene ID=4610] in SCLC (small cell lung cancer) cell lines. www.broad.mit.e...
Broad SMID_BREAST_CANCER_LUMINAL_B_UP View Gene Set 0.000475 162 0.01136 100 Genes up-regulated in the luminal B subtype of breast cancer. www.broad.mit.e...
Broad YAGI_AML_WITH_T_8_21_TRANSLOCATION View Gene Set 0.0004868 358 0.01153 101 Genes specifically expressed in samples from patients with pediatric AML (acute myeloid leukemia ) bearing t(8;21) translocation. www.broad.mit.e...
Broad PEREZ_TP53_AND_TP63_TARGETS View Gene Set 0.0004921 187 0.01154 102 Genes up-regulated in HMEC cells (primary mammary epithelium) upon expression of both of TP53 [Gene ID=7157] and the transcriptionally active isoform of TP63 [Gene ID=8626] off adenoviral vectors. www.broad.mit.e...
Broad ZHOU_INFLAMMATORY_RESPONSE_FIMA_UP View Gene Set 0.0005284 502 0.01227 103 Genes up-regulated in macrophages by P.gingivalis FimA pathogen. www.broad.mit.e...
Broad CADWELL_ATG16L1_TARGETS_UP View Gene Set 0.0005444 83 0.01252 104 Genes up-regulated in Paneth cell (part of intestiinal epithelium) of mice with hypomorphic (reduced function) form of ATG16L1 [Gene ID=55054]. www.broad.mit.e...
Broad FERRANDO_T_ALL_WITH_MLL_ENL_FUSION_UP View Gene Set 0.0005638 76 0.01272 105 Top 100 genes positively (UP) and negatively (DN) associated with T-cell acute lymphoblastic leukemia MLL T-ALL) expressing MLL-ENL fusion [Gene ID=4297 4298]. www.broad.mit.e...
Broad PARK_TRETINOIN_RESPONSE View Gene Set 0.0005606 10 0.01272 105 Genes up-regulated in U937 cells (acute promyelocytic leukemia APL) by tretinoin (all-trans retinoic acid ATRA) [PubChem=5538]. www.broad.mit.e...
Broad HAMAI_APOPTOSIS_VIA_TRAIL_DN View Gene Set 0.0005794 125 0.01295 107 Genes down-regulated in T1 cells (primary melanoma sensitive to TRAIL [Gene ID=8743]) compared to G1 cells (metastatic melanoma resistant to TRAIL). www.broad.mit.e...
Broad VALK_AML_CLUSTER_8 View Gene Set 0.0005995 23 0.01328 108 Top 40 genes from cluster 8 of aculte myeloid leukemia (AML) expression profile; 69% of the samples are FAB M2 subtype. www.broad.mit.e...
Broad BOYAULT_LIVER_CANCER_SUBCLASS_G3_DN View Gene Set 0.0006167 51 0.01353 109 Down-regulated genes in hepatocellular carcinoma (HCC) subclass G3 defined by unsupervised clustering. www.broad.mit.e...
Broad ICHIBA_GRAFT_VERSUS_HOST_DISEASE_35D_UP View Gene Set 0.0006458 121 0.01404 110 Hepatic graft versus host disease (GVHD) day 35: genes up-regulated in allogeneic vs syngeneic bone marrow transplant. www.broad.mit.e...
Broad WANG_ESOPHAGUS_CANCER_VS_NORMAL_UP View Gene Set 0.0006661 110 0.0141 111 Genes specific to esophageal adenocarcinoma (EAC) relative to normal tissue. www.broad.mit.e...
Broad LEE_TARGETS_OF_PTCH1_AND_SUFU_UP View Gene Set 0.000659 77 0.0141 111 Genes up-regulated in medulloblastoma tumors from animals with inactivating mutations of one copy of PTCH1 or SUFU [Gene ID=5727 51684] in conjunction with TP53 [Gene ID=7157] loss. www.broad.mit.e...
Broad GALE_APL_WITH_FLT3_MUTATED_DN View Gene Set 0.0006651 17 0.0141 111 Genes down-regulated in acute promyelocytic leukemia (APL) patients with mutated FLT3 [Gene ID=2322]. www.broad.mit.e...
Broad BROWNE_INTERFERON_RESPONSIVE_GENES View Gene Set 0.0006863 67 0.01428 114 Genes up-regulated in primary fibroblast culture after treatment with interferon alpha for 6 h. www.broad.mit.e...
Broad YU_MYC_TARGETS_DN View Gene Set 0.0006805 44 0.01428 114 Genes down-regulated in B cell lymphoma tumors expressing an activated form of MYC [Gene ID=4609]. www.broad.mit.e...
Broad WINTER_HYPOXIA_DN View Gene Set 0.000766 46 0.01579 116 Genes down-regulated in head and neck tumor samples which clustered around known hypoxia genes. www.broad.mit.e...
Broad VALK_AML_CLUSTER_7 View Gene Set 0.0007721 26 0.01579 116 Top 40 genes from cluster 7 of acute myeloid leukemia (AML) expression profile; 61% of the samples are FAB M1 or M2 subtype. www.broad.mit.e...
Broad LEE_DOUBLE_POLAR_THYMOCYTE View Gene Set 0.0007858 17 0.01593 118 Genes enriched in the double polar (DP) thymocyte compared to all other T lymphocyte differentiation stages. www.broad.mit.e...
Broad NAKAYAMA_SOFT_TISSUE_TUMORS_PCA2_DN View Gene Set 0.0007982 78 0.01604 119 Top 100 probe sets contrubuting to the negative side of the 2nd principal component; associated with adipocytic differentiation. www.broad.mit.e...
Broad JAEGER_METASTASIS_DN View Gene Set 0.0008102 252 0.01615 120 Genes down-regulated in metastases from malignant melanoma compared to the primary tumors. www.broad.mit.e...
Broad WU_SILENCED_BY_METHYLATION_IN_BLADDER_CANCER View Gene Set 0.0008178 43 0.01617 121 Genes silenced by DNA methylation in bladder cancer cell lines. www.broad.mit.e...
Broad CHIBA_RESPONSE_TO_TSA_UP View Gene Set 0.0008363 43 0.0164 122 Cancer related genes up-regulated in any of four hepatoma cell lines following 24 h treatment with TSA [PubChem=5562]. www.broad.mit.e...
Broad LIEN_BREAST_CARCINOMA_METAPLASTIC_VS_DUCTAL_DN View Gene Set 0.0009673 104 0.01866 123 Genes down-regulated between two breast carcinoma subtypes: metaplastic (MCB) and ductal (DCB). www.broad.mit.e...
Broad HELLER_HDAC_TARGETS_SILENCED_BY_METHYLATION_UP View Gene Set 0.000963 399 0.01866 123 Genes up-regulated in multiple myeloma (MM) cell lines treated with both decitabine [PubChem=451668] TSA [PubChem=5562]. www.broad.mit.e...
Broad STEARMAN_TUMOR_FIELD_EFFECT_UP View Gene Set 0.0009953 33 0.01905 125 Up-regulated genes in the 'Field Effect' signature of normal lung tissue adjacent to the tumor. www.broad.mit.e...
Broad RICKMAN_HEAD_AND_NECK_CANCER_A View Gene Set 0.001069 91 0.02029 126 Cluster a: genes identifying an intrinsic group in head and neck squamous cell carcinoma (HNSCC). www.broad.mit.e...
Broad SAKAI_CHRONIC_HEPATITIS_VS_LIVER_CANCER_DN View Gene Set 0.001101 35 0.02074 127 Selected genes down-regulated in peripheral blood monocytes (PBMC) of patients with hepatocellular carcinoma (HCC) compared to those with chronic hepatitis. www.broad.mit.e...
Broad IZADPANAH_STEM_CELL_ADIPOSE_VS_BONE_DN View Gene Set 0.001137 104 0.02125 128 Genes down-regulated in adipose tissue mesenchymal stem cells (ASC) vs bone marrow mesenchymal stem cells (rBMSC) www.broad.mit.e...
Broad URS_ADIPOCYTE_DIFFERENTIATION_DN View Gene Set 0.001217 30 0.02256 129 Genes down-regulated in primary adipocytes compared to preadipocytes. www.broad.mit.e...
Broad TAKEDA_TARGETS_OF_NUP98_HOXA9_FUSION_10D_UP View Gene Set 0.001269 186 0.023 130 Genes up-regulated in CD34+ [Gene ID=947] hematopoetic cells by expression of NUP98-HOXA9 fusion [Gene ID=4928 3205] off a retroviral vector at 10 days after transduction. www.broad.mit.e...
Broad YAGI_AML_FAB_MARKERS View Gene Set 0.001266 189 0.023 130 Genes specifically expressed in FAB subtypes M2 M4 M5 and M7 of pediatric AML (acute myeloid leukemia). www.broad.mit.e...
Broad YAO_TEMPORAL_RESPONSE_TO_PROGESTERONE_CLUSTER_16 View Gene Set 0.001259 75 0.023 130 Genes co-regulated in uterus during a time course response to progesterone [PubChem=5994]: SOM cluster 16. www.broad.mit.e...
Broad ROSS_AML_WITH_PML_RARA_FUSION View Gene Set 0.001289 74 0.02312 133 Top 100 probe sets for pediatric acute myeloid leukemia (AML) subtype t(15;17): has PML RARA fusion [Gene ID=5371 5914]. www.broad.mit.e...
Broad TAVAZOIE_METASTASIS View Gene Set 0.001295 103 0.02312 133 Putative metastasis genes: up-regulated in metastatic cell lines LM2 (lung) and BoM2 (bone) relative to the parental MDA-MB-231 line (breast adenocarcinoma). www.broad.mit.e...
Broad HANN_RESISTANCE_TO_BCL2_INHIBITOR_UP View Gene Set 0.001347 34 0.02379 135 Genes up-regulated in SCLC (small cell lung cancer) cells with acquired resistance to ABT-737 [PubChem=11228183] an inhibitor of the BCL2 [Gene ID=596] family proteins. www.broad.mit.e...
Broad BOYLAN_MULTIPLE_MYELOMA_D_DN View Gene Set 0.001353 71 0.02379 135 Genes down-regulated in group D of tumors arising from overexpression of BCL2L1 and MYC [Gene ID=598 4609] in plasma cells. www.broad.mit.e...
Broad WINNEPENNINCKX_MELANOMA_METASTASIS_DN View Gene Set 0.001393 46 0.02432 137 Genes from the 254-gene classifier which were down-regulated in melanoma patients with a reported distant metastasis within 4 years. www.broad.mit.e...
Broad COLDREN_GEFITINIB_RESISTANCE_DN View Gene Set 0.001432 217 0.02482 138 Genes down-regulated in NSCLC (non-small cell lung carcinoma) cell lines resistant to gefitinib [PubChem=123631] compared to the sensitive ones. www.broad.mit.e...
Broad VERRECCHIA_RESPONSE_TO_TGFB1_C2 View Gene Set 0.001456 19 0.02505 139 Cluster 2: ECM related genes up-regulated in dermal fibroblasts within 30 min after TGFB1 [Gene ID=7040] addition; reached a plateau after that. www.broad.mit.e...
Broad ZHOU_INFLAMMATORY_RESPONSE_LPS_UP View Gene Set 0.0015 400 0.02553 140 Genes up-regulated in macrophages by P.gingivalis LPS (lipopolysaccharide). www.broad.mit.e...
Broad ROSS_AML_OF_FAB_M7_TYPE View Gene Set 0.001505 67 0.02553 140 Top 100 probe sets for pediatric acute myeloid leukemia (AML) subtype FAB M7 (also known as acute megakaryoblastic leukemia AMKL). www.broad.mit.e...
Broad NUTT_GBM_VS_AO_GLIOMA_UP View Gene Set 0.001649 45 0.02777 142 Top 50 marker genes for glioblastoma multiforme (GBM) a class of high grade glioma. www.broad.mit.e...
Broad ROSS_AML_WITH_AML1_ETO_FUSION View Gene Set 0.001682 73 0.02813 143 Top 100 probe sets for pediatric acute myeloid leukemia (AML) subtype t(8;21) ; has AML1 ETO fusion [Gene ID=861 862]. www.broad.mit.e...
Broad KLEIN_PRIMARY_EFFUSION_LYMPHOMA_DN View Gene Set 0.001697 56 0.0282 144 Genes down-regulated in AIDS-related primary effusion lymphoma (PEL) samples compared to other tumor subtypes and normal B lymphocytes. www.broad.mit.e...
Broad KLEIN_TARGETS_OF_BCR_ABL1_FUSION View Gene Set 0.001865 31 0.03056 145 Genes changed in pre-B lymphoblastic leukemia cells with BCR-ABL1 fusion [Gene ID=613 25] vs normal pre-B lymphocytes. www.broad.mit.e...
Broad YAO_TEMPORAL_RESPONSE_TO_PROGESTERONE_CLUSTER_0 View Gene Set 0.001858 69 0.03056 145 Genes co-regulated in uterus during a time course response to progesterone [PubChem=5994]: SOM cluster 0. www.broad.mit.e...
Broad JAZAG_TGFB1_SIGNALING_VIA_SMAD4_DN View Gene Set 0.001881 64 0.03061 147 Genes down-regulated in PANC-1-S4KD cells (pancreatic cancer; SMAD4 [Gene ID=4089] knocked down by RNAi) after stimulation by TGF1B [Gene ID=7040] for 2 h. www.broad.mit.e...
Broad DACOSTA_UV_RESPONSE_VIA_ERCC3_TTD_UP View Gene Set 0.001899 47 0.03069 148 Genes exclusively up-regulated in fibroblasts expressing the TTD mutant form of ERCC3 [Gene ID=2071] after UVC irradiation. www.broad.mit.e...
Broad MCLACHLAN_DENTAL_CARIES_DN View Gene Set 0.001928 234 0.03096 149 Genes down-regulated in pulpal tissue extracted from carious teeth. www.broad.mit.e...
Broad BROWNE_HCMV_INFECTION_18HR_DN View Gene Set 0.001944 171 0.031 150 Genes down-regulated in primary fibroblast cell culture after infection with HCMV (AD169 strain) at 18 h time point that were not down-regulated at the previous time point 16 h. www.broad.mit.e...
Broad SENESE_HDAC1_TARGETS_DN View Gene Set 0.001972 235 0.03103 151 Genes down-regulated in U2OS cells (osteosarcoma) upon knockdown of HDAC1 [Gene ID=3065] by RNAi. www.broad.mit.e...
Broad MARKEY_RB1_ACUTE_LOF_UP View Gene Set 0.00197 202 0.03103 151 Genes up-regulated in adult fibroblasts with inactivated RB1 [Gene ID=5925] by Cre-lox: acute loss of function (LOF) of RB1. www.broad.mit.e...
Broad BOYLAN_MULTIPLE_MYELOMA_C_D_DN View Gene Set 0.001997 232 0.03123 153 Genes down-regulated both in group C and D of tumors arising from overexpression of BCL2L1 and MYC [Gene ID=598 4609] in plasma cells. www.broad.mit.e...
Broad GAUSSMANN_MLL_AF4_FUSION_TARGETS_G_UP View Gene Set 0.002037 157 0.03148 154 Up-regulated genes from the set G (Fig. 5a): specific to cells expressing both MLL-AF4 [Gene ID=4297 4299] and AF4-MLL fusion proteins. www.broad.mit.e...
Broad CAIRO_LIVER_DEVELOPMENT_DN View Gene Set 0.00204 208 0.03148 154 Genes down-regulated at early fetal liver stage (embryonic days E11.5 - E12.5) compared to the late fetal liver stage (embryonic days E14.5 - E16.5). www.broad.mit.e...
Broad GAUSSMANN_MLL_AF4_FUSION_TARGETS_D_UP View Gene Set 0.002085 30 0.03197 156 Up-regulated genes from the set D (Fig. 5a): specific signature shared by cells expressing MLL-AF4 [Gene ID=4297 4299] alone and those expressing both MLL-AF4 and AF4-MLL fusion proteins. www.broad.mit.e...
Broad POOLA_INVASIVE_BREAST_CANCER_DN View Gene Set 0.00212 130 0.03229 157 Genes down-regulated in atypical ductal hyperplastic tissues from patients with (ADHC) breast cancer vs those without the cancer (ADH). www.broad.mit.e...
Broad LIU_VAV3_PROSTATE_CARCINOGENESIS_UP View Gene Set 0.002157 89 0.03232 158 Selected genes up-regulated in prostate tumors developed by transgenic mice overexpressing VAV3 [Gene ID=10451] in prostate epithelium. www.broad.mit.e...
Broad GUTIERREZ_CHRONIC_LYMPHOCYTIC_LEUKEMIA_UP View Gene Set 0.002155 12 0.03232 158 Genes exclusively up-regulated in B lymphocytes from CLL (chronic lymphocytic leukemia) patients but with a similiar expression pattern in the normal cells and in the cells from WM (Waldenstroem's macroblobulinemia) patients. www.broad.mit.e...
Broad MCCLUNG_DELTA_FOSB_TARGETS_8WK View Gene Set 0.002162 44 0.03232 158 Genes up-regulated in the nucleus accumbens (a major reward center in brain) 8 weeks after induction of deltaFosB a FOSB [Gene ID=2354] splice variant. www.broad.mit.e...
Broad VALK_AML_CLUSTER_9 View Gene Set 0.002266 35 0.03366 161 Top 40 genes from cluster 9 of acute myeloid leukemia (AML) expression profile; 87% of the samples are FAB M4 or M5 subtype all have inv(16) inversion producing the CBFB-MYH11 fusion [Gene ID=865 4629]; indicate good survival. www.broad.mit.e...
Broad CHIARADONNA_NEOPLASTIC_TRANSFORMATION_CDC25_DN View Gene Set 0.00229 140 0.03382 162 Genes down-regulated in reverted NIH3T3 cells (fibroblasts transformed by activated KRAS [Gene ID=3845] which then reverted to normal cells upon stable over-expression of a dominant negative form of CDC25 [Gene ID=5923]) vs normal fibroblasts. www.broad.mit.e...
Broad MORI_LARGE_PRE_BII_LYMPHOCYTE_DN View Gene Set 0.002322 45 0.03387 163 Down-regulated genes in the B lymphocyte developmental signature based on expression profiling of lymphomas from the Emu-myc transgenic mice: the Large Pre-BII stage. www.broad.mit.e...
Broad STOSSI_RESPONSE_TO_ESTRADIOL View Gene Set 0.002311 37 0.03387 163 Genes up-regulated by estradiol (E2) [PubChem=5757] in U2OS cells (osteosarcoma) expressing ESR1 or ESR2 [[Gene ID = 2099 2100]. www.broad.mit.e...
Broad FONTAINE_PAPILLARY_THYROID_CARCINOMA_DN View Gene Set 0.002391 68 0.03467 165 Genes down-regulated in papillary thyroid carcinoma (PTC) compared to other thyroid tumors. www.broad.mit.e...
Broad MILI_PSEUDOPODIA_CHEMOTAXIS_DN View Gene Set 0.002418 430 0.03485 166 Transcripts depleted in pseudopodia of NIH/3T3 cells (fibroblast) in response to the chemotactic migration stimulus by lysophosphatidic acid (LPA) [PubChem=3988]. www.broad.mit.e...
Broad HSIAO_LIVER_SPECIFIC_GENES View Gene Set 0.002488 236 0.03542 167 Liver selective genes www.broad.mit.e...
Broad MOOTHA_GLYCOLYSIS View Gene Set 0.002475 21 0.03542 167 Genes involved in glycolysis; based on literature and sequence annotation resources and converted to Affymetrix HG-U133A probe sets. www.broad.mit.e...
Broad HUANG_FOXA2_TARGETS_DN View Gene Set 0.002567 36 0.03592 169 Genes down-regulated in H358 cells (lung cancer) by inducible expression of FOXA2 [GeneID=3170] in a Tet-off system. www.broad.mit.e...
Broad VALK_AML_CLUSTER_2 View Gene Set 0.002566 28 0.03592 169 Top 40 genes from cluster 2 of acute myeloid leukemia (AML) expression profile; 71% of the samples are FAB M4 or M5 subtypes and 82% bear internal tundem duplications in FLT3 [Gene ID=2322]. www.broad.mit.e...
Broad HOSHIDA_LIVER_CANCER_SUBCLASS_S3 View Gene Set 0.002568 266 0.03592 169 Genes from 'subtype S3' signature of hepatocellular carcinoma (HCC): hepatocyte differentiation. www.broad.mit.e...
Broad CUI_TCF21_TARGETS_UP View Gene Set 0.002618 36 0.03641 172 Genes most strongly up-regulated in kidney glomeruli isolated from TCF21 [Gene ID=6943] knockout mice. www.broad.mit.e...
Broad DUNNE_TARGETS_OF_AML1_MTG8_FUSION_UP View Gene Set 0.002641 46 0.03652 173 Genes up-regulated in Kasumi-1 cells (acute myeloid leukaemia (AML) with the t(8;21) translocation) after knockdown of the AML1 MTG8 fusion [Gene ID=861 862] by RNAi. www.broad.mit.e...
Broad TONKS_TARGETS_OF_RUNX1_RUNX1T1_FUSION_SUSTAINED_IN_MONOCYTE_UP View Gene Set 0.002755 20 0.03787 174 Genes up-regulated by RUNX1-RUNX1T1 [Gene ID=861 862] fusion protein in normal hematopoietic progenitors; their expression was sustained in subsequently developing monocytes. www.broad.mit.e...
Broad ROPERO_HDAC2_TARGETS View Gene Set 0.002775 99 0.03793 175 Genes up-regulated genes in cell lines with HDAC2 [Gene ID=3066] loss of function (LOS). www.broad.mit.e...
Broad WANG_CLIM2_TARGETS_UP View Gene Set 0.002833 236 0.03801 176 Genes up-regulated in MCF7 cells (breast cancer) engineered to conditionally express a dominant negative form of CLIM2 [Gene ID=8861] by a Tet Off system. www.broad.mit.e...
Broad LIN_APC_TARGETS View Gene Set 0.002806 52 0.03801 176 Genes up-regulated by forced expression of APC [Gene ID=324] in the APC-deficient SW480 cell line (colon cancer). www.broad.mit.e...
Broad COULOUARN_TEMPORAL_TGFB1_SIGNATURE_DN View Gene Set 0.002845 118 0.03801 176 'Early-TGFB1 signature': genes overexpressed in primary hepatocytes at an early phase of TGFB1 [Gene ID=7040] treatment; is associated with a less invasive phenotype. www.broad.mit.e...
Broad VERRECCHIA_DELAYED_RESPONSE_TO_TGFB1 View Gene Set 0.002817 36 0.03801 176 ECM related genes up-regulated later than 30 min following addition of TGFB1 [Gene ID=7040] in dermal fibroblasts. www.broad.mit.e...
Broad FIRESTEIN_PROLIFERATION View Gene Set 0.002895 159 0.03822 180 Genes required for proliferation of DLD-1 cell (colon cancer with APC [Gene ID=324] deletions) based on shRNA screen. www.broad.mit.e...
Broad HOSHIDA_LIVER_CANCER_SUBCLASS_S1 View Gene Set 0.002908 237 0.03822 180 Genes from 'subtype S1' signature of hepatocellular carcinoma (HCC): aberrant activation of the WNT signaling pathway. www.broad.mit.e...
Broad ZHAN_MULTIPLE_MYELOMA_CD1_DN View Gene Set 0.002884 43 0.03822 180 Top 50 down-regulated genes in cluster CD-1 of multiple myeloma samples with the characteristic expression spike of CCND1 [Gene ID=595]. www.broad.mit.e...
Broad DAZARD_RESPONSE_TO_UV_NHEK_UP View Gene Set 0.002925 155 0.03824 183 Genes up-regulated in NHEK cells (normal keratinocytes) by UV-B irradiation. www.broad.mit.e...
Broad CHANG_CORE_SERUM_RESPONSE_DN View Gene Set 0.002978 30 0.03872 184 Down-regulated genes in the canonical gene expression signature of the fibroblast core serum response (CSR) defined by the Stanford group. www.broad.mit.e...
Broad MULLIGHAN_MLL_SIGNATURE_2_DN View Gene Set 0.003051 268 0.03927 185 The 'MLL signature 2': genes down-regulated in pediatric AML (acute myeloid leukemia) with rearranged MLL [Gene ID=4297] compared to the AML cases with intact MLL and NPM1 [Gene ID=4869]. www.broad.mit.e...
Broad BASSO_CD40_SIGNALING_DN View Gene Set 0.003058 66 0.03927 185 Gene changed by CD40 [Gene ID=958] signaling in Ramos cells (EBV negative Burkitt lymphoma). www.broad.mit.e...
Broad RIGGI_EWING_SARCOMA_PROGENITOR_UP View Gene Set 0.00307 399 0.03927 185 Genes up-regulated in mesenchymal stem cells (MSC) engineered to express EWS-FLI1 [Gene ID=2130 2321] fusion protein. www.broad.mit.e...
Broad NAKAMURA_METASTASIS_MODEL_DN View Gene Set 0.003115 41 0.03951 188 Top genes up-regulated in subcutaneous tumors from highly metastatic pancreatic cancer cells. www.broad.mit.e...
Broad MOOTHA_GLUCONEOGENESIS View Gene Set 0.003122 32 0.03951 188 Genes involved in gluconeogenesis; based on literature and sequence annotation resources and converted to Affymetrix HG-U133A probe sets. www.broad.mit.e...
Broad DAZARD_UV_RESPONSE_CLUSTER_G24 View Gene Set 0.003237 18 0.04075 190 Cluster G24: genes induced in NHEK (normal keratinocyte) but not in SCC12B2 cells (squamous cell carcinoma) by UV-B radiation. www.broad.mit.e...
Broad SENGUPTA_NASOPHARYNGEAL_CARCINOMA_DN View Gene Set 0.003342 296 0.04164 191 Genes down-regulated in nsopharyngeal carcinoma relative to the normal tissue. www.broad.mit.e...
Broad MODY_HIPPOCAMPUS_POSTNATAL View Gene Set 0.003341 22 0.04164 191 Genes up-regulated in hyppocampus at late postnatal stages (clusters 11 and 15). www.broad.mit.e...
Broad ACEVEDO_METHYLATED_IN_LIVER_CANCER_UP View Gene Set 0.003422 2268 0.04241 193 Genes whose DNA is hypo-methylated in hepatocellular carcinoma (HCC) compared to normal liver. www.broad.mit.e...
Broad ZHAN_V1_LATE_DIFFERENTIATION_GENES_UP View Gene Set 0.00346 31 0.04267 194 The v1LDG set: most variable late differentiation genes (LDG) with similar expression patterns in tonsil plasma cells (TPC) and multiple myeloma (MM) samples. www.broad.mit.e...
Broad GARCIA_TARGETS_OF_FLI1_AND_DAX1_UP View Gene Set 0.003502 44 0.04274 195 Genes up-regulated in the A673 cells (Ewing sarcoma) after double knockdown of both FLI1 and DAX1 [Gene ID=2313 190] by RNAi. www.broad.mit.e...
Broad GNATENKO_PLATELET_SIGNATURE View Gene Set 0.003496 36 0.04274 195 Top 50 most up-regulated genes in human platelet cells. www.broad.mit.e...
Broad MOREIRA_RESPONSE_TO_TSA_DN View Gene Set 0.00359 18 0.04359 197 Down-regulated in CD4+ [Gene ID=920] T lymphocytes after 4 h treatment with 100 nM TSA [PubChem=5562]. www.broad.mit.e...
Broad POMEROY_MEDULLOBLASTOMA_PROGNOSIS_UP View Gene Set 0.003655 35 0.04416 198 Top marker genes in medulloblastoma associated with good response to treatment (good outcome). www.broad.mit.e...
Broad BOYAULT_LIVER_CANCER_SUBCLASS_G23_DN View Gene Set 0.003741 10 0.04496 199 Down-regulated genes in hepatocellular carcinoma (HCC) subclass G23 defined by unsupervised clustering. www.broad.mit.e...
Broad OUELLET_CULTURED_OVARIAN_CANCER_INVASIVE_VS_LMP_DN View Gene Set 0.003866 34 0.04559 200 Genes down-regulated in pirmary cultures of epithelial ovarian cancer (EOC): invasive (TOV) vs low malignant potential (LMP) tumors. www.broad.mit.e...

Gene Set Collection: Broad.c2.CP

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad ST_WNT_CA2_CYCLIC_GMP_PATHWAY View Gene Set 0.0001176 19 0.002764 1 Wnt/Ca2+/cyclic GMP signaling. www.broad.mit.e...
Broad ST_GA12_PATHWAY View Gene Set 6.216e-05 23 0.002764 1 G alpha 12 Pathway www.broad.mit.e...
Broad SIG_BCR_SIGNALING_PATHWAY View Gene Set 0.0001855 46 0.002906 3 Members of the BCR signaling pathway www.broad.mit.e...
Broad ST_INTEGRIN_SIGNALING_PATHWAY View Gene Set 0.0002541 78 0.002986 4 Integrin Signaling Pathway www.broad.mit.e...
Broad SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES View Gene Set 0.001495 34 0.01405 5 Genes related to PIP3 signaling in B lymphocytes www.broad.mit.e...
Broad ST_GAQ_PATHWAY View Gene Set 0.001877 27 0.0147 6 G alpha q Pathway www.broad.mit.e...
Broad ST_ADRENERGIC View Gene Set 0.002554 34 0.01715 7 Adrenergic Pathway www.broad.mit.e...
Broad ST_G_ALPHA_I_PATHWAY View Gene Set 0.003148 34 0.0185 8 G alpha i Pathway www.broad.mit.e...
Broad ST_GA13_PATHWAY View Gene Set 0.004602 35 0.02403 9 G alpha 13 Pathway www.broad.mit.e...
Broad ST_DIFFERENTIATION_PATHWAY_IN_PC12_CELLS View Gene Set 0.008257 42 0.03528 10 Differentiation Pathway in PC12 Cells; this is a specific case of PAC1 Receptor Pathway. www.broad.mit.e...
Broad ST_FAS_SIGNALING_PATHWAY View Gene Set 0.008053 59 0.03528 10 Fas Signaling Pathway www.broad.mit.e...
Broad SIG_IL4RECEPTOR_IN_B_LYPHOCYTES View Gene Set 0.009693 27 0.03796 12 Genes related to IL4 rceptor signaling in B lymphocytes www.broad.mit.e...
Broad ST_T_CELL_SIGNAL_TRANSDUCTION View Gene Set 0.01172 44 0.04239 13 T Cell Signal Transduction www.broad.mit.e...
Broad SIG_CD40PATHWAYMAP View Gene Set 0.01297 33 0.04353 14 Genes related to CD40 signaling www.broad.mit.e...
Broad SIG_INSULIN_RECEPTOR_PATHWAY_IN_CARDIAC_MYOCYTES View Gene Set 0.01488 49 0.04663 15 Genes related to the insulin receptor pathway www.broad.mit.e...

Gene Set Collection: Broad.c2.CP.BIOCARTA

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad BIOCARTA_BIOPEPTIDES_PATHWAY View Gene Set 1.197e-05 43 0.001298 1 Bioactive Peptide Induced Signaling Pathway www.broad.mit.e...
Broad BIOCARTA_BAD_PATHWAY View Gene Set 1.005e-05 26 0.001298 1 Regulation of BAD phosphorylation www.broad.mit.e...
Broad BIOCARTA_IL22BP_PATHWAY View Gene Set 0.0001139 16 0.008239 3 IL22 Soluble Receptor Signaling Pathway www.broad.mit.e...
Broad BIOCARTA_CSK_PATHWAY View Gene Set 0.00248 24 0.03166 4 Activation of Csk by cAMP-dependent Protein Kinase Inhibits Signaling through the T Cell Receptor www.broad.mit.e...
Broad BIOCARTA_HDAC_PATHWAY View Gene Set 0.001957 30 0.03166 4 Control of skeletal myogenesis by HDAC and calcium/calmodulin-dependent kinase (CaMK) www.broad.mit.e...
Broad BIOCARTA_CTL_PATHWAY View Gene Set 0.001482 15 0.03166 4 CTL mediated immune response against target cells www.broad.mit.e...
Broad BIOCARTA_TCAPOPTOSIS_PATHWAY View Gene Set 0.002168 11 0.03166 4 HIV Induced T Cell Apoptosis www.broad.mit.e...
Broad BIOCARTA_MPR_PATHWAY View Gene Set 0.0006622 34 0.03166 4 How Progesterone Initiates Oocyte Membrane www.broad.mit.e...
Broad BIOCARTA_IL10_PATHWAY View Gene Set 0.002358 17 0.03166 4 IL-10 Anti-inflammatory Signaling Pathway www.broad.mit.e...
Broad BIOCARTA_IL2RB_PATHWAY View Gene Set 0.00216 38 0.03166 4 IL-2 Receptor Beta Chain in T cell Activation www.broad.mit.e...
Broad BIOCARTA_MCALPAIN_PATHWAY View Gene Set 0.000919 25 0.03166 4 mCalpain and friends in Cell motility www.broad.mit.e...
Broad BIOCARTA_NO2IL12_PATHWAY View Gene Set 0.0023 17 0.03166 4 NO2-dependent IL 12 Pathway in NK cells www.broad.mit.e...
Broad BIOCARTA_CHREBP2_PATHWAY View Gene Set 0.001003 42 0.03166 4 Regulation And Function Of ChREBP in Liver www.broad.mit.e...
Broad BIOCARTA_RHO_PATHWAY View Gene Set 0.001186 32 0.03166 4 Rho cell motility signaling pathway www.broad.mit.e...
Broad BIOCARTA_MET_PATHWAY View Gene Set 0.001464 37 0.03166 4 Signaling of Hepatocyte Growth Factor Receptor www.broad.mit.e...
Broad BIOCARTA_STATHMIN_PATHWAY View Gene Set 0.001795 19 0.03166 4 Stathmin and breast cancer resistance to antimicrotubule agents www.broad.mit.e...
Broad BIOCARTA_CTLA4_PATHWAY View Gene Set 0.001472 21 0.03166 4 The Co-Stimulatory Signal During T-cell Activation www.broad.mit.e...
Broad BIOCARTA_TCRA_PATHWAY View Gene Set 0.003199 13 0.03857 18 Lck and Fyn tyrosine kinases in initiation of TCR Activation www.broad.mit.e...
Broad BIOCARTA_NFAT_PATHWAY View Gene Set 0.003749 54 0.04282 19 NFAT and Hypertrophy of the heart (Transcription in the broken heart) www.broad.mit.e...
Broad BIOCARTA_ECM_PATHWAY View Gene Set 0.004522 24 0.04705 20 Erk and PI-3 Kinase Are Necessary for Collagen Binding in Corneal Epithelia www.broad.mit.e...
Broad BIOCARTA_GATA3_PATHWAY View Gene Set 0.004877 16 0.04705 20 GATA3 participate in activating the Th2 cytokine genes expression www.broad.mit.e...
Broad BIOCARTA_IL12_PATHWAY View Gene Set 0.004757 23 0.04705 20 IL12 and Stat4 Dependent Signaling Pathway in Th1 Development www.broad.mit.e...
Broad BIOCARTA_CK1_PATHWAY View Gene Set 0.005258 17 0.04705 20 Regulation of ck1/cdk5 by type 1 glutamate receptors www.broad.mit.e...
Broad BIOCARTA_HSP27_PATHWAY View Gene Set 0.005283 15 0.04705 20 Stress Induction of HSP Regulation www.broad.mit.e...
Broad BIOCARTA_CREB_PATHWAY View Gene Set 0.00542 27 0.04705 20 Transcription factor CREB and its extracellular signals www.broad.mit.e...
Broad BIOCARTA_ERK5_PATHWAY View Gene Set 0.005858 18 0.04889 26 Role of Erk5 in Neuronal Survival www.broad.mit.e...

Gene Set Collection: Broad.c2.CP.KEGG

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad KEGG_CELL_ADHESION_MOLECULES_CAMS View Gene Set 3.426e-13 134 6.373e-11 1 Cell adhesion molecules (CAMs) www.broad.mit.e...
Broad KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION View Gene Set 9.03e-11 272 8.398e-09 2 Neuroactive ligand-receptor interaction www.broad.mit.e...
Broad KEGG_NATURAL_KILLER_CELL_MEDIATED_CYTOTOXICITY View Gene Set 4.088e-08 137 2.535e-06 3 Natural killer cell mediated cytotoxicity www.broad.mit.e...
Broad KEGG_HEMATOPOIETIC_CELL_LINEAGE View Gene Set 3.266e-07 88 1.519e-05 4 Hematopoietic cell lineage www.broad.mit.e...
Broad KEGG_CALCIUM_SIGNALING_PATHWAY View Gene Set 9.129e-07 178 3.396e-05 5 Calcium signaling pathway www.broad.mit.e...
Broad KEGG_GRAFT_VERSUS_HOST_DISEASE View Gene Set 1.585e-06 42 4.915e-05 6 Graft-versus-host disease www.broad.mit.e...
Broad KEGG_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION View Gene Set 2.846e-06 118 7.561e-05 7 Leukocyte transendothelial migration www.broad.mit.e...
Broad KEGG_AXON_GUIDANCE View Gene Set 4.243e-06 129 9.865e-05 8 Axon guidance www.broad.mit.e...
Broad KEGG_GNRH_SIGNALING_PATHWAY View Gene Set 8.284e-06 101 0.0001712 9 GnRH signaling pathway www.broad.mit.e...
Broad KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY View Gene Set 1.086e-05 79 0.0002019 10 Fc epsilon RI signaling pathway www.broad.mit.e...
Broad KEGG_INSULIN_SIGNALING_PATHWAY View Gene Set 1.339e-05 137 0.0002264 11 Insulin signaling pathway www.broad.mit.e...
Broad KEGG_CHEMOKINE_SIGNALING_PATHWAY View Gene Set 2.051e-05 190 0.0003179 12 Chemokine signaling pathway www.broad.mit.e...
Broad KEGG_REGULATION_OF_ACTIN_CYTOSKELETON View Gene Set 2.636e-05 216 0.0003772 13 Regulation of actin cytoskeleton www.broad.mit.e...
Broad KEGG_PATHWAYS_IN_CANCER View Gene Set 2.986e-05 328 0.0003967 14 Pathways in cancer www.broad.mit.e...
Broad KEGG_TYPE_I_DIABETES_MELLITUS View Gene Set 3.288e-05 44 0.0004077 15 Type I diabetes mellitus www.broad.mit.e...
Broad KEGG_FOCAL_ADHESION View Gene Set 5.667e-05 201 0.0006587 16 Focal adhesion www.broad.mit.e...
Broad KEGG_ALLOGRAFT_REJECTION View Gene Set 7.612e-05 38 0.0008328 17 Allograft rejection www.broad.mit.e...
Broad KEGG_ANTIGEN_PROCESSING_AND_PRESENTATION View Gene Set 9.415e-05 89 0.0008339 18 Antigen processing and presentation www.broad.mit.e...
Broad KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY View Gene Set 8.88e-05 109 0.0008339 18 T cell receptor signaling pathway www.broad.mit.e...
Broad KEGG_NEUROTROPHIN_SIGNALING_PATHWAY View Gene Set 8.112e-05 126 0.0008339 18 Neurotrophin signaling pathway www.broad.mit.e...
Broad KEGG_AUTOIMMUNE_THYROID_DISEASE View Gene Set 9.1e-05 53 0.0008339 18 Autoimmune thyroid disease www.broad.mit.e...
Broad KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION View Gene Set 0.0001178 267 0.0009527 22 Cytokine-cytokine receptor interaction www.broad.mit.e...
Broad KEGG_TYPE_II_DIABETES_MELLITUS View Gene Set 0.000113 47 0.0009527 22 Type II diabetes mellitus www.broad.mit.e...
Broad KEGG_VEGF_SIGNALING_PATHWAY View Gene Set 0.0001633 76 0.001265 24 VEGF signaling pathway www.broad.mit.e...
Broad KEGG_MAPK_SIGNALING_PATHWAY View Gene Set 0.0003415 267 0.002541 25 MAPK signaling pathway www.broad.mit.e...
Broad KEGG_DILATED_CARDIOMYOPATHY View Gene Set 0.000381 92 0.002726 26 Dilated cardiomyopathy www.broad.mit.e...
Broad KEGG_PRIMARY_IMMUNODEFICIENCY View Gene Set 0.000404 35 0.002783 27 Primary immunodeficiency www.broad.mit.e...
Broad KEGG_VASCULAR_SMOOTH_MUSCLE_CONTRACTION View Gene Set 0.0005685 115 0.003527 28 Vascular smooth muscle contraction www.broad.mit.e...
Broad KEGG_HEDGEHOG_SIGNALING_PATHWAY View Gene Set 0.0005878 56 0.003527 28 Hedgehog signaling pathway www.broad.mit.e...
Broad KEGG_GLIOMA View Gene Set 0.0005376 65 0.003527 28 Glioma www.broad.mit.e...
Broad KEGG_HYPERTROPHIC_CARDIOMYOPATHY_HCM View Gene Set 0.0005844 85 0.003527 28 Hypertrophic cardiomyopathy (HCM) www.broad.mit.e...
Broad KEGG_DRUG_METABOLISM_CYTOCHROME_P450 View Gene Set 0.001014 72 0.005717 32 Drug metabolism - cytochrome P450 www.broad.mit.e...
Broad KEGG_LYSOSOME View Gene Set 0.001012 122 0.005717 32 Lysosome www.broad.mit.e...
Broad KEGG_TASTE_TRANSDUCTION View Gene Set 0.001232 52 0.006738 34 Taste transduction www.broad.mit.e...
Broad KEGG_OLFACTORY_TRANSDUCTION View Gene Set 0.001283 389 0.006818 35 Olfactory transduction www.broad.mit.e...
Broad KEGG_ARACHIDONIC_ACID_METABOLISM View Gene Set 0.001559 58 0.008057 36 Arachidonic acid metabolism www.broad.mit.e...
Broad KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC View Gene Set 0.001687 76 0.00848 37 Arrhythmogenic right ventricular cardiomyopathy (ARVC) www.broad.mit.e...
Broad KEGG_FC_GAMMA_R_MEDIATED_PHAGOCYTOSIS View Gene Set 0.002017 97 0.009872 38 Fc gamma R-mediated phagocytosis www.broad.mit.e...
Broad KEGG_MELANOGENESIS View Gene Set 0.002089 102 0.009964 39 Melanogenesis www.broad.mit.e...
Broad KEGG_BASAL_CELL_CARCINOMA View Gene Set 0.002218 55 0.01032 40 Basal cell carcinoma www.broad.mit.e...
Broad KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM View Gene Set 0.00244 76 0.01107 41 Phosphatidylinositol signaling system www.broad.mit.e...
Broad KEGG_ERBB_SIGNALING_PATHWAY View Gene Set 0.002904 87 0.01286 42 ErbB signaling pathway www.broad.mit.e...
Broad KEGG_NITROGEN_METABOLISM View Gene Set 0.003328 23 0.01439 43 Nitrogen metabolism www.broad.mit.e...
Broad KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION View Gene Set 0.003483 48 0.01472 44 Intestinal immune network for IgA production www.broad.mit.e...
Broad KEGG_VIBRIO_CHOLERAE_INFECTION View Gene Set 0.003739 56 0.01545 45 Vibrio cholerae infection www.broad.mit.e...
Broad KEGG_PANCREATIC_CANCER View Gene Set 0.004206 70 0.01701 46 Pancreatic cancer www.broad.mit.e...
Broad KEGG_ECM_RECEPTOR_INTERACTION View Gene Set 0.004529 84 0.01792 47 ECM-receptor interaction www.broad.mit.e...
Broad KEGG_ARGININE_AND_PROLINE_METABOLISM View Gene Set 0.005472 54 0.0212 48 Arginine and proline metabolism www.broad.mit.e...
Broad KEGG_AMYOTROPHIC_LATERAL_SCLEROSIS_ALS View Gene Set 0.006718 53 0.0255 49 Amyotrophic lateral sclerosis (ALS) www.broad.mit.e...
Broad KEGG_ENDOCYTOSIS View Gene Set 0.007347 183 0.02733 50 Endocytosis www.broad.mit.e...
Broad KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY View Gene Set 0.008296 102 0.02995 51 Toll-like receptor signaling pathway www.broad.mit.e...
Broad KEGG_LEISHMANIA_INFECTION View Gene Set 0.008374 72 0.02995 51 Leishmania infection www.broad.mit.e...
Broad KEGG_B_CELL_RECEPTOR_SIGNALING_PATHWAY View Gene Set 0.01045 75 0.03666 53 B cell receptor signaling pathway www.broad.mit.e...
Broad KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_KERATAN_SULFATE View Gene Set 0.0108 15 0.03721 54 Glycosaminoglycan biosynthesis - keratan sulfate www.broad.mit.e...
Broad KEGG_PEROXISOME View Gene Set 0.01193 78 0.04026 55 Peroxisome www.broad.mit.e...
Broad KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY View Gene Set 0.01212 67 0.04026 55 Adipocytokine signaling pathway www.broad.mit.e...
Broad KEGG_ACUTE_MYELOID_LEUKEMIA View Gene Set 0.01297 60 0.04233 57 Acute myeloid leukemia www.broad.mit.e...
Broad KEGG_METABOLISM_OF_XENOBIOTICS_BY_CYTOCHROME_P450 View Gene Set 0.01393 70 0.04466 58 Metabolism of xenobiotics by cytochrome P450 www.broad.mit.e...
Broad KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION View Gene Set 0.01434 44 0.0452 59 Vasopressin-regulated water reabsorption www.broad.mit.e...
Broad KEGG_JAK_STAT_SIGNALING_PATHWAY View Gene Set 0.01496 155 0.04636 60 Jak-STAT signaling pathway www.broad.mit.e...
Broad KEGG_NON_SMALL_CELL_LUNG_CANCER View Gene Set 0.01566 54 0.04697 61 Non-small cell lung cancer www.broad.mit.e...
Broad KEGG_ASTHMA View Gene Set 0.01563 30 0.04697 61 Asthma www.broad.mit.e...
Broad KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM View Gene Set 0.01655 31 0.04887 63 Glycine serine and threonine metabolism www.broad.mit.e...
Broad KEGG_MELANOMA View Gene Set 0.01682 71 0.04889 64 Melanoma www.broad.mit.e...
Broad KEGG_GAP_JUNCTION View Gene Set 0.01767 90 0.04979 65 Gap junction www.broad.mit.e...
Broad KEGG_PROXIMAL_TUBULE_BICARBONATE_RECLAMATION View Gene Set 0.01755 23 0.04979 65 Proximal tubule bicarbonate reclamation www.broad.mit.e...

Gene Set Collection: Broad.c2.CP.REACTOME

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad REACTOME_SIGNALING_IN_IMMUNE_SYSTEM View Gene Set 1.272e-14 366 5.47e-12 1 Genes involved in Signaling in Immune system www.broad.mit.e...
Broad REACTOME_DOWNSTREAM_EVENTS_IN_GPCR_SIGNALING View Gene Set 7.333e-11 448 1.051e-08 2 Genes involved in Downstream events in GPCR signaling www.broad.mit.e...
Broad REACTOME_GPCR_LIGAND_BINDING View Gene Set 5.734e-11 392 1.051e-08 2 Genes involved in GPCR ligand binding www.broad.mit.e...
Broad REACTOME_IMMUNOREGULATORY_INTERACTIONS_BETWEEN_A_LYMPHOID_AND_A_NON_LYMPHOID_CELL View Gene Set 3.13e-09 106 3.365e-07 4 Genes involved in Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell www.broad.mit.e...
Broad REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS View Gene Set 3.363e-08 292 2.892e-06 5 Genes involved in Class A/1 (Rhodopsin-like receptors) www.broad.mit.e...
Broad REACTOME_TRANSMISSION_ACROSS_CHEMICAL_SYNAPSES View Gene Set 1.467e-07 130 1.051e-05 6 Genes involved in Transmission across Chemical Synapses www.broad.mit.e...
Broad REACTOME_CELL_SURFACE_INTERACTIONS_AT_THE_VASCULAR_WALL View Gene Set 5.802e-07 94 3.564e-05 7 Genes involved in Cell surface interactions at the vascular wall www.broad.mit.e...
Broad REACTOME_AXON_GUIDANCE View Gene Set 1.462e-06 160 7.859e-05 8 Genes involved in Axon guidance www.broad.mit.e...
Broad REACTOME_HEMOSTASIS View Gene Set 3.236e-06 274 0.0001546 9 Genes involved in Hemostasis www.broad.mit.e...
Broad REACTOME_G_ALPHA_I_SIGNALLING_EVENTS View Gene Set 9.929e-06 177 0.0003881 10 Genes involved in G alpha (i) signalling events www.broad.mit.e...
Broad REACTOME_SIGNALLING_BY_NGF View Gene Set 9.625e-06 216 0.0003881 10 Genes involved in Signalling by NGF www.broad.mit.e...
Broad REACTOME_CELL_CELL_ADHESION_SYSTEMS View Gene Set 1.334e-05 59 0.000478 12 Genes involved in Cell-cell adhesion systems www.broad.mit.e...
Broad REACTOME_NCAM1_INTERACTIONS View Gene Set 2.979e-05 43 0.0009855 13 Genes involved in NCAM1 interactions www.broad.mit.e...
Broad REACTOME_POST_NMDA_RECEPTOR_ACTIVATION_EVENTS View Gene Set 3.969e-05 32 0.001219 14 Genes involved in Post NMDA receptor activation events www.broad.mit.e...
Broad REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH View Gene Set 4.379e-05 68 0.001255 15 Genes involved in NCAM signaling for neurite out-growth www.broad.mit.e...
Broad REACTOME_NEURORANSMITTER_RECEPTOR_BINDING_AND_DOWNSTREAM_TRANSMISSION_IN_THE_POSTSYNAPTIC_CELL View Gene Set 5.992e-05 84 0.001516 16 Genes involved in Neuroransmitter Receptor Binding And Downstream Transmission In The Postsynaptic Cell www.broad.mit.e...
Broad REACTOME_CREB_PHOPHORYLATION_THROUGH_THE_ACTIVATION_OF_RAS View Gene Set 5.651e-05 26 0.001516 16 Genes involved in CREB phophorylation through the activation of Ras www.broad.mit.e...
Broad REACTOME_CELL_JUNCTION_ORGANIZATION View Gene Set 6.404e-05 84 0.00153 18 Genes involved in Cell junction organization www.broad.mit.e...
Broad REACTOME_NEF_MEDIATES_DOWN_MODULATION_OF_CELL_SURFACE_RECEPTORS_BY_RECRUITING_THEM_TO_CLATHRIN_ADAPTERS View Gene Set 7.127e-05 21 0.001613 19 Genes involved in Nef-mediates down modulation of cell surface receptors by recruiting them to clathrin adapters www.broad.mit.e...
Broad REACTOME_RAS_ACTIVATION_UOPN_CA2_INFUX_THROUGH_NMDA_RECEPTOR View Gene Set 8.535e-05 18 0.001835 20 Genes involved in Ras activation uopn Ca2+ infux through NMDA receptor www.broad.mit.e...
Broad REACTOME_PEPTIDE_LIGAND_BINDING_RECEPTORS View Gene Set 0.0001076 173 0.002203 21 Genes involved in Peptide ligand-binding receptors www.broad.mit.e...
Broad REACTOME_PLC_GAMMA1_SIGNALLING View Gene Set 0.0001318 35 0.002575 22 Genes involved in PLC-gamma1 signalling www.broad.mit.e...
Broad REACTOME_SLC_MEDIATED_TRANSMEMBRANE_TRANSPORT View Gene Set 0.0001878 169 0.003511 23 Genes involved in SLC-mediated transmembrane transport www.broad.mit.e...
Broad REACTOME_PHASE_1_FUNCTIONALIZATION View Gene Set 0.0002325 15 0.004165 24 Genes involved in Phase 1 functionalization www.broad.mit.e...
Broad REACTOME_ACTIVATION_OF_NMDA_RECEPTOR_UPON_GLUTAMATE_BINDING_AND_POSTSYNAPTIC_EVENTS View Gene Set 0.0003392 36 0.005835 25 Genes involved in Activation of NMDA receptor upon glutamate binding and postsynaptic events www.broad.mit.e...
Broad REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS View Gene Set 0.0004071 156 0.006483 26 Genes involved in G alpha (q) signalling events www.broad.mit.e...
Broad REACTOME_PLATELET_ACTIVATION View Gene Set 0.0003926 167 0.006483 26 Genes involved in Platelet Activation www.broad.mit.e...
Broad REACTOME_FORMATION_OF_PLATELET_PLUG View Gene Set 0.0005015 186 0.007461 28 Genes involved in Formation of Platelet plug www.broad.mit.e...
Broad REACTOME_SEMAPHORIN_INTERACTIONS View Gene Set 0.0005379 66 0.007461 28 Genes involved in Semaphorin interactions www.broad.mit.e...
Broad REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS View Gene Set 0.0005227 28 0.007461 28 Genes involved in The role of Nef in HIV-1 replication and disease pathogenesis www.broad.mit.e...
Broad REACTOME_CREB_PHOSPHORYLATION_THROUGH_THE_ACTIVATION_OF_CAMKII View Gene Set 0.0005343 16 0.007461 28 Genes involved in CREB phosphorylation through the activation of CaMKII www.broad.mit.e...
Broad REACTOME_GENERATION_OF_SECOND_MESSENGER_MOLECULES View Gene Set 0.0006038 37 0.008113 32 Genes involved in Generation of second messenger molecules www.broad.mit.e...
Broad REACTOME_NEUROTRANSMITTER_RELEASE_CYCLE View Gene Set 0.0006235 28 0.008125 33 Genes involved in Neurotransmitter Release Cycle www.broad.mit.e...
Broad REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY View Gene Set 0.0008411 70 0.01033 34 Genes involved in Costimulation by the CD28 family www.broad.mit.e...
Broad REACTOME_TRKA_SIGNALLING_FROM_THE_PLASMA_MEMBRANE View Gene Set 0.0008365 103 0.01033 34 Genes involved in TRKA signalling from the plasma membrane www.broad.mit.e...
Broad REACTOME_TRANSLOCATION_OF_ZAP70_TO_IMMUNOLOGICAL_SYNAPSE View Gene Set 0.001063 24 0.0127 36 Genes involved in Translocation of ZAP-70 to Immunological synapse www.broad.mit.e...
Broad REACTOME_TIGHT_JUNCTION_INTERACTIONS View Gene Set 0.0011 30 0.01278 37 Genes involved in Tight junction interactions www.broad.mit.e...
Broad REACTOME_INORGANIC_CATION_ANION_SLC_TRANSPORTERS View Gene Set 0.001356 94 0.01534 38 Genes involved in Inorganic cation/anion SLC transporters www.broad.mit.e...
Broad REACTOME_GLYCOLYSIS View Gene Set 0.00143 22 0.01576 39 Genes involved in Glycolysis www.broad.mit.e...
Broad REACTOME_CLASS_B2_SECRETIN_FAMILY_RECEPTORS View Gene Set 0.001657 85 0.01781 40 Genes involved in Class B/2 (Secretin family receptors) www.broad.mit.e...
Broad REACTOME_REGULATION_OF_INSULIN_SECRETION_BY_GLUCAGON_LIKE_PEPTIDE_1 View Gene Set 0.001809 61 0.01852 41 Genes involved in Regulation of Insulin Secretion by Glucagon-like Peptide-1 www.broad.mit.e...
Broad REACTOME_AMINE_COMPOUND_SLC_TRANSPORTERS View Gene Set 0.001772 29 0.01852 41 Genes involved in Amine compound SLC transporters www.broad.mit.e...
Broad REACTOME_ADHERENS_JUNCTIONS_INTERACTIONS View Gene Set 0.001958 29 0.01958 43 Genes involved in Adherens junctions interactions www.broad.mit.e...
Broad REACTOME_PLATELET_DEGRANULATION View Gene Set 0.002051 86 0.02004 44 Genes involved in Platelet degranulation www.broad.mit.e...
Broad REACTOME_AMINE_LIGAND_BINDING_RECEPTORS View Gene Set 0.003129 42 0.02925 45 Genes involved in Amine ligand-binding receptors www.broad.mit.e...
Broad REACTOME_G_ALPHA_S_SIGNALLING_EVENTS View Gene Set 0.003128 126 0.02925 45 Genes involved in G alpha (s) signalling events www.broad.mit.e...
Broad REACTOME_CTLA4_INHIBITORY_SIGNALING View Gene Set 0.003565 21 0.03262 47 Genes involved in CTLA4 inhibitory signaling www.broad.mit.e...
Broad REACTOME_GLUCAGON_SIGNALING_IN_METABOLIC_REGULATION View Gene Set 0.004036 34 0.03615 48 Genes involved in Glucagon signaling in metabolic regulation www.broad.mit.e...
Broad REACTOME_RHO_GTPASE_CYCLE View Gene Set 0.00413 124 0.03624 49 Genes involved in Rho GTPase cycle www.broad.mit.e...
Broad REACTOME_PECAM1_INTERACTIONS View Gene Set 0.004296 12 0.03695 50 Genes involved in PECAM1 interactions www.broad.mit.e...
Broad REACTOME_SEROTONIN_NEUROTRANSMITTER_RELEASE_CYCLE View Gene Set 0.004901 14 0.04132 51 Genes involved in Serotonin Neurotransmitter Release Cycle www.broad.mit.e...
Broad REACTOME_PHOSPHORYLATION_OF_CD3_AND_TCR_ZETA_CHAINS View Gene Set 0.005446 26 0.04418 52 Genes involved in Phosphorylation of CD3 and TCR zeta chains www.broad.mit.e...
Broad REACTOME_MYOGENESSIS View Gene Set 0.005418 29 0.04418 52 Genes involved in MyoGenessis www.broad.mit.e...
Broad REACTOME_PD1_SIGNALING View Gene Set 0.005571 29 0.04436 54 Genes involved in PD-1 signaling www.broad.mit.e...
Broad REACTOME_INNATE_IMMUNITY_SIGNALING View Gene Set 0.005686 136 0.04446 55 Genes involved in Innate Immunity Signaling www.broad.mit.e...
Broad REACTOME_NOREPINEPHRINE_NEUROTRANSMITTER_RELEASE_CYCLE View Gene Set 0.00585 12 0.04492 56 Genes involved in Norepinephrine Neurotransmitter Release Cycle www.broad.mit.e...
Broad REACTOME_BOTULINUM_NEUROTOXICITY View Gene Set 0.006568 18 0.04955 57 Genes involved in Botulinum neurotoxicity www.broad.mit.e...

Gene Set Collection: Broad.c3.MIR

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad CCCAGAG MIR-326 View Gene Set 1.672e-05 130 0.003694 1 Targets of MicroRNA CCCAGAG MIR-326 www.broad.mit.e... MIR-326...
Broad GGGGCCC MIR-296 View Gene Set 8.311e-05 61 0.009184 2 Targets of MicroRNA GGGGCCC MIR-296 www.broad.mit.e... MIR-296...
Broad AGGGCAG MIR-18A View Gene Set 0.0001875 116 0.01381 3 Targets of MicroRNA AGGGCAG MIR-18A www.broad.mit.e... MIR-18A...
Broad GAGCTGG MIR-337 View Gene Set 0.0008459 133 0.04673 4 Targets of MicroRNA GAGCTGG MIR-337 www.broad.mit.e... MIR-337...

Gene Set Collection: Broad.c3.TFT

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad CAGCTG_V$AP4_Q5 View Gene Set 3.866e-18 1129 2.378e-15 1 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif CAGCTG which matches annotation for REPIN1: replication initiator 1 www.broad.mit.e...
Broad CAGGTG_V$E12_Q6 View Gene Set 4.78e-17 1818 1.47e-14 2 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif CAGGTG which matches annotation for TCF3: transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47) www.broad.mit.e...
Broad GGGTGGRR_V$PAX4_03 View Gene Set 1.313e-11 994 2.691e-09 3 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GGGTGGRR which matches annotation for PAX4: paired box gene 4 www.broad.mit.e...
Broad GGGAGGRR_V$MAZ_Q6 View Gene Set 1.796e-11 1701 2.761e-09 4 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GGGAGGRR which matches annotation for MAZ: MYC-associated zinc finger protein (purine-binding transcription factor) www.broad.mit.e...
Broad GCANCTGNY_V$MYOD_Q6 View Gene Set 6.854e-11 673 8.43e-09 5 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GCANCTGNY which matches annotation for MYOD1: myogenic differentiation 1 www.broad.mit.e...
Broad CTGCAGY_UNKNOWN View Gene Set 5.949e-09 570 6.098e-07 6 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif CTGCAGY. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$AP4_01 View Gene Set 3.272e-08 190 2.875e-06 7 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif WGARYCAGCTGYGGNCNK which matches annotation for TFAP4: transcription factor AP-4 (activating enhancer binding protein 4) www.broad.mit.e...
Broad V$GATA_C View Gene Set 6.396e-08 204 3.933e-06 8 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NGATAAGNMNN which matches annotation for GATA1: GATA binding protein 1 (globin transcription factor 1) www.broad.mit.e...
Broad V$E2A_Q2 View Gene Set 6.156e-08 179 3.933e-06 8 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NCACCTGYYNCNKN which matches annotation for TCF3: transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47) www.broad.mit.e...
Broad TGGNNNNNNKCCAR_UNKNOWN View Gene Set 6.26e-08 314 3.933e-06 8 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif TGGNNNNNNKCCAR. Motif does not match any known transcription factor www.broad.mit.e...
Broad TGANTCA_V$AP1_C View Gene Set 8.413e-08 850 4.704e-06 11 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TGANTCA which matches annotation for JUN: jun oncogene www.broad.mit.e...
Broad V$E12_Q6 View Gene Set 1.158e-07 191 5.936e-06 12 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif RRCAGGTGNCV which matches annotation for TCF3: transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47) www.broad.mit.e...
Broad GTGGGTGK_UNKNOWN View Gene Set 1.734e-07 224 8.202e-06 13 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif GTGGGTGK. Motif does not match any known transcription factor www.broad.mit.e...
Broad RNGTGGGC_UNKNOWN View Gene Set 4.096e-07 557 1.799e-05 14 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif RNGTGGGC. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$IRF_Q6 View Gene Set 7.37e-07 174 2.833e-05 15 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif BNCRSTTTCANTTYY which matches annotation for IRF1: interferon regulatory factor 1 www.broad.mit.e...
Broad RYTTCCTG_V$ETS2_B View Gene Set 6.967e-07 809 2.833e-05 15 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif RYTTCCTG which matches annotation for ETS2: v-ets erythroblastosis virus E26 oncogene homolog 2 (avian) www.broad.mit.e...
Broad TGCCAAR_V$NF1_Q6 View Gene Set 1.149e-06 532 4.158e-05 17 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TGCCAAR which matches annotation for NF1: neurofibromin 1 (neurofibromatosis von Recklinghausen disease Watson disease) www.broad.mit.e...
Broad V$MYB_Q6 View Gene Set 1.645e-06 179 5.62e-05 18 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNNAACTGNC which matches annotation for MYB: v-myb myeloblastosis viral oncogene homolog (avian) www.broad.mit.e...
Broad V$E47_01 View Gene Set 2.72e-06 201 8.804e-05 19 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif VSNGCAGGTGKNCNN which matches annotation for TCF3: transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47) www.broad.mit.e...
Broad V$AP1FJ_Q2 View Gene Set 2.948e-06 223 9.065e-05 20 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif RSTGACTNMNW which matches annotation for JUN: jun oncogene www.broad.mit.e...
Broad GATAAGR_V$GATA_C View Gene Set 4.568e-06 232 0.0001279 21 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif GATAAGR. Motif does not match any known transcription factor www.broad.mit.e...
Broad TTCYNRGAA_V$STAT5B_01 View Gene Set 4.575e-06 247 0.0001279 21 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TTCYNRGAA which matches annotation for STAT5B: signal transducer and activator of transcription 5B www.broad.mit.e...
Broad V$ISRE_01 View Gene Set 7.045e-06 171 0.0001884 23 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif CAGTTTCWCTTTYCC which matches annotation for STAT1: signal transducer and activator of transcription 1 91kDa<br> STAT2: signal transducer and activator of transcription 2 113kDa www.broad.mit.e...
Broad V$AP1_Q6_01 View Gene Set 7.914e-06 201 0.0001947 24 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NTGACTCAN which matches annotation for JUN: jun oncogene www.broad.mit.e...
Broad WGGAATGY_V$TEF1_Q6 View Gene Set 7.692e-06 281 0.0001947 24 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif WGGAATGY which matches annotation for TEAD1: TEA domain family member 1 (SV40 transcriptional enhancer factor) www.broad.mit.e...
Broad V$AP4_Q6 View Gene Set 8.407e-06 170 0.0001988 26 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif CWCAGCTGGN which matches annotation for TFAP4: transcription factor AP-4 (activating enhancer binding protein 4) www.broad.mit.e...
Broad V$MYOD_Q6_01 View Gene Set 8.957e-06 182 0.000204 27 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif CNGNRNCAGGTGNNGNAN which matches annotation for MYOD1: myogenic differentiation 1 www.broad.mit.e...
Broad V$NFKB_C View Gene Set 1.082e-05 209 0.0002377 28 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif NGGGACTTTCCA. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$ZIC1_01 View Gene Set 1.129e-05 201 0.0002395 29 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif KGGGTGGTC which matches annotation for ZIC1: Zic family member 1 (odd-paired homolog Drosophila) www.broad.mit.e...
Broad V$LMO2COM_02 View Gene Set 1.367e-05 194 0.0002802 30 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NMGATANSG which matches annotation for LMO2: LIM domain only 2 (rhombotin-like 1) www.broad.mit.e...
Broad V$MYB_Q5_01 View Gene Set 1.432e-05 186 0.0002841 31 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NAACNGNCN which matches annotation for MYB: v-myb myeloblastosis viral oncogene homolog (avian) www.broad.mit.e...
Broad V$CACBINDINGPROTEIN_Q6 View Gene Set 1.61e-05 175 0.0003094 32 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif GRGGSTGGG. Motif does not match any known transcription factor www.broad.mit.e...
Broad CTTTGA_V$LEF1_Q2 View Gene Set 1.719e-05 902 0.0003204 33 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif CTTTGA which matches annotation for LEF1: lymphoid enhancer-binding factor 1 www.broad.mit.e...
Broad V$PEA3_Q6 View Gene Set 2.012e-05 178 0.0003639 34 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif ACWTCCK which matches annotation for ETV4: ets variant gene 4 (E1A enhancer binding protein E1AF) www.broad.mit.e...
Broad V$AP1_C View Gene Set 2.172e-05 222 0.0003816 35 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NTGASTCAG which matches annotation for JUN: jun oncogene www.broad.mit.e...
Broad V$AR_01 View Gene Set 2.384e-05 106 0.0004073 36 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GGTACANNRTGTTCT which matches annotation for AR: androgen receptor (dihydrotestosterone receptor; testicular feminization; spinal and bulbar muscular atrophy; Kennedy disease) www.broad.mit.e...
Broad TGGAAA_V$NFAT_Q4_01 View Gene Set 2.619e-05 1403 0.0004354 37 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TGGAAA which matches annotation for NFAT<br> NFATC www.broad.mit.e...
Broad V$NKX62_Q2 View Gene Set 3.227e-05 187 0.0005223 38 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NWADTAAWTANN which matches annotation for NKX6-2: NK6 transcription factor related locus 2 (Drosophila) www.broad.mit.e...
Broad V$AP4_Q5 View Gene Set 3.71e-05 206 0.000585 39 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif VDCAGCTGNN which matches annotation for TFAP4: transcription factor AP-4 (activating enhancer binding protein 4) www.broad.mit.e...
Broad V$MYOD_Q6 View Gene Set 3.907e-05 187 0.0005861 40 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNCACCTGNY which matches annotation for MYOD1: myogenic differentiation 1 www.broad.mit.e...
Broad V$AREB6_02 View Gene Set 3.822e-05 189 0.0005861 40 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif WNWCACCTGWNN which matches annotation for TCF8: transcription factor 8 (represses interleukin 2 expression) www.broad.mit.e...
Broad V$EGR2_01 View Gene Set 4.456e-05 145 0.0006483 42 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NTGCGTRGGCGK which matches annotation for EGR2: early growth response 2 (Krox-20 homolog Drosophila) www.broad.mit.e...
Broad V$SREBP1_Q6 View Gene Set 4.533e-05 195 0.0006483 42 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif CACSCCA which matches annotation for SREBF1: sterol regulatory element binding transcription factor 1 www.broad.mit.e...
Broad CTTTGT_V$LEF1_Q2 View Gene Set 4.728e-05 1458 0.0006608 44 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif CTTTGT which matches annotation for LEF1: lymphoid enhancer-binding factor 1 www.broad.mit.e...
Broad V$MYB_Q3 View Gene Set 5.158e-05 173 0.0007049 45 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNNGNCAGTTN which matches annotation for MYB: v-myb myeloblastosis viral oncogene homolog (avian) www.broad.mit.e...
Broad V$NFE2_01 View Gene Set 5.275e-05 208 0.0007052 46 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TGCTGAGTCAY which matches annotation for NFE2: nuclear factor (erythroid-derived 2) 45kDa www.broad.mit.e...
Broad V$TEF1_Q6 View Gene Set 5.624e-05 167 0.0007359 47 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif GRRATG. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$GATA_Q6 View Gene Set 6.191e-05 159 0.0007932 48 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif WGATARN which matches annotation for GATA1: GATA binding protein 1 (globin transcription factor 1) www.broad.mit.e...
Broad V$STAT5A_01 View Gene Set 7.288e-05 190 0.0009147 49 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NAWTTCYNGGAANYN which matches annotation for STAT5A: signal transducer and activator of transcription 5A www.broad.mit.e...
Broad CCTNTMAGA_UNKNOWN View Gene Set 7.766e-05 94 0.0009553 50 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif CCTNTMAGA. Motif does not match any known transcription factor www.broad.mit.e...
Broad TGANNYRGCA_V$TCF11MAFG_01 View Gene Set 8.636e-05 218 0.001041 51 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TGANNYRGCA which matches annotation for NFE2L1: nuclear factor (erythroid-derived 2)-like 1<br> MAFG: v-maf musculoaponeurotic fibrosarcoma oncogene homolog G (avian) www.broad.mit.e...
Broad V$GATA3_01 View Gene Set 9.21e-05 185 0.001069 52 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNGATARNG which matches annotation for GATA3: GATA binding protein 3 www.broad.mit.e...
Broad V$LHX3_01 View Gene Set 9.106e-05 182 0.001069 52 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif AATTAATTAA which matches annotation for LHX3: LIM homeobox 3 www.broad.mit.e...
Broad V$SP1_Q2_01 View Gene Set 9.384e-05 185 0.001069 52 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif CCCCGCCCCN which matches annotation for SP1: Sp1 transcription factor www.broad.mit.e...
Broad V$P53_02 View Gene Set 9.957e-05 189 0.001113 55 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NGRCWTGYCY which matches annotation for TP53: tumor protein p53 (Li-Fraumeni syndrome) www.broad.mit.e...
Broad V$AREB6_04 View Gene Set 0.0001104 193 0.001213 56 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif CBGTTTSNN which matches annotation for TCF8: transcription factor 8 (represses interleukin 2 expression) www.broad.mit.e...
Broad GCCNNNWTAAR_UNKNOWN View Gene Set 0.0001379 113 0.001488 57 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif GCCNNNWTAAR. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$CACCCBINDINGFACTOR_Q6 View Gene Set 0.0001552 203 0.001646 58 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif CANCCNNWGGGTGDGG. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$AP1_Q6 View Gene Set 0.0001773 199 0.001818 59 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNTGACTCANN which matches annotation for JUN: jun oncogene www.broad.mit.e...
Broad V$ICSBP_Q6 View Gene Set 0.0001754 186 0.001818 59 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif RAARTGAAACTG which matches annotation for IRF8: interferon regulatory factor 8 www.broad.mit.e...
Broad V$VDR_Q3 View Gene Set 0.0001811 172 0.001826 61 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GGGKNARNRRGGWSA which matches annotation for VDR: vitamin D (1 25- dihydroxyvitamin D3) receptor www.broad.mit.e...
Broad V$STAT5B_01 View Gene Set 0.0001944 188 0.001928 62 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NAWTTCYNGGAAWTN which matches annotation for STAT5B: signal transducer and activator of transcription 5B www.broad.mit.e...
Broad V$MAF_Q6 View Gene Set 0.0002037 202 0.00196 63 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TRGRRGGAAGTKKSST which matches annotation for MAF: v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian) www.broad.mit.e...
Broad TAATTA_V$CHX10_01 View Gene Set 0.0002039 612 0.00196 63 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TAATTA which matches annotation for VSX1: visual system homeobox 1 homolog CHX10-like (zebrafish) www.broad.mit.e...
Broad V$S8_01 View Gene Set 0.0002198 195 0.002079 65 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif WNNANYYAATTANCNN which matches annotation for PRRX2: paired related homeobox 2 www.broad.mit.e...
Broad V$GATA1_02 View Gene Set 0.0002248 183 0.002092 66 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNNNNGATANKGNN which matches annotation for GATA1: GATA binding protein 1 (globin transcription factor 1) www.broad.mit.e...
Broad V$NRSF_01 View Gene Set 0.0002279 76 0.002092 66 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TTCAGCACCACGGACAGMGCC which matches annotation for REST: RE1-silencing transcription factor www.broad.mit.e...
Broad V$CHX10_01 View Gene Set 0.0002364 182 0.002138 68 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNNTAATTAGCNNN which matches annotation for VSX1: visual system homeobox 1 homolog CHX10-like (zebrafish) www.broad.mit.e...
Broad GGGYGTGNY_UNKNOWN View Gene Set 0.000271 487 0.002415 69 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif GGGYGTGNY. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$IK2_01 View Gene Set 0.0003134 208 0.002753 70 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif NNNTGGGAWNNC. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$RORA1_01 View Gene Set 0.0003271 189 0.002833 71 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NWAWNNAGGTCAN which matches annotation for RORA: RAR-related orphan receptor A www.broad.mit.e...
Broad TGTTTGY_V$HNF3_Q6 View Gene Set 0.0003583 560 0.00306 72 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TGTTTGY which matches annotation for FOXA1: forkhead box A1 www.broad.mit.e...
Broad V$NF1_Q6_01 View Gene Set 0.000369 202 0.003109 73 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NTGGNNNNNNGCCAANN which matches annotation for NF1: neurofibromin 1 (neurofibromatosis von Recklinghausen disease Watson disease) www.broad.mit.e...
Broad TATAAA_V$TATA_01 View Gene Set 0.0004448 1012 0.003696 74 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TATAAA which matches annotation for TAF<br> TATA www.broad.mit.e...
Broad V$CP2_01 View Gene Set 0.0004692 194 0.003848 75 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GCHCDAMCCAG which matches annotation for TFCP2: transcription factor CP2 www.broad.mit.e...
Broad V$HEB_Q6 View Gene Set 0.000493 200 0.003989 76 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif RCCWGCTG which matches annotation for TCF12: transcription factor 12 (HTF4 helix-loop-helix transcription factors 4) www.broad.mit.e...
Broad YATGNWAAT_V$OCT_C View Gene Set 0.0005011 289 0.004002 77 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif YATGNWAAT. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$NF1_Q6 View Gene Set 0.0006115 206 0.004821 78 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNTTGGCNNNNNNCCNNN which matches annotation for NF1: neurofibromin 1 (neurofibromatosis von Recklinghausen disease Watson disease) www.broad.mit.e...
Broad V$RP58_01 View Gene Set 0.000674 179 0.005181 79 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNAACATCTGGA which matches annotation for ZNF238: zinc finger protein 238 www.broad.mit.e...
Broad V$AP4_Q6_01 View Gene Set 0.000668 191 0.005181 79 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif RNCAGCTGC which matches annotation for TFAP4: transcription factor AP-4 (activating enhancer binding protein 4) www.broad.mit.e...
Broad V$FXR_IR1_Q6 View Gene Set 0.0007341 85 0.005505 81 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GGGTBAATRACCY which matches annotation for RXRA: retinoid X receptor alpha www.broad.mit.e...
Broad CAGGTA_V$AREB6_01 View Gene Set 0.0007336 575 0.005505 81 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif CAGGTA which matches annotation for TCF8: transcription factor 8 (represses interleukin 2 expression) www.broad.mit.e...
Broad V$STAT_Q6 View Gene Set 0.0007484 190 0.005546 83 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif NNNNNTTCTKGGA. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$NFKAPPAB_01 View Gene Set 0.0007684 191 0.005563 84 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GGGAMTTYCC which matches annotation for NFKB<br> RELA: v-rel reticuloendotheliosis viral oncogene homolog A nuclear factor of kappa light polypeptide gene enhancer in B-cells 3 p65 (avian) www.broad.mit.e...
Broad V$ERR1_Q2 View Gene Set 0.0007688 193 0.005563 84 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNNTNAAGGTCANN which matches annotation for ESRRA: estrogen-related receptor alpha www.broad.mit.e...
Broad V$CP2_02 View Gene Set 0.0008258 178 0.005906 86 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GCTGGNTNGNNCYNG which matches annotation for TFCP2: transcription factor CP2 www.broad.mit.e...
Broad V$MZF1_01 View Gene Set 0.0008554 179 0.006046 87 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif NGNGGGGA. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$AML_Q6 View Gene Set 0.0009633 196 0.006732 88 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNGKNTGTGGTTWNC which matches annotation for RUNX1: runt-related transcription factor 1 (acute myeloid leukemia 1; aml1 oncogene) www.broad.mit.e...
Broad V$OCT1_Q6 View Gene Set 0.0009993 202 0.006905 89 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNNNATGCAAATNAN which matches annotation for POU2F1: POU domain class 2 transcription factor 1 www.broad.mit.e...
Broad CTTTAAR_UNKNOWN View Gene Set 0.001093 739 0.007466 90 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif CTTTAAR. Motif does not match any known transcription factor www.broad.mit.e...
Broad CAGNWMCNNNGAC_UNKNOWN View Gene Set 0.001129 68 0.007629 91 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif CAGNWMCNNNGAC. Motif does not match any known transcription factor www.broad.mit.e...
Broad STTTCRNTTT_V$IRF_Q6 View Gene Set 0.001378 147 0.009212 92 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif STTTCRNTTT. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$NFKB_Q6 View Gene Set 0.001487 197 0.009835 93 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif NGGGGAMTTTCCNN. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$NERF_Q2 View Gene Set 0.001529 183 0.009896 94 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif YRNCAGGAAGYRNSTBDS which matches annotation for ELF2: E74-like factor 2 (ets domain transcription factor) www.broad.mit.e...
Broad V$SREBP_Q3 View Gene Set 0.00152 185 0.009896 94 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif VNNVTCACCCYA. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$GATA6_01 View Gene Set 0.001546 191 0.009904 96 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNNGATWANN which matches annotation for GATA6: GATA binding protein 6 www.broad.mit.e...
Broad AAANWWTGC_UNKNOWN View Gene Set 0.0016 162 0.01014 97 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif AAANWWTGC. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$AP1_01 View Gene Set 0.001713 204 0.01075 98 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNNTGAGTCAKCN which matches annotation for JUN: jun oncogene www.broad.mit.e...
Broad TGACCTY_V$ERR1_Q2 View Gene Set 0.001777 772 0.01104 99 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TGACCTY which matches annotation for ESRRA: estrogen-related receptor alpha www.broad.mit.e...
Broad ACAWYAAAG_UNKNOWN View Gene Set 0.001852 81 0.01139 100 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif ACAWYAAAG. Motif does not match any known transcription factor www.broad.mit.e...
Broad ACCTGTTG_UNKNOWN View Gene Set 0.001949 116 0.01163 101 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif ACCTGTTG. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$SOX9_B1 View Gene Set 0.001931 183 0.01163 101 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNNNAACAATRGNN which matches annotation for SOX9: SRY (sex determining region Y)-box 9 (campomelic dysplasia autosomal sex-reversal) www.broad.mit.e...
Broad V$AP2GAMMA_01 View Gene Set 0.001927 177 0.01163 101 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GCCYNNGGS which matches annotation for TFAP2C: transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma) www.broad.mit.e...
Broad V$EN1_01 View Gene Set 0.001972 84 0.01166 104 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GTANTNN which matches annotation for EN1: engrailed homolog 1 www.broad.mit.e...
Broad RYTGCNWTGGNR_UNKNOWN View Gene Set 0.002006 85 0.01168 105 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif RYTGCNWTGGNR. Motif does not match any known transcription factor www.broad.mit.e...
Broad YGTCCTTGR_UNKNOWN View Gene Set 0.002013 76 0.01168 105 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif YGTCCTTGR. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$TAL1ALPHAE47_01 View Gene Set 0.00204 192 0.01173 107 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNNAACAGATGKTNNN which matches annotation for TAL1: T-cell acute lymphocytic leukemia 1<br> TCF3: transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47) www.broad.mit.e...
Broad CCANNAGRKGGC_UNKNOWN View Gene Set 0.002111 84 0.01202 108 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif CCANNAGRKGGC. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$OLF1_01 View Gene Set 0.002148 199 0.01212 109 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNCDABTCCCYAGRGARBNKGN which matches annotation for OLF1<br> OR5I1: olfactory receptor family 5 subfamily I member 1 www.broad.mit.e...
Broad V$MEIS1_01 View Gene Set 0.002298 173 0.01285 110 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNNTGACAGNNN which matches annotation for MEIS1: Meis1 myeloid ecotropic viral integration site 1 homolog (mouse) www.broad.mit.e...
Broad V$TAL1BETAE47_01 View Gene Set 0.002345 184 0.01299 111 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNNAACAGATGKTNNN which matches annotation for TAL1: T-cell acute lymphocytic leukemia 1<br> TCF3: transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47) www.broad.mit.e...
Broad V$GATA1_03 View Gene Set 0.00242 190 0.01317 112 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif ANGNDGATAANNGN which matches annotation for GATA1: GATA binding protein 1 (globin transcription factor 1) www.broad.mit.e...
Broad CTGYNNCTYTAA_UNKNOWN View Gene Set 0.002417 60 0.01317 112 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif CTGYNNCTYTAA. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$MYOGENIN_Q6 View Gene Set 0.002457 187 0.01325 114 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif RGCAGSTG which matches annotation for MYOG: myogenin (myogenic factor 4) www.broad.mit.e...
Broad V$EGR1_01 View Gene Set 0.002495 193 0.01334 115 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif WTGCGTGGGCGK which matches annotation for EGR1: early growth response 1 www.broad.mit.e...
Broad V$HLF_01 View Gene Set 0.002733 194 0.01449 116 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GTTACRYAAT which matches annotation for HLF: hepatic leukemia factor www.broad.mit.e...
Broad CTGRYYYNATT_UNKNOWN View Gene Set 0.002968 51 0.01547 117 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif CTGRYYYNATT. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$PXR_Q2 View Gene Set 0.002967 195 0.01547 117 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif RRGGTYANTRNM which matches annotation for NR1H4: nuclear receptor subfamily 1 group H member 4 www.broad.mit.e...
Broad V$NGFIC_01 View Gene Set 0.003041 181 0.01572 119 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif WTGCGTGGGYGG which matches annotation for EGR4: early growth response 4 www.broad.mit.e...
Broad V$STAT_01 View Gene Set 0.003078 197 0.01577 120 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif TTCCCGKAA. Motif does not match any known transcription factor www.broad.mit.e...
Broad ARGGGTTAA_UNKNOWN View Gene Set 0.003332 97 0.01694 121 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif ARGGGTTAA. Motif does not match any known transcription factor www.broad.mit.e...
Broad AACTTT_UNKNOWN View Gene Set 0.003453 1437 0.01727 122 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif AACTTT. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$RREB1_01 View Gene Set 0.003437 163 0.01727 122 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif CCCCAAACMMCCCC which matches annotation for RREB1: ras responsive element binding protein 1 www.broad.mit.e...
Broad V$E47_02 View Gene Set 0.003547 188 0.01745 124 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNNMRCAGGTGTTMNN which matches annotation for TCF3: transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47) www.broad.mit.e...
Broad V$SMAD4_Q6 View Gene Set 0.003539 173 0.01745 124 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GKSRKKCAGMCANCY which matches annotation for SMAD4: SMAD mothers against DPP homolog 4 (Drosophila) www.broad.mit.e...
Broad V$HEN1_02 View Gene Set 0.003712 141 0.01812 126 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNGGGNCGCAGCTGCGNCCCNN which matches annotation for NHLH1: nescient helix loop helix 1 www.broad.mit.e...
Broad GGATTA_V$PITX2_Q2 View Gene Set 0.003857 456 0.01868 127 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GGATTA which matches annotation for PITX2: paired-like homeodomain transcription factor 2 www.broad.mit.e...
Broad V$PPARA_01 View Gene Set 0.003939 29 0.01892 128 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif CARAACTAGGNCAAAGGTCA which matches annotation for PPARA: peroxisome proliferative activated receptor alpha www.broad.mit.e...
Broad TTANTCA_UNKNOWN View Gene Set 0.004258 702 0.0203 129 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif TTANTCA. Motif does not match any known transcription factor www.broad.mit.e...
Broad YTAATTAA_V$LHX3_01 View Gene Set 0.004473 144 0.02116 130 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif YTAATTAA which matches annotation for LHX3: LIM homeobox 3 www.broad.mit.e...
Broad V$AP1_Q2 View Gene Set 0.005041 216 0.02367 131 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif RSTGACTNANW which matches annotation for JUN: jun oncogene www.broad.mit.e...
Broad TGTYNNNNNRGCARM_UNKNOWN View Gene Set 0.005103 51 0.02378 132 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif TGTYNNNNNRGCARM. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$IK1_01 View Gene Set 0.005357 207 0.02477 133 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif NHNTGGGAATRCC. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$LYF1_01 View Gene Set 0.005467 204 0.02509 134 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif TTTGGGAGR. Motif does not match any known transcription factor www.broad.mit.e...
Broad AGCYRWTTC_UNKNOWN View Gene Set 0.005584 81 0.02544 135 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif AGCYRWTTC. Motif does not match any known transcription factor www.broad.mit.e...
Broad WCAANNNYCAG_UNKNOWN View Gene Set 0.005846 180 0.02643 136 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif WCAANNNYCAG. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$AP1_Q4 View Gene Set 0.006157 212 0.02764 137 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif RGTGACTMANN which matches annotation for JUN: jun oncogene www.broad.mit.e...
Broad V$MEF2_Q6_01 View Gene Set 0.006449 191 0.02874 138 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif RGCTATWTTTAR. Motif does not match any known transcription factor www.broad.mit.e...
Broad TTGTTT_V$FOXO4_01 View Gene Set 0.006526 1507 0.02887 139 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TTGTTT which matches annotation for MLLT7: myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog Drosophila); translocated to 7 www.broad.mit.e...
Broad V$HNF3B_01 View Gene Set 0.007014 173 0.03081 140 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif KGNANTRTTTRYTTW which matches annotation for FOXA2: forkhead box A2 www.broad.mit.e...
Broad V$CREBP1_Q2 View Gene Set 0.007655 185 0.03321 141 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif VGTGACGTMACN which matches annotation for ATF2: activating transcription factor 2 www.broad.mit.e...
Broad CTAWWWATA_V$RSRFC4_Q2 View Gene Set 0.007667 283 0.03321 141 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif CTAWWWATA which matches annotation for MEF2A: MADS box transcription enhancer factor 2 polypeptide A (myocyte enhancer factor 2A) www.broad.mit.e...
Broad V$NRF2_Q4 View Gene Set 0.007747 190 0.03332 143 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NTGCTGAGTCAKN which matches annotation for NFE2L2: nuclear factor (erythroid-derived 2)-like 2 www.broad.mit.e...
Broad V$FOXM1_01 View Gene Set 0.007885 186 0.03368 144 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif ARATKGAST which matches annotation for FOXM1: forkhead box M1 www.broad.mit.e...
Broad V$GATA2_01 View Gene Set 0.008032 84 0.03406 145 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNNGATRNNN which matches annotation for GATA2: GATA binding protein 2 www.broad.mit.e...
Broad V$COREBINDINGFACTOR_Q6 View Gene Set 0.008247 200 0.03474 146 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TGTGGTTW which matches annotation for CBFA2T2: core-binding factor runt domain alpha subunit 2; translocated to 2<br> CBFA2T3: core-binding factor runt domain alpha subunit 2; translocated to 3 www.broad.mit.e...
Broad YNGTTNNNATT_UNKNOWN View Gene Set 0.008442 265 0.03532 147 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif YNGTTNNNATT. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$SF1_Q6 View Gene Set 0.008692 187 0.03588 148 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TGRCCTTG which matches annotation for SF1: splicing factor 1 www.broad.mit.e...
Broad YWATTWNNRGCT_UNKNOWN View Gene Set 0.008688 50 0.03588 148 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif YWATTWNNRGCT. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$EGR3_01 View Gene Set 0.009366 54 0.03825 150 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NTGCGTGGGCGK which matches annotation for EGR3: early growth response 3 www.broad.mit.e...
Broad CCCNNGGGAR_V$OLF1_01 View Gene Set 0.009392 238 0.03825 150 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif CCCNNGGGAR which matches annotation for EBF2: early B-cell factor 2 www.broad.mit.e...
Broad V$ZIC3_01 View Gene Set 0.009521 205 0.03827 152 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NGGGKGGTC which matches annotation for ZIC3: Zic family member 3 heterotaxy 1 (odd-paired homolog Drosophila) www.broad.mit.e...
Broad WTTGKCTG_UNKNOWN View Gene Set 0.009495 387 0.03827 152 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif WTTGKCTG. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$GATA1_04 View Gene Set 0.00977 191 0.03902 154 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNCWGATARNNNN which matches annotation for GATA1: GATA binding protein 1 (globin transcription factor 1) www.broad.mit.e...
Broad TGASTMAGC_V$NFE2_01 View Gene Set 0.01027 151 0.04074 155 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TGASTMAGC which matches annotation for NFE2: nuclear factor (erythroid-derived 2) 45kDa www.broad.mit.e...
Broad V$TFIII_Q6 View Gene Set 0.01056 161 0.04162 156 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif RGAGGKAGG which matches annotation for GTF2A1: general transcription factor IIA 1 19/37kDa<br> GTF2A2: general transcription factor IIA 2 12kDa www.broad.mit.e...
Broad V$EVI1_03 View Gene Set 0.01067 44 0.04178 157 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif AGATAAGATAA which matches annotation for EVI1: ecotropic viral integration site 1 www.broad.mit.e...
Broad V$MYOD_01 View Gene Set 0.01102 187 0.04279 158 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif SRACAGGTGKYG which matches annotation for MYOD1: myogenic differentiation 1 www.broad.mit.e...
Broad YATTNATC_UNKNOWN View Gene Set 0.01109 275 0.04279 158 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif YATTNATC. Motif does not match any known transcription factor www.broad.mit.e...
Broad YGCANTGCR_UNKNOWN View Gene Set 0.01113 93 0.04279 158 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif YGCANTGCR. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$IRF7_01 View Gene Set 0.01153 201 0.04404 161 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TNSGAAWNCGAAANTNNN which matches annotation for IRF7: interferon regulatory factor 7 www.broad.mit.e...
Broad TGAYRTCA_V$ATF3_Q6 View Gene Set 0.01171 405 0.04447 162 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TGAYRTCA which matches annotation for ATF3: activating transcription factor 3 www.broad.mit.e...
Broad V$CREL_01 View Gene Set 0.01193 203 0.04488 163 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif SGGRNTTTCC which matches annotation for REL: v-rel reticuloendotheliosis viral oncogene homolog (avian) www.broad.mit.e...
Broad V$PR_01 View Gene Set 0.01197 109 0.04488 163 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNNNNNGGNACRNNNTGTTCTNNNNNN which matches annotation for PGR: progesterone receptor www.broad.mit.e...
Broad V$IK3_01 View Gene Set 0.0121 166 0.04509 165 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif TNYTGGGAATACC. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$HFH3_01 View Gene Set 0.01231 156 0.04533 166 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif KNNTRTTTRTTTA which matches annotation for FOXI1: forkhead box I1 www.broad.mit.e...
Broad V$NCX_01 View Gene Set 0.01226 130 0.04533 166 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNGTAAKTNG which matches annotation for TLX2: T-cell leukemia homeobox 2 www.broad.mit.e...
Broad V$EVI1_05 View Gene Set 0.01243 135 0.0455 168 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif AGATAAGATAN which matches annotation for EVI1: ecotropic viral integration site 1 www.broad.mit.e...
Broad V$CREBP1_01 View Gene Set 0.01301 123 0.04597 169 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TTACGTAA which matches annotation for ATF2: activating transcription factor 2 www.broad.mit.e...
Broad V$BRN2_01 View Gene Set 0.01283 188 0.04597 169 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNCATNSRWAATNMRN which matches annotation for POU3F2: POU domain class 3 transcription factor 2 www.broad.mit.e...
Broad V$SRF_Q6 View Gene Set 0.01299 209 0.04597 169 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GNCCAWATAWGGMN which matches annotation for SRF: serum response factor (c-fos serum response element-binding transcription factor) www.broad.mit.e...
Broad V$GFI1_01 View Gene Set 0.01269 199 0.04597 169 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNNNNNNAAATCACWGYNNNNNNN which matches annotation for GFI1: growth factor independent 1 www.broad.mit.e...
Broad V$PAX4_03 View Gene Set 0.01286 200 0.04597 169 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNNNNYCACCCB which matches annotation for PAX4: paired box gene 4 www.broad.mit.e...
Broad V$STAT3_02 View Gene Set 0.01302 113 0.04597 169 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNNTTCCN which matches annotation for STAT3: signal transducer and activator of transcription 3 (acute-phase response factor) www.broad.mit.e...
Broad V$STAT4_01 View Gene Set 0.01308 193 0.04597 169 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif SNWTTCNN which matches annotation for STAT4: signal transducer and activator of transcription 4 www.broad.mit.e...
Broad V$LMO2COM_01 View Gene Set 0.01336 190 0.04669 176 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif CNNCAGGTGBNN which matches annotation for LMO2: LIM domain only 2 (rhombotin-like 1) www.broad.mit.e...
Broad V$HNF1_C View Gene Set 0.01351 174 0.04694 177 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif DGTTAATKAWTNACCAM which matches annotation for TCF1: transcription factor 1 hepatic; LF-B1 hepatic nuclear factor (HNF1) albumin proximal factor www.broad.mit.e...
Broad V$NFKB_Q6_01 View Gene Set 0.01432 173 0.04947 178 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif NNNNKGGRAANTCCCN. Motif does not match any known transcription factor www.broad.mit.e...

Gene Set Collection: Broad.c4.CGN

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad MORF_BCL2 View Gene Set 1.641e-06 202 0.0001402 1 Neighborhood of BCL2 www.broad.mit.e...
Broad MORF_LTK View Gene Set 1.343e-06 133 0.0001402 1 Neighborhood of LTK www.broad.mit.e...
Broad MORF_PML View Gene Set 1.348e-06 129 0.0001402 1 Neighborhood of PML www.broad.mit.e...
Broad MORF_RAGE View Gene Set 1.556e-06 132 0.0001402 1 Neighborhood of RAGE www.broad.mit.e...
Broad MORF_TNFRSF25 View Gene Set 1.356e-06 242 0.0001402 1 Neighborhood of TNFRSF25 www.broad.mit.e...
Broad MORF_PDPK1 View Gene Set 2.775e-06 67 0.0001481 6 Neighborhood of PDPK1 www.broad.mit.e...
Broad GCM_HMGA2 View Gene Set 2.465e-06 123 0.0001481 6 Neighborhood of HMGA2 www.broad.mit.e...
Broad GNF2_DNM1 View Gene Set 2.332e-06 69 0.0001481 6 Neighborhood of DNM1 www.broad.mit.e...
Broad CAR_MYST2 View Gene Set 3.192e-06 27 0.0001514 9 Neighborhood of MYST2 www.broad.mit.e...
Broad MORF_JAK3 View Gene Set 4.147e-06 86 0.0001771 10 Neighborhood of JAK3 www.broad.mit.e...
Broad MORF_CNTN1 View Gene Set 1.175e-05 95 0.000456 11 Neighborhood of CNTN1 www.broad.mit.e...
Broad GCM_CDH5 View Gene Set 1.658e-05 35 0.0005899 12 Neighborhood of CDH5 www.broad.mit.e...
Broad MORF_CASP2 View Gene Set 1.943e-05 89 0.0006383 13 Neighborhood of CASP2 www.broad.mit.e...
Broad CAR_MLANA View Gene Set 2.41e-05 42 0.0006944 14 Neighborhood of MLANA www.broad.mit.e...
Broad CAR_WBSCR22 View Gene Set 2.439e-05 35 0.0006944 14 Neighborhood of WBSCR22 www.broad.mit.e...
Broad MORF_ARAF1 View Gene Set 4.083e-05 70 0.00109 16 Neighborhood of ARAF1 www.broad.mit.e...
Broad MORF_MYST2 View Gene Set 6.044e-05 60 0.001518 17 Neighborhood of MYST2 www.broad.mit.e...
Broad MORF_STK17A View Gene Set 0.00012 155 0.002846 18 Neighborhood of STK17A www.broad.mit.e...
Broad MORF_DDX11 View Gene Set 0.0001477 138 0.003083 19 Neighborhood of DDX11 www.broad.mit.e...
Broad GNF2_IL2RB View Gene Set 0.0001464 44 0.003083 19 Neighborhood of IL2RB www.broad.mit.e...
Broad GNF2_RAB3A View Gene Set 0.0001516 34 0.003083 19 Neighborhood of RAB3A www.broad.mit.e...
Broad MORF_ARL3 View Gene Set 0.0002008 291 0.003897 22 Neighborhood of ARL3 www.broad.mit.e...
Broad MORF_LMO1 View Gene Set 0.0002506 46 0.004652 23 Neighborhood of LMO1 www.broad.mit.e...
Broad MORF_NF1 View Gene Set 0.0002713 158 0.004828 24 Neighborhood of NF1 www.broad.mit.e...
Broad MORF_FLT1 View Gene Set 0.0002843 117 0.004856 25 Neighborhood of FLT1 www.broad.mit.e...
Broad GNF2_LCAT View Gene Set 0.0004042 123 0.006637 26 Neighborhood of LCAT www.broad.mit.e...
Broad GNF2_PTPN4 View Gene Set 0.0004285 47 0.006776 27 Neighborhood of PTPN4 www.broad.mit.e...
Broad GCM_SMARCD1 View Gene Set 0.0004709 101 0.007181 28 Neighborhood of SMARCD1 www.broad.mit.e...
Broad GNF2_HPN View Gene Set 0.0004911 132 0.00723 29 Neighborhood of HPN www.broad.mit.e...
Broad MORF_RBM8A View Gene Set 0.0005811 75 0.008271 30 Neighborhood of RBM8A www.broad.mit.e...
Broad GNF2_SPTA1 View Gene Set 0.0006883 75 0.009481 31 Neighborhood of SPTA1 www.broad.mit.e...
Broad MORF_FDXR View Gene Set 0.0007158 205 0.009551 32 Neighborhood of FDXR www.broad.mit.e...
Broad GNF2_PTPN6 View Gene Set 0.000759 44 0.009821 33 Neighborhood of PTPN6 www.broad.mit.e...
Broad MORF_NOS2A View Gene Set 0.0008579 276 0.01077 34 Neighborhood of NOS2A www.broad.mit.e...
Broad GCM_PTPRU View Gene Set 0.0009654 55 0.01178 35 Neighborhood of PTPRU www.broad.mit.e...
Broad GCM_MAPK10 View Gene Set 0.001075 75 0.01242 36 Neighborhood of MAPK10 www.broad.mit.e...
Broad GNF2_TM4SF2 View Gene Set 0.001076 23 0.01242 36 Neighborhood of TM4SF2 www.broad.mit.e...
Broad MORF_ETV3 View Gene Set 0.001197 63 0.01304 38 Neighborhood of ETV3 www.broad.mit.e...
Broad GCM_DDX11 View Gene Set 0.001218 38 0.01304 38 Neighborhood of DDX11 www.broad.mit.e...
Broad GNF2_CEBPA View Gene Set 0.001221 64 0.01304 38 Neighborhood of CEBPA www.broad.mit.e...
Broad MORF_MT4 View Gene Set 0.001374 218 0.01431 41 Neighborhood of MT4 www.broad.mit.e...
Broad GNF2_TST View Gene Set 0.001529 103 0.01555 42 Neighborhood of TST www.broad.mit.e...
Broad MORF_IL13 View Gene Set 0.001597 216 0.01586 43 Neighborhood of IL13 www.broad.mit.e...
Broad GNF2_HLA-C View Gene Set 0.001837 44 0.01783 44 Neighborhood of HLA-C www.broad.mit.e...
Broad GNF2_HPX View Gene Set 0.002204 134 0.02003 45 Neighborhood of HPX www.broad.mit.e...
Broad GNF2_ANK1 View Gene Set 0.002169 68 0.02003 45 Neighborhood of ANK1 www.broad.mit.e...
Broad GNF2_SPTB View Gene Set 0.002169 68 0.02003 45 Neighborhood of SPTB www.broad.mit.e...
Broad GNF2_INPP5D View Gene Set 0.002256 38 0.02007 48 Neighborhood of INPP5D www.broad.mit.e...
Broad GNF2_CD7 View Gene Set 0.002423 38 0.02112 49 Neighborhood of CD7 www.broad.mit.e...
Broad GCM_LTK View Gene Set 0.002743 43 0.02212 50 Neighborhood of LTK www.broad.mit.e...
Broad GCM_MYCL1 View Gene Set 0.002689 24 0.02212 50 Neighborhood of MYCL1 www.broad.mit.e...
Broad GCM_TEC View Gene Set 0.002746 33 0.02212 50 Neighborhood of TEC www.broad.mit.e...
Broad GNF2_GSTM1 View Gene Set 0.002663 108 0.02212 50 Neighborhood of GSTM1 www.broad.mit.e...
Broad MORF_FOSL1 View Gene Set 0.002993 386 0.02367 54 Neighborhood of FOSL1 www.broad.mit.e...
Broad MORF_PAX7 View Gene Set 0.003075 251 0.02388 55 Neighborhood of PAX7 www.broad.mit.e...
Broad MORF_KDR View Gene Set 0.003151 90 0.02402 56 Neighborhood of KDR www.broad.mit.e...
Broad GNF2_CD53 View Gene Set 0.004317 54 0.03022 57 Neighborhood of CD53 www.broad.mit.e...
Broad GNF2_MAPT View Gene Set 0.004305 38 0.03022 57 Neighborhood of MAPT www.broad.mit.e...
Broad GNF2_PCAF View Gene Set 0.00413 32 0.03022 57 Neighborhood of PCAF www.broad.mit.e...
Broad GNF2_TAL1 View Gene Set 0.004246 69 0.03022 57 Neighborhood of TAL1 www.broad.mit.e...
Broad GNF2_VAV1 View Gene Set 0.004253 34 0.03022 57 Neighborhood of VAV1 www.broad.mit.e...
Broad GNF2_JAK1 View Gene Set 0.004724 28 0.03254 62 Neighborhood of JAK1 www.broad.mit.e...
Broad GNF2_IGF1 View Gene Set 0.005035 26 0.03412 63 Neighborhood of IGF1 www.broad.mit.e...
Broad GCM_FCGR2B View Gene Set 0.006053 37 0.04039 64 Neighborhood of FCGR2B www.broad.mit.e...
Broad GNF2_MATK View Gene Set 0.006267 23 0.04117 65 Neighborhood of MATK www.broad.mit.e...
Broad MORF_MAGEA9 View Gene Set 0.006771 405 0.0438 66 Neighborhood of MAGEA9 www.broad.mit.e...
Broad GNF2_IGFBP1 View Gene Set 0.007747 35 0.04937 67 Neighborhood of IGFBP1 www.broad.mit.e...
Broad GNF2_TNFRSF1B View Gene Set 0.007957 60 0.04996 68 Neighborhood of TNFRSF1B www.broad.mit.e...

Gene Set Collection: Broad.c4.CM

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad module_64 View Gene Set 1.58e-24 506 3.662e-22 1 Genes in module_64 www.broad.mit.e...
Broad module_66 View Gene Set 2.42e-24 530 3.662e-22 1 Genes in module_66 www.broad.mit.e...
Broad module_100 View Gene Set 1.614e-24 523 3.662e-22 1 Genes in module_100 www.broad.mit.e...
Broad module_137 View Gene Set 5.895e-24 525 6.691e-22 4 Genes in module_137 www.broad.mit.e...
Broad module_11 View Gene Set 1.042e-23 520 9.462e-22 5 Genes in module_11 www.broad.mit.e...
Broad module_88 View Gene Set 3.37e-22 812 2.55e-20 6 Genes in module_88 www.broad.mit.e...
Broad module_41 View Gene Set 5.02e-21 542 3.256e-19 7 Genes in module_41 www.broad.mit.e...
Broad module_23 View Gene Set 1.528e-20 552 8.669e-19 8 Genes in module_23 www.broad.mit.e...
Broad module_55 View Gene Set 1.869e-20 807 9.43e-19 9 Genes in module_55 www.broad.mit.e...
Broad module_27 View Gene Set 7.421e-20 345 3.369e-18 10 Genes in module_27 www.broad.mit.e...
Broad module_45 View Gene Set 1.839e-17 563 7.592e-16 11 Genes in module_45 www.broad.mit.e...
Broad module_13 View Gene Set 5.968e-17 498 2.258e-15 12 Genes in module_13 www.broad.mit.e...
Broad module_60 View Gene Set 9.817e-17 403 3.428e-15 13 Genes in module_60 www.broad.mit.e...
Broad module_117 View Gene Set 8.856e-16 699 2.872e-14 14 Genes in module_117 www.broad.mit.e...
Broad module_181 View Gene Set 1.311e-15 292 3.969e-14 15 Genes in module_181 www.broad.mit.e...
Broad module_104 View Gene Set 1.719e-15 337 4.877e-14 16 Genes in module_104 www.broad.mit.e...
Broad module_84 View Gene Set 1.967e-15 526 5.252e-14 17 Genes in module_84 www.broad.mit.e...
Broad module_112 View Gene Set 1.262e-14 255 3.184e-13 18 Genes in module_112 www.broad.mit.e...
Broad module_176 View Gene Set 5.806e-13 225 1.387e-11 19 Genes in module_176 www.broad.mit.e...
Broad module_38 View Gene Set 8.874e-13 453 2.014e-11 20 Genes in module_38 www.broad.mit.e...
Broad module_46 View Gene Set 1.12e-12 386 2.42e-11 21 Genes in module_46 www.broad.mit.e...
Broad module_242 View Gene Set 1.296e-12 204 2.674e-11 22 Genes in module_242 www.broad.mit.e...
Broad module_379 View Gene Set 2.559e-12 194 5.05e-11 23 Genes in module_379 www.broad.mit.e...
Broad module_75 View Gene Set 2.713e-12 391 5.133e-11 24 Genes in module_75 www.broad.mit.e...
Broad module_63 View Gene Set 3.386e-11 210 6.148e-10 25 Genes in module_63 www.broad.mit.e...
Broad module_111 View Gene Set 4.512e-11 151 7.879e-10 26 Genes in module_111 www.broad.mit.e...
Broad module_24 View Gene Set 1.844e-10 443 3.101e-09 27 Genes in module_24 www.broad.mit.e...
Broad module_44 View Gene Set 4.174e-10 319 6.767e-09 28 Genes in module_44 www.broad.mit.e...
Broad module_274 View Gene Set 6.415e-10 82 1.004e-08 29 Genes in module_274 www.broad.mit.e...
Broad module_220 View Gene Set 1.03e-09 328 1.558e-08 30 Genes in module_220 www.broad.mit.e...
Broad module_113 View Gene Set 3.958e-09 105 5.797e-08 31 Genes in module_113 www.broad.mit.e...
Broad module_7 View Gene Set 8.834e-09 227 1.253e-07 32 Genes in module_7 www.broad.mit.e...
Broad module_99 View Gene Set 1.629e-08 346 2.242e-07 33 Genes in module_99 www.broad.mit.e...
Broad module_6 View Gene Set 1.694e-08 403 2.261e-07 34 Genes in module_6 www.broad.mit.e...
Broad module_12 View Gene Set 4.729e-08 346 6.135e-07 35 Genes in module_12 www.broad.mit.e...
Broad module_157 View Gene Set 5.203e-08 105 6.561e-07 36 Genes in module_157 www.broad.mit.e...
Broad module_20 View Gene Set 2.115e-07 81 2.595e-06 37 Genes in module_20 www.broad.mit.e...
Broad module_94 View Gene Set 2.631e-07 362 3.143e-06 38 Genes in module_94 www.broad.mit.e...
Broad module_119 View Gene Set 4.915e-07 135 5.722e-06 39 Genes in module_119 www.broad.mit.e...
Broad module_213 View Gene Set 5.487e-07 77 6.227e-06 40 Genes in module_213 www.broad.mit.e...
Broad module_33 View Gene Set 1.821e-06 369 2.016e-05 41 Genes in module_33 www.broad.mit.e...
Broad module_292 View Gene Set 2.312e-06 129 2.499e-05 42 Genes in module_292 www.broad.mit.e...
Broad module_146 View Gene Set 2.766e-06 92 2.921e-05 43 Genes in module_146 www.broad.mit.e...
Broad module_180 View Gene Set 3.619e-06 113 3.734e-05 44 Genes in module_180 www.broad.mit.e...
Broad module_257 View Gene Set 8.119e-06 137 8.191e-05 45 Genes in module_257 www.broad.mit.e...
Broad module_345 View Gene Set 1.753e-05 118 0.000173 46 Genes in module_345 www.broad.mit.e...
Broad module_122 View Gene Set 3.197e-05 138 0.0003088 47 Genes in module_122 www.broad.mit.e...
Broad module_436 View Gene Set 3.348e-05 129 0.0003166 48 Genes in module_436 www.broad.mit.e...
Broad module_51 View Gene Set 4.886e-05 36 0.0004527 49 Genes in module_51 www.broad.mit.e...
Broad module_171 View Gene Set 5.089e-05 131 0.000453 50 Genes in module_171 www.broad.mit.e...
Broad module_208 View Gene Set 5.016e-05 118 0.000453 50 Genes in module_208 www.broad.mit.e...
Broad module_139 View Gene Set 5.965e-05 74 0.0005208 52 Genes in module_139 www.broad.mit.e...
Broad module_5 View Gene Set 6.315e-05 420 0.0005409 53 Genes in module_5 www.broad.mit.e...
Broad module_19 View Gene Set 0.0001041 306 0.0008756 54 Genes in module_19 www.broad.mit.e...
Broad module_248 View Gene Set 0.0001121 126 0.0009254 55 Genes in module_248 www.broad.mit.e...
Broad module_92 View Gene Set 0.0001162 146 0.0009423 56 Genes in module_92 www.broad.mit.e...
Broad module_143 View Gene Set 0.0001285 14 0.001006 57 Genes in module_143 www.broad.mit.e...
Broad module_289 View Gene Set 0.0001266 118 0.001006 57 Genes in module_289 www.broad.mit.e...
Broad module_316 View Gene Set 0.000142 70 0.001093 59 Genes in module_316 www.broad.mit.e...
Broad module_85 View Gene Set 0.0001544 51 0.001168 60 Genes in module_85 www.broad.mit.e...
Broad module_342 View Gene Set 0.0001898 195 0.001413 61 Genes in module_342 www.broad.mit.e...
Broad module_188 View Gene Set 0.0002091 130 0.001515 62 Genes in module_188 www.broad.mit.e...
Broad module_223 View Gene Set 0.0002102 140 0.001515 62 Genes in module_223 www.broad.mit.e...
Broad module_144 View Gene Set 0.0002172 8 0.001541 64 Genes in module_144 www.broad.mit.e...
Broad module_145 View Gene Set 0.0002282 106 0.001594 65 Genes in module_145 www.broad.mit.e...
Broad module_324 View Gene Set 0.0002811 131 0.001934 66 Genes in module_324 www.broad.mit.e...
Broad module_80 View Gene Set 0.0003638 32 0.00246 67 Genes in module_80 www.broad.mit.e...
Broad module_259 View Gene Set 0.0003684 46 0.00246 67 Genes in module_259 www.broad.mit.e...
Broad module_199 View Gene Set 0.0003795 57 0.002497 69 Genes in module_199 www.broad.mit.e...
Broad module_200 View Gene Set 0.0004315 27 0.002799 70 Genes in module_200 www.broad.mit.e...
Broad module_2 View Gene Set 0.0004956 373 0.003169 71 Genes in module_2 www.broad.mit.e...
Broad module_381 View Gene Set 0.0005491 12 0.003462 72 Genes in module_381 www.broad.mit.e...
Broad module_430 View Gene Set 0.0006058 51 0.003768 73 Genes in module_430 www.broad.mit.e...
Broad module_129 View Gene Set 0.0009224 215 0.005618 74 Genes in module_129 www.broad.mit.e...
Broad module_135 View Gene Set 0.000928 25 0.005618 74 Genes in module_135 www.broad.mit.e...
Broad module_163 View Gene Set 0.001321 495 0.007891 76 Genes in module_163 www.broad.mit.e...
Broad module_293 View Gene Set 0.001495 12 0.008816 77 Genes in module_293 www.broad.mit.e...
Broad module_445 View Gene Set 0.00177 15 0.0103 78 Genes in module_445 www.broad.mit.e...
Broad module_95 View Gene Set 0.001856 490 0.01067 79 Genes in module_95 www.broad.mit.e...
Broad module_48 View Gene Set 0.001974 291 0.0112 80 Genes in module_48 www.broad.mit.e...
Broad module_306 View Gene Set 0.002099 26 0.01177 81 Genes in module_306 www.broad.mit.e...
Broad module_563 View Gene Set 0.002346 15 0.01299 82 Genes in module_563 www.broad.mit.e...
Broad module_301 View Gene Set 0.002466 144 0.01349 83 Genes in module_301 www.broad.mit.e...
Broad module_175 View Gene Set 0.002792 53 0.01509 84 Genes in module_175 www.broad.mit.e...
Broad module_172 View Gene Set 0.003221 93 0.01706 85 Genes in module_172 www.broad.mit.e...
Broad module_431 View Gene Set 0.003231 15 0.01706 85 Genes in module_431 www.broad.mit.e...
Broad module_267 View Gene Set 0.004052 15 0.02115 87 Genes in module_267 www.broad.mit.e...
Broad module_486 View Gene Set 0.004108 88 0.02119 88 Genes in module_486 www.broad.mit.e...
Broad module_238 View Gene Set 0.004593 150 0.02343 89 Genes in module_238 www.broad.mit.e...
Broad module_458 View Gene Set 0.004675 35 0.02358 90 Genes in module_458 www.broad.mit.e...
Broad module_216 View Gene Set 0.005004 9 0.02496 91 Genes in module_216 www.broad.mit.e...
Broad module_426 View Gene Set 0.005195 82 0.02564 92 Genes in module_426 www.broad.mit.e...
Broad module_375 View Gene Set 0.005441 84 0.02656 93 Genes in module_375 www.broad.mit.e...
Broad module_417 View Gene Set 0.005959 21 0.02878 94 Genes in module_417 www.broad.mit.e...
Broad module_484 View Gene Set 0.006064 39 0.02898 95 Genes in module_484 www.broad.mit.e...
Broad module_165 View Gene Set 0.006554 78 0.03068 96 Genes in module_165 www.broad.mit.e...
Broad module_361 View Gene Set 0.006507 136 0.03068 96 Genes in module_361 www.broad.mit.e...
Broad module_120 View Gene Set 0.006653 72 0.03082 98 Genes in module_120 www.broad.mit.e...
Broad module_513 View Gene Set 0.008074 8 0.03702 99 Genes in module_513 www.broad.mit.e...
Broad module_107 View Gene Set 0.008282 77 0.0376 100 Genes in module_107 www.broad.mit.e...
Broad module_1 View Gene Set 0.00843 355 0.03789 101 Genes in module_1 www.broad.mit.e...
Broad module_212 View Gene Set 0.009687 316 0.04312 102 Genes in module_212 www.broad.mit.e...
Broad module_465 View Gene Set 0.0109 15 0.04802 103 Genes in module_465 www.broad.mit.e...
Broad module_121 View Gene Set 0.01115 98 0.04865 104 Genes in module_121 www.broad.mit.e...
Broad module_305 View Gene Set 0.01132 19 0.04893 105 Genes in module_305 www.broad.mit.e...

Gene Set Collection: Broad.c5.BP

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad SIGNAL_TRANSDUCTION View Gene Set 1.165e-13 1597 9.611e-11 1 Genes annotated by the GO term GO:0007165. The cascade of processes by which a signal interacts with a receptor causing a change in the level or activity of a second messenger or other downstream target and ultimately effecting a change in the functioning of the cell. www.broad.mit.e...
Broad CELL_SURFACE_RECEPTOR_LINKED_SIGNAL_TRANSDUCTION_GO_0007166 View Gene Set 7.898e-12 620 2.682e-09 2 Genes annotated by the GO term GO:0007166. Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell. www.broad.mit.e...
Broad SYSTEM_PROCESS View Gene Set 9.753e-12 558 2.682e-09 2 Genes annotated by the GO term GO:0003008. A biological process occurring at the level of an organ system pertinent to the function of the organism. An organ system is a regularly interacting or interdependent group of organs or tissues that work together to carry out a given biological process. www.broad.mit.e...
Broad CELL_CELL_SIGNALING View Gene Set 7.883e-10 400 1.626e-07 4 Genes annotated by the GO term GO:0007267. Any process that mediates the transfer of information from one cell to another. www.broad.mit.e...
Broad G_PROTEIN_COUPLED_RECEPTOR_PROTEIN_SIGNALING_PATHWAY View Gene Set 5.893e-09 326 9.724e-07 5 Genes annotated by the GO term GO:0007186. The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand. www.broad.mit.e...
Broad ION_TRANSPORT View Gene Set 3.972e-08 183 5.461e-06 6 Genes annotated by the GO term GO:0006811. The directed movement of charged atoms or small charged molecules into out of within or between cells. www.broad.mit.e...
Broad MONOVALENT_INORGANIC_CATION_TRANSPORT View Gene Set 1.04e-07 92 1.225e-05 7 Genes annotated by the GO term GO:0015672. The directed movement of inorganic cations with a valency of one into out of within or between cells. Inorganic cations are atoms or small molecules with a positive charge which do not contain carbon in covalent linkage. www.broad.mit.e...
Broad SYNAPTIC_TRANSMISSION View Gene Set 2.336e-07 172 2.409e-05 8 Genes annotated by the GO term GO:0007268. The process of communication from a neuron to a target (neuron muscle or secretory cell) across a synapse. www.broad.mit.e...
Broad CATION_TRANSPORT View Gene Set 4.075e-07 145 3.735e-05 9 Genes annotated by the GO term GO:0006812. The directed movement of cations atoms or small molecules with a net positive charge into out of within or between cells. www.broad.mit.e...
Broad TRANSMISSION_OF_NERVE_IMPULSE View Gene Set 1.075e-06 187 8.866e-05 10 Genes annotated by the GO term GO:0019226. The sequential electrochemical polarization and depolarization that travels across the membrane of a nerve cell (neuron) in response to stimulation. www.broad.mit.e...
Broad ANATOMICAL_STRUCTURE_DEVELOPMENT View Gene Set 1.346e-06 1004 0.000101 11 Genes annotated by the GO term GO:0048856. The biological process whose specific outcome is the progression of an anatomical structure from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure whatever form that may be including its natural destruction. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel or microscopic such as an acrosome. www.broad.mit.e...
Broad NEUROLOGICAL_SYSTEM_PROCESS View Gene Set 5.78e-06 377 0.0003974 12 Genes annotated by the GO term GO:0050877. The processes pertaining to the functions of the nervous system of an organism. www.broad.mit.e...
Broad TRANSPORT View Gene Set 8.734e-06 777 0.0005543 13 Genes annotated by the GO term GO:0006810. The directed movement of substances (such as macromolecules small molecules ions) into out of within or between cells. www.broad.mit.e...
Broad REGULATION_OF_BIOLOGICAL_QUALITY View Gene Set 1.219e-05 406 0.0005595 14 Genes annotated by the GO term GO:0065008. Any process that modulates the frequency rate or extent of a biological quality. A biological quality is a measurable attribute of an organism or part of an organism such as size mass shape color etc. www.broad.mit.e...
Broad SYSTEM_DEVELOPMENT View Gene Set 9.794e-06 853 0.0005595 14 Genes annotated by the GO term GO:0048731. The process whose specific outcome is the progression of an organismal system over time from its formation to the mature structure. A system is a regularly interacting or interdependent group of organs or tissues that work together to carry out a given biological process. www.broad.mit.e...
Broad ESTABLISHMENT_OF_LOCALIZATION View Gene Set 1.221e-05 851 0.0005595 14 Genes annotated by the GO term GO:0051234. The directed movement of a cell substance or cellular entity such as a protein complex or organelle to a specific location. www.broad.mit.e...
Broad RESPONSE_TO_EXTERNAL_STIMULUS View Gene Set 1.183e-05 305 0.0005595 14 Genes annotated by the GO term GO:0009605. A change in state or activity of a cell or an organism (in terms of movement secretion enzyme production gene expression etc.) as a result of an external stimulus. www.broad.mit.e...
Broad POTASSIUM_ION_TRANSPORT View Gene Set 1.047e-05 58 0.0005595 14 Genes annotated by the GO term GO:0006813. The directed movement of potassium ions (K+) into out of within or between cells. www.broad.mit.e...
Broad IMMUNE_RESPONSE View Gene Set 1.343e-05 232 0.0005833 19 Genes annotated by the GO term GO:0006955. Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat. www.broad.mit.e...
Broad SECOND_MESSENGER_MEDIATED_SIGNALING View Gene Set 1.577e-05 146 0.0006504 20 Genes annotated by the GO term GO:0019932. A series of molecular signals in which an ion or small molecule is formed or released into the cytosol thereby helping relay the signal within the cell. www.broad.mit.e...
Broad IMMUNE_SYSTEM_PROCESS View Gene Set 2.303e-05 326 0.0009048 21 Genes annotated by the GO term GO:0002376. Any process involved in the development or functioning of the immune system an organismal system for calibrated responses to potential internal or invasive threats. www.broad.mit.e...
Broad G_PROTEIN_SIGNALING_COUPLED_TO_CYCLIC_NUCLEOTIDE_SECOND_MESSENGER View Gene Set 2.92e-05 98 0.001095 22 Genes annotated by the GO term GO:0007187. The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand followed by modulation of a nucleotide cyclase activity and a subsequent change in the concentration of a cyclic nucleotide. www.broad.mit.e...
Broad CYCLIC_NUCLEOTIDE_MEDIATED_SIGNALING View Gene Set 3.342e-05 100 0.001199 23 Genes annotated by the GO term GO:0019935. A series of molecular signals in which a cell uses a cyclic nucleotide to convert an extracellular signal into a response. www.broad.mit.e...
Broad RESPONSE_TO_WOUNDING View Gene Set 3.815e-05 184 0.001311 24 Genes annotated by the GO term GO:0009611. A change in state or activity of a cell or an organism (in terms of movement secretion enzyme production gene expression etc.) as a result of a stimulus indicating damage to the organism. www.broad.mit.e...
Broad MULTICELLULAR_ORGANISMAL_DEVELOPMENT View Gene Set 6.077e-05 1037 0.002005 25 Genes annotated by the GO term GO:0007275. The biological process whose specific outcome is the progression of an organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult). www.broad.mit.e...
Broad METAL_ION_TRANSPORT View Gene Set 7.322e-05 116 0.002323 26 Genes annotated by the GO term GO:0030001. The directed movement of metal ions any metal ion with an electric charge into out of within or between cells. www.broad.mit.e...
Broad DEFENSE_RESPONSE View Gene Set 0.0001266 264 0.00387 27 Genes annotated by the GO term GO:0006952. Reactions triggered in response to the presence of a foreign body or the occurrence of an injury which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack. www.broad.mit.e...
Broad DETECTION_OF_STIMULUS View Gene Set 0.0002083 47 0.006136 28 Genes annotated by the GO term GO:0051606. The series of events in which a stimulus is received by a cell and converted into a molecular signal. www.broad.mit.e...
Broad INTRACELLULAR_SIGNALING_CASCADE View Gene Set 0.0002159 648 0.006143 29 Genes annotated by the GO term GO:0007242. A series of reactions within the cell that occur as a result of a single trigger reaction or compound. www.broad.mit.e...
Broad INFLAMMATORY_RESPONSE View Gene Set 0.0004544 124 0.0125 30 Genes annotated by the GO term GO:0006954. The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages. www.broad.mit.e...
Broad EXCRETION View Gene Set 0.0005846 36 0.01556 31 Genes annotated by the GO term GO:0007588. The elimination by an organism of the waste products that arise as a result of metabolic activity. These products include water carbon dioxide (CO2) and nitrogenous compounds. www.broad.mit.e...
Broad ANATOMICAL_STRUCTURE_MORPHOGENESIS View Gene Set 0.0007109 375 0.01833 32 Genes annotated by the GO term GO:0009653. The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form. www.broad.mit.e...
Broad TRANSMEMBRANE_RECEPTOR_PROTEIN_TYROSINE_KINASE_SIGNALING_PATHWAY View Gene Set 0.0008663 82 0.02102 33 Genes annotated by the GO term GO:0007169. The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand. www.broad.mit.e...
Broad SMALL_GTPASE_MEDIATED_SIGNAL_TRANSDUCTION View Gene Set 0.0008623 89 0.02102 33 Genes annotated by the GO term GO:0007264. Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals. www.broad.mit.e...
Broad NERVOUS_SYSTEM_DEVELOPMENT View Gene Set 0.001308 380 0.0297 35 Genes annotated by the GO term GO:0007399. The process whose specific outcome is the progression of nervous tissue over time from its formation to its mature state. www.broad.mit.e...
Broad CARBOXYLIC_ACID_METABOLIC_PROCESS View Gene Set 0.001332 173 0.0297 35 Genes annotated by the GO term GO:0019752. The chemical reactions and pathways involving carboxylic acids any organic acid containing one or more carboxyl (COOH) groups or anions (COO-). www.broad.mit.e...
Broad CHEMICAL_HOMEOSTASIS View Gene Set 0.001282 151 0.0297 35 Genes annotated by the GO term GO:0048878. The biological processes involved in the maintenance of an internal equilibrium of a chemical. www.broad.mit.e...
Broad ORGANIC_ACID_METABOLIC_PROCESS View Gene Set 0.001424 175 0.03092 38 Genes annotated by the GO term GO:0006082. The chemical reactions and pathways involving organic acids any acidic compound containing carbon in covalent linkage. www.broad.mit.e...
Broad ORGAN_DEVELOPMENT View Gene Set 0.001491 567 0.03153 39 Genes annotated by the GO term GO:0048513. Development of a tissue or tissues that work together to perform a specific function or functions. Development pertains to the process whose specific outcome is the progression of a structure over time from its formation to the mature structure. Organs are commonly observed as visibly distinct structures but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions. www.broad.mit.e...
Broad ENZYME_LINKED_RECEPTOR_PROTEIN_SIGNALING_PATHWAY View Gene Set 0.001852 139 0.03802 40 Genes annotated by the GO term GO:0007167. Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell where the receptor possesses catalytic activity or is closely associated with an enzyme such as a protein kinase. www.broad.mit.e...
Broad CALCIUM_INDEPENDENT_CELL_CELL_ADHESION View Gene Set 0.001889 22 0.03802 40 Genes annotated by the GO term GO:0016338. The attachment of one cell to another cell via adhesion molecules that do not require the presence of calcium for the interaction. www.broad.mit.e...
Broad CELL_CELL_ADHESION View Gene Set 0.002012 86 0.03953 42 Genes annotated by the GO term GO:0016337. The attachment of one cell to another cell via adhesion molecules. www.broad.mit.e...
Broad TISSUE_DEVELOPMENT View Gene Set 0.002176 137 0.04175 43 Genes annotated by the GO term GO:0009888. The process whose specific outcome is the progression of a tissue over time from its formation to the mature structure. www.broad.mit.e...
Broad HOMEOSTATIC_PROCESS View Gene Set 0.002428 202 0.04553 44 Genes annotated by the GO term GO:0042592. The biological processes involved in the maintenance of an internal equilibrium. www.broad.mit.e...
Broad CELLULAR_HOMEOSTASIS View Gene Set 0.00254 141 0.04657 45 Genes annotated by the GO term GO:0019725. The processes involved in the maintenance of an internal equilibrium at the level of the cell. www.broad.mit.e...

Gene Set Collection: Broad.c5.CC

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad PLASMA_MEMBRANE View Gene Set 2.133e-44 1392 4.97e-42 1 Genes annotated by the GO term GO:0005886. The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. www.broad.mit.e...
Broad PLASMA_MEMBRANE_PART View Gene Set 9.747e-44 1142 1.135e-41 2 Genes annotated by the GO term GO:0044459. Any constituent part of the plasma membrane the membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. www.broad.mit.e...
Broad INTRINSIC_TO_PLASMA_MEMBRANE View Gene Set 2.862e-40 978 2.223e-38 3 Genes annotated by the GO term GO:0031226. Located in the plasma membrane such that some covalently attached portion of the gene product for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor spans or is embedded in one or both leaflets of the membrane. www.broad.mit.e...
Broad INTEGRAL_TO_PLASMA_MEMBRANE View Gene Set 1.996e-39 964 1.163e-37 4 Genes annotated by the GO term GO:0005887. Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. www.broad.mit.e...
Broad INTRINSIC_TO_MEMBRANE View Gene Set 1.545e-36 1319 7.198e-35 5 Genes annotated by the GO term GO:0031224. Located in a membrane such that some covalently attached portion of the gene product for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor spans or is embedded in one or both leaflets of the membrane. www.broad.mit.e...
Broad INTEGRAL_TO_MEMBRANE View Gene Set 2.329e-35 1301 9.043e-34 6 Genes annotated by the GO term GO:0016021. Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein indicates that all or part of the peptide sequence is embedded in the membrane. www.broad.mit.e...
Broad MEMBRANE_PART View Gene Set 2.078e-31 1632 6.918e-30 7 Genes annotated by the GO term GO:0044425. Any constituent part of a membrane a double layer of lipid molecules that encloses all cells and in eukaryotes many organelles; may be a single or double lipid bilayer; also includes associated proteins. www.broad.mit.e...
Broad MEMBRANE View Gene Set 2.923e-30 1939 8.513e-29 8 Genes annotated by the GO term GO:0016020. Double layer of lipid molecules that encloses all cells and in eukaryotes many organelles; may be a single or double lipid bilayer; also includes associated proteins. www.broad.mit.e...
Broad CELL_FRACTION View Gene Set 3.627e-08 484 9.391e-07 9 Genes annotated by the GO term GO:0000267. A generic term for parts of cells prepared by disruptive biochemical techniques. www.broad.mit.e...
Broad MEMBRANE_FRACTION View Gene Set 8.259e-08 333 1.924e-06 10 Genes annotated by the GO term GO:0005624. That fraction of cells prepared by disruptive biochemical methods that includes the plasma and other membranes. www.broad.mit.e...
Broad EXTRACELLULAR_REGION View Gene Set 0.0002369 437 0.005018 11 Genes annotated by the GO term GO:0005576. The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite. www.broad.mit.e...
Broad VOLTAGE_GATED_POTASSIUM_CHANNEL_COMPLEX View Gene Set 0.000876 40 0.01701 12 Genes annotated by the GO term GO:0008076. A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential. www.broad.mit.e...
Broad VESICULAR_FRACTION View Gene Set 0.001648 43 0.0256 13 Genes annotated by the GO term GO:0042598. Any of the small heterogeneous artifactual vesicular particles that are formed when some cells are homogenized. www.broad.mit.e...
Broad MICROSOME View Gene Set 0.001648 41 0.0256 13 Genes annotated by the GO term GO:0005792. Any of the small heterogeneous artifactual vesicular particles 50-150 nm in diameter that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g. www.broad.mit.e...
Broad CLATHRIN_COATED_VESICLE View Gene Set 0.00154 35 0.0256 13 Genes annotated by the GO term GO:0030136. A vesicle with a coat formed of clathrin connected to the membrane via one of the clathrin adaptor complexes. www.broad.mit.e...
Broad EXTRACELLULAR_REGION_PART View Gene Set 0.00246 331 0.03582 16 Genes annotated by the GO term GO:0044421. Any constituent part of the extracellular region the space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers constituent parts of the host cell environment outside an intracellular parasite. www.broad.mit.e...
Broad ACTIN_CYTOSKELETON View Gene Set 0.002823 127 0.03854 17 Genes annotated by the GO term GO:0015629. The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes. www.broad.mit.e...
Broad INTEGRIN_COMPLEX View Gene Set 0.002978 19 0.03854 17 Genes annotated by the GO term GO:0008305. Any member of a family of heterodimeric transmembrane receptors for cell-adhesion molecules. The alpha and beta subunits are noncovalently bonded. www.broad.mit.e...

Gene Set Collection: Broad.c5.MF

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad RECEPTOR_ACTIVITY View Gene Set 3.205e-20 572 1.269e-17 1 Genes annotated by the GO term GO:0004872. Combining with an extracellular or intracellular messenger to initiate a change in cell activity. www.broad.mit.e...
Broad TRANSMEMBRANE_RECEPTOR_ACTIVITY View Gene Set 6.446e-16 411 1.276e-13 2 Genes annotated by the GO term GO:0004888. Combining with an extracellular or intracellular messenger to initiate a change in cell activity and spanning to the membrane of either the cell or an organelle. www.broad.mit.e...
Broad ION_TRANSMEMBRANE_TRANSPORTER_ACTIVITY View Gene Set 1.503e-10 275 1.984e-08 3 Genes annotated by the GO term GO:0015075. Catalysis of the transfer of an ion from one side of a membrane to the other. www.broad.mit.e...
Broad SUBSTRATE_SPECIFIC_CHANNEL_ACTIVITY View Gene Set 5.339e-10 154 5.285e-08 4 Genes annotated by the GO term GO:0022838. Catalysis of energy-independent facilitated diffusion mediated by passage of a specific solute through a transmembrane aqueous pore or channel. Stereospecificity is not exhibited but this transport may be specific for a particular molecular species or class of molecules. www.broad.mit.e...
Broad SUBSTRATE_SPECIFIC_TRANSPORTER_ACTIVITY View Gene Set 1.438e-09 389 9.491e-08 5 Genes annotated by the GO term GO:0022892. Enables the directed movement of a specific substance or group of related substances (such as macromolecules small molecules ions) into out of within or between cells. www.broad.mit.e...
Broad TRANSMEMBRANE_TRANSPORTER_ACTIVITY View Gene Set 1.362e-09 371 9.491e-08 5 Genes annotated by the GO term GO:0022857. Catalysis of the transfer of a substance from one side of a membrane to the other. www.broad.mit.e...
Broad SUBSTRATE_SPECIFIC_TRANSMEMBRANE_TRANSPORTER_ACTIVITY View Gene Set 9.315e-09 341 5.27e-07 7 Genes annotated by the GO term GO:0022891. Catalysis of the transfer of a specific substance or group of related substances from one side of a membrane to the other. www.broad.mit.e...
Broad CATION_TRANSMEMBRANE_TRANSPORTER_ACTIVITY View Gene Set 1.083e-08 211 5.363e-07 8 Genes annotated by the GO term GO:0008324. Catalysis of the transfer of cation from one side of the membrane to the other. www.broad.mit.e...
Broad ION_CHANNEL_ACTIVITY View Gene Set 1.72e-08 147 7.568e-07 9 Genes annotated by the GO term GO:0005216. Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism. www.broad.mit.e...
Broad G_PROTEIN_COUPLED_RECEPTOR_ACTIVITY View Gene Set 7.287e-08 185 2.886e-06 10 Genes annotated by the GO term GO:0004930. A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers. www.broad.mit.e...
Broad GATED_CHANNEL_ACTIVITY View Gene Set 1.028e-07 121 3.7e-06 11 Genes annotated by the GO term GO:0022836. Catalysis of the transmembrane transfer of a solute by a channel that opens in response to a specific stimulus. www.broad.mit.e...
Broad METAL_ION_TRANSMEMBRANE_TRANSPORTER_ACTIVITY View Gene Set 5.071e-07 145 1.673e-05 12 Genes annotated by the GO term GO:0046873. Catalysis of the transfer of metal ions from one side of a membrane to the other. www.broad.mit.e...
Broad CATION_CHANNEL_ACTIVITY View Gene Set 8.183e-07 118 2.493e-05 13 Genes annotated by the GO term GO:0005261. Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient. www.broad.mit.e...
Broad RHODOPSIN_LIKE_RECEPTOR_ACTIVITY View Gene Set 3.488e-06 131 9.866e-05 14 Genes annotated by the GO term GO:0001584. A G-protein coupled receptor that is structurally/functionally related to the rhodopsin receptor. www.broad.mit.e...
Broad PHOSPHOTRANSFERASE_ACTIVITY_ALCOHOL_GROUP_AS_ACCEPTOR View Gene Set 6.524e-06 326 0.0001722 15 Genes annotated by the GO term GO:0016773. Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor). www.broad.mit.e...
Broad VOLTAGE_GATED_CHANNEL_ACTIVITY View Gene Set 1.516e-05 73 0.0003753 16 Genes annotated by the GO term GO:0022832. Catalysis of the transmembrane transfer of a solute by a channel whose open state is dependent on the voltage across the membrane in which it is embedded. www.broad.mit.e...
Broad KINASE_ACTIVITY View Gene Set 2.345e-05 359 0.0005462 17 Genes annotated by the GO term GO:0016301. Catalysis of the transfer of a phosphate group usually from ATP to a substrate molecule. www.broad.mit.e...
Broad PROTEIN_KINASE_ACTIVITY View Gene Set 3.042e-05 278 0.0006692 18 Genes annotated by the GO term GO:0004672. Catalysis of the phosphorylation of an amino acid residue in a protein usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. www.broad.mit.e...
Broad VOLTAGE_GATED_CATION_CHANNEL_ACTIVITY View Gene Set 3.469e-05 66 0.000723 19 Genes annotated by the GO term GO:0022843. Catalysis of the transmembrane transfer of a cation by a voltage-gated channel. A cation is a positively charged ion. www.broad.mit.e...
Broad LIPASE_ACTIVITY View Gene Set 7.451e-05 49 0.001382 20 Genes annotated by the GO term GO:0016298. Catalysis of the hydrolysis of a lipid or phospholipid. www.broad.mit.e...
Broad POTASSIUM_CHANNEL_ACTIVITY View Gene Set 7.621e-05 50 0.001382 20 Genes annotated by the GO term GO:0005267. Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism. www.broad.mit.e...
Broad TRANSMEMBRANE_RECEPTOR_PROTEIN_TYROSINE_KINASE_ACTIVITY View Gene Set 7.677e-05 43 0.001382 20 Genes annotated by the GO term GO:0004714. Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate to initiate a change in cell activity. www.broad.mit.e...
Broad TRANSMEMBRANE_RECEPTOR_PROTEIN_KINASE_ACTIVITY View Gene Set 9.773e-05 51 0.001678 23 Genes annotated by the GO term GO:0019199. www.broad.mit.e...
Broad PROTEIN_TYROSINE_KINASE_ACTIVITY View Gene Set 0.0001017 64 0.001678 23 Genes annotated by the GO term GO:0004713. Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate. www.broad.mit.e...
Broad STRUCTURAL_MOLECULE_ACTIVITY View Gene Set 0.000136 243 0.002155 25 Genes annotated by the GO term GO:0005198. The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell. www.broad.mit.e...
Broad RECEPTOR_SIGNALING_PROTEIN_ACTIVITY View Gene Set 0.000222 82 0.003381 26 Genes annotated by the GO term GO:0005057. www.broad.mit.e...
Broad STRUCTURAL_CONSTITUENT_OF_CYTOSKELETON View Gene Set 0.0003274 57 0.004802 27 Genes annotated by the GO term GO:0005200. The action of a molecule that contributes to the structural integrity of a cytoskeletal structure. www.broad.mit.e...
Broad ANION_TRANSMEMBRANE_TRANSPORTER_ACTIVITY View Gene Set 0.0003576 59 0.005057 28 Genes annotated by the GO term GO:0008509. Catalysis of the transfer of a negatively charged ion from one side of a membrane to the other. www.broad.mit.e...
Broad POTASSIUM_CHANNEL_REGULATOR_ACTIVITY View Gene Set 0.0005185 13 0.00708 29 Genes annotated by the GO term GO:0015459. www.broad.mit.e...
Broad NEUROTRANSMITTER_RECEPTOR_ACTIVITY View Gene Set 0.0007081 50 0.009347 30 Genes annotated by the GO term GO:0030594. Combining with a neurotransmitter to initiate a change in cell activity. www.broad.mit.e...
Broad VOLTAGE_GATED_POTASSIUM_CHANNEL_ACTIVITY View Gene Set 0.0007794 36 0.009645 31 Genes annotated by the GO term GO:0005249. Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel. www.broad.mit.e...
Broad PHOSPHOLIPASE_ACTIVITY View Gene Set 0.0007652 41 0.009645 31 Genes annotated by the GO term GO:0004620. Catalysis of the hydrolysis of a glycerophospholipid. www.broad.mit.e...
Broad CHANNEL_REGULATOR_ACTIVITY View Gene Set 0.001033 23 0.0124 33 Genes annotated by the GO term GO:0016247. www.broad.mit.e...
Broad EXCITATORY_EXTRACELLULAR_LIGAND_GATED_ION_CHANNEL_ACTIVITY View Gene Set 0.001232 21 0.01319 34 Genes annotated by the GO term GO:0005231. www.broad.mit.e...
Broad NEUROTRANSMITTER_BINDING View Gene Set 0.001177 53 0.01319 34 Genes annotated by the GO term GO:0042165. Interacting selectively with a neurotransmitter any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell. www.broad.mit.e...
Broad EXTRACELLULAR_LIGAND_GATED_ION_CHANNEL_ACTIVITY View Gene Set 0.001232 21 0.01319 34 Genes annotated by the GO term GO:0005230. Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts. www.broad.mit.e...
Broad TRANSFERASE_ACTIVITY_TRANSFERRING_PHOSPHORUS_CONTAINING_GROUPS View Gene Set 0.001199 414 0.01319 34 Genes annotated by the GO term GO:0016772. Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor). www.broad.mit.e...
Broad PEPTIDE_RECEPTOR_ACTIVITY View Gene Set 0.00131 50 0.01338 38 Genes annotated by the GO term GO:0001653. Combining with an extracellular or intracellular peptide to initiate a change in cell activity. www.broad.mit.e...
Broad AUXILIARY_TRANSPORT_PROTEIN_ACTIVITY View Gene Set 0.001318 25 0.01338 38 Genes annotated by the GO term GO:0015457. Facilitates transport across one or more biological membranes but do not themselves participate directly in transport. These proteins always function in conjunction with one or more established transport systems. They may provide a function connected with energy coupling to transport play a structural role in complex formation serve a biogenic or stability function or function in regulation. www.broad.mit.e...
Broad SERINE_HYDROLASE_ACTIVITY View Gene Set 0.001547 44 0.01531 40 Genes annotated by the GO term GO:0017171. Catalysis of the hydrolysis of a substrate by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). www.broad.mit.e...
Broad ACTIVE_TRANSMEMBRANE_TRANSPORTER_ACTIVITY View Gene Set 0.001748 122 0.01689 41 Genes annotated by the GO term GO:0022804. Catalysis of the transfer of a specific substance or related group of substances from one side of a membrane to the other up the solute's concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction. www.broad.mit.e...
Broad MAP_KINASE_ACTIVITY View Gene Set 0.00223 12 0.01932 42 Genes annotated by the GO term GO:0004707. Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters but weak (in most cell backgrounds) by stress stimuli. www.broad.mit.e...
Broad SYMPORTER_ACTIVITY View Gene Set 0.002236 31 0.01932 42 Genes annotated by the GO term GO:0015293. Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. www.broad.mit.e...
Broad LIPOPROTEIN_BINDING View Gene Set 0.002244 18 0.01932 42 Genes annotated by the GO term GO:0008034. Interacting selectively with any conjugated water-soluble protein in which the nonprotein moiety consists of a lipid or lipids. www.broad.mit.e...
Broad PHOSPHOLIPID_BINDING View Gene Set 0.002202 41 0.01932 42 Genes annotated by the GO term GO:0005543. Interacting selectively with phospholipids a class of lipids containing phosphoric acid as a mono- or diester. www.broad.mit.e...
Broad SERINE_TYPE_ENDOPEPTIDASE_ACTIVITY View Gene Set 0.002188 39 0.01932 42 Genes annotated by the GO term GO:0004252. Catalysis of the hydrolysis of nonterminal peptide linkages in oligopeptides or polypeptides by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). www.broad.mit.e...
Broad ACETYLCHOLINE_BINDING View Gene Set 0.002537 17 0.02124 47 Genes annotated by the GO term GO:0042166. Interacting selectively with acetylcholine an acetic acid ester of the organic base choline that functions as a neurotransmitter released at the synapses of parasympathetic nerves and at neuromuscular junctions. www.broad.mit.e...
Broad CARBOXYLESTERASE_ACTIVITY View Gene Set 0.002574 32 0.02124 47 Genes annotated by the GO term GO:0004091. Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion. www.broad.mit.e...
Broad SERINE_TYPE_PEPTIDASE_ACTIVITY View Gene Set 0.003044 43 0.02375 49 Genes annotated by the GO term GO:0008236. Catalysis of the hydrolysis of peptide linkages in oligopeptides or polypeptides by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). www.broad.mit.e...
Broad ANION_CATION_SYMPORTER_ACTIVITY View Gene Set 0.002983 16 0.02375 49 Genes annotated by the GO term GO:0015296. Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: anion(out) + cation(out) = anion(in) + cation(in). www.broad.mit.e...
Broad MOLECULAR_ADAPTOR_ACTIVITY View Gene Set 0.003059 49 0.02375 49 Genes annotated by the GO term GO:0060090. The binding activity of a molecule that brings together two or more molecules permitting those molecules to function in a coordinated way. www.broad.mit.e...
Broad INWARD_RECTIFIER_POTASSIUM_CHANNEL_ACTIVITY View Gene Set 0.003199 12 0.02436 52 Genes annotated by the GO term GO:0005242. www.broad.mit.e...
Broad ENZYME_REGULATOR_ACTIVITY View Gene Set 0.003506 315 0.0262 53 Genes annotated by the GO term GO:0030234. Modulates the activity of an enzyme. www.broad.mit.e...
Broad LIPID_BINDING View Gene Set 0.004867 76 0.03569 54 Genes annotated by the GO term GO:0008289. Interacting selectively with a lipid. www.broad.mit.e...
Broad LIGAND_GATED_CHANNEL_ACTIVITY View Gene Set 0.005081 39 0.03658 55 Genes annotated by the GO term GO:0022834. Catalysis of the transmembrane transfer of a solute by a channel that opens when a specific ligand has been bound by the channel complex or one of its constituent parts. www.broad.mit.e...
Broad PROTEASE_INHIBITOR_ACTIVITY View Gene Set 0.005189 41 0.03669 56 Genes annotated by the GO term GO:0030414. Stops prevents or reduces the activity of a protease any enzyme catalyzes the hydrolysis peptide bonds. www.broad.mit.e...
Broad CALCIUM_ION_BINDING View Gene Set 0.005528 100 0.03841 57 Genes annotated by the GO term GO:0005509. Interacting selectively with calcium ions (Ca2+). www.broad.mit.e...
Broad CARBONATE_DEHYDRATASE_ACTIVITY View Gene Set 0.005876 13 0.04012 58 Genes annotated by the GO term GO:0004089. Catalysis of the reaction: H2CO3 = CO2 + H2O. www.broad.mit.e...
Broad VOLTAGE_GATED_CALCIUM_CHANNEL_ACTIVITY View Gene Set 0.006157 18 0.04133 59 Genes annotated by the GO term GO:0005245. Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel. www.broad.mit.e...
Broad AMINE_RECEPTOR_ACTIVITY View Gene Set 0.006357 34 0.04196 60 Genes annotated by the GO term GO:0008227. Combining with a biogenic amine to initiate a change in cell activity. www.broad.mit.e...
Broad STRUCTURAL_CONSTITUENT_OF_MUSCLE View Gene Set 0.006636 32 0.04308 61 Genes annotated by the GO term GO:0008307. The action of a molecule that contributes to the structural integrity of a muscle fiber. www.broad.mit.e...
Broad CARBOHYDRATE_BINDING View Gene Set 0.007461 72 0.04698 62 Genes annotated by the GO term GO:0030246. Interacting selectively with any carbohydrate. www.broad.mit.e...
Broad RECEPTOR_SIGNALING_PROTEIN_SERINE_THREONINE_KINASE_ACTIVITY View Gene Set 0.007473 34 0.04698 62 Genes annotated by the GO term GO:0004702. www.broad.mit.e...
Broad PHOSPHORIC_DIESTER_HYDROLASE_ACTIVITY View Gene Set 0.007666 39 0.04744 64 Genes annotated by the GO term GO:0008081. Catalysis of the hydrolysis of a phosphodiester to give a phosphomonoester and a free hydroxyl group. www.broad.mit.e...

Gene Set Collection: PMID

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
PMID 20237496 View Gene Set 2.679e-15 828 6.715e-12 1 New genetic associations detected in a host response study to hepatitis B vaccine. www.ncbi.nlm.ni...
PMID 19156168 View Gene Set 5.108e-08 118 5.011e-05 2 Pharmacogenetics of antipsychotic response in the CATIE trial: a candidate gene analysis. www.ncbi.nlm.ni...
PMID 19423540 View Gene Set 7.995e-08 209 5.011e-05 2 Common variation in genes related to innate immunity and risk of adult glioma. www.ncbi.nlm.ni...
PMID 20406964 View Gene Set 7.995e-08 209 5.011e-05 2 Risk of meningioma and common variation in genes related to innate immunity. www.ncbi.nlm.ni...
PMID 16335952 View Gene Set 2.259e-07 257 7.079e-05 5 Human plasma N-glycoproteome analysis by immunoaffinity subtraction hydrazide chemistry and mass spectrometry. www.ncbi.nlm.ni...
PMID 18240029 View Gene Set 1.978e-07 203 7.079e-05 5 Reviews in molecular biology and biotechnology: transmembrane signaling by G protein-coupled receptors. www.ncbi.nlm.ni...
PMID 20438785 View Gene Set 1.434e-07 208 7.079e-05 5 Polymorphisms in innate immunity genes and risk of childhood leukemia. www.ncbi.nlm.ni...
PMID 7539755 View Gene Set 2.13e-07 21 7.079e-05 5 Modulation of CD4 lateral interaction with lymphocyte surface molecules induced by HIV-1 gp120. www.ncbi.nlm.ni...
PMID 19086053 View Gene Set 5.829e-07 301 0.0001624 9 Identification of new putative susceptibility genes for several psychiatric disorders by association analysis of regulatory and non-synonymous SNPs of 306 genes involved in neurotransmission and neurodevelopment. www.ncbi.nlm.ni...
PMID 19851445 View Gene Set 7.91e-07 176 0.0001983 10 High-density SNP screening of the major histocompatibility complex in systemic lupus erythematosus demonstrates strong evidence for independent susceptibility regions. www.ncbi.nlm.ni...
PMID 19367581 View Gene Set 1.475e-06 62 0.0003232 11 Identification of neuroglycan C and interacting partners as potential susceptibility genes for schizophrenia in a Southern Chinese population. www.ncbi.nlm.ni...
PMID 20424473 View Gene Set 1.547e-06 146 0.0003232 11 L-type voltage-dependent calcium channel alpha subunit 1C is a novel candidate gene associated with secondary hyperparathyroidism: an application of haplotype-based analysis for multiple linked single nucleotide polymorphisms. www.ncbi.nlm.ni...
PMID 19861144 View Gene Set 2.512e-06 21 0.0004498 13 Activating killer cell immunoglobulin-like receptors 3DS1 and 2DS1 protect against developing the severe form of recurrent respiratory papillomatosis. www.ncbi.nlm.ni...
PMID 20492596 View Gene Set 2.512e-06 22 0.0004498 13 Distribution of KIR genes in the population of unrelated individuals homozygous for ancestral haplotype AH8.1 (HLA-A1B8DR3). www.ncbi.nlm.ni...
PMID 19874574 View Gene Set 2.695e-06 130 0.0004504 15 Genetical genomic determinants of alcohol consumption in rats and humans. www.ncbi.nlm.ni...
PMID 19493232 View Gene Set 3.484e-06 15 0.0005138 16 Killer immunoglobulin-like receptors (KIR2DL2 and/or KIR2DS2) in presence of their ligand (HLA-C1 group) protect against chronic myeloid leukaemia. www.ncbi.nlm.ni...
PMID 19850842 View Gene Set 3.484e-06 15 0.0005138 16 Killer cell immunoglobulin-like receptors in HLA-B27-associated acute anterior uveitis with and without axial spondyloarthropathy. www.ncbi.nlm.ni...
PMID 17868255 View Gene Set 6.167e-06 16 0.0005331 18 No association of KIR genes with Behcet's disease. www.ncbi.nlm.ni...
PMID 18571006 View Gene Set 5.597e-06 19 0.0005331 18 KIR and HLA gene combinations in Vogt-Koyanagi-Harada disease. www.ncbi.nlm.ni...
PMID 18778326 View Gene Set 5.597e-06 19 0.0005331 18 Association between killer-cell immunoglobulin-like receptor genotypes and leprosy in Brazil. www.ncbi.nlm.ni...
PMID 18848853 View Gene Set 5.597e-06 19 0.0005331 18 Killer cell immunoglobulin-like receptor gene diversity in a Southern Brazilian population from the state of ParanĂ¡. www.ncbi.nlm.ni...
PMID 19169284 View Gene Set 6.167e-06 17 0.0005331 18 KIR genes and KIR ligands affect occurrence of acute GVHD after unrelated 12/12 HLA matched hematopoietic stem cell transplantation. www.ncbi.nlm.ni...
PMID 19630074 View Gene Set 5.597e-06 18 0.0005331 18 Killer immunoglobulin-like receptor ligand HLA-Bw4 protects against multiple sclerosis. www.ncbi.nlm.ni...
PMID 19846535 View Gene Set 6.167e-06 18 0.0005331 18 Effect of killer immunoglobulin-like receptors in the response to combined treatment in patients with chronic hepatitis C virus infection. www.ncbi.nlm.ni...
PMID 19968064 View Gene Set 5.597e-06 17 0.0005331 18 [Effects of killer immunoglobulin-like receptor and human leukocyte antigen class I ligand on the prognosis of related donor hematopoitic stem cell transplantation]. www.ncbi.nlm.ni...
PMID 20173784 View Gene Set 5.01e-06 17 0.0005331 18 The beneficial impact of missing KIR ligands and absence of donor KIR2DS3 gene on outcome following unrelated hematopoietic SCT for myeloid leukemia in the Chinese population. www.ncbi.nlm.ni...
PMID 20173792 View Gene Set 5.597e-06 17 0.0005331 18 The role of killer immunoglobulin-like receptor haplotypes on the outcome of unrelated donor haematopoietic SCT for thalassaemia. www.ncbi.nlm.ni...
PMID 20193031 View Gene Set 5.597e-06 20 0.0005331 18 Compound KIR-HLA genotype analyses in the Iranian population by a novel PCR-SSP assay. www.ncbi.nlm.ni...
PMID 20519398 View Gene Set 5.597e-06 18 0.0005331 18 Influence of HLA class I and HLA-KIR compound genotypes on HIV-2 infection and markers of disease progression in a Manjako community in West Africa. www.ncbi.nlm.ni...
PMID 19032228 View Gene Set 6.443e-06 17 0.0005384 30 Natural killer cell receptor repertoire and their ligands and the risk of CMV infection after kidney transplantation. www.ncbi.nlm.ni...
PMID 19120281 View Gene Set 7.515e-06 13 0.0005888 31 Different KIRs confer susceptibility and protection to adults with latent autoimmune diabetes in Latvian and Asian Indian populations. www.ncbi.nlm.ni...
PMID 19936734 View Gene Set 7.515e-06 12 0.0005888 31 Distribution of killer cell immunoglobulin-like receptors (KIR) and their HLA-C ligands in two Iranian populations. www.ncbi.nlm.ni...
PMID 10373510 View Gene Set 8.815e-06 15 0.0006697 33 Ras-specific exchange factor GRF: oligomerization through its Dbl homology domain and calcium-dependent activation of Raf. www.ncbi.nlm.ni...
PMID 20210919 View Gene Set 9.526e-06 16 0.0007024 34 HLA-DQA1*0505 sharing and killer immunoglobulin-like receptors in sub fertile couples: report from the 15th International Histocompatibility Workshop. www.ncbi.nlm.ni...
PMID 20200544 View Gene Set 9.895e-06 18 0.0007088 35 Signatures of natural selection and coevolution between killer cell immunoglobulin-like receptors (KIR) and HLA class I genes. www.ncbi.nlm.ni...
PMID 20426625 View Gene Set 1.042e-05 20 0.000726 36 HLA and KIR frequencies in Sicilian Centenarians. www.ncbi.nlm.ni...
PMID 20210918 View Gene Set 1.161e-05 18 0.0007863 37 Distribution of killer cell immunoglobulin-like receptor genes in the mestizo population from Venezuela. www.ncbi.nlm.ni...
PMID 18583979 View Gene Set 1.31e-05 52 0.0008012 38 Systematic meta-analyses and field synopsis of genetic association studies in schizophrenia: the SzGene database. www.ncbi.nlm.ni...
PMID 18643961 View Gene Set 1.304e-05 16 0.0008012 38 A study of the killer cell immunoglobulin-like receptor gene KIR2DS1 in a Caucasoid Brazilian population with psoriasis vulgaris. www.ncbi.nlm.ni...
PMID 19326408 View Gene Set 1.304e-05 15 0.0008012 38 Killer cell immunoglobulin-like receptor genotype and killer cell immunoglobulin-like receptor-human leukocyte antigen C ligand compatibility affect the severity of hepatitis C virus recurrence after liver transplantation. www.ncbi.nlm.ni...
PMID 20356536 View Gene Set 1.304e-05 15 0.0008012 38 [Killer cell immunoglobin-like receptor and its ligand gene polymorphisms in Hunan Han patients with type 1 diabetes]. www.ncbi.nlm.ni...
PMID 20331834 View Gene Set 1.379e-05 16 0.0008042 42 Report from the killer immunoglobulin-like receptor (KIR) anthropology component of the 15th International Histocompatibility Workshop: worldwide variation in the KIR loci and further evidence for the co-evolution of KIR and HLA. www.ncbi.nlm.ni...
PMID 20483367 View Gene Set 1.379e-05 16 0.0008042 42 Role of killer cell immunoglobulin-like receptor gene content and human leukocyte antigen-C group in susceptibility to human T-lymphotropic virus 1-associated myelopathy/tropical spastic paraparesis in Peru. www.ncbi.nlm.ni...
PMID 19934297 View Gene Set 1.455e-05 13 0.0008291 44 KIR and HLA genotypes are associated with disease progression and survival following autologous hematopoietic stem cell transplantation for high-risk neuroblastoma. www.ncbi.nlm.ni...
PMID 19181658 View Gene Set 1.533e-05 12 0.000854 45 Association of killer cell immunoglobulin-like receptors with primary Sjogren's syndrome. www.ncbi.nlm.ni...
PMID 20207982 View Gene Set 1.76e-05 15 0.000959 46 Natural killer-cell receptor polymorphisms and posttransplantation non-Hodgkin lymphoma. www.ncbi.nlm.ni...
PMID 15340161 View Gene Set 1.818e-05 264 0.0009679 47 Signal peptide prediction based on analysis of experimentally verified cleavage sites. www.ncbi.nlm.ni...
PMID 18687225 View Gene Set 1.892e-05 13 0.0009679 47 [Study on the polymorphism of killer cell immunoglobulin like receptor (KIR) gene with systemic lupus erythematosus of North population in China]. www.ncbi.nlm.ni...
PMID 19664392 View Gene Set 1.892e-05 11 0.0009679 47 [Genotype analysis of killer cell immunoglobulin-like receptors in Graves' disease patients]. www.ncbi.nlm.ni...
PMID 15896204 View Gene Set 3.245e-05 14 0.001257 50 Distribution of killer cell immunoglobulin-like receptor genes in the Chinese Han population. www.ncbi.nlm.ni...
PMID 18668235 View Gene Set 3.245e-05 16 0.001257 50 Asian population frequencies and haplotype distribution of killer cell immunoglobulin-like receptor (KIR) genes among Chinese Malay and Indian in Singapore. www.ncbi.nlm.ni...
PMID 19000141 View Gene Set 3.245e-05 16 0.001257 50 Diversity of killer cell immunoglobulin-like receptor genes in Indonesian populations of Java Kalimantan Timor and Irian Jaya. www.ncbi.nlm.ni...
PMID 19218127 View Gene Set 3.245e-05 17 0.001257 50 [Analysis of natural killer cell immunoglobulin-like receptor genes in Chinese]. www.ncbi.nlm.ni...
PMID 19279038 View Gene Set 3.245e-05 16 0.001257 50 Influence of activating and inhibitory killer immunoglobulin-like receptors on predisposition to recurrent miscarriages. www.ncbi.nlm.ni...
PMID 19309280 View Gene Set 3.245e-05 16 0.001257 50 Distribution of killer cell immunoglobulin-like receptor (KIR) genotypes in patients with familial Mediterranean fever. www.ncbi.nlm.ni...
PMID 19450876 View Gene Set 3.245e-05 17 0.001257 50 Killer cell immunoglobulin-like receptor gene polymorphisms in patients with leukemia: possible association with susceptibility to the disease. www.ncbi.nlm.ni...
PMID 19527230 View Gene Set 3.245e-05 16 0.001257 50 Activating killer cell immunoglobulin-like receptor genes' association with recurrent miscarriage. www.ncbi.nlm.ni...
PMID 19761533 View Gene Set 3.245e-05 17 0.001257 50 Distribution of killer-cell immunoglobulin-like receptor genes in Eastern mainland Chinese Han and Taiwanese Han populations. www.ncbi.nlm.ni...
PMID 19875891 View Gene Set 3.245e-05 14 0.001257 50 Frequencies of killer immunoglobulin-like receptor genotypes influence susceptibility to spontaneous abortion. www.ncbi.nlm.ni...
PMID 19897003 View Gene Set 3.245e-05 16 0.001257 50 Killer cell immunoglobulin-like receptor gene-cluster 3DS1-2DL5-2DS1-2DS5 predisposes susceptibility to Vogt-Koyanagi-Harada syndrome in Japanese individuals. www.ncbi.nlm.ni...
PMID 19926642 View Gene Set 3.245e-05 15 0.001257 50 Disparate distribution of activating and inhibitory killer cell immunoglobulin-like receptor genes in patients with systemic lupus erythematosus. www.ncbi.nlm.ni...
PMID 20082646 View Gene Set 3.245e-05 15 0.001257 50 Killer cell immunoglobulin-like receptor gene diversity in a Caucasian population of southern Brazil. www.ncbi.nlm.ni...
PMID 20137308 View Gene Set 3.211e-05 12 0.001257 50 [Relationship between CMV reactivation and KIR haplotype/HLA-Cw genotype in patients after unrelated-donor hematopoietic stem cell transplantation.]. www.ncbi.nlm.ni...
PMID 20468064 View Gene Set 3.26e-05 182 0.001257 50 Association study of 182 candidate genes in anorexia nervosa. www.ncbi.nlm.ni...
PMID 8615909 View Gene Set 3.076e-05 13 0.001257 50 Expression of Ca2+/calmodulin-dependent protein kinase types II and IV and reduced DNA synthesis due to the Ca2+/calmodulin-dependent protein kinase inhibitor KN-62 (1-[N O-bis(5-isoquinolinesulfonyl)-N-methyl-L-tyrosyl]-4-phenyl piperazine) in small cell lung carcinoma. www.ncbi.nlm.ni...
PMID 14622581 View Gene Set 3.909e-05 16 0.001463 66 The NMDA receptor is coupled to the ERK pathway by a direct interaction between NR2B and RasGRF1. www.ncbi.nlm.ni...
PMID 18830515 View Gene Set 3.908e-05 11 0.001463 66 Natural killer cells and immune surveillance. www.ncbi.nlm.ni...
PMID 9263011 View Gene Set 4.486e-05 20 0.001654 68 gp 120s derived from four syncytium-inducing HIV-1 strains induce different patterns of CD4 association with lymphocyte surface molecules. www.ncbi.nlm.ni...
PMID 20082482 View Gene Set 4.684e-05 29 0.001702 69 Immunogenetic characteristics of patients with autoimmune gastritis. www.ncbi.nlm.ni...
PMID 16403292 View Gene Set 5.243e-05 16 0.001851 70 [Polymorphism of killer cell immunoglobulin-like receptors gene family in Zhejiang Han population]. www.ncbi.nlm.ni...
PMID 17498266 View Gene Set 5.243e-05 15 0.001851 70 KIR genes polymorphism in Argentinean Caucasoid and Amerindian populations. www.ncbi.nlm.ni...
PMID 20371502 View Gene Set 5.969e-05 12 0.002079 72 Association of killer cell immunoglobulin-like receptor 2DL5 with systemic lupus erythematosus and accompanying infections. www.ncbi.nlm.ni...
PMID 19421224 View Gene Set 6.991e-05 14 0.002401 73 Multiple sclerosis associates with LILRA3 deletion in Spanish patients. www.ncbi.nlm.ni...
PMID 18593464 View Gene Set 7.089e-05 21 0.002402 74 Novel splice variants derived from the receptor tyrosine kinase superfamily are potential therapeutics for rheumatoid arthritis. www.ncbi.nlm.ni...
PMID 19046302 View Gene Set 7.473e-05 18 0.002498 75 Combination of KIR 2DL2 and HLA-C1 (Asn 80) confers susceptibility to type 1 diabetes in Latvians. www.ncbi.nlm.ni...
PMID 19683555 View Gene Set 8.252e-05 35 0.002722 76 Role of human leukocyte antigen killer-cell immunoglobulin-like receptors and cytokine gene polymorphisms in leptospirosis. www.ncbi.nlm.ni...
PMID 12815021 View Gene Set 0.000104 12 0.003302 77 Activation of peripheral NMDA receptors contributes to human pain and rat afferent discharges evoked by injection of glutamate into the masseter muscle. www.ncbi.nlm.ni...
PMID 18945962 View Gene Set 0.0001041 14 0.003302 77 Donors with group B KIR haplotypes improve relapse-free survival after unrelated hematopoietic cell transplantation for acute myelogenous leukemia. www.ncbi.nlm.ni...
PMID 8665664 View Gene Set 0.000104 12 0.003302 77 Developmental rearrangements of cortical glutamate-NMDA receptor binding sites in late human gestation. www.ncbi.nlm.ni...
PMID 19489269 View Gene Set 0.0001212 14 0.003798 80 [Genotype and haplotype analysis of killer cell immunoglobulin-like receptors in ankylosing spondylitis]. www.ncbi.nlm.ni...
PMID 19058789 View Gene Set 0.0001603 129 0.004962 81 A common variant in DRD3 receptor is associated with autism spectrum disorder. www.ncbi.nlm.ni...
PMID 9278385 View Gene Set 0.0001864 24 0.005631 82 The Tat protein of HIV-1 induces tumor necrosis factor-alpha production. Implications for HIV-1-associated neurological diseases. www.ncbi.nlm.ni...
PMID 9730685 View Gene Set 0.0001864 24 0.005631 82 HIV-1 tat molecular diversity and induction of TNF-alpha: implications for HIV-induced neurological disease. www.ncbi.nlm.ni...
PMID 15588985 View Gene Set 0.0002076 50 0.006197 84 Substrate-trapping techniques in the identification of cellular PTP targets. www.ncbi.nlm.ni...
PMID 20452482 View Gene Set 0.0002137 188 0.006303 85 Identification of fetal and maternal single nucleotide polymorphisms in candidate genes that predispose to spontaneous preterm labor with intact membranes. www.ncbi.nlm.ni...
PMID 19948975 View Gene Set 0.0002206 229 0.006431 86 Integrative predictive model of coronary artery calcification in atherosclerosis. www.ncbi.nlm.ni...
PMID 11048639 View Gene Set 0.0002878 29 0.008292 87 The mechanism of phospholipase C-gamma1 regulation. www.ncbi.nlm.ni...
PMID 18842294 View Gene Set 0.000312 32 0.008881 88 Association between the SERPING1 gene and age-related macular degeneration: a two-stage case-control study. www.ncbi.nlm.ni...
PMID 19336475 View Gene Set 0.0003153 76 0.008881 88 Integrated associations of genotypes with multiple blood biomarkers linked to coronary heart disease risk. www.ncbi.nlm.ni...
PMID 11504923 View Gene Set 0.0003205 15 0.008928 90 HIV envelope gp120 activates human arterial smooth muscle cells. www.ncbi.nlm.ni...
PMID 16481105 View Gene Set 0.0003249 11 0.00895 91 Effects of SDF-1alpha and gp120IIIB on apoptotic pathways in SK-N-SH neuroblastoma cells. www.ncbi.nlm.ni...
PMID 20503287 View Gene Set 0.0003308 205 0.009013 92 Interleukin-9 polymorphism in infants with respiratory syncytial virus infection: an opposite effect in boys and girls. www.ncbi.nlm.ni...
PMID 18996102 View Gene Set 0.0003581 117 0.00955 93 Physiogenomic comparison of edema and BMI in patients receiving rosiglitazone or pioglitazone. www.ncbi.nlm.ni...
PMID 19693267 View Gene Set 0.0003547 16 0.00955 93 Financial and psychological risk attitudes associated with two single nucleotide polymorphisms in the nicotine receptor (CHRNA4) gene. www.ncbi.nlm.ni...
PMID 11751963 View Gene Set 0.0003756 21 0.009912 95 Native HIV-1 Tat protein targets monocyte-derived dendritic cells and enhances their maturation function and antigen-specific T cell responses. www.ncbi.nlm.ni...
PMID 12559621 View Gene Set 0.0003968 10 0.01028 96 Assessment of killer cell immunoglobulinlike receptor expression and corresponding HLA class I phenotypes demonstrates heterogenous KIR expression independent of anticipated HLA class I ligands. www.ncbi.nlm.ni...
PMID 15078178 View Gene Set 0.0003977 19 0.01028 96 HIV/SIV escape from immune surveillance: focus on Nef. www.ncbi.nlm.ni...
PMID 19944766 View Gene Set 0.0004063 15 0.01039 98 A pilot multivariate parallel ICA study to investigate differential linkage between neural networks and genetic profiles in schizophrenia. www.ncbi.nlm.ni...
PMID 9545232 View Gene Set 0.0004344 10 0.011 99 ER-60 a chaperone with thiol-dependent reductase activity involved in MHC class I assembly. www.ncbi.nlm.ni...
PMID 19008959 View Gene Set 0.0004394 12 0.01102 100 The genetics of primary haemorrhagic stroke subarachnoid haemorrhage and ruptured intracranial aneurysms in adults. www.ncbi.nlm.ni...
PMID 17490516 View Gene Set 0.0004707 12 0.01168 101 [Polymorphism of killer cell immunoglobulin-like receptor gene and its correlation with leukemia]. www.ncbi.nlm.ni...
PMID 10843712 View Gene Set 0.0005083 25 0.01249 102 Release of calcium from inositol 1 4 5-trisphosphate receptor-regulated stores by HIV-1 Tat regulates TNF-alpha production in human macrophages. www.ncbi.nlm.ni...
PMID 15489916 View Gene Set 0.0005248 24 0.01277 103 Function of the Src-family kinases Lck and Fyn in T-cell development and activation. www.ncbi.nlm.ni...
PMID 16272310 View Gene Set 0.0005431 10 0.01297 104 Functional analysis of HIV type 1 Nef reveals a role for PAK2 as a regulator of cell phenotype and function in the murine dendritic cell line DC2.4. www.ncbi.nlm.ni...
PMID 1979339 View Gene Set 0.0005407 18 0.01297 104 Human immunodeficiency virus-1 glycoproteins gp120 and gp160 specifically inhibit the CD3/T cell-antigen receptor phosphoinositide transduction pathway. www.ncbi.nlm.ni...
PMID 19352218 View Gene Set 0.000558 28 0.0132 106 Candidate gene analysis in an on-going genome-wide association study of attention-deficit hyperactivity disorder: suggestive association signals in ADRA1A. www.ncbi.nlm.ni...
PMID 19193342 View Gene Set 0.0005709 17 0.01338 107 Multiple genetic factors in olanzapine-induced weight gain in schizophrenia patients: a cohort study. www.ncbi.nlm.ni...
PMID 19578796 View Gene Set 0.000599 152 0.01391 108 Association of genetic variants with chronic kidney disease in individuals with different lipid profiles. www.ncbi.nlm.ni...
PMID 14656967 View Gene Set 0.000606 43 0.01394 109 Analysis of the gene-dense major histocompatibility complex class III region and its comparison to mouse. www.ncbi.nlm.ni...
PMID 16091223 View Gene Set 0.0006409 14 0.01461 110 HIV accessory proteins and surviving the host cell. www.ncbi.nlm.ni...
PMID 10574461 View Gene Set 0.0006561 75 0.01482 111 Characterization of cDNA clones selected by the GeneMark analysis from size-fractionated cDNA libraries from human brain. www.ncbi.nlm.ni...
PMID 15117958 View Gene Set 0.0006684 11 0.01496 112 90-kDa ribosomal S6 kinase is a direct target for the nuclear fibroblast growth factor receptor 1 (FGFR1): role in FGFR1 signaling. www.ncbi.nlm.ni...
PMID 12975309 View Gene Set 0.0006857 1000 0.01508 113 The secreted protein discovery initiative (SPDI) a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment. www.ncbi.nlm.ni...
PMID 17703412 View Gene Set 0.0006811 207 0.01508 113 Genetic susceptibility to respiratory syncytial virus bronchiolitis is predominantly associated with innate immune genes. www.ncbi.nlm.ni...
PMID 11827988 View Gene Set 0.0006993 25 0.01511 115 Adapters in lymphocyte signaling. www.ncbi.nlm.ni...
PMID 19258923 View Gene Set 0.0006954 205 0.01511 115 Genetic susceptibility to respiratory syncytial virus bronchiolitis in preterm children is associated with airway remodeling genes and innate immune genes. www.ncbi.nlm.ni...
PMID 16454711 View Gene Set 0.0007265 19 0.01545 117 Modelling thymic HIV-1 Nef effects. www.ncbi.nlm.ni...
PMID 17652306 View Gene Set 0.0007331 28 0.01545 117 Keeping the (kinase) party going: SLP-76 and ITK dance to the beat. www.ncbi.nlm.ni...
PMID 19506906 View Gene Set 0.0007305 18 0.01545 117 Candidate gene studies of ADHD: a meta-analytic review. www.ncbi.nlm.ni...
PMID 12734410 View Gene Set 0.0007836 20 0.01614 120 HIV-1 Nef control of cell signalling molecules: multiple strategies to promote virus replication. www.ncbi.nlm.ni...
PMID 12836198 View Gene Set 0.0007855 17 0.01614 120 [The HIV nef and the Kaposi-sarcoma-associated virus K3/K5 proteins: "parasites"of the endocytosis pathway]. www.ncbi.nlm.ni...
PMID 9687510 View Gene Set 0.0007817 14 0.01614 120 Mitogen- and stress-activated protein kinase-1 (MSK1) is directly activated by MAPK and SAPK2/p38 and may mediate activation of CREB. www.ncbi.nlm.ni...
PMID 19336370 View Gene Set 0.0007959 130 0.01622 123 Determination of genetic predisposition to patent ductus arteriosus in preterm infants. www.ncbi.nlm.ni...
PMID 9671211 View Gene Set 0.0008283 21 0.01675 124 Human immunodeficiency virus Tat protein induces interleukin 6 mRNA expression in human brain endothelial cells via protein kinase C- and cAMP-dependent protein kinase pathways. www.ncbi.nlm.ni...
PMID 18391953 View Gene Set 0.0008818 22 0.01754 125 Rare independent mutations in renal salt handling genes contribute to blood pressure variation. www.ncbi.nlm.ni...
PMID 18628988 View Gene Set 0.0008782 22 0.01754 125 Neither replication nor simulation supports a role for the axon guidance pathway in the genetics of Parkinson's disease. www.ncbi.nlm.ni...
PMID 14965316 View Gene Set 0.0009424 12 0.01853 127 Interactions of HIV-1 proteins gp120 and Nef with cellular partners define a novel allosteric paradigm. www.ncbi.nlm.ni...
PMID 20351714 View Gene Set 0.0009463 51 0.01853 127 Poor replication of candidate genes for major depressive disorder using genome-wide association data. www.ncbi.nlm.ni...
PMID 19474452 View Gene Set 0.0009779 23 0.019 129 Perioperative genomic profiles using structure-specific oligonucleotide probes. www.ncbi.nlm.ni...
PMID 10221984 View Gene Set 0.001084 18 0.01961 130 Vacuolar and plasma membrane proton-adenosinetriphosphatases. www.ncbi.nlm.ni...
PMID 10224039 View Gene Set 0.001084 18 0.01961 130 Structure and properties of the vacuolar (H+)-ATPases. www.ncbi.nlm.ni...
PMID 10340843 View Gene Set 0.001084 18 0.01961 130 Introduction: V-ATPases 1992-1998. www.ncbi.nlm.ni...
PMID 10440860 View Gene Set 0.001084 18 0.01961 130 Animal plasma membrane energization by proton-motive V-ATPases. www.ncbi.nlm.ni...
PMID 10690502 View Gene Set 0.001111 21 0.01961 130 Tight junctions of the blood-brain barrier. www.ncbi.nlm.ni...
PMID 11247307 View Gene Set 0.001111 21 0.01961 130 The roles of claudin superfamily proteins in paracellular transport. www.ncbi.nlm.ni...
PMID 11283726 View Gene Set 0.001111 21 0.01961 130 Multifunctional strands in tight junctions. www.ncbi.nlm.ni...
PMID 12231346 View Gene Set 0.001111 21 0.01961 130 Claudin-based barrier in simple and stratified cellular sheets. www.ncbi.nlm.ni...
PMID 12475568 View Gene Set 0.001111 21 0.01961 130 Tight junction proteins. www.ncbi.nlm.ni...
PMID 17373842 View Gene Set 0.001031 19 0.01961 130 HDM2-binding partners: interaction with translation elongation factor EF1alpha. www.ncbi.nlm.ni...
PMID 18036336 View Gene Set 0.001111 24 0.01961 130 Structure and function of claudins. www.ncbi.nlm.ni...
PMID 19706201 View Gene Set 0.001111 23 0.01961 130 The claudins. www.ncbi.nlm.ni...
PMID 9210392 View Gene Set 0.001084 18 0.01961 130 The vacuolar H+-ATPase: a universal proton pump of eukaryotes. www.ncbi.nlm.ni...
PMID 12387894 View Gene Set 0.001177 12 0.02049 143 Involvement of aberrant glycosylation in phosphorylation of tau by cdk5 and GSK-3beta. www.ncbi.nlm.ni...
PMID 9832145 View Gene Set 0.001177 12 0.02049 143 New phosphorylation sites identified in hyperphosphorylated tau (paired helical filament-tau) from Alzheimer's disease brain using nanoelectrospray mass spectrometry. www.ncbi.nlm.ni...
PMID 18198266 View Gene Set 0.001227 14 0.02121 145 No significant association of 14 candidate genes with schizophrenia in a large European ancestry sample: implications for psychiatric genetics. www.ncbi.nlm.ni...
PMID 20056178 View Gene Set 0.001255 142 0.02156 146 Polymorphisms in innate immunity genes and patients response to dendritic cell-based HIV immuno-treatment. www.ncbi.nlm.ni...
PMID 20205591 View Gene Set 0.001295 18 0.02209 147 Host determinants of HIV-1 control in African Americans. www.ncbi.nlm.ni...
PMID 11739647 View Gene Set 0.001328 24 0.02249 148 Complexes of tetraspanins with integrins: more than meets the eye. www.ncbi.nlm.ni...
PMID 11140838 View Gene Set 0.001347 58 0.02251 149 A multivariate analysis of 59 candidate genes in personality traits: the temperament and character inventory. www.ncbi.nlm.ni...
PMID 20331378 View Gene Set 0.00134 112 0.02251 149 Large-scale candidate gene analysis of spontaneous clearance of hepatitis C virus. www.ncbi.nlm.ni...
PMID 12119179 View Gene Set 0.001374 18 0.0227 151 Organization of focal adhesion plaques is disrupted by action of the HIV-1 protease. www.ncbi.nlm.ni...
PMID 9442887 View Gene Set 0.001376 19 0.0227 151 Structure function and regulation of the vacuolar (H+)-ATPase. www.ncbi.nlm.ni...
PMID 12960231 View Gene Set 0.001415 17 0.02318 153 Macrophage activation through CCR5- and CXCR4-mediated gp120-elicited signaling pathways. www.ncbi.nlm.ni...
PMID 15638726 View Gene Set 0.001466 31 0.02385 154 Nef: "necessary and enforcing factor" in HIV infection. www.ncbi.nlm.ni...
PMID 19453261 View Gene Set 0.001475 383 0.02385 154 High-density association study of 383 candidate genes for volumetric BMD at the femoral neck and lumbar spine among older men. www.ncbi.nlm.ni...
PMID 11904677 View Gene Set 0.00156 10 0.02491 156 Distinctive KIR and HLA diversity in a panel of north Indian Hindus. www.ncbi.nlm.ni...
PMID 19956635 View Gene Set 0.001555 108 0.02491 156 Fulfilling the promise of personalized medicine? Systematic review and field synopsis of pharmacogenetic studies. www.ncbi.nlm.ni...
PMID 15063762 View Gene Set 0.001705 32 0.02705 158 Genetic variations in humans associated with differences in the course of hepatitis C. www.ncbi.nlm.ni...
PMID 17192257 View Gene Set 0.001716 78 0.02705 158 Proteomics analysis of protein kinases by target class-selective prefractionation and tandem mass spectrometry. www.ncbi.nlm.ni...
PMID 8723724 View Gene Set 0.001749 14 0.0274 160 A gene-rich cluster between the CD4 and triosephosphate isomerase genes at human chromosome 12p13. www.ncbi.nlm.ni...
PMID 8084338 View Gene Set 0.001837 21 0.02861 161 HIV-1 gp41 binding proteins and antibodies to gp41 could inhibit enhancement of human Raji cell MHC class I and II expression by gp41. www.ncbi.nlm.ni...
PMID 19339270 View Gene Set 0.001875 59 0.02902 162 Genetic associations of 115 polymorphisms with cancers of the upper aerodigestive tract across 10 European countries: the ARCAGE project. www.ncbi.nlm.ni...
PMID 18974842 View Gene Set 0.001902 46 0.02925 163 Gender differences in genetic risk profiles for cardiovascular disease. www.ncbi.nlm.ni...
PMID 10662545 View Gene Set 0.002009 10 0.03071 164 Physical map of 17p13 and the genes adjacent to p53. www.ncbi.nlm.ni...
PMID 17373692 View Gene Set 0.00203 19 0.03084 165 No evidence for association between 19 cholinergic genes and bipolar disorder. www.ncbi.nlm.ni...
PMID 20049410 View Gene Set 0.0021 14 0.03171 166 A functionally relevant IRF5 haplotype is associated with reduced risk to Wegener's granulomatosis. www.ncbi.nlm.ni...
PMID 18174230 View Gene Set 0.002155 53 0.03235 167 Association of polymorphisms in complement component C3 gene with susceptibility to systemic lupus erythematosus. www.ncbi.nlm.ni...
PMID 19911011 View Gene Set 0.002204 39 0.03289 168 Mutation of ARHGAP9 in patients with coronary spastic angina. www.ncbi.nlm.ni...
PMID 12736707 View Gene Set 0.002303 13 0.03416 169 CLDN23 gene frequently down-regulated in intestinal-type gastric cancer is a novel member of CLAUDIN gene family. www.ncbi.nlm.ni...
PMID 19862010 View Gene Set 0.002396 55 0.03533 170 Multiple loci influence erythrocyte phenotypes in the CHARGE Consortium. www.ncbi.nlm.ni...
PMID 10207129 View Gene Set 0.002536 20 0.03551 171 Eph receptors and ephrins: effectors of morphogenesis. www.ncbi.nlm.ni...
PMID 10229664 View Gene Set 0.002449 12 0.03551 171 Selective tetraspan-integrin complexes (CD81/alpha4beta1 CD151/alpha3beta1 CD151/alpha6beta1) under conditions disrupting tetraspan interactions. www.ncbi.nlm.ni...
PMID 10730216 View Gene Set 0.002536 21 0.03551 171 Eph receptors and ephrins: regulators of guidance and assembly. www.ncbi.nlm.ni...
PMID 11128993 View Gene Set 0.002536 21 0.03551 171 Roles of Eph receptors and ephrins in segmental patterning. www.ncbi.nlm.ni...
PMID 11256076 View Gene Set 0.002536 20 0.03551 171 Multiple roles of EPH receptors and ephrins in neural development. www.ncbi.nlm.ni...
PMID 20078877 View Gene Set 0.002504 14 0.03551 171 Gene polymorphisms in association with emerging cardiovascular risk markers in adult women. www.ncbi.nlm.ni...
PMID 9267020 View Gene Set 0.002536 20 0.03551 171 Unified nomenclature for Eph family receptors and their ligands the ephrins. Eph Nomenclature Committee. www.ncbi.nlm.ni...
PMID 9530499 View Gene Set 0.002536 20 0.03551 171 The ephrins and Eph receptors in neural development. www.ncbi.nlm.ni...
PMID 9576626 View Gene Set 0.002536 20 0.03551 171 The Eph family receptors and ligands. www.ncbi.nlm.ni...
PMID 9771888 View Gene Set 0.002597 10 0.03617 180 Tau is phosphorylated by GSK-3 at several sites found in Alzheimer disease and its biological activity markedly inhibited only after it is prephosphorylated by A-kinase. www.ncbi.nlm.ni...
PMID 16006997 View Gene Set 0.002682 25 0.03715 181 A comprehensive analysis of phase I and phase II metabolism gene polymorphisms and risk of colorectal cancer. www.ncbi.nlm.ni...
PMID 19095219 View Gene Set 0.002887 19 0.03976 182 Variation in catechol-O-methyltransferase is associated with duloxetine response in a clinical trial for major depressive disorder. www.ncbi.nlm.ni...
PMID 10022833 View Gene Set 0.002917 16 0.03996 183 Socs1 binds to multiple signalling proteins and suppresses steel factor-dependent proliferation. www.ncbi.nlm.ni...
PMID 10229200 View Gene Set 0.003024 10 0.0412 184 Differential effects of the widely expressed dMax splice variant of Max on E-box vs initiator element-mediated regulation by c-Myc. www.ncbi.nlm.ni...
PMID 11436125 View Gene Set 0.003115 15 0.04199 185 Lack of replication of association findings in complex disease: an analysis of 15 polymorphisms in prior candidate genes for sporadic Alzheimer's disease. www.ncbi.nlm.ni...
PMID 16303743 View Gene Set 0.003104 427 0.04199 185 Signal sequence and keyword trap in silico for selection of full-length human cDNAs encoding secretion or membrane proteins from oligo-capped cDNA libraries. www.ncbi.nlm.ni...
PMID 9269777 View Gene Set 0.003156 12 0.04229 187 CD4 cross-linking (CD4XL) induces RAS activation and tumor necrosis factor-alpha secretion in CD4+ T cells. www.ncbi.nlm.ni...
PMID 9481670 View Gene Set 0.003171 16 0.04229 187 Adjacent asparagines in the NR2-subunit of the NMDA receptor channel control the voltage-dependent block by extracellular Mg2+. www.ncbi.nlm.ni...
PMID 12435421 View Gene Set 0.003242 11 0.04301 189 Aberrant glycosylation modulates phosphorylation of tau by protein kinase A and dephosphorylation of tau by protein phosphatase 2A and 5. www.ncbi.nlm.ni...
PMID 17081065 View Gene Set 0.003517 80 0.04616 190 Proteomic and bioinformatic characterization of the biogenesis and function of melanosomes. www.ncbi.nlm.ni...
PMID 20395963 View Gene Set 0.0035 26 0.04616 190 Replication of genetic association studies in asthma and related phenotypes. www.ncbi.nlm.ni...
PMID 10479680 View Gene Set 0.003582 14 0.04677 192 Neuronal interleukin-16 (NIL-16): a dual function PDZ domain protein. www.ncbi.nlm.ni...
PMID 12427289 View Gene Set 0.003641 20 0.04705 193 HIV-1 gp120 modulates the immunological function and expression of accessory and co-stimulatory molecules of monocyte-derived dendritic cells. www.ncbi.nlm.ni...
PMID 12482669 View Gene Set 0.003623 39 0.04705 193 Signaling pathways triggered by HIV-1 Tat in human monocytes to induce TNF-alpha. www.ncbi.nlm.ni...
PMID 16702430 View Gene Set 0.003678 30 0.04728 195 Rapid evolution of major histocompatibility complex class I genes in primates generates new disease alleles in humans via hitchhiking diversity. www.ncbi.nlm.ni...
PMID 12239168 View Gene Set 0.003744 13 0.04789 196 gp120-mediated induction of the MAPK cascade is dependent on the activation state of CD4(+) lymphocytes. www.ncbi.nlm.ni...

Gene Set Collection: ChromosomalTiles5Mb

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null chr6_30-35Mb View Gene Set 1.003e-06 127 0.001117 1 Genomic tile: chr6 ; 30000001-35000001 Mb genome.ucsc.edu...
Null chr19_47.5-52.5Mb View Gene Set 3.576e-05 80 0.01836 2 Genomic tile: chr19 ; 47500001-52500001 Mb genome.ucsc.edu...
Null chr3_7.5-12.5Mb View Gene Set 4.944e-05 42 0.01836 2 Genomic tile: chr3 ; 7500001-12500001 Mb genome.ucsc.edu...
Null chr19_50-55Mb View Gene Set 0.0001297 112 0.02891 4 Genomic tile: chr19 ; 50000001-55000001 Mb genome.ucsc.edu...
Null chrX_65-70Mb View Gene Set 0.0001118 23 0.02891 4 Genomic tile: chrX ; 65000001-70000001 Mb genome.ucsc.edu...
Null chr12_5-10Mb View Gene Set 0.0002234 66 0.03572 6 Genomic tile: chr12 ; 5000001-10000001 Mb genome.ucsc.edu...
Null chr6_27.5-32.5Mb View Gene Set 0.0002245 99 0.03572 6 Genomic tile: chr6 ; 27500001-32500001 Mb genome.ucsc.edu...
Null chr12_47.5-52.5Mb View Gene Set 0.0003128 84 0.04356 8 Genomic tile: chr12 ; 47500001-52500001 Mb genome.ucsc.edu...

Gene Set Collection: Prosite

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null PS50835 View Gene Set 4.299e-18 658 3.16e-15 1 IG_LIKE expasy.org/pros...
Null PS00237 View Gene Set 3.715e-08 555 9.249e-06 2 G_PROTEIN_RECEP_F1_1 expasy.org/pros...
Null PS50262 View Gene Set 3.775e-08 765 9.249e-06 2 G_PROTEIN_RECEP_F1_2 expasy.org/pros...
Null PS00109 View Gene Set 1.264e-06 98 0.0002323 4 PROTEIN_KINASE_TYR expasy.org/pros...
Null PS50011 View Gene Set 3.557e-06 493 0.0005229 5 PROTEIN_KINASE_DOM expasy.org/pros...
Null PS00022 View Gene Set 6.313e-06 151 0.000582 6 EGF_1 expasy.org/pros...
Null PS01186 View Gene Set 6.005e-06 171 0.000582 6 EGF_2 expasy.org/pros...
Null PS50026 View Gene Set 6.334e-06 207 0.000582 6 EGF_3 expasy.org/pros...
Null PS50001 View Gene Set 9.388e-06 110 0.0007667 9 SH2 expasy.org/pros...
Null PS01187 View Gene Set 1.164e-05 99 0.0008559 10 EGF_CA expasy.org/pros...
Null PS50923 View Gene Set 2.728e-05 57 0.001823 11 SUSHI expasy.org/pros...
Null PS00290 View Gene Set 5.96e-05 86 0.00365 12 IG_MHC expasy.org/pros...
Null PS00107 View Gene Set 0.0001204 384 0.006808 13 PROTEIN_KINASE_ATP expasy.org/pros...
Null PS50853 View Gene Set 0.0001445 181 0.007585 14 FN3 expasy.org/pros...
Null PS00010 View Gene Set 0.0001898 103 0.009298 15 ASX_HYDROXYL expasy.org/pros...
Null PS50004 View Gene Set 0.0003914 115 0.01798 16 C2 expasy.org/pros...
Null PS50240 View Gene Set 0.0004186 122 0.0181 17 TRYPSIN_DOM expasy.org/pros...
Null PS51004 View Gene Set 0.0005064 31 0.02068 18 SEMA expasy.org/pros...
Null PS00221 View Gene Set 0.0007848 10 0.02807 19 MIP expasy.org/pros...
Null PS01285 View Gene Set 0.0008784 22 0.02807 19 FA58C_1 expasy.org/pros...
Null PS50003 View Gene Set 0.0008523 259 0.02807 19 PH_DOMAIN expasy.org/pros...
Null PS50022 View Gene Set 0.0008784 25 0.02807 19 FA58C_3 expasy.org/pros...
Null PS50132 View Gene Set 0.0007758 36 0.02807 19 RGS expasy.org/pros...
Null PS01286 View Gene Set 0.001016 20 0.0311 24 FA58C_2 expasy.org/pros...
Null PS51285 View Gene Set 0.001091 55 0.03207 25 AGC_KINASE_CTER expasy.org/pros...
Null PS50152 View Gene Set 0.001536 5 0.04341 26 25A_SYNTH_3 expasy.org/pros...
Null PS01346 View Gene Set 0.001703 23 0.04494 27 CLAUDIN expasy.org/pros...
Null PS01351 View Gene Set 0.001712 12 0.04494 27 MAPK expasy.org/pros...

Gene Set Collection: Enzyme

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null EC:2.7.10.1 View Gene Set 1.025e-05 38 0.00162 1 Receptor protein-tyrosine kinase expasy.org/enzy...

Gene Set Collection: ppi.BioGRID

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null ppi.SRC View Gene Set 1.662e-06 91 0.003817 1 Protein-protein-interaction for SRC www.ncbi.nlm.ni...
Null ppi.SHC1 View Gene Set 4.526e-06 66 0.005199 2 Protein-protein-interaction for SHC1 www.ncbi.nlm.ni...
Null ppi.PLCG1 View Gene Set 4.831e-05 34 0.02969 3 Protein-protein-interaction for PLCG1 www.ncbi.nlm.ni...
Null ppi.PTPN11 View Gene Set 5.17e-05 38 0.02969 3 Protein-protein-interaction for PTPN11 www.ncbi.nlm.ni...
Null ppi.DLG1 View Gene Set 8.782e-05 7 0.03362 5 Protein-protein-interaction for DLG1 www.ncbi.nlm.ni...
Null ppi.FN1 View Gene Set 7.512e-05 12 0.03362 5 Protein-protein-interaction for FN1 www.ncbi.nlm.ni...
Null ppi.FYN View Gene Set 0.0001348 27 0.03639 7 Protein-protein-interaction for FYN www.ncbi.nlm.ni...
Null ppi.KIT View Gene Set 0.0001619 15 0.03639 7 Protein-protein-interaction for KIT www.ncbi.nlm.ni...
Null ppi.STAT5A View Gene Set 0.0001743 24 0.03639 7 Protein-protein-interaction for STAT5A www.ncbi.nlm.ni...
Null ppi.SYK View Gene Set 0.0001455 38 0.03639 7 Protein-protein-interaction for SYK www.ncbi.nlm.ni...
Null ppi.TRIP6 View Gene Set 0.0001567 17 0.03639 7 Protein-protein-interaction for TRIP6 www.ncbi.nlm.ni...
Null ppi.LYN View Gene Set 0.0002561 25 0.046 12 Protein-protein-interaction for LYN www.ncbi.nlm.ni...
Null ppi.DUSP16 View Gene Set 0.0002603 8 0.046 12 Protein-protein-interaction for DUSP16 www.ncbi.nlm.ni...
Null ppi.EZR View Gene Set 0.0002978 37 0.04885 14 Protein-protein-interaction for EZR www.ncbi.nlm.ni...

Gene Set Collection: ppi.HPRD

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null ppi.SHC1 View Gene Set 1.196e-09 94 2.84e-06 1 Protein-protein-interaction for SHC1 www.ncbi.nlm.ni...
Null ppi.SYK View Gene Set 4.565e-07 54 0.0005419 2 Protein-protein-interaction for SYK www.ncbi.nlm.ni...
Null ppi.PIK3R1 View Gene Set 1.756e-06 72 0.00139 3 Protein-protein-interaction for PIK3R1 www.ncbi.nlm.ni...
Null ppi.LCK View Gene Set 2.842e-06 41 0.001398 4 Protein-protein-interaction for LCK www.ncbi.nlm.ni...
Null ppi.SRC View Gene Set 2.945e-06 134 0.001398 4 Protein-protein-interaction for SRC www.ncbi.nlm.ni...
Null ppi.GRIN2B View Gene Set 2.2e-05 15 0.008704 6 Protein-protein-interaction for GRIN2B www.ncbi.nlm.ni...
Null ppi.PLCG1 View Gene Set 3.502e-05 52 0.01056 7 Protein-protein-interaction for PLCG1 www.ncbi.nlm.ni...
Null ppi.PTPN11 View Gene Set 3.558e-05 70 0.01056 7 Protein-protein-interaction for PTPN11 www.ncbi.nlm.ni...
Null ppi.RET View Gene Set 5.571e-05 21 0.01469 9 Protein-protein-interaction for RET www.ncbi.nlm.ni...
Null ppi.LYN View Gene Set 6.742e-05 45 0.01601 10 Protein-protein-interaction for LYN www.ncbi.nlm.ni...
Null ppi.LAT View Gene Set 0.0001096 24 0.02365 11 Protein-protein-interaction for LAT www.ncbi.nlm.ni...
Null ppi.PTPN6 View Gene Set 0.0001204 54 0.02382 12 Protein-protein-interaction for PTPN6 www.ncbi.nlm.ni...
Null ppi.KIT View Gene Set 0.0001356 22 0.02477 13 Protein-protein-interaction for KIT www.ncbi.nlm.ni...
Null ppi.NLRP1 View Gene Set 0.0002922 9 0.04479 14 Protein-protein-interaction for NLRP1 www.ncbi.nlm.ni...
Null ppi.PIK3R2 View Gene Set 0.0003141 22 0.04479 14 Protein-protein-interaction for PIK3R2 www.ncbi.nlm.ni...
Null ppi.DUSP16 View Gene Set 0.000265 9 0.04479 14 Protein-protein-interaction for DUSP16 www.ncbi.nlm.ni...
Null ppi.GAB2 View Gene Set 0.0003207 23 0.04479 14 Protein-protein-interaction for GAB2 www.ncbi.nlm.ni...
Null ppi.GRIN2A View Gene Set 0.0003656 12 0.04822 18 Protein-protein-interaction for GRIN2A www.ncbi.nlm.ni...
Null ppi.FN1 View Gene Set 0.000411 25 0.04998 19 Protein-protein-interaction for FN1 www.ncbi.nlm.ni...
Null ppi.SH3BP5 View Gene Set 0.000421 6 0.04998 19 Protein-protein-interaction for SH3BP5 www.ncbi.nlm.ni...

Gene Set Collection: ppi.anyDB

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null ppi.SHC1 View Gene Set 1.345e-08 101 4.835e-05 1 Protein-protein-interaction for SHC1 www.ncbi.nlm.ni...
Null ppi.SRC View Gene Set 1.899e-07 171 0.0003412 2 Protein-protein-interaction for SRC www.ncbi.nlm.ni...
Null ppi.SYK View Gene Set 1.252e-06 62 0.001499 3 Protein-protein-interaction for SYK www.ncbi.nlm.ni...
Null ppi.PIK3R1 View Gene Set 2.947e-06 84 0.002648 4 Protein-protein-interaction for PIK3R1 www.ncbi.nlm.ni...
Null ppi.LCK View Gene Set 4.491e-06 45 0.003228 5 Protein-protein-interaction for LCK www.ncbi.nlm.ni...
Null ppi.PTPN11 View Gene Set 6.908e-06 75 0.004138 6 Protein-protein-interaction for PTPN11 www.ncbi.nlm.ni...
Null ppi.GRIN2B View Gene Set 2.2e-05 15 0.009883 7 Protein-protein-interaction for GRIN2B www.ncbi.nlm.ni...
Null ppi.PLCG1 View Gene Set 1.932e-05 59 0.009883 7 Protein-protein-interaction for PLCG1 www.ncbi.nlm.ni...
Null ppi.LYN View Gene Set 3.136e-05 48 0.01127 9 Protein-protein-interaction for LYN www.ncbi.nlm.ni...
Null ppi.RET View Gene Set 3.011e-05 22 0.01127 9 Protein-protein-interaction for RET www.ncbi.nlm.ni...
Null ppi.KIT View Gene Set 4.097e-05 24 0.01338 11 Protein-protein-interaction for KIT www.ncbi.nlm.ni...
Null ppi.EZR View Gene Set 4.868e-05 50 0.01458 12 Protein-protein-interaction for EZR www.ncbi.nlm.ni...
Null ppi.LAT View Gene Set 5.385e-05 27 0.01489 13 Protein-protein-interaction for LAT www.ncbi.nlm.ni...
Null ppi.DLG1 View Gene Set 0.0001185 11 0.02643 14 Protein-protein-interaction for DLG1 www.ncbi.nlm.ni...
Null ppi.FN1 View Gene Set 0.0001324 27 0.02643 14 Protein-protein-interaction for FN1 www.ncbi.nlm.ni...
Null ppi.CD82 View Gene Set 0.0001298 23 0.02643 14 Protein-protein-interaction for CD82 www.ncbi.nlm.ni...
Null ppi.PTPN6 View Gene Set 0.0001204 54 0.02643 14 Protein-protein-interaction for PTPN6 www.ncbi.nlm.ni...
Null ppi.IRS2 View Gene Set 0.0001279 38 0.02643 14 Protein-protein-interaction for IRS2 www.ncbi.nlm.ni...
Null ppi.CD46 View Gene Set 0.0001784 10 0.03375 19 Protein-protein-interaction for CD46 www.ncbi.nlm.ni...
Null ppi.INPP5D View Gene Set 0.0002039 15 0.03494 20 Protein-protein-interaction for INPP5D www.ncbi.nlm.ni...
Null ppi.PIK3R2 View Gene Set 0.0002042 24 0.03494 20 Protein-protein-interaction for PIK3R2 www.ncbi.nlm.ni...
Null ppi.DUSP16 View Gene Set 0.000265 9 0.0433 22 Protein-protein-interaction for DUSP16 www.ncbi.nlm.ni...
Null ppi.NLRP1 View Gene Set 0.0002922 9 0.04565 23 Protein-protein-interaction for NLRP1 www.ncbi.nlm.ni...
Null ppi.PRKCA View Gene Set 0.0003414 104 0.04908 24 Protein-protein-interaction for PRKCA www.ncbi.nlm.ni...
Null ppi.72508 View Gene Set 0.0003296 7 0.04908 24 Protein-protein-interaction for 72508 www.ncbi.nlm.ni...

Gene Set Collection: pathwayCommons.cell-map

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null KitReceptor View Gene Set 0.0002551 54 0.002551 1 CELL_MAP - KitReceptor gene set www.pathwaycomm...
Null Alpha6Beta4Integrin View Gene Set 0.008666 49 0.04333 2 CELL_MAP - Alpha6Beta4Integrin gene set www.pathwaycomm...

Gene Set Collection: pathwayCommons.nci-nature

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null Plasma membrane estrogen receptor signaling View Gene Set 1.408e-06 297 0.0002618 1 NCI_NATURE - Plasma membrane estrogen receptor signaling gene set www.pathwaycomm...
Null TCR signaling in na&#xef;ve CD8+ T cells View Gene Set 9.5e-06 129 0.0005186 2 NCI_NATURE - TCR signaling in na&#xef;ve CD8+ T cells gene set www.pathwaycomm...
Null IGF1 pathway View Gene Set 1.083e-05 271 0.0005186 2 NCI_NATURE - IGF1 pathway gene set www.pathwaycomm...
Null Insulin Pathway View Gene Set 2.951e-05 263 0.0005186 2 NCI_NATURE - Insulin Pathway gene set www.pathwaycomm...
Null Downstream signaling in na&#xef;ve CD8+ T cells View Gene Set 1.149e-05 67 0.0005186 2 NCI_NATURE - Downstream signaling in na&#xef;ve CD8+ T cells gene set www.pathwaycomm...
Null Arf6 signaling events View Gene Set 2.951e-05 263 0.0005186 2 NCI_NATURE - Arf6 signaling events gene set www.pathwaycomm...
Null Angiopoietin receptor Tie2-mediated signaling View Gene Set 3.346e-05 50 0.0005186 2 NCI_NATURE - Angiopoietin receptor Tie2-mediated signaling gene set www.pathwaycomm...
Null E-cadherin signaling in keratinocytes View Gene Set 1.802e-05 21 0.0005186 2 NCI_NATURE - E-cadherin signaling in keratinocytes gene set www.pathwaycomm...
Null Arf6 trafficking events View Gene Set 2.951e-05 263 0.0005186 2 NCI_NATURE - Arf6 trafficking events gene set www.pathwaycomm...
Null CXCR4-mediated signaling events View Gene Set 1.562e-05 192 0.0005186 2 NCI_NATURE - CXCR4-mediated signaling events gene set www.pathwaycomm...
Null a4b1 and a4b7 Integrin signaling View Gene Set 3.254e-05 28 0.0005186 2 NCI_NATURE - a4b1 and a4b7 Integrin signaling gene set www.pathwaycomm...
Null Paxillin-independent events mediated by a4b1 and a4b7 View Gene Set 2.441e-05 24 0.0005186 2 NCI_NATURE - Paxillin-independent events mediated by a4b1 and a4b7 gene set www.pathwaycomm...
Null EphrinB-EPHB pathway View Gene Set 3.841e-05 57 0.0005495 13 NCI_NATURE - EphrinB-EPHB pathway gene set www.pathwaycomm...
Null Endothelins View Gene Set 4.566e-05 439 0.0006066 14 NCI_NATURE - Endothelins gene set www.pathwaycomm...
Null IL4-mediated signaling events View Gene Set 8.552e-05 62 0.0009941 15 NCI_NATURE - IL4-mediated signaling events gene set www.pathwaycomm...
Null Syndecan-2-mediated signaling events View Gene Set 8.427e-05 77 0.0009941 15 NCI_NATURE - Syndecan-2-mediated signaling events gene set www.pathwaycomm...
Null Ephrin B reverse signaling View Gene Set 9.264e-05 28 0.001014 17 NCI_NATURE - Ephrin B reverse signaling gene set www.pathwaycomm...
Null Thromboxane A2 receptor signaling View Gene Set 0.0001443 54 0.00122 18 NCI_NATURE - Thromboxane A2 receptor signaling gene set www.pathwaycomm...
Null ErbB1 downstream signaling View Gene Set 0.0001442 812 0.00122 18 NCI_NATURE - ErbB1 downstream signaling gene set www.pathwaycomm...
Null EGF receptor (ErbB1) signaling pathway View Gene Set 0.0001442 812 0.00122 18 NCI_NATURE - EGF receptor (ErbB1) signaling pathway gene set www.pathwaycomm...
Null Internalization of ErbB1 View Gene Set 0.0001442 812 0.00122 18 NCI_NATURE - Internalization of ErbB1 gene set www.pathwaycomm...
Null ErbB receptor signaling network View Gene Set 0.0001396 841 0.00122 18 NCI_NATURE - ErbB receptor signaling network gene set www.pathwaycomm...
Null IL2-mediated signaling events View Gene Set 0.0001572 116 0.001271 23 NCI_NATURE - IL2-mediated signaling events gene set www.pathwaycomm...
Null mTOR signaling pathway View Gene Set 0.0001899 343 0.001418 24 NCI_NATURE - mTOR signaling pathway gene set www.pathwaycomm...
Null IL2 signaling events mediated by STAT5 View Gene Set 0.0001906 28 0.001418 24 NCI_NATURE - IL2 signaling events mediated by STAT5 gene set www.pathwaycomm...
Null IFN-gamma pathway View Gene Set 0.0002209 590 0.00158 26 NCI_NATURE - IFN-gamma pathway gene set www.pathwaycomm...
Null EGFR-dependent Endothelin signaling events View Gene Set 0.0002366 345 0.001625 27 NCI_NATURE - EGFR-dependent Endothelin signaling events gene set www.pathwaycomm...
Null LKB1 signaling events View Gene Set 0.0002533 372 0.001625 27 NCI_NATURE - LKB1 signaling events gene set www.pathwaycomm...
Null Signaling events mediated by PTP1B View Gene Set 0.000253 51 0.001625 27 NCI_NATURE - Signaling events mediated by PTP1B gene set www.pathwaycomm...
Null EphrinA-EPHA pathway View Gene Set 0.0002659 43 0.001649 30 NCI_NATURE - EphrinA-EPHA pathway gene set www.pathwaycomm...
Null Nectin adhesion pathway View Gene Set 0.0003192 126 0.001915 31 NCI_NATURE - Nectin adhesion pathway gene set www.pathwaycomm...
Null S1P1 pathway View Gene Set 0.0004379 71 0.002545 32 NCI_NATURE - S1P1 pathway gene set www.pathwaycomm...
Null EPO signaling pathway View Gene Set 0.0004674 34 0.002634 33 NCI_NATURE - EPO signaling pathway gene set www.pathwaycomm...
Null IL12-mediated signaling events View Gene Set 0.0005072 113 0.002775 34 NCI_NATURE - IL12-mediated signaling events gene set www.pathwaycomm...
Null p75(NTR)-mediated signaling View Gene Set 0.0006928 180 0.003682 35 NCI_NATURE - p75(NTR)-mediated signaling gene set www.pathwaycomm...
Null EPHA forward signaling View Gene Set 0.0007232 31 0.003737 36 NCI_NATURE - EPHA forward signaling gene set www.pathwaycomm...
Null Proteogylcan syndecan-mediated signaling events View Gene Set 0.0008589 875 0.004318 37 NCI_NATURE - Proteogylcan syndecan-mediated signaling events gene set www.pathwaycomm...
Null Regulation of p38-alpha and p38-beta View Gene Set 0.0008981 164 0.004396 38 NCI_NATURE - Regulation of p38-alpha and p38-beta gene set www.pathwaycomm...
Null Arf6 downstream pathway View Gene Set 0.0009413 93 0.004473 39 NCI_NATURE - Arf6 downstream pathway gene set www.pathwaycomm...
Null TCR signaling in na&#xef;ve CD4+ T cells View Gene Set 0.0009618 135 0.004473 39 NCI_NATURE - TCR signaling in na&#xef;ve CD4+ T cells gene set www.pathwaycomm...
Null Signaling events mediated by TCPTP View Gene Set 0.001415 91 0.006421 41 NCI_NATURE - Signaling events mediated by TCPTP gene set www.pathwaycomm...
Null IL12 signaling mediated by STAT4 View Gene Set 0.001476 31 0.006535 42 NCI_NATURE - IL12 signaling mediated by STAT4 gene set www.pathwaycomm...
Null Alpha-synuclein signaling View Gene Set 0.001619 33 0.007002 43 NCI_NATURE - Alpha-synuclein signaling gene set www.pathwaycomm...
Null PDGFR-beta signaling pathway View Gene Set 0.001659 55 0.007012 44 NCI_NATURE - PDGFR-beta signaling pathway gene set www.pathwaycomm...
Null Syndecan-1-mediated signaling events View Gene Set 0.001744 688 0.007209 45 NCI_NATURE - Syndecan-1-mediated signaling events gene set www.pathwaycomm...
Null Glypican pathway View Gene Set 0.002112 937 0.008511 46 NCI_NATURE - Glypican pathway gene set www.pathwaycomm...
Null BMP receptor signaling View Gene Set 0.002169 226 0.008511 46 NCI_NATURE - BMP receptor signaling gene set www.pathwaycomm...
Null CXCR3-mediated signaling events View Gene Set 0.002196 37 0.008511 46 NCI_NATURE - CXCR3-mediated signaling events gene set www.pathwaycomm...
Null Signaling events mediated by Hepatocyte Growth Factor Receptor (c-Met) View Gene Set 0.002499 677 0.009487 49 NCI_NATURE - Signaling events mediated by Hepatocyte Growth Factor Receptor (c-Met) gene set www.pathwaycomm...
Null p38 MAPK signaling pathway View Gene Set 0.002804 189 0.01043 50 NCI_NATURE - p38 MAPK signaling pathway gene set www.pathwaycomm...
Null IL1-mediated signaling events View Gene Set 0.002983 234 0.01088 51 NCI_NATURE - IL1-mediated signaling events gene set www.pathwaycomm...
Null Signaling events mediated by focal adhesion kinase View Gene Set 0.00332 660 0.01187 52 NCI_NATURE - Signaling events mediated by focal adhesion kinase gene set www.pathwaycomm...
Null Neurotrophic factor-mediated Trk receptor signaling View Gene Set 0.003837 103 0.01321 53 NCI_NATURE - Neurotrophic factor-mediated Trk receptor signaling gene set www.pathwaycomm...
Null EPHB forward signaling View Gene Set 0.003824 40 0.01321 53 NCI_NATURE - EPHB forward signaling gene set www.pathwaycomm...
Null Class I PI3K signaling events View Gene Set 0.004289 632 0.0145 55 NCI_NATURE - Class I PI3K signaling events gene set www.pathwaycomm...
Null EPHA2 forward signaling View Gene Set 0.0054 19 0.01794 56 NCI_NATURE - EPHA2 forward signaling gene set www.pathwaycomm...
Null TRAIL signaling pathway View Gene Set 0.005737 686 0.01872 57 NCI_NATURE - TRAIL signaling pathway gene set www.pathwaycomm...
Null TNF receptor signaling pathway View Gene Set 0.006589 299 0.02092 58 NCI_NATURE - TNF receptor signaling pathway gene set www.pathwaycomm...
Null Integrins in angiogenesis View Gene Set 0.006636 66 0.02092 58 NCI_NATURE - Integrins in angiogenesis gene set www.pathwaycomm...
Null Glypican 1 network View Gene Set 0.007203 796 0.02161 60 NCI_NATURE - Glypican 1 network gene set www.pathwaycomm...
Null a6b1 and a6b4 Integrin signaling View Gene Set 0.007018 44 0.02161 60 NCI_NATURE - a6b1 and a6b4 Integrin signaling gene set www.pathwaycomm...
Null FGF signaling pathway View Gene Set 0.007158 48 0.02161 60 NCI_NATURE - FGF signaling pathway gene set www.pathwaycomm...
Null E-cadherin signaling events View Gene Set 0.007326 73 0.02163 63 NCI_NATURE - E-cadherin signaling events gene set www.pathwaycomm...
Null Arf1 pathway View Gene Set 0.008028 20 0.02333 64 NCI_NATURE - Arf1 pathway gene set www.pathwaycomm...
Null Paxillin-dependent events mediated by a4b1 View Gene Set 0.008541 20 0.02407 65 NCI_NATURE - Paxillin-dependent events mediated by a4b1 gene set www.pathwaycomm...
Null Signaling events mediated by VEGFR1 and VEGFR2 View Gene Set 0.00847 69 0.02407 65 NCI_NATURE - Signaling events mediated by VEGFR1 and VEGFR2 gene set www.pathwaycomm...
Null N-cadherin signaling events View Gene Set 0.008915 36 0.02475 67 NCI_NATURE - N-cadherin signaling events gene set www.pathwaycomm...
Null Visual signal transduction: Rods View Gene Set 0.01025 24 0.02784 68 NCI_NATURE - Visual signal transduction: Rods gene set www.pathwaycomm...
Null Trk receptor signaling mediated by PI3K and PLC-gamma View Gene Set 0.01033 63 0.02784 68 NCI_NATURE - Trk receptor signaling mediated by PI3K and PLC-gamma gene set www.pathwaycomm...
Null Fc-epsilon receptor I signaling in mast cells View Gene Set 0.01281 61 0.03404 70 NCI_NATURE - Fc-epsilon receptor I signaling in mast cells gene set www.pathwaycomm...
Null S1P4 pathway View Gene Set 0.01327 14 0.03477 71 NCI_NATURE - S1P4 pathway gene set www.pathwaycomm...
Null Role of Calcineurin-dependent NFAT signaling in lymphocytes View Gene Set 0.01399 95 0.03615 72 NCI_NATURE - Role of Calcineurin-dependent NFAT signaling in lymphocytes gene set www.pathwaycomm...
Null Rapid glucocorticoid signaling View Gene Set 0.0165 9 0.04203 73 NCI_NATURE - Rapid glucocorticoid signaling gene set www.pathwaycomm...

Gene Set Collection: pathwayCommons.reactome

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null Signaling by GPCR View Gene Set 2.602e-11 802 2.906e-08 1 REACTOME - Signaling by GPCR gene set www.pathwaycomm...
Null Signaling in Immune system View Gene Set 6.689e-11 404 3.736e-08 2 REACTOME - Signaling in Immune system gene set www.pathwaycomm...
Null Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell View Gene Set 1.286e-09 60 4.787e-07 3 REACTOME - Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell gene set www.pathwaycomm...
Null Hemostasis View Gene Set 2.534e-09 394 6.591e-07 4 REACTOME - Hemostasis gene set www.pathwaycomm...
Null GPCR ligand binding View Gene Set 2.95e-09 339 6.591e-07 4 REACTOME - GPCR ligand binding gene set www.pathwaycomm...
Null Formation of Platelet plug View Gene Set 1.683e-08 206 3.134e-06 6 REACTOME - Formation of Platelet plug gene set www.pathwaycomm...
Null Synaptic Transmission View Gene Set 1.136e-07 134 1.586e-05 7 REACTOME - Synaptic Transmission gene set www.pathwaycomm...
Null Class A/1 (Rhodopsin-like receptors) View Gene Set 1.121e-07 277 1.586e-05 7 REACTOME - Class A/1 (Rhodopsin-like receptors) gene set www.pathwaycomm...
Null Platelet Activation View Gene Set 1.342e-07 164 1.666e-05 9 REACTOME - Platelet Activation gene set www.pathwaycomm...
Null Transmission across Chemical Synapses View Gene Set 2.673e-07 129 2.986e-05 10 REACTOME - Transmission across Chemical Synapses gene set www.pathwaycomm...
Null GPCR downstream signaling View Gene Set 1.064e-06 595 0.000108 11 REACTOME - GPCR downstream signaling gene set www.pathwaycomm...
Null Axon guidance View Gene Set 2.615e-06 225 0.0002434 12 REACTOME - Axon guidance gene set www.pathwaycomm...
Null Cell surface interactions at the vascular wall View Gene Set 3.173e-06 76 0.0002726 13 REACTOME - Cell surface interactions at the vascular wall gene set www.pathwaycomm...
Null Platelet homeostasis View Gene Set 3.975e-06 50 0.0003171 14 REACTOME - Platelet homeostasis gene set www.pathwaycomm...
Null Interferon alpha/beta signaling View Gene Set 5.42e-06 65 0.0004036 15 REACTOME - Interferon alpha/beta signaling gene set www.pathwaycomm...
Null Aquaporin-mediated transport View Gene Set 7.233e-06 28 0.0005049 16 REACTOME - Aquaporin-mediated transport gene set www.pathwaycomm...
Null Interferon Signaling View Gene Set 9.217e-06 86 0.0006056 17 REACTOME - Interferon Signaling gene set www.pathwaycomm...
Null Signal transduction by L1 View Gene Set 1.053e-05 35 0.0006533 18 REACTOME - Signal transduction by L1 gene set www.pathwaycomm...
Null L1CAM interactions View Gene Set 2.352e-05 83 0.001383 19 REACTOME - L1CAM interactions gene set www.pathwaycomm...
Null Neuroransmitter Receptor Binding And Downstream Transmission In The Postsynaptic Cell View Gene Set 2.61e-05 95 0.001458 20 REACTOME - Neuroransmitter Receptor Binding And Downstream Transmission In The Postsynaptic Cell gene set www.pathwaycomm...
Null Transmembrane transport of small molecules View Gene Set 2.787e-05 367 0.001482 21 REACTOME - Transmembrane transport of small molecules gene set www.pathwaycomm...
Null Unblocking of NMDA receptor glutamate binding and activation View Gene Set 4.75e-05 16 0.002412 22 REACTOME - Unblocking of NMDA receptor glutamate binding and activation gene set www.pathwaycomm... glutamate bindi...
Null Peptide ligand-binding receptors View Gene Set 5.135e-05 167 0.002494 23 REACTOME - Peptide ligand-binding receptors gene set www.pathwaycomm...
Null Nitric oxide stimulates guanylate cyclase View Gene Set 5.385e-05 22 0.002506 24 REACTOME - Nitric oxide stimulates guanylate cyclase gene set www.pathwaycomm...
Null Post NMDA receptor activation events View Gene Set 8.142e-05 34 0.003498 25 REACTOME - Post NMDA receptor activation events gene set www.pathwaycomm...
Null Activation of NMDA receptor upon glutamate binding and postsynaptic events View Gene Set 8.142e-05 34 0.003498 25 REACTOME - Activation of NMDA receptor upon glutamate binding and postsynaptic events gene set www.pathwaycomm...
Null Nef-mediates down modulation of cell surface receptors by recruiting them to clathrin adapters View Gene Set 8.671e-05 21 0.003587 27 REACTOME - Nef-mediates down modulation of cell surface receptors by recruiting them to clathrin adapters gene set www.pathwaycomm...
Null CREB phosphorylation through the activation of Ras View Gene Set 0.0001267 28 0.005054 28 REACTOME - CREB phosphorylation through the activation of Ras gene set www.pathwaycomm...
Null Ras activation uopn Ca2+ infux through NMDA receptor View Gene Set 0.0001653 17 0.006367 29 REACTOME - Ras activation uopn Ca2+ infux through NMDA receptor gene set www.pathwaycomm...
Null Translocation of ZAP-70 to Immunological synapse View Gene Set 0.0001808 11 0.006733 30 REACTOME - Translocation of ZAP-70 to Immunological synapse gene set www.pathwaycomm...
Null Activation of AMPA receptors View Gene Set 0.0002057 11 0.007201 31 REACTOME - Activation of AMPA receptors gene set www.pathwaycomm...
Null Cell junction organization View Gene Set 0.0002063 80 0.007201 31 REACTOME - Cell junction organization gene set www.pathwaycomm...
Null CREB phosphorylation through the activation of CaMKII View Gene Set 0.0003463 17 0.01112 33 REACTOME - CREB phosphorylation through the activation of CaMKII gene set www.pathwaycomm...
Null Interferon gamma signaling View Gene Set 0.0003484 48 0.01112 33 REACTOME - Interferon gamma signaling gene set www.pathwaycomm...
Null Regulation of Water Balance by Renal Aquaporins View Gene Set 0.000334 24 0.01112 33 REACTOME - Regulation of Water Balance by Renal Aquaporins gene set www.pathwaycomm...
Null cGMP effects View Gene Set 0.000386 16 0.01165 36 REACTOME - cGMP effects gene set www.pathwaycomm...
Null G alpha (q) signalling events View Gene Set 0.0003804 121 0.01165 36 REACTOME - G alpha (q) signalling events gene set www.pathwaycomm...
Null Glutamate Binding Activation of AMPA Receptors and Synaptic Plasticity View Gene Set 0.0004004 27 0.0117 38 REACTOME - Glutamate Binding Activation of AMPA Receptors and Synaptic Plasticity gene set www.pathwaycomm... Activation of A...
Null Cell-cell junction organization View Gene Set 0.0004085 45 0.0117 38 REACTOME - Cell-cell junction organization gene set www.pathwaycomm...
Null Interleukin-3 5 and GM-CSF signaling View Gene Set 0.0004667 28 0.01303 40 REACTOME - Interleukin-3 5 and GM-CSF signaling gene set www.pathwaycomm... 5 and GM-CSF si...
Null The role of Nef in HIV-1 replication and disease pathogenesis View Gene Set 0.0006599 28 0.01798 41 REACTOME - The role of Nef in HIV-1 replication and disease pathogenesis gene set www.pathwaycomm...
Null Generation of second messenger molecules View Gene Set 0.0007198 22 0.01914 42 REACTOME - Generation of second messenger molecules gene set www.pathwaycomm...
Null Platelet activation triggers View Gene Set 0.000769 60 0.01998 43 REACTOME - Platelet activation triggers gene set www.pathwaycomm...
Null NCAM1 interactions View Gene Set 0.0009521 23 0.02417 44 REACTOME - NCAM1 interactions gene set www.pathwaycomm...
Null Semaphorin interactions View Gene Set 0.001042 64 0.02586 45 REACTOME - Semaphorin interactions gene set www.pathwaycomm...
Null NrCAM interactions View Gene Set 0.001118 7 0.02715 46 REACTOME - NrCAM interactions gene set www.pathwaycomm...
Null Nef Mediated CD4 Down-regulation View Gene Set 0.001172 9 0.02785 47 REACTOME - Nef Mediated CD4 Down-regulation gene set www.pathwaycomm...
Null Transport of inorganic cations/anions and amino acids/oligopeptides View Gene Set 0.001356 94 0.03154 48 REACTOME - Transport of inorganic cations/anions and amino acids/oligopeptides gene set www.pathwaycomm...
Null ERK/MAPK targets View Gene Set 0.001491 13 0.03398 49 REACTOME - ERK/MAPK targets gene set www.pathwaycomm...
Null Amine compound SLC transporters View Gene Set 0.001772 29 0.03959 50 REACTOME - Amine compound SLC transporters gene set www.pathwaycomm...

Gene Set Collection: miranda.targets

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null hsa-miR-1207-5p View Gene Set 3.143e-23 2608 9.327e-21 1 microRNA targets for hsa-miR-1207-5p from miranda.targets www.mirbase.org...
Null hsa-miR-331-3p View Gene Set 4.133e-23 1191 9.327e-21 1 microRNA targets for hsa-miR-331-3p from miranda.targets www.mirbase.org...
Null hsa-miR-423-5p View Gene Set 1.638e-23 1898 9.327e-21 1 microRNA targets for hsa-miR-423-5p from miranda.targets www.mirbase.org...
Null hsa-miR-608 View Gene Set 1.522e-21 2815 2.575e-19 4 microRNA targets for hsa-miR-608 from miranda.targets www.mirbase.org...
Null hsa-miR-296-5p View Gene Set 5.516e-19 887 7.469e-17 5 microRNA targets for hsa-miR-296-5p from miranda.targets www.mirbase.org...
Null hsa-miR-665 View Gene Set 1.417e-18 1901 1.599e-16 6 microRNA targets for hsa-miR-665 from miranda.targets www.mirbase.org...
Null hsa-miR-486-3p View Gene Set 1.717e-18 1921 1.661e-16 7 microRNA targets for hsa-miR-486-3p from miranda.targets www.mirbase.org...
Null hsa-miR-661 View Gene Set 2.44e-18 2076 2.065e-16 8 microRNA targets for hsa-miR-661 from miranda.targets www.mirbase.org...
Null hsa-miR-1291 View Gene Set 3.945e-16 1386 2.968e-14 9 microRNA targets for hsa-miR-1291 from miranda.targets www.mirbase.org...
Null hsa-miR-637 View Gene Set 1.581e-15 2291 9.732e-14 10 microRNA targets for hsa-miR-637 from miranda.targets www.mirbase.org...
Null hsa-miR-939 View Gene Set 1.515e-15 2203 9.732e-14 10 microRNA targets for hsa-miR-939 from miranda.targets www.mirbase.org...
Null hsa-miR-663 View Gene Set 9e-14 993 5.078e-12 12 microRNA targets for hsa-miR-663 from miranda.targets www.mirbase.org...
Null hsa-miR-765 View Gene Set 1.453e-13 2575 7.568e-12 13 microRNA targets for hsa-miR-765 from miranda.targets www.mirbase.org...
Null hsa-miR-324-3p View Gene Set 6.396e-13 1277 3.093e-11 14 microRNA targets for hsa-miR-324-3p from miranda.targets www.mirbase.org...
Null hsa-miR-328 View Gene Set 6.615e-12 1308 2.986e-10 15 microRNA targets for hsa-miR-328 from miranda.targets www.mirbase.org...
Null hsa-miR-330-5p View Gene Set 8.811e-12 1945 3.728e-10 16 microRNA targets for hsa-miR-330-5p from miranda.targets www.mirbase.org...
Null hsa-miR-1266 View Gene Set 1.017e-11 2015 4.049e-10 17 microRNA targets for hsa-miR-1266 from miranda.targets www.mirbase.org...
Null hsa-miR-149 View Gene Set 1.586e-11 1693 5.964e-10 18 microRNA targets for hsa-miR-149 from miranda.targets www.mirbase.org...
Null hsa-miR-1249 View Gene Set 1.849e-11 586 6.588e-10 19 microRNA targets for hsa-miR-1249 from miranda.targets www.mirbase.org...
Null hsa-miR-744 View Gene Set 2.325e-11 797 7.871e-10 20 microRNA targets for hsa-miR-744 from miranda.targets www.mirbase.org...
Null hsa-miR-1233 View Gene Set 2.775e-11 824 8.947e-10 21 microRNA targets for hsa-miR-1233 from miranda.targets www.mirbase.org...
Null hsa-miR-1225-3p View Gene Set 3.603e-11 950 1.109e-09 22 microRNA targets for hsa-miR-1225-3p from miranda.targets www.mirbase.org...
Null hsa-miR-541 View Gene Set 4.818e-11 1275 1.418e-09 23 microRNA targets for hsa-miR-541 from miranda.targets www.mirbase.org...
Null hsa-miR-24 View Gene Set 8.146e-11 1562 2.298e-09 24 microRNA targets for hsa-miR-24 from miranda.targets www.mirbase.org...
Null hsa-miR-874 View Gene Set 9.505e-11 1222 2.574e-09 25 microRNA targets for hsa-miR-874 from miranda.targets www.mirbase.org...
Null hsa-miR-361-3p View Gene Set 1.094e-10 1615 2.848e-09 26 microRNA targets for hsa-miR-361-3p from miranda.targets www.mirbase.org...
Null hsa-miR-326 View Gene Set 1.718e-10 1567 4.153e-09 27 microRNA targets for hsa-miR-326 from miranda.targets www.mirbase.org...
Null hsa-miR-615-5p View Gene Set 1.679e-10 1189 4.153e-09 27 microRNA targets for hsa-miR-615-5p from miranda.targets www.mirbase.org...
Null hsa-miR-654-5p View Gene Set 3.663e-10 1123 8.551e-09 29 microRNA targets for hsa-miR-654-5p from miranda.targets www.mirbase.org...
Null hsa-miR-1275 View Gene Set 4.051e-10 1509 9.143e-09 30 microRNA targets for hsa-miR-1275 from miranda.targets www.mirbase.org...
Null hsa-miR-1321 View Gene Set 8.788e-10 1850 1.919e-08 31 microRNA targets for hsa-miR-1321 from miranda.targets www.mirbase.org...
Null hsa-miR-760 View Gene Set 1.011e-09 1689 2.138e-08 32 microRNA targets for hsa-miR-760 from miranda.targets www.mirbase.org...
Null hsa-miR-339-5p View Gene Set 1.237e-09 1258 2.537e-08 33 microRNA targets for hsa-miR-339-5p from miranda.targets www.mirbase.org...
Null hsa-miR-296-3p View Gene Set 1.645e-09 1695 3.276e-08 34 microRNA targets for hsa-miR-296-3p from miranda.targets www.mirbase.org...
Null hsa-miR-663b View Gene Set 6.53e-09 871 1.263e-07 35 microRNA targets for hsa-miR-663b from miranda.targets www.mirbase.org...
Null hsa-miR-612 View Gene Set 1.678e-08 2298 3.155e-07 36 microRNA targets for hsa-miR-612 from miranda.targets www.mirbase.org...
Null hsa-miR-1296 View Gene Set 2.162e-08 949 3.956e-07 37 microRNA targets for hsa-miR-1296 from miranda.targets www.mirbase.org...
Null hsa-miR-671-5p View Gene Set 2.397e-08 1578 4.265e-07 38 microRNA targets for hsa-miR-671-5p from miranda.targets www.mirbase.org...
Null hsa-miR-940 View Gene Set 2.457e-08 1873 4.265e-07 38 microRNA targets for hsa-miR-940 from miranda.targets www.mirbase.org...
Null hsa-miR-1207-3p View Gene Set 3.058e-08 1414 5.176e-07 40 microRNA targets for hsa-miR-1207-3p from miranda.targets www.mirbase.org...
Null hsa-miR-485-5p View Gene Set 4.514e-08 1753 7.453e-07 41 microRNA targets for hsa-miR-485-5p from miranda.targets www.mirbase.org...
Null hsa-miR-125b View Gene Set 5.231e-08 1145 8.432e-07 42 microRNA targets for hsa-miR-125b from miranda.targets www.mirbase.org...
Null hsa-miR-1203 View Gene Set 5.687e-08 503 8.954e-07 43 microRNA targets for hsa-miR-1203 from miranda.targets www.mirbase.org...
Null hsa-miR-1224-3p View Gene Set 8.254e-08 1415 1.27e-06 44 microRNA targets for hsa-miR-1224-3p from miranda.targets www.mirbase.org...
Null hsa-miR-146b-3p View Gene Set 3.358e-07 1049 5.052e-06 45 microRNA targets for hsa-miR-146b-3p from miranda.targets www.mirbase.org...
Null hsa-miR-675 View Gene Set 5.394e-07 528 7.938e-06 46 microRNA targets for hsa-miR-675 from miranda.targets www.mirbase.org...
Null hsa-miR-886-5p View Gene Set 7.034e-07 504 1.013e-05 47 microRNA targets for hsa-miR-886-5p from miranda.targets www.mirbase.org...
Null hsa-miR-491-5p View Gene Set 1.026e-06 1297 1.447e-05 48 microRNA targets for hsa-miR-491-5p from miranda.targets www.mirbase.org...
Null hsa-miR-484 View Gene Set 1.448e-06 1263 1.96e-05 49 microRNA targets for hsa-miR-484 from miranda.targets www.mirbase.org...
Null hsa-miR-766 View Gene Set 1.432e-06 1609 1.96e-05 49 microRNA targets for hsa-miR-766 from miranda.targets www.mirbase.org...
Null hsa-miR-1827 View Gene Set 1.488e-06 1819 1.975e-05 51 microRNA targets for hsa-miR-1827 from miranda.targets www.mirbase.org...
Null hsa-miR-323-5p View Gene Set 1.757e-06 821 2.287e-05 52 microRNA targets for hsa-miR-323-5p from miranda.targets www.mirbase.org...
Null hsa-miR-1234 View Gene Set 2.333e-06 510 2.98e-05 53 microRNA targets for hsa-miR-1234 from miranda.targets www.mirbase.org...
Null hsa-miR-1293 View Gene Set 2.765e-06 1294 3.467e-05 54 microRNA targets for hsa-miR-1293 from miranda.targets www.mirbase.org...
Null hsa-miR-623 View Gene Set 4.595e-06 1227 5.656e-05 55 microRNA targets for hsa-miR-623 from miranda.targets www.mirbase.org...
Null hsa-miR-1247 View Gene Set 8.268e-06 575 9.82e-05 56 microRNA targets for hsa-miR-1247 from miranda.targets www.mirbase.org...
Null hsa-miR-492 View Gene Set 8.171e-06 867 9.82e-05 56 microRNA targets for hsa-miR-492 from miranda.targets www.mirbase.org...
Null hsa-miR-1182 View Gene Set 9.476e-06 1715 0.0001095 58 microRNA targets for hsa-miR-1182 from miranda.targets www.mirbase.org...
Null hsa-miR-1254 View Gene Set 9.546e-06 1726 0.0001095 58 microRNA targets for hsa-miR-1254 from miranda.targets www.mirbase.org...
Null hsa-miR-1260 View Gene Set 1.27e-05 1133 0.0001433 60 microRNA targets for hsa-miR-1260 from miranda.targets www.mirbase.org...
Null hsa-miR-214 View Gene Set 1.685e-05 2160 0.000187 61 microRNA targets for hsa-miR-214 from miranda.targets www.mirbase.org...
Null hsa-miR-920 View Gene Set 1.817e-05 1404 0.0001984 62 microRNA targets for hsa-miR-920 from miranda.targets www.mirbase.org...
Null hsa-miR-483-5p View Gene Set 2.118e-05 751 0.0002276 63 microRNA targets for hsa-miR-483-5p from miranda.targets www.mirbase.org...
Null hsa-miR-370 View Gene Set 2.156e-05 1528 0.000228 64 microRNA targets for hsa-miR-370 from miranda.targets www.mirbase.org...
Null hsa-miR-1200 View Gene Set 2.234e-05 1354 0.0002327 65 microRNA targets for hsa-miR-1200 from miranda.targets www.mirbase.org...
Null hsa-miR-1236 View Gene Set 2.672e-05 2376 0.000274 66 microRNA targets for hsa-miR-1236 from miranda.targets www.mirbase.org...
Null hsa-miR-346 View Gene Set 2.736e-05 1001 0.0002764 67 microRNA targets for hsa-miR-346 from miranda.targets www.mirbase.org...
Null hsa-miR-644 View Gene Set 3.502e-05 915 0.0003486 68 microRNA targets for hsa-miR-644 from miranda.targets www.mirbase.org...
Null hsa-miR-151-5p View Gene Set 4.025e-05 625 0.0003949 69 microRNA targets for hsa-miR-151-5p from miranda.targets www.mirbase.org...
Null hsa-miR-631 View Gene Set 5.093e-05 745 0.0004925 70 microRNA targets for hsa-miR-631 from miranda.targets www.mirbase.org...
Null hsa-miR-504 View Gene Set 5.35e-05 939 0.0005102 71 microRNA targets for hsa-miR-504 from miranda.targets www.mirbase.org...
Null hsa-miR-1268 View Gene Set 5.718e-05 508 0.0005377 72 microRNA targets for hsa-miR-1268 from miranda.targets www.mirbase.org...
Null hsa-miR-502-5p View Gene Set 6.035e-05 1080 0.0005597 73 microRNA targets for hsa-miR-502-5p from miranda.targets www.mirbase.org...
Null hsa-miR-34a View Gene Set 7.073e-05 1640 0.0006471 74 microRNA targets for hsa-miR-34a from miranda.targets www.mirbase.org...
Null hsa-miR-125a-5p View Gene Set 9.289e-05 1307 0.0008385 75 microRNA targets for hsa-miR-125a-5p from miranda.targets www.mirbase.org...
Null hsa-miR-342-5p View Gene Set 9.627e-05 861 0.0008576 76 microRNA targets for hsa-miR-342-5p from miranda.targets www.mirbase.org...
Null hsa-miR-508-5p View Gene Set 0.0001041 1429 0.000915 77 microRNA targets for hsa-miR-508-5p from miranda.targets www.mirbase.org...
Null hsa-miR-1205 View Gene Set 0.0001331 1762 0.001155 78 microRNA targets for hsa-miR-1205 from miranda.targets www.mirbase.org...
Null hsa-miR-185 View Gene Set 0.0001384 2402 0.001186 79 microRNA targets for hsa-miR-185 from miranda.targets www.mirbase.org...
Null hsa-miR-611 View Gene Set 0.0001664 441 0.001408 80 microRNA targets for hsa-miR-611 from miranda.targets www.mirbase.org...
Null hsa-miR-483-3p View Gene Set 0.0002253 1065 0.001883 81 microRNA targets for hsa-miR-483-3p from miranda.targets www.mirbase.org...
Null hsa-miR-184 View Gene Set 0.0002288 471 0.001889 82 microRNA targets for hsa-miR-184 from miranda.targets www.mirbase.org...
Null hsa-miR-1202 View Gene Set 0.0003063 1140 0.002499 83 microRNA targets for hsa-miR-1202 from miranda.targets www.mirbase.org...
Null hsa-miR-532-3p View Gene Set 0.0003295 1323 0.002656 84 microRNA targets for hsa-miR-532-3p from miranda.targets www.mirbase.org...
Null hsa-miR-650 View Gene Set 0.0003429 1724 0.002731 85 microRNA targets for hsa-miR-650 from miranda.targets www.mirbase.org...
Null hsa-miR-769-3p View Gene Set 0.0003913 1112 0.00308 86 microRNA targets for hsa-miR-769-3p from miranda.targets www.mirbase.org...
Null hsa-miR-1224-5p View Gene Set 0.000401 911 0.003085 87 microRNA targets for hsa-miR-1224-5p from miranda.targets www.mirbase.org...
Null hsa-miR-198 View Gene Set 0.0003998 1463 0.003085 87 microRNA targets for hsa-miR-198 from miranda.targets www.mirbase.org...
Null hsa-miR-885-3p View Gene Set 0.0004417 989 0.00336 89 microRNA targets for hsa-miR-885-3p from miranda.targets www.mirbase.org...
Null hsa-miR-658 View Gene Set 0.0004468 1103 0.003361 90 microRNA targets for hsa-miR-658 from miranda.targets www.mirbase.org...
Null hsa-miR-1307 View Gene Set 0.0005088 255 0.003785 91 microRNA targets for hsa-miR-1307 from miranda.targets www.mirbase.org...
Null hsa-miR-28-5p View Gene Set 0.0005466 1501 0.004022 92 microRNA targets for hsa-miR-28-5p from miranda.targets www.mirbase.org...
Null hsa-miR-1204 View Gene Set 0.0006981 619 0.005082 93 microRNA targets for hsa-miR-1204 from miranda.targets www.mirbase.org...
Null hsa-miR-138 View Gene Set 0.0007678 1615 0.00553 94 microRNA targets for hsa-miR-138 from miranda.targets www.mirbase.org...
Null hsa-miR-1274a View Gene Set 0.0009041 894 0.006443 95 microRNA targets for hsa-miR-1274a from miranda.targets www.mirbase.org...
Null hsa-miR-596 View Gene Set 0.0009722 925 0.006856 96 microRNA targets for hsa-miR-596 from miranda.targets www.mirbase.org...
Null hsa-miR-432 View Gene Set 0.001182 1906 0.008248 97 microRNA targets for hsa-miR-432 from miranda.targets www.mirbase.org...
Null hsa-miR-1292 View Gene Set 0.001348 665 0.009313 98 microRNA targets for hsa-miR-1292 from miranda.targets www.mirbase.org...
Null hsa-miR-571 View Gene Set 0.001477 966 0.0101 99 microRNA targets for hsa-miR-571 from miranda.targets www.mirbase.org...
Null hsa-miR-923 View Gene Set 0.001492 471 0.0101 99 microRNA targets for hsa-miR-923 from miranda.targets www.mirbase.org...
Null hsa-miR-720 View Gene Set 0.001594 342 0.01068 101 microRNA targets for hsa-miR-720 from miranda.targets www.mirbase.org...
Null hsa-miR-769-5p View Gene Set 0.001623 1003 0.01077 102 microRNA targets for hsa-miR-769-5p from miranda.targets www.mirbase.org...
Null hsa-miR-412 View Gene Set 0.001825 1183 0.012 103 microRNA targets for hsa-miR-412 from miranda.targets www.mirbase.org...
Null hsa-miR-193a-5p View Gene Set 0.001915 1100 0.01247 104 microRNA targets for hsa-miR-193a-5p from miranda.targets www.mirbase.org...
Null hsa-miR-574-3p View Gene Set 0.001994 381 0.01286 105 microRNA targets for hsa-miR-574-3p from miranda.targets www.mirbase.org...
Null hsa-miR-1227 View Gene Set 0.002112 710 0.01347 106 microRNA targets for hsa-miR-1227 from miranda.targets www.mirbase.org...
Null hsa-miR-1231 View Gene Set 0.002129 1050 0.01347 106 microRNA targets for hsa-miR-1231 from miranda.targets www.mirbase.org...
Null hsa-miR-339-3p View Gene Set 0.002237 333 0.01402 108 microRNA targets for hsa-miR-339-3p from miranda.targets www.mirbase.org...
Null hsa-miR-1226 View Gene Set 0.002488 1119 0.01543 109 microRNA targets for hsa-miR-1226 from miranda.targets www.mirbase.org...
Null hsa-miR-1229 View Gene Set 0.002507 1084 0.01543 109 microRNA targets for hsa-miR-1229 from miranda.targets www.mirbase.org...
Null hsa-miR-615-3p View Gene Set 0.002918 476 0.0178 111 microRNA targets for hsa-miR-615-3p from miranda.targets www.mirbase.org...
Null hsa-miR-450b-3p View Gene Set 0.003284 987 0.01985 112 microRNA targets for hsa-miR-450b-3p from miranda.targets www.mirbase.org...
Null hsa-miR-886-3p View Gene Set 0.003864 377 0.02315 113 microRNA targets for hsa-miR-886-3p from miranda.targets www.mirbase.org...
Null hsa-miR-1237 View Gene Set 0.004698 1455 0.0279 114 microRNA targets for hsa-miR-1237 from miranda.targets www.mirbase.org...
Null hsa-miR-1285 View Gene Set 0.004983 1694 0.02933 115 microRNA targets for hsa-miR-1285 from miranda.targets www.mirbase.org...
Null hsa-miR-602 View Gene Set 0.005273 652 0.03078 116 microRNA targets for hsa-miR-602 from miranda.targets www.mirbase.org...
Null hsa-miR-193b View Gene Set 0.005774 857 0.03341 117 microRNA targets for hsa-miR-193b from miranda.targets www.mirbase.org...
Null hsa-miR-593 View Gene Set 0.00596 1337 0.03419 118 microRNA targets for hsa-miR-593 from miranda.targets www.mirbase.org...
Null hsa-miR-566 View Gene Set 0.006566 340 0.03736 119 microRNA targets for hsa-miR-566 from miranda.targets www.mirbase.org...
Null hsa-miR-647 View Gene Set 0.006634 1254 0.03743 120 microRNA targets for hsa-miR-647 from miranda.targets www.mirbase.org...
Null hsa-miR-378 View Gene Set 0.007008 1149 0.03904 121 microRNA targets for hsa-miR-378 from miranda.targets www.mirbase.org...
Null hsa-miR-516b View Gene Set 0.007036 1890 0.03904 121 microRNA targets for hsa-miR-516b from miranda.targets www.mirbase.org...
Null hsa-miR-616 View Gene Set 0.008318 1094 0.04578 123 microRNA targets for hsa-miR-616 from miranda.targets www.mirbase.org...
Null hsa-let-7e View Gene Set 0.008514 1789 0.04648 124 microRNA targets for hsa-let-7e from miranda.targets www.mirbase.org...
Null hsa-miR-1295 View Gene Set 0.009224 247 0.04996 125 microRNA targets for hsa-miR-1295 from miranda.targets www.mirbase.org...

Gene Set Collection: mirbase.targets

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null hsa-miR-296-5p View Gene Set 2.35e-17 755 8.353e-15 1 microRNA targets for hsa-miR-296-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-615-5p View Gene Set 1.234e-17 848 8.353e-15 1 microRNA targets for hsa-miR-615-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-330-5p View Gene Set 3.586e-15 728 8.499e-13 3 microRNA targets for hsa-miR-330-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-326 View Gene Set 1.831e-14 650 3.254e-12 4 microRNA targets for hsa-miR-326 from mirbase.targets www.mirbase.org...
Null hsa-miR-486-3p View Gene Set 5.989e-13 773 8.517e-11 5 microRNA targets for hsa-miR-486-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-328 View Gene Set 8.834e-13 685 1.047e-10 6 microRNA targets for hsa-miR-328 from mirbase.targets www.mirbase.org...
Null hsa-miR-663 View Gene Set 1.216e-12 743 1.235e-10 7 microRNA targets for hsa-miR-663 from mirbase.targets www.mirbase.org...
Null hsa-miR-939 View Gene Set 1.429e-12 667 1.27e-10 8 microRNA targets for hsa-miR-939 from mirbase.targets www.mirbase.org...
Null hsa-miR-331-3p View Gene Set 3.42e-12 712 2.55e-10 9 microRNA targets for hsa-miR-331-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-339-5p View Gene Set 3.586e-12 659 2.55e-10 9 microRNA targets for hsa-miR-339-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-484 View Gene Set 1.88e-11 733 1.215e-09 11 microRNA targets for hsa-miR-484 from mirbase.targets www.mirbase.org...
Null hsa-miR-608 View Gene Set 6.644e-11 729 3.936e-09 12 microRNA targets for hsa-miR-608 from mirbase.targets www.mirbase.org...
Null hsa-miR-214 View Gene Set 3.85e-10 797 1.813e-08 13 microRNA targets for hsa-miR-214 from mirbase.targets www.mirbase.org...
Null hsa-miR-342-5p View Gene Set 4.08e-10 698 1.813e-08 13 microRNA targets for hsa-miR-342-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-920 View Gene Set 3.784e-10 661 1.813e-08 13 microRNA targets for hsa-miR-920 from mirbase.targets www.mirbase.org...
Null hsa-miR-92b* View Gene Set 3.596e-10 648 1.813e-08 13 microRNA targets for hsa-miR-92b* from mirbase.targets www.mirbase.org...
Null hsa-miR-744 View Gene Set 4.35e-10 715 1.819e-08 17 microRNA targets for hsa-miR-744 from mirbase.targets www.mirbase.org...
Null hsa-miR-504 View Gene Set 4.843e-10 621 1.913e-08 18 microRNA targets for hsa-miR-504 from mirbase.targets www.mirbase.org...
Null hsa-miR-769-5p View Gene Set 5.454e-10 790 2.041e-08 19 microRNA targets for hsa-miR-769-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-615-3p View Gene Set 1.252e-09 757 4.449e-08 20 microRNA targets for hsa-miR-615-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-874 View Gene Set 1.582e-09 722 5.356e-08 21 microRNA targets for hsa-miR-874 from mirbase.targets www.mirbase.org...
Null hsa-miR-483-3p View Gene Set 1.844e-09 702 5.959e-08 22 microRNA targets for hsa-miR-483-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-631 View Gene Set 4.941e-09 714 1.527e-07 23 microRNA targets for hsa-miR-631 from mirbase.targets www.mirbase.org...
Null hsa-miR-760 View Gene Set 5.422e-09 690 1.606e-07 24 microRNA targets for hsa-miR-760 from mirbase.targets www.mirbase.org...
Null hsa-miR-324-3p View Gene Set 5.988e-09 788 1.703e-07 25 microRNA targets for hsa-miR-324-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-886-5p View Gene Set 1.446e-08 793 3.954e-07 26 microRNA targets for hsa-miR-886-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-637 View Gene Set 1.879e-08 672 4.948e-07 27 microRNA targets for hsa-miR-637 from mirbase.targets www.mirbase.org...
Null hsa-miR-146b-3p View Gene Set 2.144e-08 695 5.445e-07 28 microRNA targets for hsa-miR-146b-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-149 View Gene Set 2.791e-08 602 6.843e-07 29 microRNA targets for hsa-miR-149 from mirbase.targets www.mirbase.org...
Null hsa-miR-324-5p View Gene Set 4.138e-08 801 9.807e-07 30 microRNA targets for hsa-miR-324-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-125b View Gene Set 4.924e-08 831 1.119e-06 31 microRNA targets for hsa-miR-125b from mirbase.targets www.mirbase.org...
Null hsa-miR-296-3p View Gene Set 5.038e-08 905 1.119e-06 31 microRNA targets for hsa-miR-296-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-185* View Gene Set 5.395e-08 506 1.161e-06 33 microRNA targets for hsa-miR-185* from mirbase.targets www.mirbase.org...
Null hsa-miR-92a-2* View Gene Set 5.554e-08 654 1.161e-06 33 microRNA targets for hsa-miR-92a-2* from mirbase.targets www.mirbase.org...
Null hsa-miR-596 View Gene Set 7.169e-08 644 1.456e-06 35 microRNA targets for hsa-miR-596 from mirbase.targets www.mirbase.org...
Null hsa-miR-665 View Gene Set 8.159e-08 617 1.611e-06 36 microRNA targets for hsa-miR-665 from mirbase.targets www.mirbase.org...
Null hsa-miR-623 View Gene Set 8.407e-08 693 1.616e-06 37 microRNA targets for hsa-miR-623 from mirbase.targets www.mirbase.org...
Null hsa-miR-532-3p View Gene Set 8.722e-08 657 1.632e-06 38 microRNA targets for hsa-miR-532-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-654-5p View Gene Set 1.259e-07 718 2.295e-06 39 microRNA targets for hsa-miR-654-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-423-5p View Gene Set 1.704e-07 767 3.029e-06 40 microRNA targets for hsa-miR-423-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-24 View Gene Set 2.543e-07 739 4.411e-06 41 microRNA targets for hsa-miR-24 from mirbase.targets www.mirbase.org...
Null hsa-miR-668 View Gene Set 3.473e-07 560 5.487e-06 42 microRNA targets for hsa-miR-668 from mirbase.targets www.mirbase.org...
Null hsa-miR-675 View Gene Set 3.412e-07 686 5.487e-06 42 microRNA targets for hsa-miR-675 from mirbase.targets www.mirbase.org...
Null hsa-miR-765 View Gene Set 3.424e-07 674 5.487e-06 42 microRNA targets for hsa-miR-765 from mirbase.targets www.mirbase.org...
Null hsa-miR-940 View Gene Set 3.349e-07 660 5.487e-06 42 microRNA targets for hsa-miR-940 from mirbase.targets www.mirbase.org...
Null hsa-miR-339-3p View Gene Set 4.411e-07 797 6.673e-06 46 microRNA targets for hsa-miR-339-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-572 View Gene Set 4.406e-07 602 6.673e-06 46 microRNA targets for hsa-miR-572 from mirbase.targets www.mirbase.org...
Null hsa-miR-361-3p View Gene Set 5.443e-07 634 8.062e-06 48 microRNA targets for hsa-miR-361-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-432* View Gene Set 5.696e-07 544 8.264e-06 49 microRNA targets for hsa-miR-432* from mirbase.targets www.mirbase.org...
Null hsa-miR-622 View Gene Set 7.742e-07 635 1.101e-05 50 microRNA targets for hsa-miR-622 from mirbase.targets www.mirbase.org...
Null hsa-miR-492 View Gene Set 8.171e-07 625 1.139e-05 51 microRNA targets for hsa-miR-492 from mirbase.targets www.mirbase.org...
Null hsa-miR-220c View Gene Set 8.716e-07 831 1.192e-05 52 microRNA targets for hsa-miR-220c from mirbase.targets www.mirbase.org...
Null hsa-miR-541 View Gene Set 9.094e-07 711 1.22e-05 53 microRNA targets for hsa-miR-541 from mirbase.targets www.mirbase.org...
Null hsa-miR-612 View Gene Set 1.055e-06 685 1.374e-05 54 microRNA targets for hsa-miR-612 from mirbase.targets www.mirbase.org...
Null hsa-miR-647 View Gene Set 1.063e-06 724 1.374e-05 54 microRNA targets for hsa-miR-647 from mirbase.targets www.mirbase.org...
Null hsa-miR-370 View Gene Set 1.084e-06 710 1.376e-05 56 microRNA targets for hsa-miR-370 from mirbase.targets www.mirbase.org...
Null hsa-miR-564 View Gene Set 1.577e-06 706 1.949e-05 57 microRNA targets for hsa-miR-564 from mirbase.targets www.mirbase.org...
Null hsa-miR-877* View Gene Set 1.618e-06 479 1.949e-05 57 microRNA targets for hsa-miR-877* from mirbase.targets www.mirbase.org...
Null hsa-miR-92a-1* View Gene Set 1.595e-06 661 1.949e-05 57 microRNA targets for hsa-miR-92a-1* from mirbase.targets www.mirbase.org...
Null hsa-miR-125a-5p View Gene Set 1.695e-06 817 2.009e-05 60 microRNA targets for hsa-miR-125a-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-565 View Gene Set 3.151e-06 689 3.673e-05 61 microRNA targets for hsa-miR-565 from mirbase.targets www.mirbase.org...
Null hsa-miR-642 View Gene Set 3.643e-06 609 4.178e-05 62 microRNA targets for hsa-miR-642 from mirbase.targets www.mirbase.org...
Null hsa-miR-125a-3p View Gene Set 4.085e-06 829 4.538e-05 63 microRNA targets for hsa-miR-125a-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-505* View Gene Set 4.048e-06 516 4.538e-05 63 microRNA targets for hsa-miR-505* from mirbase.targets www.mirbase.org...
Null hsa-miR-885-3p View Gene Set 4.397e-06 799 4.81e-05 65 microRNA targets for hsa-miR-885-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-639 View Gene Set 5.133e-06 561 5.53e-05 66 microRNA targets for hsa-miR-639 from mirbase.targets www.mirbase.org...
Null hsa-miR-766 View Gene Set 7.032e-06 517 7.463e-05 67 microRNA targets for hsa-miR-766 from mirbase.targets www.mirbase.org...
Null hsa-miR-23a* View Gene Set 8.526e-06 604 8.914e-05 68 microRNA targets for hsa-miR-23a* from mirbase.targets www.mirbase.org...
Null hsa-miR-323-5p View Gene Set 9.056e-06 763 9.331e-05 69 microRNA targets for hsa-miR-323-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-151-5p View Gene Set 9.46e-06 749 9.418e-05 70 microRNA targets for hsa-miR-151-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-345 View Gene Set 9.538e-06 696 9.418e-05 70 microRNA targets for hsa-miR-345 from mirbase.targets www.mirbase.org...
Null hsa-miR-661 View Gene Set 9.469e-06 575 9.418e-05 70 microRNA targets for hsa-miR-661 from mirbase.targets www.mirbase.org...
Null hsa-miR-769-3p View Gene Set 1.356e-05 823 0.0001321 73 microRNA targets for hsa-miR-769-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-30b* View Gene Set 1.424e-05 655 0.0001368 74 microRNA targets for hsa-miR-30b* from mirbase.targets www.mirbase.org...
Null hsa-miR-638 View Gene Set 1.495e-05 639 0.0001418 75 microRNA targets for hsa-miR-638 from mirbase.targets www.mirbase.org...
Null hsa-miR-491-5p View Gene Set 1.543e-05 731 0.0001444 76 microRNA targets for hsa-miR-491-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-490-5p View Gene Set 1.774e-05 702 0.0001638 77 microRNA targets for hsa-miR-490-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-204 View Gene Set 2.046e-05 640 0.0001865 78 microRNA targets for hsa-miR-204 from mirbase.targets www.mirbase.org...
Null hsa-miR-422a View Gene Set 2.088e-05 755 0.0001879 79 microRNA targets for hsa-miR-422a from mirbase.targets www.mirbase.org...
Null hsa-miR-671-5p View Gene Set 2.947e-05 813 0.0002619 80 microRNA targets for hsa-miR-671-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-423-3p View Gene Set 3.076e-05 741 0.00027 81 microRNA targets for hsa-miR-423-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-193a-5p View Gene Set 3.133e-05 767 0.0002717 82 microRNA targets for hsa-miR-193a-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-554 View Gene Set 3.393e-05 708 0.0002906 83 microRNA targets for hsa-miR-554 from mirbase.targets www.mirbase.org...
Null hsa-miR-30c-1* View Gene Set 3.57e-05 741 0.0003022 84 microRNA targets for hsa-miR-30c-1* from mirbase.targets www.mirbase.org...
Null hsa-miR-658 View Gene Set 4.641e-05 660 0.0003882 85 microRNA targets for hsa-miR-658 from mirbase.targets www.mirbase.org...
Null hsa-miR-149* View Gene Set 4.795e-05 459 0.0003964 86 microRNA targets for hsa-miR-149* from mirbase.targets www.mirbase.org...
Null hsa-miR-25* View Gene Set 5.049e-05 418 0.0004126 87 microRNA targets for hsa-miR-25* from mirbase.targets www.mirbase.org...
Null hsa-miR-218-1* View Gene Set 6.047e-05 528 0.0004886 88 microRNA targets for hsa-miR-218-1* from mirbase.targets www.mirbase.org...
Null hsa-miR-525-3p View Gene Set 6.547e-05 790 0.0005231 89 microRNA targets for hsa-miR-525-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-194* View Gene Set 7.266e-05 502 0.000574 90 microRNA targets for hsa-miR-194* from mirbase.targets www.mirbase.org...
Null hsa-miR-432 View Gene Set 0.0001009 691 0.0007887 91 microRNA targets for hsa-miR-432 from mirbase.targets www.mirbase.org...
Null hsa-miR-18a* View Gene Set 0.0001285 491 0.000993 92 microRNA targets for hsa-miR-18a* from mirbase.targets www.mirbase.org...
Null hsa-miR-671-3p View Gene Set 0.000135 767 0.001032 93 microRNA targets for hsa-miR-671-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-609 View Gene Set 0.0001572 687 0.001189 94 microRNA targets for hsa-miR-609 from mirbase.targets www.mirbase.org...
Null hsa-miR-30c-2* View Gene Set 0.0001598 758 0.001196 95 microRNA targets for hsa-miR-30c-2* from mirbase.targets www.mirbase.org...
Null hsa-miR-23b* View Gene Set 0.0002041 544 0.001511 96 microRNA targets for hsa-miR-23b* from mirbase.targets www.mirbase.org...
Null hsa-miR-133b View Gene Set 0.0002067 770 0.001515 97 microRNA targets for hsa-miR-133b from mirbase.targets www.mirbase.org...
Null hsa-miR-512-5p View Gene Set 0.0002103 693 0.001526 98 microRNA targets for hsa-miR-512-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-525-5p View Gene Set 0.0002209 784 0.001586 99 microRNA targets for hsa-miR-525-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-937 View Gene Set 0.0002413 654 0.001716 100 microRNA targets for hsa-miR-937 from mirbase.targets www.mirbase.org...
Null hsa-miR-198 View Gene Set 0.0002615 783 0.001841 101 microRNA targets for hsa-miR-198 from mirbase.targets www.mirbase.org...
Null hsa-miR-129-3p View Gene Set 0.0002755 712 0.001921 102 microRNA targets for hsa-miR-129-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-560 View Gene Set 0.000319 730 0.002197 103 microRNA targets for hsa-miR-560 from mirbase.targets www.mirbase.org...
Null hsa-miR-625 View Gene Set 0.0003214 650 0.002197 103 microRNA targets for hsa-miR-625 from mirbase.targets www.mirbase.org...
Null hsa-miR-744* View Gene Set 0.000338 472 0.002289 105 microRNA targets for hsa-miR-744* from mirbase.targets www.mirbase.org...
Null hsa-miR-127-3p View Gene Set 0.0003527 653 0.002366 106 microRNA targets for hsa-miR-127-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-483-5p View Gene Set 0.0003925 717 0.002608 107 microRNA targets for hsa-miR-483-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-485-5p View Gene Set 0.0005189 556 0.003416 108 microRNA targets for hsa-miR-485-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-601 View Gene Set 0.0005288 699 0.003449 109 microRNA targets for hsa-miR-601 from mirbase.targets www.mirbase.org...
Null hsa-miR-650 View Gene Set 0.000592 693 0.003827 110 microRNA targets for hsa-miR-650 from mirbase.targets www.mirbase.org...
Null hsa-miR-602 View Gene Set 0.0005989 710 0.003836 111 microRNA targets for hsa-miR-602 from mirbase.targets www.mirbase.org...
Null hsa-miR-662 View Gene Set 0.0006159 663 0.00391 112 microRNA targets for hsa-miR-662 from mirbase.targets www.mirbase.org...
Null hsa-miR-298 View Gene Set 0.0006316 716 0.003974 113 microRNA targets for hsa-miR-298 from mirbase.targets www.mirbase.org...
Null hsa-miR-93* View Gene Set 0.0006682 622 0.004167 114 microRNA targets for hsa-miR-93* from mirbase.targets www.mirbase.org...
Null hsa-miR-768-5p View Gene Set 0.0007004 763 0.004331 115 microRNA targets for hsa-miR-768-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-188-5p View Gene Set 0.0007305 732 0.004478 116 microRNA targets for hsa-miR-188-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-412 View Gene Set 0.0009439 627 0.005712 117 microRNA targets for hsa-miR-412 from mirbase.targets www.mirbase.org...
Null hsa-miR-611 View Gene Set 0.000948 671 0.005712 117 microRNA targets for hsa-miR-611 from mirbase.targets www.mirbase.org...
Null hsa-miR-133a View Gene Set 0.001083 763 0.00647 119 microRNA targets for hsa-miR-133a from mirbase.targets www.mirbase.org...
Null hsa-miR-33b* View Gene Set 0.001115 577 0.006606 120 microRNA targets for hsa-miR-33b* from mirbase.targets www.mirbase.org...
Null hsa-miR-892b View Gene Set 0.001138 726 0.00669 121 microRNA targets for hsa-miR-892b from mirbase.targets www.mirbase.org...
Null hsa-miR-502-5p View Gene Set 0.00125 730 0.007283 122 microRNA targets for hsa-miR-502-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-524-3p View Gene Set 0.001293 791 0.007475 123 microRNA targets for hsa-miR-524-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-588 View Gene Set 0.001428 660 0.008187 124 microRNA targets for hsa-miR-588 from mirbase.targets www.mirbase.org...
Null hsa-miR-129* View Gene Set 0.001464 504 0.008327 125 microRNA targets for hsa-miR-129* from mirbase.targets www.mirbase.org...
Null hsa-miR-128a View Gene Set 0.001564 811 0.008755 126 microRNA targets for hsa-miR-128a from mirbase.targets www.mirbase.org...
Null hsa-miR-205 View Gene Set 0.001553 687 0.008755 126 microRNA targets for hsa-miR-205 from mirbase.targets www.mirbase.org...
Null hsa-miR-933 View Gene Set 0.001579 618 0.008769 128 microRNA targets for hsa-miR-933 from mirbase.targets www.mirbase.org...
Null hsa-miR-193b* View Gene Set 0.001644 586 0.00906 129 microRNA targets for hsa-miR-193b* from mirbase.targets www.mirbase.org...
Null hsa-miR-943 View Gene Set 0.001663 680 0.009095 130 microRNA targets for hsa-miR-943 from mirbase.targets www.mirbase.org...
Null hsa-miR-508-5p View Gene Set 0.001919 572 0.01038 131 microRNA targets for hsa-miR-508-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-542-5p View Gene Set 0.001926 774 0.01038 131 microRNA targets for hsa-miR-542-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-188-3p View Gene Set 0.00206 637 0.01101 133 microRNA targets for hsa-miR-188-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-672 View Gene Set 0.002222 608 0.01179 134 microRNA targets for hsa-miR-672 from mirbase.targets www.mirbase.org...
Null hsa-miR-10b View Gene Set 0.002286 693 0.01204 135 microRNA targets for hsa-miR-10b from mirbase.targets www.mirbase.org...
Null hsa-miR-221* View Gene Set 0.002353 525 0.0123 136 microRNA targets for hsa-miR-221* from mirbase.targets www.mirbase.org...
Null hsa-miR-125b-1* View Gene Set 0.002373 622 0.01231 137 microRNA targets for hsa-miR-125b-1* from mirbase.targets www.mirbase.org...
Null hsa-miR-659 View Gene Set 0.002519 705 0.01298 138 microRNA targets for hsa-miR-659 from mirbase.targets www.mirbase.org...
Null hsa-miR-132* View Gene Set 0.002577 481 0.01318 139 microRNA targets for hsa-miR-132* from mirbase.targets www.mirbase.org...
Null hsa-miR-193b View Gene Set 0.00273 716 0.01386 140 microRNA targets for hsa-miR-193b from mirbase.targets www.mirbase.org...
Null hsa-miR-211 View Gene Set 0.002762 554 0.01393 141 microRNA targets for hsa-miR-211 from mirbase.targets www.mirbase.org...
Null hsa-miR-645 View Gene Set 0.002977 569 0.01491 142 microRNA targets for hsa-miR-645 from mirbase.targets www.mirbase.org...
Null hsa-miR-674 View Gene Set 0.003084 788 0.01533 143 microRNA targets for hsa-miR-674 from mirbase.targets www.mirbase.org...
Null hsa-miR-135a* View Gene Set 0.003338 615 0.01648 144 microRNA targets for hsa-miR-135a* from mirbase.targets www.mirbase.org...
Null hsa-miR-604 View Gene Set 0.003651 691 0.0179 145 microRNA targets for hsa-miR-604 from mirbase.targets www.mirbase.org...
Null hsa-miR-191* View Gene Set 0.003795 462 0.01848 146 microRNA targets for hsa-miR-191* from mirbase.targets www.mirbase.org...
Null hsa-miR-593* View Gene Set 0.004 504 0.01934 147 microRNA targets for hsa-miR-593* from mirbase.targets www.mirbase.org...
Null hsa-miR-551a View Gene Set 0.004222 676 0.02028 148 microRNA targets for hsa-miR-551a from mirbase.targets www.mirbase.org...
Null hsa-miR-454* View Gene Set 0.004408 429 0.02104 149 microRNA targets for hsa-miR-454* from mirbase.targets www.mirbase.org...
Null hsa-miR-34c-5p View Gene Set 0.004509 879 0.02137 150 microRNA targets for hsa-miR-34c-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-346 View Gene Set 0.005029 568 0.02368 151 microRNA targets for hsa-miR-346 from mirbase.targets www.mirbase.org...
Null hsa-miR-15a* View Gene Set 0.005425 554 0.02538 152 microRNA targets for hsa-miR-15a* from mirbase.targets www.mirbase.org...
Null hsa-miR-130b* View Gene Set 0.005854 465 0.0272 153 microRNA targets for hsa-miR-130b* from mirbase.targets www.mirbase.org...
Null hsa-miR-886-3p View Gene Set 0.00616 745 0.02844 154 microRNA targets for hsa-miR-886-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-17* View Gene Set 0.006269 569 0.02875 155 microRNA targets for hsa-miR-17* from mirbase.targets www.mirbase.org...
Null hsa-miR-632 View Gene Set 0.00665 690 0.03031 156 microRNA targets for hsa-miR-632 from mirbase.targets www.mirbase.org...
Null hsa-miR-877 View Gene Set 0.006751 668 0.03057 157 microRNA targets for hsa-miR-877 from mirbase.targets www.mirbase.org...
Null hsa-miR-18b* View Gene Set 0.006934 565 0.0312 158 microRNA targets for hsa-miR-18b* from mirbase.targets www.mirbase.org...
Null hsa-miR-644 View Gene Set 0.006979 692 0.03121 159 microRNA targets for hsa-miR-644 from mirbase.targets www.mirbase.org...
Null hsa-miR-657 View Gene Set 0.007227 718 0.03212 160 microRNA targets for hsa-miR-657 from mirbase.targets www.mirbase.org...
Null hsa-miR-27a* View Gene Set 0.007842 616 0.03422 161 microRNA targets for hsa-miR-27a* from mirbase.targets www.mirbase.org...
Null hsa-miR-299-3p View Gene Set 0.007846 732 0.03422 161 microRNA targets for hsa-miR-299-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-767-3p View Gene Set 0.007779 784 0.03422 161 microRNA targets for hsa-miR-767-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-210 View Gene Set 0.009143 703 0.03964 164 microRNA targets for hsa-miR-210 from mirbase.targets www.mirbase.org...
Null hsa-miR-614 View Gene Set 0.009258 578 0.03989 165 microRNA targets for hsa-miR-614 from mirbase.targets www.mirbase.org...
Null hsa-miR-26b* View Gene Set 0.009458 555 0.04051 166 microRNA targets for hsa-miR-26b* from mirbase.targets www.mirbase.org...
Null hsa-miR-941 View Gene Set 0.01007 590 0.04285 167 microRNA targets for hsa-miR-941 from mirbase.targets www.mirbase.org...
Null hsa-miR-139-3p View Gene Set 0.01035 736 0.04382 168 microRNA targets for hsa-miR-139-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-10a View Gene Set 0.01051 709 0.04421 169 microRNA targets for hsa-miR-10a from mirbase.targets www.mirbase.org...
Null hsa-miR-923 View Gene Set 0.01066 690 0.04457 170 microRNA targets for hsa-miR-923 from mirbase.targets www.mirbase.org...
Null hsa-miR-378 View Gene Set 0.01129 720 0.04695 171 microRNA targets for hsa-miR-378 from mirbase.targets www.mirbase.org...
Null hsa-miR-518c* View Gene Set 0.01197 606 0.04947 172 microRNA targets for hsa-miR-518c* from mirbase.targets www.mirbase.org...
Null hsa-miR-138 View Gene Set 0.01208 730 0.04963 173 microRNA targets for hsa-miR-138 from mirbase.targets www.mirbase.org...

Gene Set Collection: mirtarget2.targets

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null hsa-miR-608 View Gene Set 9.358e-07 308 0.0005175 1 microRNA targets for hsa-miR-608 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-661 View Gene Set 1.433e-05 223 0.003963 2 microRNA targets for hsa-miR-661 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-486-3p View Gene Set 2.402e-05 191 0.004428 3 microRNA targets for hsa-miR-486-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-765 View Gene Set 4.296e-05 305 0.005939 4 microRNA targets for hsa-miR-765 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-663 View Gene Set 0.000453 53 0.04531 5 microRNA targets for hsa-miR-663 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-665 View Gene Set 0.0004916 342 0.04531 5 microRNA targets for hsa-miR-665 from mirtarget2.targets www.mirbase.org...

Gene Set Collection: pictar.targets

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null hsa-miR-326 View Gene Set 1.721e-06 265 0.0003063 1 microRNA targets for hsa-miR-326 from pictar.targets www.mirbase.org...
Null hsa-miR-331 View Gene Set 9.314e-06 194 0.0008289 2 microRNA targets for hsa-miR-331 from pictar.targets www.mirbase.org...
Null hsa-miR-328 View Gene Set 0.0001504 204 0.008921 3 microRNA targets for hsa-miR-328 from pictar.targets www.mirbase.org...
Null hsa-miR-185 View Gene Set 0.0003224 266 0.01434 4 microRNA targets for hsa-miR-185 from pictar.targets www.mirbase.org...

Gene Set Collection: targetscan.targets

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null hsa-miR-326 View Gene Set 1.01e-05 275 0.001232 1 microRNA targets for hsa-miR-326 from targetscan.targets www.mirbase.org...
Null hsa-miR-330-5p View Gene Set 1.01e-05 275 0.001232 1 microRNA targets for hsa-miR-330-5p from targetscan.targets www.mirbase.org...
Null hsa-miR-24 View Gene Set 7.946e-05 439 0.006463 3 microRNA targets for hsa-miR-24 from targetscan.targets www.mirbase.org...
Null hsa-miR-214 View Gene Set 0.0001528 409 0.009319 4 microRNA targets for hsa-miR-214 from targetscan.targets www.mirbase.org...
Null hsa-miR-149 View Gene Set 0.0002175 265 0.01061 5 microRNA targets for hsa-miR-149 from targetscan.targets www.mirbase.org...

Gene Set Collection: miRNAtargetUnion

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-608 View Gene Set 6.424e-30 3384 1.487e-26 1 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-608 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-296-5p View Gene Set 2.11e-29 1519 2.441e-26 2 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-296-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-331-3p View Gene Set 5.122e-27 1764 3.95e-24 3 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-331-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-423-5p View Gene Set 3.767e-26 2496 1.743e-23 4 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-423-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-486-3p View Gene Set 3.121e-26 2545 1.743e-23 4 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-486-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-939 View Gene Set 9.288e-25 2729 3.582e-22 6 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-939 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-665 View Gene Set 3.09e-24 2514 1.022e-21 7 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-665 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-661 View Gene Set 1.018e-23 2615 2.944e-21 8 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-661 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-330-5p View Gene Set 1.15e-22 2574 2.957e-20 9 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-330-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-326 View Gene Set 1.077e-21 2156 2.493e-19 10 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-326 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-663 View Gene Set 1.618e-21 1582 3.404e-19 11 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-663 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-326 View Gene Set 2.341e-21 2171 4.514e-19 12 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-326 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-615-5p View Gene Set 4.269e-21 1865 7.599e-19 13 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-615-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-328 View Gene Set 6.783e-21 1892 1.121e-18 14 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-328 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-328 View Gene Set 7.656e-21 1838 1.181e-18 15 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-328 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-326 View Gene Set 4.338e-20 2147 6.274e-18 16 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-326 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-330-5p View Gene Set 4.92e-20 2597 6.697e-18 17 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-330-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-328 View Gene Set 9.433e-20 1858 1.213e-17 18 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-328 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-637 View Gene Set 3.587e-19 2846 4.368e-17 19 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-637 from miRNAtargetUnion www.mirbase.org...
Null mirbase.pictar.targetscan.targetsUnion.hsa-miR-326 View Gene Set 5.019e-19 1071 5.806e-17 20 microRNA targets for mirbase.pictar.targetscan.targetsUnion.hsa-miR-326 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-744 View Gene Set 6.202e-18 1378 6.834e-16 21 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-744 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-324-3p View Gene Set 7.59e-18 1946 7.983e-16 22 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-324-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-765 View Gene Set 2.446e-17 3105 2.461e-15 23 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-765 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-149 View Gene Set 7.626e-17 2203 7.352e-15 24 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-149 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-149 View Gene Set 9.013e-17 2201 8.343e-15 25 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-149 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-326 View Gene Set 1.372e-16 1065 1.221e-14 26 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-326 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-324-3p View Gene Set 1.584e-16 1941 1.358e-14 27 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-324-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-760 View Gene Set 3.345e-16 2252 2.765e-14 28 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-760 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-149 View Gene Set 5.225e-16 2200 4.169e-14 29 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-149 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-24 View Gene Set 7.698e-16 2258 5.938e-14 30 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-24 from miRNAtargetUnion www.mirbase.org...
Null mirbase.pictar.targetscan.targetsUnion.hsa-miR-328 View Gene Set 8.223e-16 916 6.138e-14 31 microRNA targets for mirbase.pictar.targetscan.targetsUnion.hsa-miR-328 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-326 View Gene Set 9.244e-16 1066 6.685e-14 32 microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-326 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-541 View Gene Set 1.028e-15 1832 7.21e-14 33 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-541 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-339-5p View Gene Set 1.247e-15 1899 8.486e-14 34 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-339-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-654-5p View Gene Set 3.015e-15 1681 1.993e-13 35 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-654-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-874 View Gene Set 4.583e-15 1840 2.946e-13 36 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-874 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-24 View Gene Set 5.112e-15 2189 3.197e-13 37 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-24 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-330-5p View Gene Set 8.26e-15 1142 5.03e-13 38 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-330-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-874 View Gene Set 1.11e-14 1806 6.588e-13 39 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-874 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.tarbase.targetsUnion.hsa-miR-24 View Gene Set 1.553e-14 2089 8.985e-13 40 microRNA targets for miranda.mirbase.tarbase.targetsUnion.hsa-miR-24 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-339-5p View Gene Set 2.141e-14 1790 1.208e-12 41 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-339-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-296-3p View Gene Set 6.347e-14 2397 3.497e-12 42 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-296-3p from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-328 View Gene Set 7.747e-14 946 4.169e-12 43 microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-328 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-330-5p View Gene Set 8.134e-14 2177 4.278e-12 44 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-330-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.pictar.targetscan.targetsUnion.hsa-miR-326 View Gene Set 1.028e-13 1813 5.287e-12 45 microRNA targets for miranda.pictar.targetscan.targetsUnion.hsa-miR-326 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-24 View Gene Set 1.486e-13 2222 7.473e-12 46 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-24 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-296-3p View Gene Set 1.631e-13 2354 8.031e-12 47 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-296-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-484 View Gene Set 1.802e-13 1853 8.689e-12 48 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-484 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-361-3p View Gene Set 4.199e-13 2123 1.983e-11 49 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-361-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-326 View Gene Set 4.605e-13 1819 2.11e-11 50 microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-326 from miRNAtargetUnion www.mirbase.org...
Null miranda.pictar.targetscan.targetsUnion.hsa-miR-328 View Gene Set 4.65e-13 1435 2.11e-11 50 microRNA targets for miranda.pictar.targetscan.targetsUnion.hsa-miR-328 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-326 View Gene Set 7.344e-13 1789 3.268e-11 52 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-326 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-328 View Gene Set 8.561e-13 872 3.738e-11 53 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-328 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-940 View Gene Set 1.238e-12 2504 5.304e-11 54 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-940 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-24 View Gene Set 1.972e-12 1845 8.298e-11 55 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-24 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-149 View Gene Set 2.635e-12 1882 1.089e-10 56 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-149 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-125b View Gene Set 3.479e-12 1969 1.412e-10 57 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-125b from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-125b View Gene Set 4.028e-12 1849 1.607e-10 58 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-125b from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-328 View Gene Set 4.976e-12 1458 1.952e-10 59 microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-328 from miRNAtargetUnion www.mirbase.org...
Null miranda.tarbase.targetscan.targetsUnion.hsa-miR-24 View Gene Set 5.621e-12 1760 2.168e-10 60 microRNA targets for miranda.tarbase.targetscan.targetsUnion.hsa-miR-24 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-125b View Gene Set 5.739e-12 2046 2.177e-10 61 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-125b from miRNAtargetUnion www.mirbase.org...
Null miranda.pictar.targetscan.targetsUnion.hsa-miR-149 View Gene Set 8.946e-12 1859 3.339e-10 62 microRNA targets for miranda.pictar.targetscan.targetsUnion.hsa-miR-149 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-328 View Gene Set 1.095e-11 1394 4.022e-10 63 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-328 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-886-5p View Gene Set 1.578e-11 1187 5.705e-10 64 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-886-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-149 View Gene Set 1.995e-11 1883 7.101e-10 65 microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-149 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-214 View Gene Set 2.238e-11 2832 7.845e-10 66 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-214 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-504 View Gene Set 2.475e-11 1489 8.547e-10 67 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-504 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-146b-3p View Gene Set 4.226e-11 1606 1.438e-09 68 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-146b-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.tarbase.targetsUnion.hsa-miR-24 View Gene Set 5.021e-11 1680 1.684e-09 69 microRNA targets for miranda.mirtarget2.tarbase.targetsUnion.hsa-miR-24 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-612 View Gene Set 5.879e-11 2970 1.943e-09 70 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-612 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-671-5p View Gene Set 6.731e-11 2249 2.194e-09 71 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-671-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-324-3p View Gene Set 9.381e-11 1505 3.015e-09 72 microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-324-3p from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-24 View Gene Set 1.04e-10 1220 3.296e-09 73 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-24 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-323-5p View Gene Set 1.084e-10 1485 3.389e-09 74 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-323-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-920 View Gene Set 1.154e-10 1935 3.562e-09 75 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-920 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-214 View Gene Set 1.214e-10 1354 3.696e-09 76 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-214 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-485-5p View Gene Set 1.36e-10 2302 4.034e-09 77 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-485-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.pictar.targetscan.targetsUnion.hsa-miR-24 View Gene Set 1.344e-10 1840 4.034e-09 77 microRNA targets for miranda.pictar.targetscan.targetsUnion.hsa-miR-24 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-504 View Gene Set 1.913e-10 1464 5.604e-09 79 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-504 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-631 View Gene Set 2.047e-10 1374 5.922e-09 80 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-631 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-615-3p View Gene Set 2.706e-10 1113 7.696e-09 81 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-615-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-615-3p View Gene Set 2.727e-10 1112 7.696e-09 81 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-615-3p from miRNAtargetUnion www.mirbase.org...
Null mirbase.tarbase.targetscan.targetsUnion.hsa-miR-24 View Gene Set 4.533e-10 1108 1.264e-08 83 microRNA targets for mirbase.tarbase.targetscan.targetsUnion.hsa-miR-24 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-214 View Gene Set 5.414e-10 2823 1.475e-08 84 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-214 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-675 View Gene Set 5.417e-10 1108 1.475e-08 84 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-675 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-339-5p View Gene Set 6.356e-10 1458 1.71e-08 86 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-339-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-24 View Gene Set 6.439e-10 1812 1.713e-08 87 microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-24 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-492 View Gene Set 6.873e-10 1377 1.807e-08 88 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-492 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-485-5p View Gene Set 7.81e-10 2231 2.031e-08 89 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-485-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-491-5p View Gene Set 8.863e-10 1882 2.279e-08 90 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-491-5p from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-504 View Gene Set 1.016e-09 834 2.583e-08 91 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-504 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-615-3p View Gene Set 1.113e-09 764 2.8e-08 92 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-615-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.pictar.tarbase.targetsUnion.hsa-miR-24 View Gene Set 1.128e-09 1711 2.807e-08 93 microRNA targets for miranda.pictar.tarbase.targetsUnion.hsa-miR-24 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-874 View Gene Set 1.171e-09 1362 2.884e-08 94 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-874 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-149 View Gene Set 1.276e-09 975 3.109e-08 95 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-149 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-296-3p View Gene Set 1.424e-09 1767 3.433e-08 96 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-296-3p from miRNAtargetUnion www.mirbase.org...
Null mirbase.pictar.targetscan.targetsUnion.hsa-miR-24 View Gene Set 1.525e-09 1215 3.639e-08 97 microRNA targets for mirbase.pictar.targetscan.targetsUnion.hsa-miR-24 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-342-5p View Gene Set 1.683e-09 1470 3.973e-08 98 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-342-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-769-5p View Gene Set 1.751e-09 1676 4.093e-08 99 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-769-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-491-5p View Gene Set 2.032e-09 1937 4.655e-08 100 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-491-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-532-3p View Gene Set 2.02e-09 1959 4.655e-08 100 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-532-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-483-3p View Gene Set 2.529e-09 1648 5.737e-08 102 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-483-3p from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-339-5p View Gene Set 3.045e-09 954 6.84e-08 103 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-339-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-151-5p View Gene Set 5.053e-09 1244 1.124e-07 104 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-151-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-485-5p View Gene Set 6.179e-09 2002 1.362e-07 105 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-485-5p from miRNAtargetUnion www.mirbase.org...
Null mirbase.pictar.targetscan.targetsUnion.hsa-miR-149 View Gene Set 8.482e-09 940 1.852e-07 106 microRNA targets for mirbase.pictar.targetscan.targetsUnion.hsa-miR-149 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-339-3p View Gene Set 2.041e-08 1044 4.414e-07 107 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-339-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-125b View Gene Set 2.149e-08 1428 4.605e-07 108 microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-125b from miRNAtargetUnion www.mirbase.org...
Null mirbase.pictar.targetscan.targetsUnion.hsa-miR-214 View Gene Set 2.178e-08 1420 4.623e-07 109 microRNA targets for mirbase.pictar.targetscan.targetsUnion.hsa-miR-214 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-125b View Gene Set 3.469e-08 1512 7.297e-07 110 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-125b from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-766 View Gene Set 3.877e-08 2106 8.083e-07 111 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-766 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-296-3p View Gene Set 3.96e-08 1042 8.181e-07 112 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-296-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-214 View Gene Set 4.47e-08 2872 9.153e-07 113 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-214 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-125a-5p View Gene Set 4.983e-08 2173 1.011e-06 114 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-125a-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-623 View Gene Set 6.164e-08 1834 1.24e-06 115 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-623 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-370 View Gene Set 8.9e-08 2143 1.775e-06 116 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-370 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-596 View Gene Set 1.028e-07 1484 2.034e-06 117 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-596 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-572 View Gene Set 1.176e-07 825 2.306e-06 118 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-572 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-24 View Gene Set 1.345e-07 1137 2.615e-06 119 microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-24 from miRNAtargetUnion www.mirbase.org...
Null miranda.pictar.targetscan.targetsUnion.hsa-miR-125b View Gene Set 2.217e-07 1547 4.274e-06 120 microRNA targets for miranda.pictar.targetscan.targetsUnion.hsa-miR-125b from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-874 View Gene Set 2.244e-07 975 4.292e-06 121 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-874 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-324-5p View Gene Set 2.343e-07 886 4.443e-06 122 microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-324-5p from miRNAtargetUnion www.mirbase.org...
Null mirbase.pictar.tarbase.targetsUnion.hsa-miR-24 View Gene Set 2.524e-07 989 4.749e-06 123 microRNA targets for mirbase.pictar.tarbase.targetsUnion.hsa-miR-24 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-885-3p View Gene Set 2.897e-07 1618 5.406e-06 124 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-885-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-125a-5p View Gene Set 2.924e-07 1986 5.413e-06 125 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-125a-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-769-3p View Gene Set 3.072e-07 1837 5.641e-06 126 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-769-3p from miRNAtargetUnion www.mirbase.org...
Null mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-326 View Gene Set 3.825e-07 652 6.969e-06 127 microRNA targets for mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-326 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-346 View Gene Set 4.364e-07 1502 7.889e-06 128 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-346 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-125b View Gene Set 5.687e-07 1376 1.02e-05 129 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-125b from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-504 View Gene Set 5.956e-07 1067 1.06e-05 130 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-504 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-370 View Gene Set 6.856e-07 2126 1.211e-05 131 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-370 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-491-5p View Gene Set 9.528e-07 1429 1.67e-05 132 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-491-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-198 View Gene Set 9.769e-07 2133 1.7e-05 133 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-198 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-214 View Gene Set 1.014e-06 1389 1.751e-05 134 microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-214 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-125b View Gene Set 1.048e-06 1252 1.796e-05 135 microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-125b from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-346 View Gene Set 1.332e-06 1493 2.267e-05 136 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-346 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.tarbase.targetsUnion.hsa-miR-24 View Gene Set 1.382e-06 938 2.334e-05 137 microRNA targets for mirbase.mirtarget2.tarbase.targetsUnion.hsa-miR-24 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-346 View Gene Set 1.55e-06 1521 2.599e-05 138 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-346 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-214 View Gene Set 1.573e-06 2461 2.601e-05 139 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-214 from miRNAtargetUnion www.mirbase.org...
Null mirbase.pictar.targetscan.targetsUnion.hsa-miR-125b View Gene Set 1.573e-06 1421 2.601e-05 139 microRNA targets for mirbase.pictar.targetscan.targetsUnion.hsa-miR-125b from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-149 View Gene Set 1.69e-06 935 2.774e-05 141 microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-149 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-658 View Gene Set 1.957e-06 1603 3.167e-05 142 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-658 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-324-3p View Gene Set 1.948e-06 1096 3.167e-05 142 microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-324-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-502-5p View Gene Set 1.985e-06 1725 3.19e-05 144 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-502-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-638 View Gene Set 2.138e-06 1054 3.411e-05 145 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-638 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-324-5p View Gene Set 2.542e-06 934 4.029e-05 146 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-324-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-483-5p View Gene Set 2.726e-06 1342 4.291e-05 147 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-483-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-198 View Gene Set 2.836e-06 2056 4.434e-05 148 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-198 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-650 View Gene Set 3.525e-06 2314 5.474e-05 149 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-650 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-324-5p View Gene Set 3.6e-06 1516 5.554e-05 150 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-324-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-324-5p View Gene Set 3.821e-06 1488 5.856e-05 151 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-324-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-564 View Gene Set 4.061e-06 1071 6.182e-05 152 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-564 from miRNAtargetUnion www.mirbase.org...
Null mirbase.pictar.targetscan.targetsUnion.hsa-miR-324-5p View Gene Set 4.694e-06 892 7.099e-05 153 microRNA targets for mirbase.pictar.targetscan.targetsUnion.hsa-miR-324-5p from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-491-5p View Gene Set 5.244e-06 954 7.88e-05 154 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-491-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-432 View Gene Set 5.661e-06 2471 8.452e-05 155 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-432 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-324-5p View Gene Set 7.066e-06 1517 0.0001048 156 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-324-5p from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-485-5p View Gene Set 9.51e-06 969 0.0001402 157 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-485-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-611 View Gene Set 9.971e-06 1017 0.000146 158 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-611 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-34a View Gene Set 1.164e-05 2362 0.0001693 159 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-34a from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-642 View Gene Set 1.262e-05 2012 0.0001825 160 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-642 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.tarbase.targetsUnion.hsa-miR-34a View Gene Set 1.312e-05 2284 0.0001886 161 microRNA targets for miranda.mirbase.tarbase.targetsUnion.hsa-miR-34a from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-193a-5p View Gene Set 1.418e-05 1799 0.0002026 162 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-193a-5p from miRNAtargetUnion www.mirbase.org...
Null mirtarget2.tarbase.targetscan.targetsUnion.hsa-miR-24 View Gene Set 1.465e-05 574 0.0002079 163 microRNA targets for mirtarget2.tarbase.targetscan.targetsUnion.hsa-miR-24 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-644 View Gene Set 1.665e-05 1509 0.0002349 164 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-644 from miRNAtargetUnion www.mirbase.org...
Null mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-24 View Gene Set 2.252e-05 692 0.0003159 165 microRNA targets for mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-24 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-602 View Gene Set 2.565e-05 1257 0.0003575 166 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-602 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-125a-5p View Gene Set 2.999e-05 1675 0.0004156 167 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-125a-5p from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-125a-5p View Gene Set 3.44e-05 1375 0.0004738 168 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-125a-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.pictar.targetscan.targetsUnion.hsa-miR-214 View Gene Set 3.728e-05 2503 0.0005105 169 microRNA targets for miranda.pictar.targetscan.targetsUnion.hsa-miR-214 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-34a View Gene Set 3.988e-05 2412 0.0005428 170 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-34a from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-423-3p View Gene Set 7.798e-05 1053 0.001055 171 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-423-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-198 View Gene Set 8.346e-05 1678 0.001117 172 microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-198 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-370 View Gene Set 8.349e-05 1067 0.001117 172 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-370 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-220c View Gene Set 8.618e-05 2612 0.001141 174 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-220c from miRNAtargetUnion www.mirbase.org...
Null pictar.tarbase.targetscan.targetsUnion.hsa-miR-24 View Gene Set 8.631e-05 571 0.001141 174 microRNA targets for pictar.tarbase.targetscan.targetsUnion.hsa-miR-24 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-370 View Gene Set 8.728e-05 1728 0.001147 176 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-370 from miRNAtargetUnion www.mirbase.org...
Null miranda.pictar.targetscan.targetsUnion.hsa-miR-346 View Gene Set 0.0001027 1078 0.001342 177 microRNA targets for miranda.pictar.targetscan.targetsUnion.hsa-miR-346 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-647 View Gene Set 0.0001049 1863 0.001363 178 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-647 from miRNAtargetUnion www.mirbase.org...
Null miranda.pictar.targetscan.targetsUnion.hsa-miR-185 View Gene Set 0.0001079 2549 0.001395 179 microRNA targets for miranda.pictar.targetscan.targetsUnion.hsa-miR-185 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.tarbase.targetsUnion.hsa-miR-34a View Gene Set 0.00012 1743 0.001542 180 microRNA targets for miranda.mirtarget2.tarbase.targetsUnion.hsa-miR-34a from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-886-3p View Gene Set 0.0001339 1039 0.001711 181 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-886-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-138 View Gene Set 0.0001389 2213 0.001765 182 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-138 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-490-5p View Gene Set 0.0001396 1489 0.001765 182 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-490-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.pictar.tarbase.targetsUnion.hsa-miR-34a View Gene Set 0.000142 1783 0.001786 184 microRNA targets for miranda.pictar.tarbase.targetsUnion.hsa-miR-34a from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-508-5p View Gene Set 0.00015 1930 0.001855 185 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-508-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.tarbase.targetsUnion.hsa-miR-138 View Gene Set 0.0001496 2152 0.001855 185 microRNA targets for miranda.mirbase.tarbase.targetsUnion.hsa-miR-138 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-185 View Gene Set 0.0001489 2650 0.001855 185 microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-185 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-185 View Gene Set 0.0001507 2594 0.001855 185 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-185 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-28-5p View Gene Set 0.0001553 2140 0.001882 189 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-28-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-554 View Gene Set 0.0001552 1183 0.001882 189 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-554 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-34a View Gene Set 0.0001542 2449 0.001882 189 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-34a from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-185 View Gene Set 0.0001754 2893 0.002113 192 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-185 from miRNAtargetUnion www.mirbase.org...
Null mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-328 View Gene Set 0.0001773 380 0.002126 193 microRNA targets for mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-328 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-185 View Gene Set 0.0001804 2840 0.002151 194 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-185 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-138 View Gene Set 0.0001922 2339 0.00228 195 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-138 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-346 View Gene Set 0.0001993 1115 0.002352 196 microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-346 from miRNAtargetUnion www.mirbase.org...
Null mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-185 View Gene Set 0.0002077 632 0.00244 197 microRNA targets for mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-185 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-571 View Gene Set 0.0002261 1591 0.002629 198 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-571 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-923 View Gene Set 0.0002255 1070 0.002629 198 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-923 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-125a-3p View Gene Set 0.0002285 2295 0.002644 200 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-125a-3p from miRNAtargetUnion www.mirbase.org...

Gene Set Collection: hprdBatch.UP

Arguments: refPop=all, featureType=featureNames, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null IL-3 Signaling Pathway View Gene Set 0.001497 40 0.01497 1 From NetPath for IL-3 Signaling Pathway www.netpath.org...
Null IL-7 Signaling Pathway View Gene Set 0.0007509 56 0.01497 1 From NetPath for IL-7 Signaling Pathway www.netpath.org...

Gene Set Collection: hprdBatch.DOWN

Arguments: refPop=all, featu