AFA results for: miR.1vsControl.ls

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Go to: Gene Set Collection: tfbsK3Z3

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
KEGG 03030	View Gene Set	8.012e-08	36	1.715e-05	1	DNA replication	www.genome.jp/d...
KEGG 04060	View Gene Set	1.196e-05	266	0.00128	2	Cytokine-cytokine receptor interaction	www.genome.jp/d...
KEGG 04115	View Gene Set	4.851e-05	69	0.00346	3	p53 signaling pathway	www.genome.jp/d...
KEGG 03440	View Gene Set	8.656e-05	28	0.004631	4	Homologous recombination	www.genome.jp/d...
KEGG 04080	View Gene Set	0.0002024	272	0.008663	5	Neuroactive ligand-receptor interaction	www.genome.jp/d...
KEGG 04110	View Gene Set	0.0002685	128	0.009576	6	Cell cycle	www.genome.jp/d...
KEGG 00980	View Gene Set	0.000704	71	0.0195	7	Metabolism of xenobiotics by cytochrome P450	www.genome.jp/d...
KEGG 03430	View Gene Set	0.0007291	23	0.0195	7	Mismatch repair	www.genome.jp/d...
KEGG 04512	View Gene Set	0.0008918	84	0.0212	9	ECM-receptor interaction	www.genome.jp/d...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
GO GO:0005576	View Gene Set	1.384e-14	2036	1.85e-10	1	extracellular region	amigo.geneontol...
GO GO:0050896	View Gene Set	1.023e-12	3765	6.833e-09	2	response to stimulus	amigo.geneontol...
GO GO:0032501	View Gene Set	7.842e-12	4631	2.243e-08	3	multicellular organismal process	amigo.geneontol...
GO GO:0004871	View Gene Set	8.395e-12	2128	2.243e-08	3	signal transducer activity	amigo.geneontol...
GO GO:0060089	View Gene Set	8.395e-12	2128	2.243e-08	3	molecular transducer activity	amigo.geneontol...
GO GO:0004872	View Gene Set	1.286e-10	1688	2.864e-07	6	receptor activity	amigo.geneontol...
GO GO:0023052	View Gene Set	1.645e-10	3571	3.139e-07	7	signaling	amigo.geneontol...
GO GO:0005887	View Gene Set	2.481e-10	1186	4.143e-07	8	integral to plasma membrane	amigo.geneontol...
GO GO:0044459	View Gene Set	4.583e-10	2023	6.123e-07	9	plasma membrane part	amigo.geneontol...
GO GO:0004888	View Gene Set	4.49e-10	1275	6.123e-07	9	transmembrane receptor activity	amigo.geneontol...
GO GO:0005886	View Gene Set	5.522e-10	3759	6.707e-07	11	plasma membrane	amigo.geneontol...
GO GO:0031226	View Gene Set	6.375e-10	1208	7.098e-07	12	intrinsic to plasma membrane	amigo.geneontol...
GO GO:0044421	View Gene Set	7.899e-10	1001	8.118e-07	13	extracellular region part	amigo.geneontol...
GO GO:0006950	View Gene Set	2.021e-09	1905	1.928e-06	14	response to stress	amigo.geneontol...
GO GO:0006955	View Gene Set	4.665e-09	732	4.155e-06	15	immune response	amigo.geneontol...
GO GO:0002376	View Gene Set	5.921e-09	1101	4.944e-06	16	immune system process	amigo.geneontol...
GO GO:0023060	View Gene Set	7.778e-09	2571	6.113e-06	17	signal transmission	amigo.geneontol...
GO GO:0023046	View Gene Set	9.717e-09	2577	7.212e-06	18	signaling process	amigo.geneontol...
GO GO:0005615	View Gene Set	9.063e-08	752	6.372e-05	19	extracellular space	amigo.geneontol...
GO GO:0007165	View Gene Set	1.491e-07	2232	9.96e-05	20	signal transduction	amigo.geneontol...
GO GO:0022403	View Gene Set	2.455e-07	522	0.0001562	21	cell cycle phase	amigo.geneontol...
GO GO:0007166	View Gene Set	3.206e-07	1497	0.0001947	22	cell surface receptor linked signaling pathway	amigo.geneontol...
GO GO:0006260	View Gene Set	4.495e-07	239	0.0002611	23	DNA replication	amigo.geneontol...
GO GO:0007155	View Gene Set	7.852e-07	827	0.0004196	24	cell adhesion	amigo.geneontol...
GO GO:0022610	View Gene Set	7.852e-07	828	0.0004196	24	biological adhesion	amigo.geneontol...
GO GO:0008283	View Gene Set	1.612e-06	1168	0.0008286	26	cell proliferation	amigo.geneontol...
GO GO:0006952	View Gene Set	2.039e-06	717	0.001009	27	defense response	amigo.geneontol...
GO GO:0009611	View Gene Set	2.657e-06	621	0.00119	28	response to wounding	amigo.geneontol...
GO GO:0048856	View Gene Set	2.673e-06	2763	0.00119	28	anatomical structure development	amigo.geneontol...
GO GO:0051239	View Gene Set	2.652e-06	1088	0.00119	28	regulation of multicellular organismal process	amigo.geneontol...
GO GO:0000070	View Gene Set	3.58e-06	37	0.001495	31	mitotic sister chromatid segregation	amigo.geneontol...
GO GO:0006259	View Gene Set	3.565e-06	592	0.001495	31	DNA metabolic process	amigo.geneontol...
GO GO:0048731	View Gene Set	3.916e-06	2544	0.001585	33	system development	amigo.geneontol...
GO GO:0000819	View Gene Set	5.342e-06	38	0.002099	34	sister chromatid segregation	amigo.geneontol...
GO GO:0007186	View Gene Set	8.407e-06	543	0.003209	35	G-protein coupled receptor protein signaling pathway	amigo.geneontol...
GO GO:0042127	View Gene Set	9.249e-06	852	0.003432	36	regulation of cell proliferation	amigo.geneontol...
GO GO:0023033	View Gene Set	9.566e-06	2547	0.003454	37	signaling pathway	amigo.geneontol...
GO GO:0000279	View Gene Set	1.504e-05	406	0.005153	38	M phase	amigo.geneontol...
GO GO:0032502	View Gene Set	1.496e-05	3351	0.005153	38	developmental process	amigo.geneontol...
GO GO:0022836	View Gene Set	1.779e-05	309	0.005942	40	gated channel activity	amigo.geneontol...
GO GO:0034702	View Gene Set	1.887e-05	210	0.006001	41	ion channel complex	amigo.geneontol...
GO GO:0030246	View Gene Set	1.864e-05	367	0.006001	41	carbohydrate binding	amigo.geneontol...
GO GO:0045137	View Gene Set	2.405e-05	147	0.007472	43	development of primary sexual characteristics	amigo.geneontol...
GO GO:0007275	View Gene Set	2.647e-05	3067	0.008036	44	multicellular organismal development	amigo.geneontol...
GO GO:0031012	View Gene Set	2.784e-05	371	0.008266	45	extracellular matrix	amigo.geneontol...
GO GO:0005657	View Gene Set	3.117e-05	34	0.009052	46	replication fork	amigo.geneontol...
GO GO:0000075	View Gene Set	3.477e-05	109	0.009884	47	cell cycle checkpoint	amigo.geneontol...
GO GO:0042060	View Gene Set	3.797e-05	223	0.01057	48	wound healing	amigo.geneontol...
GO GO:0005102	View Gene Set	4.499e-05	928	0.01227	49	receptor binding	amigo.geneontol...
GO GO:0003008	View Gene Set	4.903e-05	1632	0.0131	50	system process	amigo.geneontol...
GO GO:0006974	View Gene Set	5.365e-05	412	0.01405	51	response to DNA damage stimulus	amigo.geneontol...
GO GO:0007059	View Gene Set	6.62e-05	94	0.01609	52	chromosome segregation	amigo.geneontol...
GO GO:0022402	View Gene Set	6.55e-05	676	0.01609	52	cell cycle process	amigo.geneontol...
GO GO:0001871	View Gene Set	6.626e-05	166	0.01609	52	pattern binding	amigo.geneontol...
GO GO:0030247	View Gene Set	6.626e-05	166	0.01609	52	polysaccharide binding	amigo.geneontol...
GO GO:0007610	View Gene Set	8.305e-05	492	0.01981	56	behavior	amigo.geneontol...
GO GO:0007093	View Gene Set	8.463e-05	52	0.01983	57	mitotic cell cycle checkpoint	amigo.geneontol...
GO GO:0048583	View Gene Set	9.318e-05	545	0.02146	58	regulation of response to stimulus	amigo.geneontol...
GO GO:0034703	View Gene Set	9.707e-05	136	0.02198	59	cation channel complex	amigo.geneontol...
GO GO:0000793	View Gene Set	9.883e-05	136	0.02201	60	condensed chromosome	amigo.geneontol...
GO GO:0015672	View Gene Set	0.0001146	306	0.02509	61	monovalent inorganic cation transport	amigo.geneontol...
GO GO:0000280	View Gene Set	0.0001252	276	0.02585	62	nuclear division	amigo.geneontol...
GO GO:0007067	View Gene Set	0.0001252	276	0.02585	62	mitosis	amigo.geneontol...
GO GO:0042493	View Gene Set	0.0001206	262	0.02585	62	response to drug	amigo.geneontol...
GO GO:0022843	View Gene Set	0.0001258	143	0.02585	62	voltage-gated cation channel activity	amigo.geneontol...
GO GO:0007267	View Gene Set	0.000132	720	0.02672	66	cell-cell signaling	amigo.geneontol...
GO GO:0006261	View Gene Set	0.0001372	74	0.02737	67	DNA-dependent DNA replication	amigo.geneontol...
GO GO:0000087	View Gene Set	0.000147	286	0.02873	68	M phase of mitotic cell cycle	amigo.geneontol...
GO GO:0007399	View Gene Set	0.0001505	1174	0.02873	68	nervous system development	amigo.geneontol...
GO GO:0043073	View Gene Set	0.0001489	17	0.02873	68	germ cell nucleus	amigo.geneontol...
GO GO:0006297	View Gene Set	0.0001713	17	0.03193	71	nucleotide-excision repair DNA gap filling	amigo.geneontol...
GO GO:0031224	View Gene Set	0.0001739	5387	0.03193	71	intrinsic to membrane	amigo.geneontol...
GO GO:0005216	View Gene Set	0.0001745	382	0.03193	71	ion channel activity	amigo.geneontol...
GO GO:0048608	View Gene Set	0.0001888	170	0.03409	74	reproductive structure development	amigo.geneontol...
GO GO:0008406	View Gene Set	0.0001977	130	0.03475	75	gonad development	amigo.geneontol...
GO GO:0016712	View Gene Set	0.0001962	26	0.03475	75	oxidoreductase activity acting on paired donors with incorporation or reduction of molecular oxygen reduced flavin or flavoprotein as one donor and incorporation of one atom of oxygen	amigo.geneontol...
GO GO:0051301	View Gene Set	0.0002255	358	0.03913	77	cell division	amigo.geneontol...
GO GO:0008083	View Gene Set	0.0002383	161	0.04083	78	growth factor activity	amigo.geneontol...
GO GO:0007417	View Gene Set	0.0002449	463	0.04141	79	central nervous system development	amigo.geneontol...
GO GO:0007049	View Gene Set	0.000268	1006	0.04476	80	cell cycle	amigo.geneontol...
GO GO:0015075	View Gene Set	0.0002781	715	0.04586	81	ion transmembrane transporter activity	amigo.geneontol...
GO GO:0005539	View Gene Set	0.0002855	151	0.04652	82	glycosaminoglycan binding	amigo.geneontol...
GO GO:0022616	View Gene Set	0.0002983	8	0.04744	83	DNA strand elongation	amigo.geneontol...
GO GO:0031570	View Gene Set	0.000296	63	0.04744	83	DNA integrity checkpoint	amigo.geneontol...
GO GO:0004930	View Gene Set	0.0003111	855	0.0489	85	G-protein coupled receptor activity	amigo.geneontol...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Broad chr6q14	View Gene Set	0.0001486	42	0.04845	1	Genes in cytogenetic band chr6q14	www.broad.mit.e...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Broad KOBAYASHI_EGFR_SIGNALING_24HR_DN	View Gene Set	4.668e-22	243	1.117e-18	1	Genes down-regulated in H1975 cells (non-small cell lung cancer NSCLC) resistant to gefitinib [PubChem=123631] after treatment with EGFR inhibitor CL-387785 [PubChem=2776] for 24h.	www.broad.mit.e...
Broad ROSTY_CERVICAL_CANCER_PROLIFERATION_CLUSTER	View Gene Set	5.278e-19	138	6.312e-16	2	The 'Cervical Cancer Proliferation Cluster' (CCPC): genes whose expression in cervical carcinoma positively correlates with that of the HPV E6 and E7 oncogenes; they are also differentially expressed according to disease outcome.	www.broad.mit.e...
Broad BLUM_RESPONSE_TO_SALIRASIB_DN	View Gene Set	1.684e-17	332	1.343e-14	3	Selected genes down-regulated in response to the Ras inhibitor salirasib [PubChem=5469318] in a panel of cancer cell lines with constantly active HRAS [Gene ID=3265].	www.broad.mit.e...
Broad LIU_PROSTATE_CANCER_DN	View Gene Set	4.999e-15	446	2.99e-12	4	Genes down-regulated in prostate cancer samples.	www.broad.mit.e...
Broad SCHUETZ_BREAST_CANCER_DUCTAL_INVASIVE_UP	View Gene Set	8.974e-15	339	4.293e-12	5	Genes up-regulated in invasive ductal carcinoma (IDC) relative to ductal carcinoma in situ (DCIS non-invasive).	www.broad.mit.e...
Broad BENPORATH_SUZ12_TARGETS	View Gene Set	5.362e-14	1011	2.137e-11	6	Set 'Suz12 targets': genes identified by ChIP on chip as targets of the Polycomb protein SUZ12 [Gene ID=23512] in human embryonic stem cells.	www.broad.mit.e...
Broad SMID_BREAST_CANCER_LUMINAL_B_DN	View Gene Set	1.078e-13	549	3.683e-11	7	Genes down-regulated in the luminal B subtype of breast cancer.	www.broad.mit.e...
Broad BROWNE_INTERFERON_RESPONSIVE_GENES	View Gene Set	9.107e-13	67	2.723e-10	8	Genes up-regulated in primary fibroblast culture after treatment with interferon alpha for 6 h.	www.broad.mit.e...
Broad KANG_DOXORUBICIN_RESISTANCE_UP	View Gene Set	1.258e-12	53	3.343e-10	9	Genes differentialy expressed in gastric cancer cell lines: doxorubicin [PubChem=31703] resistant vs sensitive.	www.broad.mit.e...
Broad BENPORATH_ES_WITH_H3K27ME3	View Gene Set	5.388e-12	1094	1.289e-09	10	Set 'H3K27 bound': genes posessing the trimethylated H3K27 (H3K27me3) mark in their promoters in human embryonic stem cells as identified by ChIP on chip.	www.broad.mit.e...
Broad WALLACE_PROSTATE_CANCER_RACE_UP	View Gene Set	8.255e-12	288	1.795e-09	11	Genes up-regulated in prostate cancer samples from African-American patients compared to those from the European-American patients.	www.broad.mit.e...
Broad CROONQUIST_IL6_DEPRIVATION_DN	View Gene Set	3.613e-11	80	7.202e-09	12	Genes down-regulated in the ANBL-6 cell line (multiple myeloma MM) after withdrawal of IL6 [Gene ID=3569].	www.broad.mit.e...
Broad SMID_BREAST_CANCER_NORMAL_LIKE_UP	View Gene Set	6.161e-11	459	1.134e-08	13	Genes up-regulated in the normal-like subtype of breast cancer.	www.broad.mit.e...
Broad CHARAFE_BREAST_CANCER_LUMINAL_VS_MESENCHYMAL_DN	View Gene Set	8.632e-11	444	1.475e-08	14	Genes down-regulated in luminal-like breast cancer cell lines compared to the mesenchymal-like ones.	www.broad.mit.e...
Broad SMID_BREAST_CANCER_BASAL_UP	View Gene Set	1.492e-10	629	2.38e-08	15	Genes up-regulated in basal subtype of breast cancer samles.	www.broad.mit.e...
Broad CROONQUIST_NRAS_SIGNALING_DN	View Gene Set	2.355e-10	62	3.521e-08	16	Genes down-regulated in ANBL-6 cell line (multiple myeloma MM) expressing a constantly active form of NRAS [Gene ID=4893] off a plasmid vector compared to those grown in the presence of IL6 [Gene ID=3569].	www.broad.mit.e...
Broad POOLA_INVASIVE_BREAST_CANCER_UP	View Gene Set	5.062e-10	278	7.123e-08	17	Genes up-regulated in atypical ductal hyperplastic tissues from patients with (ADHC) breast cancer vs those without the cancer (ADH).	www.broad.mit.e...
Broad MARKEY_RB1_ACUTE_LOF_DN	View Gene Set	6.269e-10	201	8.33e-08	18	Genes down-regulated in adult fibroblasts with inactivated RB1 [Gene ID=5925] by Cre-lox: acute loss of function (LOF) of RB1.	www.broad.mit.e...
Broad ALCALAY_AML_BY_NPM1_LOCALIZATION_DN	View Gene Set	7.684e-10	179	9.673e-08	19	Genes changed in acute myeloid leukemia (AML) with respect to cellular localization of NPM1 [Gene ID=4869]: cytoplasmic vs. nucleolar.	www.broad.mit.e...
Broad SENGUPTA_NASOPHARYNGEAL_CARCINOMA_UP	View Gene Set	9.66e-10	269	1.129e-07	20	Genes up-regulated in nsopharyngeal carcinoma relative to the normal tissue.	www.broad.mit.e...
Broad HOFFMANN_LARGE_TO_SMALL_PRE_BII_LYMPHOCYTE_UP	View Gene Set	1.03e-09	93	1.129e-07	20	Genes up-regulated during differentiation from large pre-BII to small pre-BII lymphocyte.	www.broad.mit.e...
Broad NAKAYAMA_SOFT_TISSUE_TUMORS_PCA2_UP	View Gene Set	1.038e-09	87	1.129e-07	20	Top 100 probe sets contrubuting to the positive side of the 2nd principal component; associated with adipocytic differentiation.	www.broad.mit.e...
Broad GOZGIT_ESR1_TARGETS_DN	View Gene Set	1.093e-09	710	1.137e-07	23	Genes down-regulated in TMX2-28 cells (breast cancer) which do not express ESR1 [Gene ID=2099]) compared to the parental MCF7 cells which do.	www.broad.mit.e...
Broad GRAHAM_NORMAL_QUIESCENT_VS_NORMAL_DIVIDING_DN	View Gene Set	1.909e-09	86	1.903e-07	24	Genes down-regulated in quiescent vs dividing CD34+ [Gene ID=8842] cells isolated from peripheral blood of normal donors.	www.broad.mit.e...
Broad BENPORATH_EED_TARGETS	View Gene Set	3.412e-09	1033	3.264e-07	25	Set 'Eed targets': genes identified by ChIP on chip as targets of the Polycomb protein EED [Gene ID=8726] in human embryonic stem cells.	www.broad.mit.e...
Broad ODONNELL_TFRC_TARGETS_UP	View Gene Set	4.424e-09	401	4.022e-07	26	Genes up-regulated in P493-6 cells (B lymphocyte) upon knockdown of TFRC [Gene ID=7037] by RNAi.	www.broad.mit.e...
Broad LINDGREN_BLADDER_CANCER_CLUSTER_2B	View Gene Set	4.54e-09	384	4.022e-07	26	Genes specifically up-regulated in Cluster IIb of urothelial cell carcinom (UCC) tumors.	www.broad.mit.e...
Broad DAVICIONI_TARGETS_OF_PAX_FOXO1_FUSIONS_UP	View Gene Set	6.371e-09	247	5.442e-07	28	Genes up-regulated in RD cells (embryonal rhabdomyosarcoma ERMS) by expression of PAX3- or PAX7-FOXO1 [Gene ID=5077 5081 2308] fusions off retroviral vectors.	www.broad.mit.e...
Broad RIGGI_EWING_SARCOMA_PROGENITOR_DN	View Gene Set	6.771e-09	178	5.585e-07	29	Genes down-regulated in mesenchymal stem cells (MSC) engineered to express EWS-FLI1 [Gene ID=2130 2321] fusion protein.	www.broad.mit.e...
Broad VECCHI_GASTRIC_CANCER_EARLY_DN	View Gene Set	8.144e-09	346	6.494e-07	30	Down-regulated genes distinguishing between early gastric cancer (EGC) and normal tissue samples.	www.broad.mit.e...
Broad VERNELL_RETINOBLASTOMA_PATHWAY_UP	View Gene Set	9.967e-09	39	7.691e-07	31	Cluster 1: genes up-regulated by RB1 [Gene ID=5925] CDNK2A [Gene ID=1029] and one of the E2Fs (E2F1 E2F2 or E2F3 [Gene ID=1869 1870 1871]).	www.broad.mit.e...
Broad FULCHER_INFLAMMATORY_RESPONSE_LECTIN_VS_LPS_DN	View Gene Set	1.166e-08	431	8.717e-07	32	Genes down-regulated in monocyte-derived dendritic cells (MDDC) after stimulation with galecin-1 (lectin LGALS1) [Gene ID=3956] compared to that with bacterial lipopolysaccharide (LPS).	www.broad.mit.e...
Broad RUIZ_TNC_TARGETS_DN	View Gene Set	1.292e-08	138	9.367e-07	33	Genes down-regulated in T98G cells (glioblastoma) by TNC [Gene ID=3371].	www.broad.mit.e...
Broad CHIANG_LIVER_CANCER_SUBCLASS_PROLIFERATION_UP	View Gene Set	1.399e-08	135	9.845e-07	34	Top 200 marker genes up-regulated in the 'proliferation' subclass of hepatocellular carcinoma (HCC); characterized by increased proliferation high levels of serum AFP [Gene ID=174] and chromosomal instability.	www.broad.mit.e...
Broad PYEON_HPV_POSITIVE_TUMORS_UP	View Gene Set	1.456e-08	86	9.952e-07	35	Up-regulated genes in cervical carcinoma and head and neck tumors positive for human papilloma virus (HPV) compared to those negative for HPV.	www.broad.mit.e...
Broad BENPORATH_CYCLING_GENES	View Gene Set	1.958e-08	630	1.301e-06	36	Genes showing cell-cycle stage-specific expression [PMID=12058064].	www.broad.mit.e...
Broad LEE_EARLY_T_LYMPHOCYTE_UP	View Gene Set	2.048e-08	80	1.324e-06	37	Genes up-regulated at early stages of progenitor T lymphocyte maturation compared to the late stages.	www.broad.mit.e...
Broad SOTIRIOU_BREAST_CANCER_GRADE_1_VS_3_UP	View Gene Set	2.684e-08	143	1.689e-06	38	Up-regulated genes whose expression correlated with histologic grade of invasive breast cancer tumors: comparison of grade 1 vs grade 3.	www.broad.mit.e...
Broad GOLDRATH_ANTIGEN_RESPONSE	View Gene Set	3.726e-08	315	2.285e-06	39	Genes up-regulated at the peak of an antigen response of naive CD8+ [Gene ID=925 926] T-cells.	www.broad.mit.e...
Broad ODONNELL_TFRC_TARGETS_DN	View Gene Set	4.053e-08	131	2.424e-06	40	Genes dpwn-regulated in P493-6 cells (B lymphocyte) upon knockdown of TFRC [Gene ID=7037] by RNAi.	www.broad.mit.e...
Broad CHANG_CYCLING_GENES	View Gene Set	4.604e-08	49	2.686e-06	41	Fibroblast serum response genes showing periodic expression during the cell cycle; excluded from the core serum response signature.	www.broad.mit.e...
Broad TAKEDA_TARGETS_OF_NUP98_HOXA9_FUSION_3D_UP	View Gene Set	5.57e-08	174	3.172e-06	42	Genes up-regulated in CD34+ [Gene ID=947] hematopoetic cells by expression of NUP98-HOXA9 fusion [Gene ID=4928 3205] off a retroviral vector at 3 days after transduction.	www.broad.mit.e...
Broad SEITZ_NEOPLASTIC_TRANSFORMATION_BY_8P_DELETION_UP	View Gene Set	6.51e-08	72	3.592e-06	43	Genes up-regulated in CT60/4 cells (breast cancer reverted to normal by transfer of chromosome 8p region) vs parental MDA-MB-231 cells (deleted chromosome 8p).	www.broad.mit.e...
Broad BENPORATH_PRC2_TARGETS	View Gene Set	6.742e-08	636	3.592e-06	43	Set 'PRC2 targets': Polycomb Repression Complex 2 (PRC) targets; identified by ChIP on chip on human embryonic stem cells as genes that: posess the trimethylated H3K27 mark in their promoters and are bound by SUZ12 [Gene ID=23512] and EED [Gene ID=8726] Polycomb proteins.	www.broad.mit.e...
Broad FRASOR_RESPONSE_TO_SERM_OR_FULVESTRANT_DN	View Gene Set	6.757e-08	43	3.592e-06	43	Genes down-regulated in MCF-7 cells (breast cancer) by selective estrogen receptor modulators (SERM) 4-hydroxytamoxifen raloxifene or ICI 182780 but not by estradiol [PubChem=44959 5035 3478439 5757].	www.broad.mit.e...
Broad DELYS_THYROID_CANCER_UP	View Gene Set	7.002e-08	397	3.641e-06	46	Genes up-regulated in papillary thyroid carcinoma (PTC) compared to normal tissue.	www.broad.mit.e...
Broad EINAV_INTERFERON_SIGNATURE_IN_CANCER	View Gene Set	8.777e-08	27	4.374e-06	47	A gene expression signature found in a subset of cancer patients suggestive of a deregulated immune or inflammatory response.	www.broad.mit.e...
Broad CAIRO_HEPATOBLASTOMA_CLASSES_DN	View Gene Set	8.683e-08	205	4.374e-06	47	Genes down-regulated in robust Cluster 2 (rC2) of hepatoblastoma samples compared to those in the robust Cluster 1 (rC1).	www.broad.mit.e...
Broad GRAHAM_CML_DIVIDING_VS_NORMAL_QUIESCENT_UP	View Gene Set	9.168e-08	180	4.386e-06	49	Genes up-regulated in quiescent CD34+ [Gene ID=8842] cells isolated from peripheral blood of normal donors compared to the dividing cells from CML (chronic myeloid leukemia) patients.	www.broad.mit.e...
Broad LE_EGR2_TARGETS_UP	View Gene Set	9e-08	100	4.386e-06	49	Genes up-regulated in P14 nerves of transgenic mice having hypomorhic (reduced function) allele of EGR2 [Gene ID=1959].	www.broad.mit.e...
Broad WHITEFORD_PEDIATRIC_CANCER_MARKERS	View Gene Set	9.965e-08	92	4.674e-06	51	Differentially expressed genes in a panel of xenografts representing 8 common pediatric tumors compared to the normal tissues.	www.broad.mit.e...
Broad SATO_SILENCED_BY_METHYLATION_IN_PANCREATIC_CANCER_1	View Gene Set	1.101e-07	407	5.067e-06	52	Genes up-regulated in the pancreatic cancer cell lines (AsPC1 Hs766T MiaPaCa2 Panc1) but not in the non-neoplastic cells (HPDE) by decitabine (5-aza-2'-deoxycytidine) [PubChem=451668].	www.broad.mit.e...
Broad BASSO_HAIRY_CELL_LEUKEMIA_DN	View Gene Set	1.752e-07	78	7.909e-06	53	Genes down-regulated in hairy cell leukemia (HCL) compared with normal and other neoplastic B cell populations.	www.broad.mit.e...
Broad MOSERLE_IFNA_RESPONSE	View Gene Set	1.861e-07	30	8.243e-06	54	Top 50 genes up-regulated in ovarian cancer progenitor cells (also known as side population SP cells) in response to interferon alpha (IFNA).	www.broad.mit.e...
Broad SONG_TARGETS_OF_IE86_CMV_PROTEIN	View Gene Set	1.904e-07	49	8.283e-06	55	Cellular genes up-regulated in forskin fibroblasts by expression of CMV EI86 protein off an adenovirus vector.	www.broad.mit.e...
Broad JAEGER_METASTASIS_DN	View Gene Set	3.468e-07	252	1.481e-05	56	Genes down-regulated in metastases from malignant melanoma compared to the primary tumors.	www.broad.mit.e...
Broad PUJANA_XPRSS_INT_NETWORK	View Gene Set	3.801e-07	164	1.595e-05	57	Genes constituting the XPRSS-Int network: intersection of genes whose expression correlates with BRCA1 BRCA2 ATM and CHEK2 [Gene ID=672 675 472 11200] in a compendium of normal tissues.	www.broad.mit.e...
Broad DELYS_THYROID_CANCER_DN	View Gene Set	4.414e-07	213	1.82e-05	58	Genes down-regulated in papillary thyroid carcinoma (PTC) compared to normal tissue.	www.broad.mit.e...
Broad TONKS_TARGETS_OF_RUNX1_RUNX1T1_FUSION_ERYTHROCYTE_UP	View Gene Set	6.105e-07	155	2.475e-05	59	Genes up-regulated in erythroid lineage cells by RUNX1-RUNX1T1 [Gene ID=861 862] fusion .	www.broad.mit.e...
Broad SCIAN_CELL_CYCLE_TARGETS_OF_TP53_AND_TP73_DN	View Gene Set	6.328e-07	22	2.523e-05	60	Cell cycle genes changed in H1299 cells (lung cancer) after overexpression of either P53 [Gene ID=7157] or P73 [Gene ID=7161].	www.broad.mit.e...
Broad PYEON_CANCER_HEAD_AND_NECK_VS_CERVICAL_UP	View Gene Set	7.9e-07	175	3.098e-05	61	Up-regulated genes in head and neck cancer compared to cervical carcinoma samples.	www.broad.mit.e...
Broad VART_KSHV_INFECTION_ANGIOGENIC_MARKERS_UP	View Gene Set	8.62e-07	163	3.326e-05	62	Angiogenic markers up-regulated in lymph endothelial cells upon infection with KSHV (Kaposi's sarcoma herpes virus).	www.broad.mit.e...
Broad LINDGREN_BLADDER_CANCER_CLUSTER_3_UP	View Gene Set	9.344e-07	314	3.548e-05	63	Genes whose expression profile is specific to Cluster III of urothelial cell carcinoma (UCC) tumors.	www.broad.mit.e...
Broad SMID_BREAST_CANCER_LUMINAL_A_UP	View Gene Set	9.782e-07	79	3.656e-05	64	Genes up-regulated in the luminal A subtype of breast cancer.	www.broad.mit.e...
Broad RUTELLA_RESPONSE_TO_HGF_DN	View Gene Set	1.354e-06	223	4.983e-05	65	Genes down-regulated in peripheral blood monocytes by HGF [Gene ID=3082].	www.broad.mit.e...
Broad RIGGI_EWING_SARCOMA_PROGENITOR_UP	View Gene Set	1.544e-06	399	5.596e-05	66	Genes up-regulated in mesenchymal stem cells (MSC) engineered to express EWS-FLI1 [Gene ID=2130 2321] fusion protein.	www.broad.mit.e...
Broad REN_BOUND_BY_E2F	View Gene Set	1.967e-06	47	7.023e-05	67	Genes whose promoters were bound by E2F1 [Gene ID=1869] and E2F4 [Gene ID=1874] in the primary fibroblasts WI-38 by ChIP on chip assay.	www.broad.mit.e...
Broad PEREZ_TP63_TARGETS	View Gene Set	2.375e-06	328	8.355e-05	68	Genes up-regulated in the HMEC cells (primary mammary epithelium) upon expression of the transcriptionally active isoform of TP63 [Gene ID=8626] off adenoviral vector.	www.broad.mit.e...
Broad PUJANA_BRCA2_PCC_NETWORK	View Gene Set	2.878e-06	410	9.977e-05	69	Genes constituting the BRCA2-PCC network of transcripts whose expression positively correlated (Pearson correlation coefficient PCC >= 0.4) with that of BRCA2 [Gene ID=675] across a compendium of normal tissues.	www.broad.mit.e...
Broad SANA_RESPONSE_TO_IFNG_UP	View Gene Set	3.074e-06	68	0.000105	70	Genes up-regulated in five primary endothelial cell types (lung aortic iliac dermal and colon) by IFNG [Gene ID=3458].	www.broad.mit.e...
Broad LINDGREN_BLADDER_CANCER_CLUSTER_1_DN	View Gene Set	3.309e-06	368	0.0001099	71	Genes whose expression profile is specific to Custer I of urothelial cell carcinoma (UCC) tumors.	www.broad.mit.e...
Broad RICKMAN_HEAD_AND_NECK_CANCER_E	View Gene Set	3.287e-06	83	0.0001099	71	Cluster e: genes identifying an intrinsic group in head and neck squamous cell carcinoma (HNSCC).	www.broad.mit.e...
Broad LEE_DIFFERENTIATING_T_LYMPHOCYTE	View Gene Set	3.395e-06	129	0.0001112	73	Genes enriched at every T lymphocyte differentiation stage compared to the early passage fetal thymic stromal cultures (TSC).	www.broad.mit.e...
Broad PUJANA_BREAST_CANCER_WITH_BRCA1_MUTATED_UP	View Gene Set	4.297e-06	53	0.0001389	74	The XPRSS-Int network genes up-regulated in breast tumors from patients with germline mutations in BRCA1 [Gene ID=672] compared to those with the wild type allele.	www.broad.mit.e...
Broad MISSIAGLIA_REGULATED_BY_METHYLATION_DN	View Gene Set	4.406e-06	96	0.0001405	75	Genes down-regulated in PaCa44 and CFPAC1 cells (pancreatic cancer) after treatment with decitabine [PubChem=451668] a DNA hypomethylating agent similar to azacitidine [PubChem=9444].	www.broad.mit.e...
Broad ZHAN_MULTIPLE_MYELOMA_PR_UP	View Gene Set	4.539e-06	43	0.0001428	76	Top 50 up-regulated genes in cluster PR of multiple myeloma samples characterized by increased expression of proliferation and cell cycle genes.	www.broad.mit.e...
Broad IZADPANAH_STEM_CELL_ADIPOSE_VS_BONE_DN	View Gene Set	4.639e-06	104	0.0001441	77	Genes down-regulated in adipose tissue mesenchymal stem cells (ASC) vs bone marrow mesenchymal stem cells (rBMSC)	www.broad.mit.e...
Broad CASTELLANO_NRAS_TARGETS_UP	View Gene Set	5.28e-06	59	0.0001605	78	Genes up-regulated in MEF cells (embryonic fibroblast) isolated from NRAS [Gene ID=4893] knockout mice.	www.broad.mit.e...
Broad SANA_TNF_SIGNALING_UP	View Gene Set	5.302e-06	75	0.0001605	78	Genes up-regulated in five primary endothelial cell types (lung aortic iliac dermal and colon) by TNF [Gene ID=7124].	www.broad.mit.e...
Broad CROONQUIST_NRAS_VS_STROMAL_STIMULATION_DN	View Gene Set	5.521e-06	81	0.0001651	80	Genes down-regulated in ANBL-6 cell line (multiple myeloma MM) expressing an activated form of NRAS [Gene ID=4893] off a plasmid vector compared to those co-cultured with bone marrow stromal cells.	www.broad.mit.e...
Broad MATTIOLI_MULTIPLE_MYELOMA_WITH_14Q32_TRANSLOCATIONS	View Gene Set	6.078e-06	36	0.0001755	81	Genes expressed in multiple myeloma (MM) patients carrying specific translocations involving the immunoglobulin heavy chain (IGH) locus at 14q32.	www.broad.mit.e...
Broad WIELAND_UP_BY_HBV_INFECTION	View Gene Set	6.064e-06	98	0.0001755	81	Genes induced in the liver during hepatitis B (HBV) viral clearance in chimpanzees.	www.broad.mit.e...
Broad LI_WILMS_TUMOR_VS_FETAL_KIDNEY_1_DN	View Gene Set	6.09e-06	158	0.0001755	81	Genes down-regulated in Wilm's tumor samples compared to fetal kidney.	www.broad.mit.e...
Broad MANALO_HYPOXIA_UP	View Gene Set	6.616e-06	197	0.0001884	84	Genes up-regulated in response to both hypoxia and overexpression of an active form of HIF1A [Gene ID=3091].	www.broad.mit.e...
Broad GAL_LEUKEMIC_STEM_CELL_DN	View Gene Set	7.43e-06	239	0.0002091	85	Genes down-regulated in leukemic stem cells (LSC) defined as CD34+CD38- [Gene ID=947 952] cells from AML (acute myeloid leukemia patients) compared to the CD34+CD38+ cells.	www.broad.mit.e...
Broad ONDER_CDH1_TARGETS_2_DN	View Gene Set	7.668e-06	453	0.0002133	86	Genes down-regulated in HMLE cells (immortalized nontransformed mammary epithelium) after E-cadhedrin (CDH1) [Gene ID=999] knockdown by RNAi.	www.broad.mit.e...
Broad BOYAULT_LIVER_CANCER_SUBCLASS_G23_UP	View Gene Set	8.892e-06	52	0.0002445	87	Up-regulated genes in hepatocellular carcinoma (HCC) subclass G23 defined by unsupervised clustering.	www.broad.mit.e...
Broad DOANE_RESPONSE_TO_ANDROGEN_DN	View Gene Set	9.28e-06	235	0.0002522	88	Genes down-regulated in MDA-MB-453 cells (class A ER(-) [Gene ID=2099] breast cancer) after exposure to the androgen R1881 [PubChem=13766].	www.broad.mit.e...
Broad ZHANG_INTERFERON_RESPONSE	View Gene Set	1.012e-05	21	0.000269	89	Interferon-inducible genes up-regulated in A549 cells (lung cancer) infected with a respiratory syncytial virus (RSV) that had its NS1 [Gene ID=1494468] gene knocked down by RNAi.	www.broad.mit.e...
Broad NAKAYAMA_SOFT_TISSUE_TUMORS_PCA1_UP	View Gene Set	1.007e-05	74	0.000269	89	Top 100 probe sets contrubuting to the positive side of the 1st principal component; predominantly associated with spindle cell and pleomorphic sarcoma samples.	www.broad.mit.e...
Broad SHEN_SMARCA2_TARGETS_DN	View Gene Set	1.025e-05	334	0.0002694	91	Genes whose expression negatively correlated with that of SMARCA2 [Gene ID=6595] in prostate cancer samples.	www.broad.mit.e...
Broad MORI_IMMATURE_B_LYMPHOCYTE_DN	View Gene Set	1.121e-05	52	0.0002891	92	Down-regulated genes in the B lymphocyte developmental signature based on expression profiling of lymphomas from the Emu-myc transgenic mice: the immature B stage.	www.broad.mit.e...
Broad SHEDDEN_LUNG_CANCER_POOR_SURVIVAL_A6	View Gene Set	1.124e-05	435	0.0002891	92	Cluster 6 of method A: up-regulation of these genes in patients with non???small cell lung cancer (NSCLC) predicts poor survival outcome.	www.broad.mit.e...
Broad SATO_SILENCED_BY_METHYLATION_IN_PANCREATIC_CANCER_2	View Gene Set	1.365e-05	48	0.0003472	94	50 most interesting genes up-regulated in the pancreatic cancer cell lines (AsPC1 Hs766T MiaPaCa2 Panc1) but not in the non-neoplastic cells (HPDE) by decitabine (5-aza-2'-deoxycytidine) [PubChem=451668].	www.broad.mit.e...
Broad MARKEY_RB1_CHRONIC_LOF_UP	View Gene Set	1.421e-05	111	0.0003578	95	Genes up-regulated in MEF cells (embryonic fibroblasts) isolated from RB1 [Gene ID=5925] knockout mice: chronic loss of function (LOF) of RB1.	www.broad.mit.e...
Broad PICCALUGA_ANGIOIMMUNOBLASTIC_LYMPHOMA_UP	View Gene Set	1.758e-05	197	0.0004381	96	Up-regulated genes in angioimmunoblastic lymphoma (AILT) compared to normal T lymphocytes.	www.broad.mit.e...
Broad JAEGER_METASTASIS_UP	View Gene Set	1.897e-05	44	0.000463	97	Genes up-regulated in metastases from malignant melanoma compared to the primary tumors.	www.broad.mit.e...
Broad WU_APOPTOSIS_BY_CDKN1A_VIA_TP53	View Gene Set	1.895e-05	36	0.000463	97	Genes downstream of both CDKN1A and TP53 [Gene ID=1026 7157] in 2774qw1 cells (ovarian cancer).	www.broad.mit.e...
Broad FARMER_BREAST_CANCER_CLUSTER_1	View Gene Set	1.971e-05	44	0.0004761	99	Cluster 1: interferon T and B lymphocyte genes clustered together across breast cancer samples.	www.broad.mit.e...
Broad BOYAULT_LIVER_CANCER_SUBCLASS_G5_DN	View Gene Set	2.07e-05	24	0.0004951	100	Down-regulated genes in hepatocellular carcinoma (HCC) subclass G5 defined by unsupervised clustering.	www.broad.mit.e...
Broad MORI_LARGE_PRE_BII_LYMPHOCYTE_UP	View Gene Set	2.112e-05	52	0.0005002	101	Up-regulated genes in the B lymphocyte developmental signature based on expression profiling of lymphomas from the Emu-myc transgenic mice: the Large Pre-BII stage.	www.broad.mit.e...
Broad EGUCHI_CELL_CYCLE_RB1_TARGETS	View Gene Set	2.196e-05	19	0.0005149	102	RB1 [Gene ID=5925] target genes involved in cell cycle regulation: genes down-regulated by doxorubicin [PubChem=31703] only in cells expressing RB1.	www.broad.mit.e...
Broad VECCHI_GASTRIC_CANCER_EARLY_UP	View Gene Set	2.266e-05	408	0.0005262	103	Up-regulated genes distinguishing between early gastric cancer (EGC) and normal tissue samples.	www.broad.mit.e...
Broad DAUER_STAT3_TARGETS_DN	View Gene Set	2.72e-05	37	0.0006188	104	Top 50 genes down-regulated in A549 cells (lung cancer) expressing STAT3 [Gene ID=6774] off an adenovirus vector.	www.broad.mit.e...
Broad KALMA_E2F1_TARGETS	View Gene Set	2.742e-05	11	0.0006188	104	DNA replication genes up-regulated in a Rat-1a cell line (fibroblast) by expression of E2F1 [Gene ID=1869].	www.broad.mit.e...
Broad STEIN_ESRRA_TARGETS_RESPONSIVE_TO_ESTROGEN_DN	View Gene Set	2.702e-05	41	0.0006188	104	Genes down-regulated by estradiol [PubChem=5757] and down-regulated by ESRRA [Gene ID=2101] in MCF-7 cells (breast cancer).	www.broad.mit.e...
Broad CHARAFE_BREAST_CANCER_LUMINAL_VS_BASAL_DN	View Gene Set	2.877e-05	437	0.0006346	107	Genes down-regulated in luminal-like breast cancer cell lines compared to the basal-like ones.	www.broad.mit.e...
Broad SHEPARD_BMYB_MORPHOLINO_DN	View Gene Set	2.892e-05	156	0.0006346	107	Human orthologs of genes down-regulated in zebra fish after knockdown of BMYB [Gene ID=4605] by morpholino.	www.broad.mit.e...
Broad SHEPARD_CRUSH_AND_BURN_MUTANT_DN	View Gene Set	2.882e-05	147	0.0006346	107	Human orthologs of genes down-regulated in the crb ('crash and burn') zebrafish mutant that represents a loss-of-function mutation in BMYB [Gene ID=4605].	www.broad.mit.e...
Broad MCLACHLAN_DENTAL_CARIES_DN	View Gene Set	3.015e-05	234	0.0006557	110	Genes down-regulated in pulpal tissue extracted from carious teeth.	www.broad.mit.e...
Broad MITSIADES_RESPONSE_TO_APLIDIN_DN	View Gene Set	3.072e-05	241	0.000662	111	Genes down-regulated in the MM1S cells (multiple myeloma) after treatment with aplidin [PubChem=44152164] a marine-derived compound with potential anti-cancer properties.	www.broad.mit.e...
Broad COATES_MACROPHAGE_M1_VS_M2_UP	View Gene Set	3.112e-05	70	0.0006647	112	Up-regulated genes distinguishing between M1 (pro-inflammatory) and M2 (anti-inflammatory) macrophage subtypes.	www.broad.mit.e...
Broad KAUFFMANN_MELANOMA_RELAPSE_UP	View Gene Set	3.158e-05	57	0.0006685	113	DNA repair and replication genes up-regulated in melanoma patients who will relapse vs patients who will not.	www.broad.mit.e...
Broad BERENJENO_TRANSFORMED_BY_RHOA_UP	View Gene Set	3.329e-05	485	0.0006985	114	Genes up-regulated in NIH3T3 cells (fibroblasts) transformed by expression of contitutively active (Q63L) form of RHOA [Gene ID=387] off plasmid vector.	www.broad.mit.e...
Broad VALK_AML_CLUSTER_1	View Gene Set	3.548e-05	28	0.000738	115	Top 40 genes from cluster 1 of acute myeloid leukemia (AML) expression profile; 57% of the samples are FAB M1 subtype 43% have 11q23 abnormalities and 36% have up-regulated EVI1 [Gene ID=2122] expression.	www.broad.mit.e...
Broad HOSHIDA_LIVER_CANCER_SUBCLASS_S1	View Gene Set	3.691e-05	237	0.0007611	116	Genes from 'subtype S1' signature of hepatocellular carcinoma (HCC): aberrant activation of the WNT signaling pathway.	www.broad.mit.e...
Broad KAN_RESPONSE_TO_ARSENIC_TRIOXIDE	View Gene Set	4.129e-05	117	0.0008441	117	Genes changed in U373-MG cells (malignant glioma) upon treatment with arsenic trioxide [PubChem=14888] a chemical that can cause autophagic cell death.	www.broad.mit.e...
Broad GEORGES_CELL_CYCLE_MIR192_TARGETS	View Gene Set	5.076e-05	59	0.00102	118	Experimentally validated direct targets of MIR192 [Gene ID=406967] microRNA; MIR192 caused cell cycle arrest in HCT116 cells (colon cancer).	www.broad.mit.e...
Broad SHEPARD_BMYB_TARGETS	View Gene Set	5.037e-05	60	0.00102	118	Human orthologs of BMYB [Gene ID=4605] target genes in zebra fish identified as commonly changed in the BMYB loss of function mutant crb ('crush and burn') and after knockdown of BMYB by morpholino.	www.broad.mit.e...
Broad SABATES_COLORECTAL_ADENOMA_DN	View Gene Set	5.371e-05	276	0.001071	120	Genes down-regulated in colorectal adenoma compared to normal mucosa samples.	www.broad.mit.e...
Broad SMID_BREAST_CANCER_BASAL_DN	View Gene Set	6.393e-05	664	0.001264	121	Genes down-regulated in basal subtype of breast cancer samles.	www.broad.mit.e...
Broad SLEBOS_HEAD_AND_NECK_CANCER_WITH_HPV_UP	View Gene Set	6.905e-05	72	0.001354	122	Genes up-regulated in head and neck squamous cell carcinoma (HNSCC) samples positive for HPV compared to the HPV-negative tumors.	www.broad.mit.e...
Broad HADDAD_B_LYMPHOCYTE_PROGENITOR	View Gene Set	7.18e-05	275	0.001396	123	Genes up-regulated in hematopoietic progenitor cells (HPC) of B lymphocyte lineage CD34+CD45RA+CD10+ [Gene ID=947 5788 4311].	www.broad.mit.e...
Broad BENNETT_SYSTEMIC_LUPUS_ERYTHEMATOSUS	View Gene Set	7.313e-05	23	0.001411	124	Genes significantly up-regulated in the blood mononuclear cells from patients with systemic lupus erythematosus compared to those from healthy persons.	www.broad.mit.e...
Broad BILD_E2F3_ONCOGENIC_SIGNATURE	View Gene Set	7.753e-05	222	0.001484	125	Genes selected in supervised analyses to discriminate cells expressing E2F3 [Gene ID=1871] from control cells expressing GFP.	www.broad.mit.e...
Broad BOWIE_RESPONSE_TO_TAMOXIFEN	View Gene Set	7.922e-05	14	0.001493	126	Genes up-regulated by tamoxifen [PubChem=5376] in HMEC-E6 cells (mammary epithelial cells damaged by expression of HPV-16 E6 [Gene ID=1489078]).	www.broad.mit.e...
Broad MARCHINI_TRABECTEDIN_RESISTANCE_UP	View Gene Set	7.924e-05	20	0.001493	126	Genes up-regulated in chondrosarcoma and ovarian carcinoma cell lines which developed resistance to trabectedin [PubChem=3199].	www.broad.mit.e...
Broad SWEET_LUNG_CANCER_KRAS_DN	View Gene Set	8.204e-05	397	0.001533	128	Genes down-regulated in the mouse lung cancer model with mutated KRAS [Gene ID=3845].	www.broad.mit.e...
Broad ONDER_CDH1_TARGETS_2_UP	View Gene Set	8.413e-05	249	0.00156	129	Genes up-regulated in HMLE cells (immortalized nontransformed mammary epithelium) after E-cadhedrin (CDH1) [Gene ID=999] knockdown by RNAi.	www.broad.mit.e...
Broad KORKOLA_TERATOMA	View Gene Set	9.166e-05	31	0.001687	130	Genes predicting the teratoma (T) subtype of nonseminomatous male germ cell tumors (NSGCT).	www.broad.mit.e...
Broad FUJII_YBX1_TARGETS_DN	View Gene Set	9.454e-05	139	0.001713	131	Genes down-regulated in MCF-7 cells (breast cancer) after knockdown of YBX1 [Gene ID=4904] by RNAi.	www.broad.mit.e...
Broad LIU_VAV3_PROSTATE_CARCINOGENESIS_UP	View Gene Set	9.397e-05	89	0.001713	131	Selected genes up-regulated in prostate tumors developed by transgenic mice overexpressing VAV3 [Gene ID=10451] in prostate epithelium.	www.broad.mit.e...
Broad LEE_LIVER_CANCER_DENA_UP	View Gene Set	9.95e-05	59	0.001789	133	Genes up-regulated in hepatocellular carcinoma (HCC) induced by diethylnitrosamine (DENA) [PubChem=5921].	www.broad.mit.e...
Broad DER_IFN_ALPHA_RESPONSE_UP	View Gene Set	0.0001064	57	0.001899	134	Genes up-regulated in HT1080 cells (fibrosarcoma) by treatment with interferon alpha for 6 h.	www.broad.mit.e...
Broad GEORGES_TARGETS_OF_MIR192_AND_MIR215	View Gene Set	0.0001274	809	0.002257	135	Genes down-regulated in HCT116 cells (colon cancer) by expression of MIR192 or MIR215 [Gene ID=406967 406997] at 24 h.	www.broad.mit.e...
Broad TAKEDA_TARGETS_OF_NUP98_HOXA9_FUSION_10D_UP	View Gene Set	0.0001291	186	0.002271	136	Genes up-regulated in CD34+ [Gene ID=947] hematopoetic cells by expression of NUP98-HOXA9 fusion [Gene ID=4928 3205] off a retroviral vector at 10 days after transduction.	www.broad.mit.e...
Broad CADWELL_ATG16L1_TARGETS_UP	View Gene Set	0.0001316	83	0.002298	137	Genes up-regulated in Paneth cell (part of intestiinal epithelium) of mice with hypomorphic (reduced function) form of ATG16L1 [Gene ID=55054].	www.broad.mit.e...
Broad VERHAAK_AML_WITH_NPM1_MUTATED_DN	View Gene Set	0.0001389	241	0.002408	138	Genes down-regulated in acute myeloid leukemia (AML) patients with mutated NPM1 [Gene ID=4869].	www.broad.mit.e...
Broad LIAO_METASTASIS	View Gene Set	0.00014	513	0.002409	139	Genes up-regulated in the samples with intrahepatic metastatic hepatocellular carcinoma (HCC) vs primary HCC.	www.broad.mit.e...
Broad GAUSSMANN_MLL_AF4_FUSION_TARGETS_F_UP	View Gene Set	0.0001797	131	0.003071	140	Up-regualted genes from the set F (Fig. 5a): specific signature shared by cells expressing AF4-MLL [Gene ID=4299 4297] alone and those expressing both AF4-MLL and MLL-AF4 fusion proteins.	www.broad.mit.e...
Broad TANG_SENESCENCE_TP53_TARGETS_DN	View Gene Set	0.0001833	40	0.00311	141	Genes down-regulated in WI-38 cells (senescent primary fibroblasts) after inactivation of TP53 [Gene ID=7157] by GSE56 polypeptide.	www.broad.mit.e...
Broad BROWNE_HCMV_INFECTION_48HR_UP	View Gene Set	0.000187	175	0.00315	142	Genes up-regulated in primary fibroblast cell culture after infection with HCMV (AD169 strain) at 48 h time point that were not up-regulated at the previous time point 24 h.	www.broad.mit.e...
Broad CHEN_HOXA5_TARGETS_6HR_UP	View Gene Set	0.0001922	10	0.003214	143	Differentially expressed genes 6 hr after tinduction of HoxA5 [Gene ID=3205] expression in a breast cancer cell line.	www.broad.mit.e...
Broad KIM_LRRC3B_TARGETS	View Gene Set	0.000199	30	0.003306	144	Immune response genes up-regulated in zenograft tumors formed by SNU-601 cells (gastric cancer) made to express LRRC3B [Gene ID=116135].	www.broad.mit.e...
Broad NOJIMA_SFRP2_TARGETS_DN	View Gene Set	0.0002043	25	0.00337	145	Cellular proliferation growth apoptosis and Wnt signaling genes up-regulated in SNU638 cells (gastric cancer) by overexpression of SFRP2 [Gene ID=6423] off a plasmid vector.	www.broad.mit.e...
Broad GRAHAM_CML_QUIESCENT_VS_NORMAL_QUIESCENT_UP	View Gene Set	0.0002074	86	0.003398	146	Genes up-regulated in quiescent (G0) CD34+ [Gene ID=8842] cells isolated from peripheral blood of CML (chronic myeloid leukemia) patients compared to the quiescent cells from normal donors.	www.broad.mit.e...
Broad XU_AKT1_TARGETS_6HR	View Gene Set	0.0002108	24	0.003431	147	Genes up-regulated in DU-145 cells (prostate cancer) expressing a dominant negative form of AKT1 [Gene ID=207] upon sham-treatment for 6 hr (as a control for the HGF [Gene ID=3082] experiments).	www.broad.mit.e...
Broad NUNODA_RESPONSE_TO_DASATINIB_IMATINIB_UP	View Gene Set	0.000227	28	0.00361	148	Genes up-regulated in K562 cells (bone marrow) after treatment with dasatinib [PubChem=3062316] or imatinib [PubChem=5291].	www.broad.mit.e...
Broad HALMOS_CEBPA_TARGETS_UP	View Gene Set	0.0002265	42	0.00361	148	Genes up-regulated in H358 cells (lung cancer) by inducible expression of CEBPA [Gene ID=1050] off plasmid vector.	www.broad.mit.e...
Broad MASSARWEH_TAMOXIFEN_RESISTANCE_DN	View Gene Set	0.0002276	235	0.00361	148	Genes down-regulated in breast cancer tumors (formed by MCF-7 xenografts) resistant to tamoxifen [PubChem=5376].	www.broad.mit.e...
Broad LIANG_SILENCED_BY_METHYLATION_2	View Gene Set	0.0002279	35	0.00361	148	Genes up-regulated in T24 cells (bladder carcinoma) after treatment with decitabine (5-aza-2'-deoxycytidine) [PubChem=451668].	www.broad.mit.e...
Broad HARRIS_HYPOXIA	View Gene Set	0.0002402	79	0.003779	152	Genes known to be induced by hypoxia	www.broad.mit.e...
Broad HORIUCHI_WTAP_TARGETS_UP	View Gene Set	0.0002549	284	0.003986	153	Genes up-regulated in primary endothelial cells (HUVEC) after knockdown of WTAP [Gene ID=9589] by RNAi.	www.broad.mit.e...
Broad IIZUKA_RECURRENT_LIVER_CANCER	View Gene Set	0.0002588	10	0.00402	154	Genes used to construct a to develop a system for accurate prediction of early intrahepatic recurrence of hepatocellular carcinoma (HCC).	www.broad.mit.e...
Broad VECCHI_GASTRIC_CANCER_ADVANCED_VS_EARLY_UP	View Gene Set	0.0002742	159	0.004216	155	Up-regulated genes distinguishing between two subtypes of gastric cancer: advanced (AGC) and early (EGC).	www.broad.mit.e...
Broad DODD_NASOPHARYNGEAL_CARCINOMA_UP	View Gene Set	0.0002749	1582	0.004216	155	Genes up-regulated in nasopharyngeal carcinoma (NPC) compared to the normal tissue.	www.broad.mit.e...
Broad TONKS_TARGETS_OF_RUNX1_RUNX1T1_FUSION_HSC_UP	View Gene Set	0.000305	182	0.004647	157	Genes up-regulated in normal hematopoietic progenitors by RUNX1-RUNX1T1 [Gene ID=861 862] fusion.	www.broad.mit.e...
Broad BOWIE_RESPONSE_TO_EXTRACELLULAR_MATRIX	View Gene Set	0.0003119	10	0.004692	158	Genes up-regulated by growing HMEC-E6 cells (mammary epithelial cells damaged by expression of HPV-16 E6 [Gene ID=1489078]) in extracellular matrix (ECM).	www.broad.mit.e...
Broad BENPORATH_ES_CORE_NINE_CORRELATED	View Gene Set	0.0003112	100	0.004692	158	Breast cancer compendium: 100 transcription regulators showing most correlated expression with the 9 'embryonic stem cell' transcription factors that are preferentially and coordinately overexpressed in the high-grade ER-negative breast cancer tumors.	www.broad.mit.e...
Broad HOLLMAN_APOPTOSIS_VIA_CD40_DN	View Gene Set	0.000318	255	0.004741	160	Genes down-regulated in DLBCL (diffuse large B-cell lymphoma) cell lines sensitive to stimulation of CD40 [Gene ID=958] relative to the resistant ones.	www.broad.mit.e...
Broad RIZ_ERYTHROID_DIFFERENTIATION	View Gene Set	0.0003191	71	0.004741	160	Selected gradually up-regulated genes in the TLX1 [Gene ID=3195] Tet On iEBHX15-4 cells (pro-erythroblasts).	www.broad.mit.e...
Broad ODONNELL_TARGETS_OF_MYC_AND_TFRC_DN	View Gene Set	0.0003214	42	0.004745	162	Genes down-regulated in P493-6 cells (B lymphocyte) by MYC [Gene ID=4609] and up-regulated by RNAi knockdown of TFRC [Gene ID=7037].	www.broad.mit.e...
Broad HUMMEL_BURKITTS_LYMPHOMA_UP	View Gene Set	0.0003257	38	0.00478	163	Up-regulated genes constituting the molecular signature of Burkitt 's lymphoma.	www.broad.mit.e...
Broad FURUKAWA_DUSP6_TARGETS_PCI35_UP	View Gene Set	0.000337	64	0.004915	164	Genes up-regulated in PCI-35 cells (pancreatic cancer lack endogenous DUSP6 [Gene ID=1848]) upon expression of DUSP6 off an adenoviral vector.	www.broad.mit.e...
Broad RUTELLA_RESPONSE_TO_HGF_VS_CSF2RB_AND_IL4_DN	View Gene Set	0.0003477	238	0.00504	165	Genes down-regulated in peripheral blood mononucleocytes by HGF [Gene ID=3082] compared to those regulated by CSF2RB (GM-CSF) [Gene ID=1437] and IL4 [Gene ID=3565].	www.broad.mit.e...
Broad SCIBETTA_KDM5B_TARGETS_DN	View Gene Set	0.000356	76	0.005066	166	Genes down-regulated in HB2 cells (mammary epithelium) upon expression of KDM5B [Gene ID=10765] off an adenoviral vector.	www.broad.mit.e...
Broad JAATINEN_HEMATOPOIETIC_STEM_CELL_DN	View Gene Set	0.0003598	215	0.005066	166	Genes up-regulated in CD133+ [Gene ID=8842] cells (hematopoietic stem cells HSC) compared to the CD133- cells.	www.broad.mit.e...
Broad CERVERA_SDHB_TARGETS_2	View Gene Set	0.0003606	109	0.005066	166	Genes present but differentially expressed between Hep3B cells (hepatocellular carcinoma HCC) with RNAi knockdown of SDHB [Gene ID=6390] and control cells.	www.broad.mit.e...
Broad AMUNDSON_GAMMA_RADIATION_RESPONSE	View Gene Set	0.0003621	36	0.005066	166	Genes down-regulated across the entire panel of NCI-60 cell lines in response to gamma radiation.	www.broad.mit.e...
Broad LEE_EARLY_T_LYMPHOCYTE_DN	View Gene Set	0.0003555	44	0.005066	166	Genes down-regulated at early stages of progenitor T lymphocyte maturation compared to the late stages.	www.broad.mit.e...
Broad UROSEVIC_RESPONSE_TO_IMIQUIMOD	View Gene Set	0.0003573	16	0.005066	166	Interferon cluster genes up-regulated in skin tumors treated with imiquimod [PubChem=57469].	www.broad.mit.e...
Broad RUTELLA_RESPONSE_TO_CSF2RB_AND_IL4_DN	View Gene Set	0.0003711	301	0.005161	172	Genes down-regulated in peripheral blood monocytes by CSF2RB (GM-CSF) [Gene ID=1437] and IL4 [Gene ID=3565].	www.broad.mit.e...
Broad TAKADA_GASTRIC_CANCER_COPY_NUMBER_UP	View Gene Set	0.0003818	7	0.005259	173	Candidate genes in the regions of copy number gain in gastric cancer cell lines.	www.broad.mit.e...
Broad LOPEZ_MESOTHELIOMA_SURVIVAL_UP	View Gene Set	0.0003826	11	0.005259	173	Top genes associated with favorable survival after surgery of patients with epithelioid mesothelioma.	www.broad.mit.e...
Broad RUIZ_TNC_TARGETS_UP	View Gene Set	0.0003956	145	0.005408	175	Genes up-regulated in T98G cells (glioblastoma) by TNC [Gene ID=3371].	www.broad.mit.e...
Broad SCHAVOLT_TARGETS_OF_TP53_AND_TP63	View Gene Set	0.0004069	16	0.00553	176	Genes up-regulated by TP53 [Gene ID=7157] and down-regulated by an isoform of TP63 [Gene ID=8626] in primary HEK cells (epidermal keratinocytes).	www.broad.mit.e...
Broad MATHEW_FANCONI_ANEMIA_GENES	View Gene Set	0.0004531	11	0.006123	177	Genes identified with the Fanconi anemia (FA) and the FA pathway.	www.broad.mit.e...
Broad MCBRYAN_PUBERTAL_BREAST_5_6WK_UP	View Gene Set	0.000492	108	0.006612	178	Genes up-regulated during pubertal mammary gland development between week 5 and 6.	www.broad.mit.e...
Broad FLECHNER_BIOPSY_KIDNEY_TRANSPLANT_REJECTED_VS_OK_UP	View Gene Set	0.0005055	86	0.006755	179	Genes differentially expressed in kidney biopsies from patients with acute transplant rejection compared to the biopsies from patients with well functioning kidneys more than 1-year post transplant.	www.broad.mit.e...
Broad LOPEZ_MESOTELIOMA_SURVIVAL_TIME_UP	View Gene Set	0.0005222	13	0.00694	180	Top genes higher expressed in short term mesothelioma survivors.	www.broad.mit.e...
Broad OSWALD_HEMATOPOIETIC_STEM_CELL_IN_COLLAGEN_GEL_UP	View Gene Set	0.00053	224	0.006966	181	Genes up-regulated in hematopoietic stem cells (HSC CD34+ [Gene ID=947]) cultured in a three-dimentional collagen gel compared to the cells grown in suspension.	www.broad.mit.e...
Broad OSWALD_HEMATOPOIETIC_STEM_CELL_IN_COLLAGEN_GEL_DN	View Gene Set	0.00053	224	0.006966	181	Genes down-regulated in hematopoietic stem cells (HSC CD34+ [Gene ID=947]) cultured in a three-dimentional collagen gel compared to the cells grown in suspension.	www.broad.mit.e...
Broad STEIN_ESR1_TARGETS	View Gene Set	0.0005336	84	0.006975	183	Genes regulated by ESR1 [Gene ID=2099] in MCF-7 cells (breast cancer).	www.broad.mit.e...
Broad TURASHVILI_BREAST_DUCTAL_CARCINOMA_VS_LOBULAR_NORMAL_DN	View Gene Set	0.000548	64	0.007124	184	Genes down-regulated in ductal carcinoma vs normal lobular breast cells.	www.broad.mit.e...
Broad CHIARADONNA_NEOPLASTIC_TRANSFORMATION_KRAS_UP	View Gene Set	0.0005615	116	0.007236	185	Genes up-regulated in transformed NIH3T3 cells (fibroblasts transformed by activated KRAS [Gene ID=3845]) vs normal cells.	www.broad.mit.e...
Broad HELLER_HDAC_TARGETS_SILENCED_BY_METHYLATION_UP	View Gene Set	0.0005627	399	0.007236	185	Genes up-regulated in multiple myeloma (MM) cell lines treated with both decitabine [PubChem=451668] TSA [PubChem=5562].	www.broad.mit.e...
Broad CASORELLI_ACUTE_PROMYELOCYTIC_LEUKEMIA_UP	View Gene Set	0.0006184	165	0.00791	187	Genes up-regulated in APL (acute promyeolocytic leukemia) blasts expressing PML-RARA fusion [Gene ID=5371 5914] compared to normal promyeloblasts.	www.broad.mit.e...
Broad TAKEDA_TARGETS_OF_NUP98_HOXA9_FUSION_8D_UP	View Gene Set	0.000636	153	0.008092	188	Genes up-regulated in CD34+ [Gene ID=947] hematopoetic cells by expression of NUP98-HOXA9 fusion [Gene ID=4928 3205] off a retroviral vector at 8 days after transduction.	www.broad.mit.e...
Broad YANG_BREAST_CANCER_ESR1_DN	View Gene Set	0.0006586	19	0.008335	189	Genes down-regulated in early primary breast tumors expressing ESR1 [Gene ID=2099] vs the ESR1 negative ones.	www.broad.mit.e...
Broad VERHAAK_AML_WITH_NPM1_MUTATED_UP	View Gene Set	0.0006906	178	0.008695	190	Genes up-regulated in acute myeloid leukemia (AML) patients with mutated NPM1 [Gene ID=4869].	www.broad.mit.e...
Broad LINDSTEDT_DENDRITIC_CELL_MATURATION_B	View Gene Set	0.0007108	47	0.008901	191	Maturation of monocyte-derived dendritic cells (DC) in response to inflammatory stimuli: genes up-regulated both at 8 hr and 48 hr after the stimulation (cluster B).	www.broad.mit.e...
Broad FARMER_BREAST_CANCER_APOCRINE VS LUMINAL	View Gene Set	0.0007324	312	0.009125	192	Genes which best discriminate between two groups of breast cancer according to the status of ESR1 and AR [Gene ID=2099 367]: apocrine (ESR1- AR+) and luminal (ESR1+ AR+).	www.broad.mit.e...
Broad SCHWAB_TARGETS_OF_BMYB_S427G_UP	View Gene Set	0.0007549	13	0.009308	193	Genes up-regulated in 293 cells (embryonic kidney) expressing the polymorphic variant S427G [SNP ID=rs2070235] of BMYB [Gene ID=4605].	www.broad.mit.e...
Broad SCHWAB_TARGETS_OF_BMYB_I624M_UP	View Gene Set	0.0007549	13	0.009308	193	Genes up-regulated in 293 cells (embryonic kidney) expressing the polymorphic variant I624M (SNP ID=rs11556379] of BMYB [Gene ID=4605].	www.broad.mit.e...
Broad ENGELMANN_CANCER_PROGENITORS_DN	View Gene Set	0.0007655	69	0.00939	195	Down-regulated genes in the cancer progenitor (stem) cells corresponding to side population (SP) MCF7 cells (breast cancer) positive for MUC1 [Gene ID=4582].	www.broad.mit.e...
Broad KIM_RESPONSE_TO_TSA_AND_DECITABINE_UP	View Gene Set	0.0008269	126	0.01009	196	Genes up-regulated in glioma cell lines treated with both decitabine [PubChem=451668] and TSA [PubChem=5562].	www.broad.mit.e...
Broad BENPORATH_PROLIFERATION	View Gene Set	0.0008645	140	0.01044	197	Set 'Proliferation Cluster': genes defined in human breast tumor expression data.	www.broad.mit.e...
Broad BECKER_TAMOXIFEN_RESISTANCE_DN	View Gene Set	0.0008617	48	0.01044	197	Genes down-regulated in a breast cancer cell line resistant to tamoxifen [PubChem ID=5376] compared to the parental line sensitive to the drug.	www.broad.mit.e...
Broad WU_CELL_MIGRATION	View Gene Set	0.0008751	182	0.01052	199	Genes associated with migration rate of 40 human bladder cancer cells.	www.broad.mit.e...
Broad BROWNE_HCMV_INFECTION_2HR_UP	View Gene Set	0.0009073	39	0.01085	200	Genes up-regulated in primary fibroblast cell culture point after infection with HCMV (AD169 strain) at 2 h time point that were not up-regulated at the previous time point 1 h.	www.broad.mit.e...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Broad BIOCARTA_P53_PATHWAY	View Gene Set	2.293e-05	16	0.004976	1	p53 Signaling Pathway	www.broad.mit.e...
Broad BIOCARTA_ATM_PATHWAY	View Gene Set	7.621e-05	20	0.008269	2	ATM Signaling Pathway	www.broad.mit.e...
Broad BIOCARTA_CELLCYCLE_PATHWAY	View Gene Set	0.0002619	23	0.01421	3	Cyclins and Cell Cycle Regulation	www.broad.mit.e...
Broad BIOCARTA_ATRBRCA_PATHWAY	View Gene Set	0.0002086	21	0.01421	3	Role of BRCA1 BRCA2 and ATR in Cancer Susceptibility	www.broad.mit.e...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Broad KEGG_DNA_REPLICATION	View Gene Set	8.012e-08	36	1.49e-05	1	DNA replication	www.broad.mit.e...
Broad KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION	View Gene Set	8.64e-06	267	0.0008035	2	Cytokine-cytokine receptor interaction	www.broad.mit.e...
Broad KEGG_P53_SIGNALING_PATHWAY	View Gene Set	4.851e-05	69	0.003007	3	p53 signaling pathway	www.broad.mit.e...
Broad KEGG_HOMOLOGOUS_RECOMBINATION	View Gene Set	8.656e-05	28	0.004025	4	Homologous recombination	www.broad.mit.e...
Broad KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION	View Gene Set	0.0002024	272	0.007529	5	Neuroactive ligand-receptor interaction	www.broad.mit.e...
Broad KEGG_CELL_CYCLE	View Gene Set	0.0002685	128	0.008323	6	Cell cycle	www.broad.mit.e...
Broad KEGG_METABOLISM_OF_XENOBIOTICS_BY_CYTOCHROME_P450	View Gene Set	0.000704	70	0.01695	7	Metabolism of xenobiotics by cytochrome P450	www.broad.mit.e...
Broad KEGG_MISMATCH_REPAIR	View Gene Set	0.0007291	23	0.01695	7	Mismatch repair	www.broad.mit.e...
Broad KEGG_ECM_RECEPTOR_INTERACTION	View Gene Set	0.0008918	84	0.01843	9	ECM-receptor interaction	www.broad.mit.e...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Broad REACTOME_DNA_STRAND_ELONGATION	View Gene Set	1.404e-08	31	6.035e-06	1	Genes involved in DNA strand elongation	www.broad.mit.e...
Broad REACTOME_G2_M_CHECKPOINTS	View Gene Set	1.257e-07	43	2.702e-05	2	Genes involved in G2/M Checkpoints	www.broad.mit.e...
Broad REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS	View Gene Set	6.182e-07	37	8.861e-05	3	Genes involved in Activation of ATR in response to replication stress	www.broad.mit.e...
Broad REACTOME_ACTIVATION_OF_THE_PRE_REPLICATIVE_COMPLEX	View Gene Set	5.764e-06	30	0.000548	4	Genes involved in Activation of the pre-replicative complex	www.broad.mit.e...
Broad REACTOME_LAGGING_STRAND_SYNTHESIS	View Gene Set	6.372e-06	20	0.000548	4	Genes involved in Lagging Strand Synthesis	www.broad.mit.e...
Broad REACTOME_GPCR_LIGAND_BINDING	View Gene Set	1.808e-05	392	0.001295	6	Genes involved in GPCR ligand binding	www.broad.mit.e...
Broad REACTOME_POLYMERASE_SWITCHING	View Gene Set	2.375e-05	14	0.001459	7	Genes involved in Polymerase switching	www.broad.mit.e...
Broad REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS	View Gene Set	3.416e-05	292	0.001836	8	Genes involved in Class A/1 (Rhodopsin-like receptors)	www.broad.mit.e...
Broad REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION	View Gene Set	7.355e-05	33	0.003163	9	Genes involved in E2F mediated regulation of DNA replication	www.broad.mit.e...
Broad REACTOME_E2F_TRANSCRIPTIONAL_TARGETS_AT_G1_S	View Gene Set	6.954e-05	22	0.003163	9	Genes involved in E2F transcriptional targets at G1/S	www.broad.mit.e...
Broad REACTOME_DOWNSTREAM_EVENTS_IN_GPCR_SIGNALING	View Gene Set	8.982e-05	448	0.003511	11	Genes involved in Downstream events in GPCR signaling	www.broad.mit.e...
Broad REACTOME_EXTENSION_OF_TELOMERES	View Gene Set	0.000142	28	0.005059	12	Genes involved in Extension of Telomeres	www.broad.mit.e...
Broad REACTOME_G_ALPHA_I_SIGNALLING_EVENTS	View Gene Set	0.0001529	177	0.005059	12	Genes involved in G alpha (i) signalling events	www.broad.mit.e...
Broad REACTOME_FANCONI_ANEMIA_PATHWAY	View Gene Set	0.0001988	15	0.006106	14	Genes involved in Fanconi Anemia pathway	www.broad.mit.e...
Broad REACTOME_REPAIR_SYNTHESIS_OF_PATCH_27_30_BASES_LONG_BY_DNA_POLYMERASE	View Gene Set	0.000234	15	0.006708	15	Genes involved in Repair synthesis of patch ~27-30 bases long by DNA polymerase	www.broad.mit.e...
Broad REACTOME_PHASE_1_FUNCTIONALIZATION_OF_COMPOUNDS	View Gene Set	0.0002893	67	0.007337	16	Genes involved in Phase 1 - Functionalization of compounds	www.broad.mit.e...
Broad REACTOME_UNWINDING_OF_DNA	View Gene Set	0.0002901	11	0.007337	16	Genes involved in Unwinding of DNA	www.broad.mit.e...
Broad REACTOME_CYTOCHROME_P450_ARRANGED_BY_SUBSTRATE_TYPE	View Gene Set	0.0004085	49	0.00976	18	Genes involved in Cytochrome P450 - arranged by substrate type	www.broad.mit.e...
Broad REACTOME_REMOVAL_OF_THE_FLAP_INTERMEDIATE	View Gene Set	0.000935	14	0.02116	19	Genes involved in Removal of the Flap Intermediate	www.broad.mit.e...
Broad REACTOME_IMMUNOREGULATORY_INTERACTIONS_BETWEEN_A_LYMPHOID_AND_A_NON_LYMPHOID_CELL	View Gene Set	0.00122	106	0.02624	20	Genes involved in Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell	www.broad.mit.e...
Broad REACTOME_PEPTIDE_LIGAND_BINDING_RECEPTORS	View Gene Set	0.001461	173	0.02992	21	Genes involved in Peptide ligand-binding receptors	www.broad.mit.e...
Broad REACTOME_BIOLOGICAL_OXIDATIONS	View Gene Set	0.002056	127	0.03986	22	Genes involved in Biological oxidations	www.broad.mit.e...
Broad REACTOME_CELL_CYCLE_MITOTIC	View Gene Set	0.002132	306	0.03986	22	Genes involved in Cell Cycle Mitotic	www.broad.mit.e...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Broad ACATTCC MIR-1 MIR-206	View Gene Set	4.035e-22	248	8.917e-20	1	Targets of MicroRNA ACATTCC MIR-1 MIR-206	www.broad.mit.e... MIR-1... MIR-206...
Broad AACATTC MIR-409-3P	View Gene Set	5.632e-07	115	6.224e-05	2	Targets of MicroRNA AACATTC MIR-409-3P	www.broad.mit.e... MIR-409-3P...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Broad V$NKX61_01	View Gene Set	1.982e-06	177	0.0003841	1	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TWTTTAATTGGTT which matches annotation for NKX6-1: NK6 transcription factor related locus 1 (Drosophila)	www.broad.mit.e...
Broad V$E2F_Q6_01	View Gene Set	1.584e-06	167	0.0003841	1	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NKCGCGCSAAAN which matches annotation for E2F<br> TFDP1: transcription factor Dp-1	www.broad.mit.e...
Broad CAGGTG_V$E12_Q6	View Gene Set	2.198e-06	1818	0.0003841	1	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif CAGGTG which matches annotation for TCF3: transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)	www.broad.mit.e...
Broad TATAAA_V$TATA_01	View Gene Set	2.498e-06	1012	0.0003841	1	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TATAAA which matches annotation for TAF<br> TATA	www.broad.mit.e...
Broad V$E2F_Q4_01	View Gene Set	5.107e-06	171	0.0006281	5	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NCSCGCSAAAN which matches annotation for E2F<br> TFDP1: transcription factor Dp-1	www.broad.mit.e...
Broad V$LHX3_01	View Gene Set	1.739e-05	182	0.001783	6	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif AATTAATTAA which matches annotation for LHX3: LIM homeobox 3	www.broad.mit.e...
Broad V$E2F_03	View Gene Set	2.777e-05	171	0.00244	7	Genes with promoter regions [-2kb 2kb] around transcription start site containing motif TTTSGCGCGMNR. Motif does not match any known transcription factor	www.broad.mit.e...
Broad V$E2F_Q3_01	View Gene Set	3.311e-05	171	0.002545	8	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TTTSGCGSG which matches annotation for E2F<br> TFDP1: transcription factor Dp-1	www.broad.mit.e...
Broad V$HNF1_01	View Gene Set	4.177e-05	183	0.002855	9	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GGTTAATNWTTAMCN which matches annotation for TCF1: transcription factor 1 hepatic; LF-B1 hepatic nuclear factor (HNF1) albumin proximal factor	www.broad.mit.e...
Broad AACTTT_UNKNOWN	View Gene Set	0.0001066	1437	0.006555	10	Genes with promoter regions [-2kb 2kb] around transcription start site containing motif AACTTT. Motif does not match any known transcription factor	www.broad.mit.e...
Broad SGCGSSAAA_V$E2F1DP2_01	View Gene Set	0.000118	122	0.006598	11	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif SGCGSSAAA which matches annotation for E2F1: E2F transcription factor 1<br> TFDP1: transcription factor Dp-1<br> RB1: retinoblastoma 1 (including osteosarcoma)	www.broad.mit.e...
Broad V$NF1_Q6	View Gene Set	0.0001531	206	0.007427	12	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNTTGGCNNNNNNCCNNN which matches annotation for NF1: neurofibromin 1 (neurofibromatosis von Recklinghausen disease Watson disease)	www.broad.mit.e...
Broad CAGCTG_V$AP4_Q5	View Gene Set	0.000157	1129	0.007427	12	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif CAGCTG which matches annotation for REPIN1: replication initiator 1	www.broad.mit.e...
Broad V$GATA6_01	View Gene Set	0.0001786	191	0.007846	14	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNNGATWANN which matches annotation for GATA6: GATA binding protein 6	www.broad.mit.e...
Broad V$E2F1_Q4_01	View Gene Set	0.0002044	167	0.007931	15	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TTTSGCGSG which matches annotation for E2F<br> TFDP1: transcription factor Dp-1	www.broad.mit.e...
Broad TGGAAA_V$NFAT_Q4_01	View Gene Set	0.0002063	1403	0.007931	15	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TGGAAA which matches annotation for NFAT<br> NFATC	www.broad.mit.e...
Broad V$STAT5A_03	View Gene Set	0.000233	191	0.008026	17	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NAWTTCYN which matches annotation for STAT5A: signal transducer and activator of transcription 5A	www.broad.mit.e...
Broad GGATTA_V$PITX2_Q2	View Gene Set	0.0002349	456	0.008026	17	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GGATTA which matches annotation for PITX2: paired-like homeodomain transcription factor 2	www.broad.mit.e...
Broad RYAAAKNNNNNNTTGW_UNKNOWN	View Gene Set	0.0004261	71	0.01379	19	Genes with promoter regions [-2kb 2kb] around transcription start site containing motif RYAAAKNNNNNNTTGW. Motif does not match any known transcription factor	www.broad.mit.e...
Broad V$HNF1_C	View Gene Set	0.0004779	174	0.0147	20	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif DGTTAATKAWTNACCAM which matches annotation for TCF1: transcription factor 1 hepatic; LF-B1 hepatic nuclear factor (HNF1) albumin proximal factor	www.broad.mit.e...
Broad V$SRY_02	View Gene Set	0.0005828	190	0.0168	21	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NWWAACAAWANN which matches annotation for SRY: sex determining region Y	www.broad.mit.e...
Broad TTGTTT_V$FOXO4_01	View Gene Set	0.0006011	1507	0.0168	21	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TTGTTT which matches annotation for MLLT7: myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog Drosophila); translocated to 7	www.broad.mit.e...
Broad V$HFH8_01	View Gene Set	0.000733	167	0.0196	23	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNNTGTTTATNTR which matches annotation for FOXJ1: forkhead box J1	www.broad.mit.e...
Broad YTAATTAA_V$LHX3_01	View Gene Set	0.0008168	144	0.02093	24	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif YTAATTAA which matches annotation for LHX3: LIM homeobox 3	www.broad.mit.e...
Broad V$CRX_Q4	View Gene Set	0.0008869	207	0.02182	25	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif YNNNTAATCYCMN which matches annotation for CRX: cone-rod homeobox	www.broad.mit.e...
Broad V$ISRE_01	View Gene Set	0.0009829	171	0.02325	26	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif CAGTTTCWCTTTYCC which matches annotation for STAT1: signal transducer and activator of transcription 1 91kDa<br> STAT2: signal transducer and activator of transcription 2 113kDa	www.broad.mit.e...
Broad V$E2F1_Q6	View Gene Set	0.001189	167	0.02709	27	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TTTSGCGS which matches annotation for E2F1: E2F transcription factor 1	www.broad.mit.e...
Broad GATAAGR_V$GATA_C	View Gene Set	0.001323	232	0.02907	28	Genes with promoter regions [-2kb 2kb] around transcription start site containing motif GATAAGR. Motif does not match any known transcription factor	www.broad.mit.e...
Broad V$LYF1_01	View Gene Set	0.001563	204	0.03044	29	Genes with promoter regions [-2kb 2kb] around transcription start site containing motif TTTGGGAGR. Motif does not match any known transcription factor	www.broad.mit.e...
Broad V$AFP1_Q6	View Gene Set	0.001509	198	0.03044	29	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif ATTAAYTRCAC which matches annotation for ZHX2: zinc fingers and homeoboxes 2	www.broad.mit.e...
Broad V$PXR_Q2	View Gene Set	0.001459	195	0.03044	29	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif RRGGTYANTRNM which matches annotation for NR1H4: nuclear receptor subfamily 1 group H member 4	www.broad.mit.e...
Broad TGTTTGY_V$HNF3_Q6	View Gene Set	0.001584	560	0.03044	29	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TGTTTGY which matches annotation for FOXA1: forkhead box A1	www.broad.mit.e...
Broad V$E2F1DP1_01	View Gene Set	0.002082	169	0.03659	33	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TTTCSCGC which matches annotation for E2F1: E2F transcription factor 1<br> TFDP1: transcription factor Dp-1	www.broad.mit.e...
Broad V$E2F1DP2_01	View Gene Set	0.002082	169	0.03659	33	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TTTSSCGC which matches annotation for E2F1: E2F transcription factor 1<br> TFDP2: transcription factor Dp-2 (E2F dimerization partner 2)	www.broad.mit.e...
Broad V$E2F4DP2_01	View Gene Set	0.002082	169	0.03659	33	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TTTCSCGC which matches annotation for E2F4: E2F transcription factor 4 p107/p130-binding<br> TFDP2: transcription factor Dp-2 (E2F dimerization partner 2)	www.broad.mit.e...
Broad V$RP58_01	View Gene Set	0.002437	179	0.04163	36	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNAACATCTGGA which matches annotation for ZNF238: zinc finger protein 238	www.broad.mit.e...
Broad V$PTF1BETA_Q6	View Gene Set	0.002861	179	0.04756	37	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GRGAAAMBBWCAGS which matches annotation for PTF1A: pancreas specific transcription factor 1a	www.broad.mit.e...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Broad GNF2_PCNA	View Gene Set	3.102e-16	62	1.324e-13	1	Neighborhood of PCNA	www.broad.mit.e...
Broad GNF2_CCNA2	View Gene Set	4.048e-15	62	8.642e-13	2	Neighborhood of CCNA2	www.broad.mit.e...
Broad GNF2_CDC2	View Gene Set	8.275e-15	56	1.178e-12	3	Neighborhood of CDC2	www.broad.mit.e...
Broad GNF2_CENPF	View Gene Set	3.016e-14	56	3.22e-12	4	Neighborhood of CENPF	www.broad.mit.e...
Broad GNF2_HMMR	View Gene Set	9.838e-12	43	8.402e-10	5	Neighborhood of HMMR	www.broad.mit.e...
Broad GNF2_CDC20	View Gene Set	2.565e-11	52	1.565e-09	6	Neighborhood of CDC20	www.broad.mit.e...
Broad GNF2_CCNB2	View Gene Set	2.26e-11	53	1.565e-09	6	Neighborhood of CCNB2	www.broad.mit.e...
Broad GNF2_MCM4	View Gene Set	3.738e-11	50	1.995e-09	8	Neighborhood of MCM4	www.broad.mit.e...
Broad GNF2_SMC4L1	View Gene Set	2.686e-10	75	1.274e-08	9	Neighborhood of SMC4L1	www.broad.mit.e...
Broad GNF2_CENPE	View Gene Set	4.751e-10	37	2.029e-08	10	Neighborhood of CENPE	www.broad.mit.e...
Broad GNF2_TTK	View Gene Set	5.264e-10	34	2.044e-08	11	Neighborhood of TTK	www.broad.mit.e...
Broad GNF2_SMC2L1	View Gene Set	1.367e-09	30	4.863e-08	12	Neighborhood of SMC2L1	www.broad.mit.e...
Broad GNF2_FEN1	View Gene Set	1.531e-09	49	5.029e-08	13	Neighborhood of FEN1	www.broad.mit.e...
Broad GNF2_CKS2	View Gene Set	6.14e-09	45	1.873e-07	14	Neighborhood of CKS2	www.broad.mit.e...
Broad GNF2_RFC4	View Gene Set	2.019e-08	57	5.388e-07	15	Neighborhood of RFC4	www.broad.mit.e...
Broad GNF2_RRM2	View Gene Set	1.895e-08	36	5.388e-07	15	Neighborhood of RRM2	www.broad.mit.e...
Broad GNF2_RRM1	View Gene Set	5.557e-08	82	1.396e-06	17	Neighborhood of RRM1	www.broad.mit.e...
Broad GNF2_MCM5	View Gene Set	1.082e-07	51	2.567e-06	18	Neighborhood of MCM5	www.broad.mit.e...
Broad GNF2_MKI67	View Gene Set	2.894e-07	26	6.503e-06	19	Neighborhood of MKI67	www.broad.mit.e...
Broad GNF2_BUB1B	View Gene Set	3.615e-07	46	7.719e-06	20	Neighborhood of BUB1B	www.broad.mit.e...
Broad GNF2_H2AFX	View Gene Set	4.703e-07	28	9.563e-06	21	Neighborhood of H2AFX	www.broad.mit.e...
Broad GNF2_ESPL1	View Gene Set	1.48e-06	35	2.872e-05	22	Neighborhood of ESPL1	www.broad.mit.e...
Broad GNF2_BUB1	View Gene Set	4.424e-06	25	8.213e-05	23	Neighborhood of BUB1	www.broad.mit.e...
Broad MORF_PAX7	View Gene Set	6.86e-06	251	0.0001221	24	Neighborhood of PAX7	www.broad.mit.e...
Broad MORF_MAGEA9	View Gene Set	1.021e-05	405	0.0001744	25	Neighborhood of MAGEA9	www.broad.mit.e...
Broad MORF_CTSB	View Gene Set	0.0001272	182	0.002089	26	Neighborhood of CTSB	www.broad.mit.e...
Broad MORF_MDM2	View Gene Set	0.0001397	269	0.00221	27	Neighborhood of MDM2	www.broad.mit.e...
Broad MORF_RAD51L3	View Gene Set	0.0001798	371	0.002742	28	Neighborhood of RAD51L3	www.broad.mit.e...
Broad GNF2_RFC3	View Gene Set	0.0003181	38	0.004684	29	Neighborhood of RFC3	www.broad.mit.e...
Broad MORF_MAP2K7	View Gene Set	0.0004393	179	0.006252	30	Neighborhood of MAP2K7	www.broad.mit.e...
Broad GNF2_RPA1	View Gene Set	0.0005858	20	0.008069	31	Neighborhood of RPA1	www.broad.mit.e...
Broad MORF_IL4	View Gene Set	0.0006053	186	0.008077	32	Neighborhood of IL4	www.broad.mit.e...
Broad GNF2_CASP1	View Gene Set	0.0006508	97	0.008421	33	Neighborhood of CASP1	www.broad.mit.e...
Broad MORF_IFNA1	View Gene Set	0.0007898	198	0.009385	34	Neighborhood of IFNA1	www.broad.mit.e...
Broad MORF_SUPT3H	View Gene Set	0.0007913	318	0.009385	34	Neighborhood of SUPT3H	www.broad.mit.e...
Broad GNF2_MSH2	View Gene Set	0.0007739	26	0.009385	34	Neighborhood of MSH2	www.broad.mit.e...
Broad MORF_NOS2A	View Gene Set	0.0009127	276	0.01053	37	Neighborhood of NOS2A	www.broad.mit.e...
Broad MORF_PTPRR	View Gene Set	0.001099	98	0.01235	38	Neighborhood of PTPRR	www.broad.mit.e...
Broad MORF_CAMK4	View Gene Set	0.001432	281	0.01474	39	Neighborhood of CAMK4	www.broad.mit.e...
Broad MORF_MAGEA8	View Gene Set	0.00145	250	0.01474	39	Neighborhood of MAGEA8	www.broad.mit.e...
Broad GNF2_CKS1B	View Gene Set	0.00143	36	0.01474	39	Neighborhood of CKS1B	www.broad.mit.e...
Broad GNF2_FGR	View Gene Set	0.001429	31	0.01474	39	Neighborhood of FGR	www.broad.mit.e...
Broad GNF2_DNM1	View Gene Set	0.002997	69	0.02911	43	Neighborhood of DNM1	www.broad.mit.e...
Broad GNF2_STAT6	View Gene Set	0.003	75	0.02911	43	Neighborhood of STAT6	www.broad.mit.e...
Broad GNF2_CCNA1	View Gene Set	0.003167	59	0.03006	45	Neighborhood of CCNA1	www.broad.mit.e...
Broad MORF_CDH4	View Gene Set	0.003873	134	0.03595	46	Neighborhood of CDH4	www.broad.mit.e...
Broad CAR_TNFRSF25	View Gene Set	0.004004	30	0.036	47	Neighborhood of TNFRSF25	www.broad.mit.e...
Broad GNF2_TIMP2	View Gene Set	0.004047	45	0.036	47	Neighborhood of TIMP2	www.broad.mit.e...
Broad MORF_FSHR	View Gene Set	0.004571	268	0.03983	49	Neighborhood of FSHR	www.broad.mit.e...
Broad MORF_ERCC4	View Gene Set	0.005181	309	0.0441	50	Neighborhood of ERCC4	www.broad.mit.e...
Broad MORF_FOSL1	View Gene Set	0.005448	386	0.0441	50	Neighborhood of FOSL1	www.broad.mit.e...
Broad MORF_MLLT10	View Gene Set	0.005339	290	0.0441	50	Neighborhood of MLLT10	www.broad.mit.e...
Broad GNF2_CD97	View Gene Set	0.005474	37	0.0441	50	Neighborhood of CD97	www.broad.mit.e...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Broad module_64	View Gene Set	2.442e-13	506	7.918e-11	1	Genes in module_64	www.broad.mit.e...
Broad module_84	View Gene Set	3.488e-13	526	7.918e-11	1	Genes in module_84	www.broad.mit.e...
Broad module_54	View Gene Set	8.006e-12	242	1.069e-09	3	Genes in module_54	www.broad.mit.e...
Broad module_158	View Gene Set	9.421e-12	41	1.069e-09	3	Genes in module_158	www.broad.mit.e...
Broad module_117	View Gene Set	1.31e-11	699	1.19e-09	5	Genes in module_117	www.broad.mit.e...
Broad module_125	View Gene Set	2.316e-11	42	1.752e-09	6	Genes in module_125	www.broad.mit.e...
Broad module_57	View Gene Set	5.229e-10	54	3.392e-08	7	Genes in module_57	www.broad.mit.e...
Broad module_46	View Gene Set	1.393e-09	386	7.206e-08	8	Genes in module_46	www.broad.mit.e...
Broad module_88	View Gene Set	1.429e-09	812	7.206e-08	8	Genes in module_88	www.broad.mit.e...
Broad module_55	View Gene Set	1.606e-09	807	7.29e-08	10	Genes in module_55	www.broad.mit.e...
Broad module_75	View Gene Set	6.02e-09	391	2.278e-07	11	Genes in module_75	www.broad.mit.e...
Broad module_118	View Gene Set	5.978e-09	393	2.278e-07	11	Genes in module_118	www.broad.mit.e...
Broad module_53	View Gene Set	9.562e-09	389	3.339e-07	13	Genes in module_53	www.broad.mit.e...
Broad module_66	View Gene Set	2.37e-08	530	7.684e-07	14	Genes in module_66	www.broad.mit.e...
Broad module_100	View Gene Set	4.312e-08	523	1.305e-06	15	Genes in module_100	www.broad.mit.e...
Broad module_137	View Gene Set	7.091e-08	525	2.012e-06	16	Genes in module_137	www.broad.mit.e...
Broad module_403	View Gene Set	8.657e-08	44	2.312e-06	17	Genes in module_403	www.broad.mit.e...
Broad module_11	View Gene Set	3.138e-07	520	7.916e-06	18	Genes in module_11	www.broad.mit.e...
Broad module_361	View Gene Set	8.38e-07	136	2.002e-05	19	Genes in module_361	www.broad.mit.e...
Broad module_47	View Gene Set	1.071e-06	216	2.431e-05	20	Genes in module_47	www.broad.mit.e...
Broad module_2	View Gene Set	1.548e-06	373	3.078e-05	21	Genes in module_2	www.broad.mit.e...
Broad module_27	View Gene Set	1.545e-06	345	3.078e-05	21	Genes in module_27	www.broad.mit.e...
Broad module_45	View Gene Set	1.559e-06	563	3.078e-05	21	Genes in module_45	www.broad.mit.e...
Broad module_342	View Gene Set	2.477e-06	195	4.685e-05	24	Genes in module_342	www.broad.mit.e...
Broad module_220	View Gene Set	3.198e-06	328	5.808e-05	25	Genes in module_220	www.broad.mit.e...
Broad module_301	View Gene Set	4.702e-06	144	8.21e-05	26	Genes in module_301	www.broad.mit.e...
Broad module_12	View Gene Set	6.35e-06	346	0.0001068	27	Genes in module_12	www.broad.mit.e...
Broad module_171	View Gene Set	8.284e-06	131	0.0001343	28	Genes in module_171	www.broad.mit.e...
Broad module_24	View Gene Set	9.292e-06	443	0.0001455	29	Genes in module_24	www.broad.mit.e...
Broad module_1	View Gene Set	1.15e-05	355	0.000174	30	Genes in module_1	www.broad.mit.e...
Broad module_5	View Gene Set	1.257e-05	420	0.000184	31	Genes in module_5	www.broad.mit.e...
Broad module_238	View Gene Set	1.317e-05	150	0.0001868	32	Genes in module_238	www.broad.mit.e...
Broad module_198	View Gene Set	1.46e-05	288	0.0002008	33	Genes in module_198	www.broad.mit.e...
Broad module_6	View Gene Set	1.715e-05	403	0.0002228	34	Genes in module_6	www.broad.mit.e...
Broad module_92	View Gene Set	1.717e-05	146	0.0002228	34	Genes in module_92	www.broad.mit.e...
Broad module_188	View Gene Set	1.964e-05	130	0.0002476	36	Genes in module_188	www.broad.mit.e...
Broad module_112	View Gene Set	2.514e-05	255	0.0003085	37	Genes in module_112	www.broad.mit.e...
Broad module_345	View Gene Set	2.737e-05	118	0.000327	38	Genes in module_345	www.broad.mit.e...
Broad module_145	View Gene Set	2.851e-05	106	0.0003319	39	Genes in module_145	www.broad.mit.e...
Broad module_99	View Gene Set	3.495e-05	346	0.0003806	40	Genes in module_99	www.broad.mit.e...
Broad module_129	View Gene Set	3.452e-05	215	0.0003806	40	Genes in module_129	www.broad.mit.e...
Broad module_292	View Gene Set	3.521e-05	129	0.0003806	40	Genes in module_292	www.broad.mit.e...
Broad module_52	View Gene Set	3.994e-05	415	0.0004217	43	Genes in module_52	www.broad.mit.e...
Broad module_324	View Gene Set	5.424e-05	131	0.0005597	44	Genes in module_324	www.broad.mit.e...
Broad module_44	View Gene Set	7.034e-05	319	0.0007097	45	Genes in module_44	www.broad.mit.e...
Broad module_176	View Gene Set	9.112e-05	225	0.0008994	46	Genes in module_176	www.broad.mit.e...
Broad module_252	View Gene Set	9.983e-05	224	0.0009643	47	Genes in module_252	www.broad.mit.e...
Broad module_122	View Gene Set	0.0001575	138	0.001489	48	Genes in module_122	www.broad.mit.e...
Broad module_436	View Gene Set	0.0002095	129	0.001941	49	Genes in module_436	www.broad.mit.e...
Broad module_38	View Gene Set	0.0002976	453	0.002702	50	Genes in module_38	www.broad.mit.e...
Broad module_208	View Gene Set	0.0003602	118	0.003207	51	Genes in module_208	www.broad.mit.e...
Broad module_164	View Gene Set	0.0004051	61	0.003537	52	Genes in module_164	www.broad.mit.e...
Broad module_488	View Gene Set	0.0004403	28	0.003772	53	Genes in module_488	www.broad.mit.e...
Broad module_73	View Gene Set	0.0006119	21	0.005051	54	Genes in module_73	www.broad.mit.e...
Broad module_433	View Gene Set	0.0006118	60	0.005051	54	Genes in module_433	www.broad.mit.e...
Broad module_76	View Gene Set	0.0006274	79	0.005086	56	Genes in module_76	www.broad.mit.e...
Broad module_95	View Gene Set	0.0007592	490	0.006047	57	Genes in module_95	www.broad.mit.e...
Broad module_18	View Gene Set	0.0007819	434	0.006121	58	Genes in module_18	www.broad.mit.e...
Broad module_163	View Gene Set	0.0008219	495	0.006324	59	Genes in module_163	www.broad.mit.e...
Broad module_240	View Gene Set	0.001209	17	0.009151	60	Genes in module_240	www.broad.mit.e...
Broad module_204	View Gene Set	0.001248	82	0.009288	61	Genes in module_204	www.broad.mit.e...
Broad module_23	View Gene Set	0.00131	552	0.009443	62	Genes in module_23	www.broad.mit.e...
Broad module_223	View Gene Set	0.001293	140	0.009443	62	Genes in module_223	www.broad.mit.e...
Broad module_165	View Gene Set	0.001381	78	0.009797	64	Genes in module_165	www.broad.mit.e...
Broad module_253	View Gene Set	0.001708	21	0.01193	65	Genes in module_253	www.broad.mit.e...
Broad module_121	View Gene Set	0.00204	98	0.01404	66	Genes in module_121	www.broad.mit.e...
Broad module_207	View Gene Set	0.002596	195	0.01759	67	Genes in module_207	www.broad.mit.e...
Broad module_180	View Gene Set	0.002716	113	0.01813	68	Genes in module_180	www.broad.mit.e...
Broad module_313	View Gene Set	0.002886	16	0.01872	69	Genes in module_313	www.broad.mit.e...
Broad module_547	View Gene Set	0.002878	14	0.01872	69	Genes in module_547	www.broad.mit.e...
Broad module_146	View Gene Set	0.003195	92	0.02043	71	Genes in module_146	www.broad.mit.e...
Broad module_263	View Gene Set	0.003463	43	0.02183	72	Genes in module_263	www.broad.mit.e...
Broad module_196	View Gene Set	0.003783	23	0.02353	73	Genes in module_196	www.broad.mit.e...
Broad module_33	View Gene Set	0.004445	369	0.02698	74	Genes in module_33	www.broad.mit.e...
Broad module_63	View Gene Set	0.004458	210	0.02698	74	Genes in module_63	www.broad.mit.e...
Broad module_19	View Gene Set	0.004807	306	0.02872	76	Genes in module_19	www.broad.mit.e...
Broad module_98	View Gene Set	0.00489	375	0.02883	77	Genes in module_98	www.broad.mit.e...
Broad module_545	View Gene Set	0.005166	19	0.03007	78	Genes in module_545	www.broad.mit.e...
Broad module_573	View Gene Set	0.005323	24	0.03059	79	Genes in module_573	www.broad.mit.e...
Broad module_156	View Gene Set	0.005557	18	0.03154	80	Genes in module_156	www.broad.mit.e...
Broad module_275	View Gene Set	0.005772	16	0.03235	81	Genes in module_275	www.broad.mit.e...
Broad module_481	View Gene Set	0.005964	81	0.03302	82	Genes in module_481	www.broad.mit.e...
Broad module_544	View Gene Set	0.006085	80	0.03328	83	Genes in module_544	www.broad.mit.e...
Broad module_274	View Gene Set	0.006308	82	0.03409	84	Genes in module_274	www.broad.mit.e...
Broad module_283	View Gene Set	0.006792	7	0.03544	85	Genes in module_283	www.broad.mit.e...
Broad module_289	View Gene Set	0.006746	118	0.03544	85	Genes in module_289	www.broad.mit.e...
Broad module_297	View Gene Set	0.006781	78	0.03544	85	Genes in module_297	www.broad.mit.e...
Broad module_357	View Gene Set	0.007102	78	0.03664	88	Genes in module_357	www.broad.mit.e...
Broad module_265	View Gene Set	0.007561	27	0.03857	89	Genes in module_265	www.broad.mit.e...
Broad module_390	View Gene Set	0.007985	8	0.04028	90	Genes in module_390	www.broad.mit.e...
Broad module_496	View Gene Set	0.008695	6	0.04338	91	Genes in module_496	www.broad.mit.e...
Broad module_389	View Gene Set	0.009625	182	0.0475	92	Genes in module_389	www.broad.mit.e...
Broad module_41	View Gene Set	0.01002	542	0.04839	93	Genes in module_41	www.broad.mit.e...
Broad module_181	View Gene Set	0.009944	292	0.04839	93	Genes in module_181	www.broad.mit.e...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Broad IMMUNE_SYSTEM_PROCESS	View Gene Set	1.637e-07	326	0.0001351	1	Genes annotated by the GO term GO:0002376. Any process involved in the development or functioning of the immune system an organismal system for calibrated responses to potential internal or invasive threats.	www.broad.mit.e...
Broad DEFENSE_RESPONSE	View Gene Set	1.558e-06	264	0.0006425	2	Genes annotated by the GO term GO:0006952. Reactions triggered in response to the presence of a foreign body or the occurrence of an injury which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.	www.broad.mit.e...
Broad MULTICELLULAR_ORGANISMAL_DEVELOPMENT	View Gene Set	5.558e-06	1037	0.001436	3	Genes annotated by the GO term GO:0007275. The biological process whose specific outcome is the progression of an organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).	www.broad.mit.e...
Broad IMMUNE_RESPONSE	View Gene Set	6.963e-06	232	0.001436	3	Genes annotated by the GO term GO:0006955. Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat.	www.broad.mit.e...
Broad CELL_SURFACE_RECEPTOR_LINKED_SIGNAL_TRANSDUCTION_GO_0007166	View Gene Set	2.89e-05	620	0.004768	5	Genes annotated by the GO term GO:0007166. Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell.	www.broad.mit.e...
Broad CELL_CYCLE_PHASE	View Gene Set	0.0002158	167	0.02781	6	Genes annotated by the GO term GO:0022403. A cell cycle process comprising the steps by which a cell progresses through one of the biochemical and morphological phases and events that occur during successive cell replication or nuclear replication events.	www.broad.mit.e...
Broad CELL_PROLIFERATION_GO_0008283	View Gene Set	0.000236	501	0.02781	6	Genes annotated by the GO term GO:0008283. The multiplication or reproduction of cells resulting in the expansion of a cell population.	www.broad.mit.e...
Broad CELL_CYCLE_GO_0007049	View Gene Set	0.0003254	304	0.03148	8	Genes annotated by the GO term GO:0007049. The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division.	www.broad.mit.e...
Broad G_PROTEIN_COUPLED_RECEPTOR_PROTEIN_SIGNALING_PATHWAY	View Gene Set	0.0003434	326	0.03148	8	Genes annotated by the GO term GO:0007186. The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand.	www.broad.mit.e...
Broad SIGNAL_TRANSDUCTION	View Gene Set	0.000411	1597	0.03325	10	Genes annotated by the GO term GO:0007165. The cascade of processes by which a signal interacts with a receptor causing a change in the level or activity of a second messenger or other downstream target and ultimately effecting a change in the functioning of the cell.	www.broad.mit.e...
Broad CELL_CYCLE_PROCESS	View Gene Set	0.0004434	187	0.03325	10	Genes annotated by the GO term GO:0022402. A cellular process that is involved in the progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events.	www.broad.mit.e...
Broad INFLAMMATORY_RESPONSE	View Gene Set	0.0004959	124	0.03409	12	Genes annotated by the GO term GO:0006954. The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages.	www.broad.mit.e...
Broad M_PHASE	View Gene Set	0.0005687	111	0.03609	13	Genes annotated by the GO term GO:0000279. Progression through M phase the part of the cell cycle comprising nuclear division.	www.broad.mit.e...
Broad REGULATION_OF_SECRETION	View Gene Set	0.0006693	40	0.03693	14	Genes annotated by the GO term GO:0051046. Any process that modulates the frequency rate or extent of the regulated release of a substance from a cell or group of cells.	www.broad.mit.e...
Broad SYSTEM_DEVELOPMENT	View Gene Set	0.0006914	853	0.03693	14	Genes annotated by the GO term GO:0048731. The process whose specific outcome is the progression of an organismal system over time from its formation to the mature structure. A system is a regularly interacting or interdependent group of organs or tissues that work together to carry out a given biological process.	www.broad.mit.e...
Broad ORGAN_DEVELOPMENT	View Gene Set	0.0007162	567	0.03693	14	Genes annotated by the GO term GO:0048513. Development of a tissue or tissues that work together to perform a specific function or functions. Development pertains to the process whose specific outcome is the progression of a structure over time from its formation to the mature structure. Organs are commonly observed as visibly distinct structures but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions.	www.broad.mit.e...
Broad NEGATIVE_REGULATION_OF_BIOLOGICAL_PROCESS	View Gene Set	0.0009057	659	0.04395	17	Genes annotated by the GO term GO:0048519. Any process that stops prevents or reduces the frequency rate or extent of a biological process. Biological processes are regulated by many means; examples include the control of gene expression protein modification or interaction with a protein or substrate molecule.	www.broad.mit.e...
Broad MITOTIC_SISTER_CHROMATID_SEGREGATION	View Gene Set	0.00103	16	0.0444	18	Genes annotated by the GO term GO:0000070. The cell cycle process whereby replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the mitotic cell cycle. Each replicated chromosome composed of two sister chromatids aligns at the cell equator paired with its homologous partner. One homolog of each morphologic type goes into each of the resulting chromosome sets.	www.broad.mit.e...
Broad MITOTIC_CELL_CYCLE	View Gene Set	0.001076	148	0.0444	18	Genes annotated by the GO term GO:0000278. Progression through the phases of the mitotic cell cycle the most common eukaryotic cell cycle which canonically comprises four successive phases called G1 S G2 and M and includes replication of the genome and the subsequent segregation of chromosomes into daughter cells. In some variant cell cycles nuclear replication or nuclear division may not be followed by cell division or G1 and G2 phases may be absent.	www.broad.mit.e...
Broad REGULATION_OF_CELL_PROLIFERATION	View Gene Set	0.0009977	299	0.0444	18	Genes annotated by the GO term GO:0042127. Any process that modulates the frequency rate or extent of cell proliferation.	www.broad.mit.e...
Broad CELL_CELL_SIGNALING	View Gene Set	0.001153	400	0.04445	21	Genes annotated by the GO term GO:0007267. Any process that mediates the transfer of information from one cell to another.	www.broad.mit.e...
Broad MONOVALENT_INORGANIC_CATION_TRANSPORT	View Gene Set	0.001185	92	0.04445	21	Genes annotated by the GO term GO:0015672. The directed movement of inorganic cations with a valency of one into out of within or between cells. Inorganic cations are atoms or small molecules with a positive charge which do not contain carbon in covalent linkage.	www.broad.mit.e...
Broad RESPONSE_TO_EXTERNAL_STIMULUS	View Gene Set	0.001555	305	0.04702	23	Genes annotated by the GO term GO:0009605. A change in state or activity of a cell or an organism (in terms of movement secretion enzyme production gene expression etc.) as a result of an external stimulus.	www.broad.mit.e...
Broad CATION_TRANSPORT	View Gene Set	0.001523	145	0.04702	23	Genes annotated by the GO term GO:0006812. The directed movement of cations atoms or small molecules with a net positive charge into out of within or between cells.	www.broad.mit.e...
Broad SISTER_CHROMATID_SEGREGATION	View Gene Set	0.001596	17	0.04702	23	Genes annotated by the GO term GO:0000819. The process by which sister chromatids are organized and then physically separated and apportioned to two or more sets.	www.broad.mit.e...
Broad RESPONSE_TO_WOUNDING	View Gene Set	0.001552	184	0.04702	23	Genes annotated by the GO term GO:0009611. A change in state or activity of a cell or an organism (in terms of movement secretion enzyme production gene expression etc.) as a result of a stimulus indicating damage to the organism.	www.broad.mit.e...
Broad POSITIVE_REGULATION_OF_SECRETION	View Gene Set	0.001516	20	0.04702	23	Genes annotated by the GO term GO:0051047. Any process that activates or increases the frequency rate or extent of the regulated release of a substance from a cell or group of cells.	www.broad.mit.e...
Broad REGULATION_OF_IMMUNE_SYSTEM_PROCESS	View Gene Set	0.00154	67	0.04702	23	Genes annotated by the GO term GO:0002682. Any process that modulates the frequency rate or extent of an immune system process.	www.broad.mit.e...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Broad PLASMA_MEMBRANE_PART	View Gene Set	2.476e-09	1142	5.77e-07	1	Genes annotated by the GO term GO:0044459. Any constituent part of the plasma membrane the membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.	www.broad.mit.e...
Broad PLASMA_MEMBRANE	View Gene Set	5.344e-09	1392	6.226e-07	2	Genes annotated by the GO term GO:0005886. The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.	www.broad.mit.e...
Broad INTRINSIC_TO_PLASMA_MEMBRANE	View Gene Set	1.613e-08	978	1.085e-06	3	Genes annotated by the GO term GO:0031226. Located in the plasma membrane such that some covalently attached portion of the gene product for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor spans or is embedded in one or both leaflets of the membrane.	www.broad.mit.e...
Broad INTEGRAL_TO_PLASMA_MEMBRANE	View Gene Set	1.863e-08	964	1.085e-06	3	Genes annotated by the GO term GO:0005887. Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer.	www.broad.mit.e...
Broad REPLICATION_FORK	View Gene Set	7.626e-06	18	0.0003554	5	Genes annotated by the GO term GO:0005657. The Y-shaped region of a replicating DNA molecule resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes.	www.broad.mit.e...
Broad CHROMOSOMAL_PART	View Gene Set	2.235e-05	95	0.000868	6	Genes annotated by the GO term GO:0044427. Any constituent part of a chromosome a structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information.	www.broad.mit.e...
Broad CHROMOSOME	View Gene Set	8.925e-05	122	0.002971	7	Genes annotated by the GO term GO:0005694. A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information.	www.broad.mit.e...
Broad EXTRACELLULAR_REGION_PART	View Gene Set	0.0001144	331	0.003331	8	Genes annotated by the GO term GO:0044421. Any constituent part of the extracellular region the space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers constituent parts of the host cell environment outside an intracellular parasite.	www.broad.mit.e...
Broad EXTRACELLULAR_REGION	View Gene Set	0.0001989	437	0.005151	9	Genes annotated by the GO term GO:0005576. The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.	www.broad.mit.e...
Broad INTRINSIC_TO_MEMBRANE	View Gene Set	0.0002623	1319	0.005697	10	Genes annotated by the GO term GO:0031224. Located in a membrane such that some covalently attached portion of the gene product for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor spans or is embedded in one or both leaflets of the membrane.	www.broad.mit.e...
Broad INTEGRAL_TO_MEMBRANE	View Gene Set	0.000269	1301	0.005697	10	Genes annotated by the GO term GO:0016021. Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein indicates that all or part of the peptide sequence is embedded in the membrane.	www.broad.mit.e...
Broad EXTRACELLULAR_MATRIX_PART	View Gene Set	0.0007305	57	0.01418	12	Genes annotated by the GO term GO:0044420. Any constituent part of the extracellular matrix the structure lying external to one or more cells which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as often seen in plants).	www.broad.mit.e...
Broad BASEMENT_MEMBRANE	View Gene Set	0.001715	37	0.03075	13	Genes annotated by the GO term GO:0005604. A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers.	www.broad.mit.e...
Broad PROTEINACEOUS_EXTRACELLULAR_MATRIX	View Gene Set	0.002015	98	0.03353	14	Genes annotated by the GO term GO:0005578. A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity.	www.broad.mit.e...
Broad EXTRACELLULAR_SPACE	View Gene Set	0.002406	239	0.03738	15	Genes annotated by the GO term GO:0005615. That part of a multicellular organism outside the cells proper usually taken to be outside the plasma membranes and occupied by fluid.	www.broad.mit.e...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Broad RECEPTOR_ACTIVITY	View Gene Set	4.261e-05	572	0.006859	1	Genes annotated by the GO term GO:0004872. Combining with an extracellular or intracellular messenger to initiate a change in cell activity.	www.broad.mit.e...
Broad TRANSMEMBRANE_RECEPTOR_ACTIVITY	View Gene Set	2.034e-05	411	0.006859	1	Genes annotated by the GO term GO:0004888. Combining with an extracellular or intracellular messenger to initiate a change in cell activity and spanning to the membrane of either the cell or an organelle.	www.broad.mit.e...
Broad GROWTH_FACTOR_ACTIVITY	View Gene Set	5.196e-05	54	0.006859	1	Genes annotated by the GO term GO:0008083. The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation.	www.broad.mit.e...
Broad RECEPTOR_BINDING	View Gene Set	0.0002143	373	0.02122	4	Genes annotated by the GO term GO:0005102. Interacting selectively with one or more specific sites on a receptor molecule a macromolecule that undergoes combination with a hormone neurotransmitter drug or intracellular messenger to initiate a change in cell function.	www.broad.mit.e...
Broad ION_TRANSMEMBRANE_TRANSPORTER_ACTIVITY	View Gene Set	0.0004118	275	0.03262	5	Genes annotated by the GO term GO:0015075. Catalysis of the transfer of an ion from one side of a membrane to the other.	www.broad.mit.e...
Broad GATED_CHANNEL_ACTIVITY	View Gene Set	0.0005406	121	0.03568	6	Genes annotated by the GO term GO:0022836. Catalysis of the transmembrane transfer of a solute by a channel that opens in response to a specific stimulus.	www.broad.mit.e...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
PMID 20237496	View Gene Set	3.07e-08	828	7.698e-05	1	New genetic associations detected in a host response study to hepatitis B vaccine.	www.ncbi.nlm.ni...
PMID 12791985	View Gene Set	6.182e-07	37	0.000775	2	Sensing DNA damage through ATRIP recognition of RPA-ssDNA complexes.	www.ncbi.nlm.ni...
PMID 20453000	View Gene Set	1.723e-06	351	0.00144	3	A Large-scale genetic association study of esophageal adenocarcinoma risk.	www.ncbi.nlm.ni...
PMID 19690177	View Gene Set	2.8e-06	31	0.001755	4	Polymorphic variants in hereditary pancreatic cancer genes are not associated with pancreatic cancer risk.	www.ncbi.nlm.ni...
PMID 15232106	View Gene Set	4.23e-06	30	0.002121	5	Self-assembling protein microarrays.	www.ncbi.nlm.ni...
PMID 19584272	View Gene Set	1.139e-05	11	0.004668	6	Modification of ovarian cancer risk by BRCA1/2-interacting genes in a multicenter cohort of BRCA1/2 mutation carriers.	www.ncbi.nlm.ni...
PMID 9822671	View Gene Set	1.303e-05	10	0.004668	6	Replication factor C disengages from proliferating cell nuclear antigen (PCNA) upon sliding clamp formation and PCNA itself tethers DNA polymerase delta to DNA.	www.ncbi.nlm.ni...
PMID 18270339	View Gene Set	1.712e-05	57	0.005366	8	Comprehensive analysis of DNA repair gene variants and risk of meningioma.	www.ncbi.nlm.ni...
PMID 17703412	View Gene Set	2.019e-05	207	0.005623	9	Genetic susceptibility to respiratory syncytial virus bronchiolitis is predominantly associated with innate immune genes.	www.ncbi.nlm.ni...
PMID 19258923	View Gene Set	2.348e-05	205	0.005885	10	Genetic susceptibility to respiratory syncytial virus bronchiolitis in preterm children is associated with airway remodeling genes and innate immune genes.	www.ncbi.nlm.ni...
PMID 20503287	View Gene Set	2.589e-05	205	0.0059	11	Interleukin-9 polymorphism in infants with respiratory syncytial virus infection: an opposite effect in boys and girls.	www.ncbi.nlm.ni...
PMID 19578796	View Gene Set	2.912e-05	152	0.006084	12	Association of genetic variants with chronic kidney disease in individuals with different lipid profiles.	www.ncbi.nlm.ni...
PMID 19573080	View Gene Set	3.869e-05	145	0.007462	13	Common genetic variants in candidate genes and risk of familial lymphoid malignancies.	www.ncbi.nlm.ni...
PMID 12539042	View Gene Set	7.474e-05	45	0.01338	14	HIV-1 Tat reprograms immature dendritic cells to express chemoattractants for activated T cells and macrophages.	www.ncbi.nlm.ni...
PMID 19064572	View Gene Set	8.207e-05	170	0.01372	15	Polymorphism in the IL18 gene and epithelial ovarian cancer in non-Hispanic white women.	www.ncbi.nlm.ni...
PMID 19453261	View Gene Set	0.0001276	383	0.01881	16	High-density association study of 383 candidate genes for volumetric BMD at the femoral neck and lumbar spine among older men.	www.ncbi.nlm.ni...
PMID 9111189	View Gene Set	0.0001256	16	0.01881	16	Which DNA polymerases are used for DNA-repair in eukaryotes?	www.ncbi.nlm.ni...
PMID 20424473	View Gene Set	0.0001509	146	0.02101	18	L-type voltage-dependent calcium channel alpha subunit 1C is a novel candidate gene associated with secondary hyperparathyroidism: an application of haplotype-based analysis for multiple linked single nucleotide polymorphisms.	www.ncbi.nlm.ni...
PMID 19789190	View Gene Set	0.0001836	121	0.02422	19	A gene-based risk score for lung cancer susceptibility in smokers and ex-smokers.	www.ncbi.nlm.ni...
PMID 18240029	View Gene Set	0.0002339	203	0.02932	20	Reviews in molecular biology and biotechnology: transmembrane signaling by G protein-coupled receptors.	www.ncbi.nlm.ni...
PMID 15226314	View Gene Set	0.0002604	20	0.03108	21	Human claspin is a ring-shaped DNA-binding protein with high affinity to branched DNA structures.	www.ncbi.nlm.ni...
PMID 19956635	View Gene Set	0.0003167	108	0.03609	22	Fulfilling the promise of personalized medicine? Systematic review and field synopsis of pharmacogenetic studies.	www.ncbi.nlm.ni...
PMID 15707391	View Gene Set	0.0003479	23	0.03634	23	DNA-dependent phosphorylation of Chk1 and Claspin in a human cell-free system.	www.ncbi.nlm.ni...
PMID 19240061	View Gene Set	0.0003349	267	0.03634	23	Coeliac disease-associated risk variants in TNFAIP3 and REL implicate altered NF-kappaB signalling.	www.ncbi.nlm.ni...
PMID 19170196	View Gene Set	0.000417	384	0.03734	25	Polymorphisms in innate immunity genes and lung cancer risk in Xuanwei China.	www.ncbi.nlm.ni...
PMID 19625176	View Gene Set	0.0004148	376	0.03734	25	PTEN identified as important risk factor of chronic obstructive pulmonary disease.	www.ncbi.nlm.ni...
PMID 19692168	View Gene Set	0.0003737	422	0.03734	25	Genetic susceptibility to distinct bladder cancer subphenotypes.	www.ncbi.nlm.ni...
PMID 20347428	View Gene Set	0.0004019	14	0.03734	25	A histone-fold complex and FANCM form a conserved DNA-remodeling complex to maintain genome stability.	www.ncbi.nlm.ni...
PMID 15128046	View Gene Set	0.0005061	60	0.03965	29	Comparison of cytochrome P450 (CYP) genes from the mouse and human genomes including nomenclature recommendations for genes pseudogenes and alternative-splice variants.	www.ncbi.nlm.ni...
PMID 18676680	View Gene Set	0.0004613	381	0.03965	29	Pathway-based evaluation of 380 candidate genes and lung cancer susceptibility suggests the importance of the cell cycle pathway.	www.ncbi.nlm.ni...
PMID 19086053	View Gene Set	0.0004957	301	0.03965	29	Identification of new putative susceptibility genes for several psychiatric disorders by association analysis of regulatory and non-synonymous SNPs of 306 genes involved in neurotransmission and neurodevelopment.	www.ncbi.nlm.ni...
PMID 20452482	View Gene Set	0.0004765	188	0.03965	29	Identification of fetal and maternal single nucleotide polymorphisms in candidate genes that predispose to spontaneous preterm labor with intact membranes.	www.ncbi.nlm.ni...
PMID 19420105	View Gene Set	0.0005402	81	0.04104	33	A candidate gene approach to genetic prognostic factors of IgA nephropathy--a result of Polymorphism REsearch to DIstinguish genetic factors Contributing To progression of IgA Nephropathy (PREDICT-IgAN).	www.ncbi.nlm.ni...
PMID 18818748	View Gene Set	0.0006397	128	0.04455	34	Preterm birth in Caucasians is associated with coagulation and inflammation pathway gene variants.	www.ncbi.nlm.ni...
PMID 19527514	View Gene Set	0.0006397	128	0.04455	34	Racial disparity in pathophysiologic pathways of preterm birth based on genetic variants.	www.ncbi.nlm.ni...
PMID 8662825	View Gene Set	0.0006392	10	0.04455	34	Cyclin-dependent kinases are inactivated by a combination of p21 and Thr-14/Tyr-15 phosphorylation after UV-induced DNA damage.	www.ncbi.nlm.ni...
PMID 12973351	View Gene Set	0.0006618	12	0.04484	37	A novel ubiquitin ligase is deficient in Fanconi anemia.	www.ncbi.nlm.ni...
PMID 18794853	View Gene Set	0.0007341	23	0.04761	38	Common variants at CD40 and other loci confer risk of rheumatoid arthritis.	www.ncbi.nlm.ni...
PMID 19305409	View Gene Set	0.0007407	19	0.04761	38	Common variants at ten loci modulate the QT interval duration in the QTSCD Study.	www.ncbi.nlm.ni...
PMID 18498634	View Gene Set	0.0008113	10	0.04948	40	The genetic susceptibility to type 2 diabetes may be modulated by obesity status: implications for association studies.	www.ncbi.nlm.ni...
PMID 18649358	View Gene Set	0.0007903	27	0.04948	40	Replication of a genome-wide case-control study of esophageal squamous cell carcinoma.	www.ncbi.nlm.ni...
PMID 18950845	View Gene Set	0.0008289	88	0.04948	40	Evaluating new candidate SNPs as low penetrance risk factors in sporadic breast cancer: a two-stage Spanish case-control study.	www.ncbi.nlm.ni...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null PS50835	View Gene Set	1.944e-05	658	0.01429	1	IG_LIKE	expasy.org/pros...
Null PS50262	View Gene Set	0.000106	765	0.03896	2	G_PROTEIN_RECEP_F1_2	expasy.org/pros...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null BARD1 signaling events	View Gene Set	0.000123	29	0.01144	1	NCI_NATURE - BARD1 signaling events gene set	www.pathwaycomm...
Null Direct p53 effectors	View Gene Set	8.283e-05	139	0.01144	1	NCI_NATURE - Direct p53 effectors gene set	www.pathwaycomm...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null DNA strand elongation	View Gene Set	1.404e-08	31	1.568e-05	1	REACTOME - DNA strand elongation gene set	www.pathwaycomm...
Null G2/M Checkpoints	View Gene Set	1.257e-07	43	7.018e-05	2	REACTOME - G2/M Checkpoints gene set	www.pathwaycomm...
Null Interferon Signaling	View Gene Set	2.56e-07	86	9.531e-05	3	REACTOME - Interferon Signaling gene set	www.pathwaycomm...
Null Interferon alpha/beta signaling	View Gene Set	7.091e-07	65	0.0001584	4	REACTOME - Interferon alpha/beta signaling gene set	www.pathwaycomm...
Null Activation of ATR in response to replication stress	View Gene Set	6.182e-07	37	0.0001584	4	REACTOME - Activation of ATR in response to replication stress gene set	www.pathwaycomm...
Null Telomere C-strand (Lagging Strand) Synthesis	View Gene Set	1.462e-06	22	0.0002721	6	REACTOME - Telomere C-strand (Lagging Strand) Synthesis gene set	www.pathwaycomm...
Null Activation of the pre-replicative complex	View Gene Set	5.764e-06	30	0.0008897	7	REACTOME - Activation of the pre-replicative complex gene set	www.pathwaycomm...
Null Lagging Strand Synthesis	View Gene Set	6.372e-06	20	0.0008897	7	REACTOME - Lagging Strand Synthesis gene set	www.pathwaycomm...
Null Polymerase switching on the C-strand of the telomere	View Gene Set	2.375e-05	14	0.002211	9	REACTOME - Polymerase switching on the C-strand of the telomere gene set	www.pathwaycomm...
Null G2/M DNA damage checkpoint	View Gene Set	2.307e-05	29	0.002211	9	REACTOME - G2/M DNA damage checkpoint gene set	www.pathwaycomm...
Null Polymerase switching	View Gene Set	2.375e-05	14	0.002211	9	REACTOME - Polymerase switching gene set	www.pathwaycomm...
Null Leading Strand Synthesis	View Gene Set	2.375e-05	14	0.002211	9	REACTOME - Leading Strand Synthesis gene set	www.pathwaycomm...
Null Interferon gamma signaling	View Gene Set	8.524e-05	48	0.007324	13	REACTOME - Interferon gamma signaling gene set	www.pathwaycomm...
Null Gap-filling DNA repair synthesis and ligation in TC-NER	View Gene Set	0.0001256	16	0.007384	14	REACTOME - Gap-filling DNA repair synthesis and ligation in TC-NER gene set	www.pathwaycomm...
Null Gap-filling DNA repair synthesis and ligation in GG-NER	View Gene Set	0.0001256	16	0.007384	14	REACTOME - Gap-filling DNA repair synthesis and ligation in GG-NER gene set	www.pathwaycomm...
Null E2F mediated regulation of DNA replication	View Gene Set	0.0001043	28	0.007384	14	REACTOME - E2F mediated regulation of DNA replication gene set	www.pathwaycomm...
Null Class A/1 (Rhodopsin-like receptors)	View Gene Set	0.0001233	277	0.007384	14	REACTOME - Class A/1 (Rhodopsin-like receptors) gene set	www.pathwaycomm...
Null GPCR ligand binding	View Gene Set	0.0001241	339	0.007384	14	REACTOME - GPCR ligand binding gene set	www.pathwaycomm...
Null Signaling by GPCR	View Gene Set	9.589e-05	802	0.007384	14	REACTOME - Signaling by GPCR gene set	www.pathwaycomm...
Null Extension of Telomeres	View Gene Set	0.000142	28	0.007932	20	REACTOME - Extension of Telomeres gene set	www.pathwaycomm...
Null G1/S-Specific Transcription	View Gene Set	0.0001818	16	0.009669	21	REACTOME - G1/S-Specific Transcription gene set	www.pathwaycomm...
Null Fanconi Anemia pathway	View Gene Set	0.000207	22	0.01051	22	REACTOME - Fanconi Anemia pathway gene set	www.pathwaycomm...
Null Repair synthesis for gap-filling by DNA polymerase in TC-NER	View Gene Set	0.000234	15	0.01089	23	REACTOME - Repair synthesis for gap-filling by DNA polymerase in TC-NER gene set	www.pathwaycomm...
Null Repair synthesis of patch ~27-30 bases long by DNA polymerase	View Gene Set	0.000234	15	0.01089	23	REACTOME - Repair synthesis of patch ~27-30 bases long by DNA polymerase gene set	www.pathwaycomm...
Null Unwinding of DNA	View Gene Set	0.0002901	11	0.01296	25	REACTOME - Unwinding of DNA gene set	www.pathwaycomm...
Null Cytochrome P450 - arranged by substrate type	View Gene Set	0.0003838	47	0.01649	26	REACTOME - Cytochrome P450 - arranged by substrate type gene set	www.pathwaycomm...
Null Processive synthesis on the lagging strand	View Gene Set	0.0005057	15	0.02092	27	REACTOME - Processive synthesis on the lagging strand gene set	www.pathwaycomm...
Null Biological oxidations	View Gene Set	0.0006134	94	0.02447	28	REACTOME - Biological oxidations gene set	www.pathwaycomm...
Null Telomere C-strand synthesis initiation	View Gene Set	0.0008169	6	0.03042	29	REACTOME - Telomere C-strand synthesis initiation gene set	www.pathwaycomm...
Null DNA replication initiation	View Gene Set	0.0008169	6	0.03042	29	REACTOME - DNA replication initiation gene set	www.pathwaycomm...
Null Chk1/Chk2(Cds1) mediated inactivation of Cyclin B:Cdk1 complex	View Gene Set	0.0009556	6	0.03336	31	REACTOME - Chk1/Chk2(Cds1) mediated inactivation of Cyclin B:Cdk1 complex gene set	www.pathwaycomm...
Null Removal of the Flap Intermediate	View Gene Set	0.000935	14	0.03336	31	REACTOME - Removal of the Flap Intermediate gene set	www.pathwaycomm...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null hsa-miR-613	View Gene Set	6.378e-26	1335	4.318e-23	1	microRNA targets for hsa-miR-613 from miranda.targets	www.mirbase.org...
Null hsa-miR-206	View Gene Set	1.687e-23	1605	5.709e-21	2	microRNA targets for hsa-miR-206 from miranda.targets	www.mirbase.org...
Null hsa-miR-1	View Gene Set	1.592e-19	1772	3.593e-17	3	microRNA targets for hsa-miR-1 from miranda.targets	www.mirbase.org...
Null hsa-miR-19a	View Gene Set	1.953e-05	2189	0.003306	4	microRNA targets for hsa-miR-19a from miranda.targets	www.mirbase.org...
Null hsa-miR-122	View Gene Set	2.962e-05	1028	0.004011	5	microRNA targets for hsa-miR-122 from miranda.targets	www.mirbase.org...
Null hsa-miR-190	View Gene Set	0.0002514	1773	0.02836	6	microRNA targets for hsa-miR-190 from miranda.targets	www.mirbase.org...
Null hsa-miR-1246	View Gene Set	0.0004605	1219	0.0308	7	microRNA targets for hsa-miR-1246 from miranda.targets	www.mirbase.org...
Null hsa-miR-19b	View Gene Set	0.0004903	2017	0.0308	7	microRNA targets for hsa-miR-19b from miranda.targets	www.mirbase.org...
Null hsa-miR-373	View Gene Set	0.0004676	2061	0.0308	7	microRNA targets for hsa-miR-373 from miranda.targets	www.mirbase.org...
Null hsa-miR-573	View Gene Set	0.0005005	2023	0.0308	7	microRNA targets for hsa-miR-573 from miranda.targets	www.mirbase.org...
Null hsa-miR-93	View Gene Set	0.0003622	2077	0.0308	7	microRNA targets for hsa-miR-93 from miranda.targets	www.mirbase.org...
Null hsa-miR-520b	View Gene Set	0.0006221	1700	0.0351	12	microRNA targets for hsa-miR-520b from miranda.targets	www.mirbase.org...
Null hsa-miR-509-3p	View Gene Set	0.0008046	711	0.0419	13	microRNA targets for hsa-miR-509-3p from miranda.targets	www.mirbase.org...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null hsa-miR-1	View Gene Set	2.441e-15	659	1.736e-12	1	microRNA targets for hsa-miR-1 from mirbase.targets	www.mirbase.org...
Null hsa-miR-206	View Gene Set	1.898e-14	683	6.749e-12	2	microRNA targets for hsa-miR-206 from mirbase.targets	www.mirbase.org...
Null hsa-miR-613	View Gene Set	3.543e-13	707	8.398e-11	3	microRNA targets for hsa-miR-613 from mirbase.targets	www.mirbase.org...
Null hsa-miR-122	View Gene Set	0.0001428	695	0.02538	4	microRNA targets for hsa-miR-122 from mirbase.targets	www.mirbase.org...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null hsa-miR-206	View Gene Set	3.987e-39	358	2.205e-36	1	microRNA targets for hsa-miR-206 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-1	View Gene Set	2.175e-36	342	6.015e-34	2	microRNA targets for hsa-miR-1 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-613	View Gene Set	1.997e-28	322	3.681e-26	3	microRNA targets for hsa-miR-613 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-890	View Gene Set	0.0002949	234	0.04077	4	microRNA targets for hsa-miR-890 from mirtarget2.targets	www.mirbase.org...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null hsa-miR-206	View Gene Set	1.443e-33	404	2.569e-31	1	microRNA targets for hsa-miR-206 from pictar.targets	www.mirbase.org...
Null hsa-miR-1	View Gene Set	3.044e-33	408	2.709e-31	2	microRNA targets for hsa-miR-1 from pictar.targets	www.mirbase.org...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null hsa-miR-1	View Gene Set	1.548e-29	149	7.895e-28	1	microRNA targets for hsa-miR-1 from tarbase.targets	www.mirbase.org...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null hsa-miR-1	View Gene Set	1.051e-42	583	8.544e-41	1	microRNA targets for hsa-miR-1 from targetscan.targets	www.mirbase.org...
Null hsa-miR-206	View Gene Set	1.051e-42	583	8.544e-41	1	microRNA targets for hsa-miR-206 from targetscan.targets	www.mirbase.org...
Null hsa-miR-613	View Gene Set	1.051e-42	583	8.544e-41	1	microRNA targets for hsa-miR-613 from targetscan.targets	www.mirbase.org...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-206	View Gene Set	7.257e-23	135	1.491e-19	1	microRNA targets for miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-206 from miRNAtargetIntersection	www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-1	View Gene Set	3.688e-22	132	3.788e-19	2	microRNA targets for miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-1 from miRNAtargetIntersection	www.mirbase.org...
Null miranda.pictar.targetscan.targetsIntersection.hsa-miR-1	View Gene Set	1.26e-21	203	8.625e-19	3	microRNA targets for miranda.pictar.targetscan.targetsIntersection.hsa-miR-1 from miRNAtargetIntersection	www.mirbase.org...
Null miranda.pictar.targetscan.targetsIntersection.hsa-miR-206	View Gene Set	1.411e-20	198	7.245e-18	4	microRNA targets for miranda.pictar.targetscan.targetsIntersection.hsa-miR-206 from miRNAtargetIntersection	www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-613	View Gene Set	4.656e-19	116	1.66e-16	5	microRNA targets for miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-613 from miRNAtargetIntersection	www.mirbase.org...
Null mirtarget2.pictar.targetscan.targetsIntersection.hsa-miR-206	View Gene Set	4.848e-19	120	1.66e-16	5	microRNA targets for mirtarget2.pictar.targetscan.targetsIntersection.hsa-miR-206 from miRNAtargetIntersection	www.mirbase.org...
Null mirtarget2.pictar.targetscan.targetsIntersection.hsa-miR-1	View Gene Set	1.427e-17	113	4.188e-15	7	microRNA targets for mirtarget2.pictar.targetscan.targetsIntersection.hsa-miR-1 from miRNAtargetIntersection	www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-206	View Gene Set	6.452e-16	110	1.657e-13	8	microRNA targets for miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-206 from miRNAtargetIntersection	www.mirbase.org...
Null pictar.tarbase.targetscan.targetsIntersection.hsa-miR-1	View Gene Set	1.595e-15	47	3.641e-13	9	microRNA targets for pictar.tarbase.targetscan.targetsIntersection.hsa-miR-1 from miRNAtargetIntersection	www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-1	View Gene Set	1.922e-15	109	3.947e-13	10	microRNA targets for miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-1 from miRNAtargetIntersection	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-1	View Gene Set	2.698e-15	54	5.039e-13	11	microRNA targets for miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-1 from miRNAtargetIntersection	www.mirbase.org...
Null miranda.mirtarget2.tarbase.targetsIntersection.hsa-miR-1	View Gene Set	5.04e-15	34	8.627e-13	12	microRNA targets for miranda.mirtarget2.tarbase.targetsIntersection.hsa-miR-1 from miRNAtargetIntersection	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-206	View Gene Set	1.248e-14	50	1.971e-12	13	microRNA targets for miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-206 from miRNAtargetIntersection	www.mirbase.org...
Null miranda.tarbase.targetscan.targetsIntersection.hsa-miR-1	View Gene Set	1.553e-14	37	2.279e-12	14	microRNA targets for miranda.tarbase.targetscan.targetsIntersection.hsa-miR-1 from miRNAtargetIntersection	www.mirbase.org...
Null miranda.mirbase.targetscan.targetsIntersection.hsa-miR-1	View Gene Set	1.796e-14	64	2.459e-12	15	microRNA targets for miranda.mirbase.targetscan.targetsIntersection.hsa-miR-1 from miRNAtargetIntersection	www.mirbase.org...
Null miranda.pictar.tarbase.targetsIntersection.hsa-miR-1	View Gene Set	2.438e-13	35	2.945e-11	16	microRNA targets for miranda.pictar.tarbase.targetsIntersection.hsa-miR-1 from miRNAtargetIntersection	www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsIntersection.hsa-miR-206	View Gene Set	2.348e-13	36	2.945e-11	16	microRNA targets for mirbase.mirtarget2.pictar.targetsIntersection.hsa-miR-206 from miRNAtargetIntersection	www.mirbase.org...
Null mirbase.pictar.targetscan.targetsIntersection.hsa-miR-1	View Gene Set	4.527e-13	55	5.166e-11	18	microRNA targets for mirbase.pictar.targetscan.targetsIntersection.hsa-miR-1 from miRNAtargetIntersection	www.mirbase.org...
Null miranda.mirbase.pictar.targetsIntersection.hsa-miR-1	View Gene Set	9.86e-13	54	1.066e-10	19	microRNA targets for miranda.mirbase.pictar.targetsIntersection.hsa-miR-1 from miRNAtargetIntersection	www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsIntersection.hsa-miR-206	View Gene Set	1.3e-12	44	1.335e-10	20	microRNA targets for mirbase.mirtarget2.targetscan.targetsIntersection.hsa-miR-206 from miRNAtargetIntersection	www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsIntersection.hsa-miR-1	View Gene Set	2.492e-12	34	2.437e-10	21	microRNA targets for mirbase.mirtarget2.pictar.targetsIntersection.hsa-miR-1 from miRNAtargetIntersection	www.mirbase.org...
Null miranda.mirbase.pictar.targetsIntersection.hsa-miR-206	View Gene Set	4.69e-12	57	4.314e-10	22	microRNA targets for miranda.mirbase.pictar.targetsIntersection.hsa-miR-206 from miRNAtargetIntersection	www.mirbase.org...
Null mirbase.pictar.targetscan.targetsIntersection.hsa-miR-206	View Gene Set	4.83e-12	62	4.314e-10	22	microRNA targets for mirbase.pictar.targetscan.targetsIntersection.hsa-miR-206 from miRNAtargetIntersection	www.mirbase.org...
Null mirtarget2.pictar.tarbase.targetsIntersection.hsa-miR-1	View Gene Set	7.916e-12	34	6.775e-10	24	microRNA targets for mirtarget2.pictar.tarbase.targetsIntersection.hsa-miR-1 from miRNAtargetIntersection	www.mirbase.org...
Null miranda.mirbase.targetscan.targetsIntersection.hsa-miR-613	View Gene Set	1.267e-11	55	1.041e-09	25	microRNA targets for miranda.mirbase.targetscan.targetsIntersection.hsa-miR-613 from miRNAtargetIntersection	www.mirbase.org...
Null miranda.mirbase.targetscan.targetsIntersection.hsa-miR-206	View Gene Set	1.931e-11	68	1.525e-09	26	microRNA targets for miranda.mirbase.targetscan.targetsIntersection.hsa-miR-206 from miRNAtargetIntersection	www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsIntersection.hsa-miR-1	View Gene Set	2.371e-11	39	1.804e-09	27	microRNA targets for mirbase.mirtarget2.targetscan.targetsIntersection.hsa-miR-1 from miRNAtargetIntersection	www.mirbase.org...
Null mirtarget2.tarbase.targetscan.targetsIntersection.hsa-miR-1	View Gene Set	2.48e-11	32	1.819e-09	28	microRNA targets for mirtarget2.tarbase.targetscan.targetsIntersection.hsa-miR-1 from miRNAtargetIntersection	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-613	View Gene Set	1.212e-10	47	8.585e-09	29	microRNA targets for miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-613 from miRNAtargetIntersection	www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsIntersection.hsa-miR-613	View Gene Set	1.099e-09	36	7.527e-08	30	microRNA targets for mirbase.mirtarget2.targetscan.targetsIntersection.hsa-miR-613 from miRNAtargetIntersection	www.mirbase.org...
Null mirbase.tarbase.targetscan.targetsIntersection.hsa-miR-1	View Gene Set	5.535e-09	18	3.667e-07	31	microRNA targets for mirbase.tarbase.targetscan.targetsIntersection.hsa-miR-1 from miRNAtargetIntersection	www.mirbase.org...
Null miranda.mirbase.tarbase.targetsIntersection.hsa-miR-1	View Gene Set	6.017e-09	14	3.862e-07	32	microRNA targets for miranda.mirbase.tarbase.targetsIntersection.hsa-miR-1 from miRNAtargetIntersection	www.mirbase.org...
Null mirbase.mirtarget2.tarbase.targetsIntersection.hsa-miR-1	View Gene Set	6.142e-08	14	3.823e-06	33	microRNA targets for mirbase.mirtarget2.tarbase.targetsIntersection.hsa-miR-1 from miRNAtargetIntersection	www.mirbase.org...
Null mirbase.pictar.tarbase.targetsIntersection.hsa-miR-1	View Gene Set	1.3e-07	13	7.851e-06	34	microRNA targets for mirbase.pictar.tarbase.targetsIntersection.hsa-miR-1 from miRNAtargetIntersection	www.mirbase.org...
Null mirtarget2.pictar.targetscan.targetsIntersection.hsa-miR-29b	View Gene Set	3.375e-06	142	0.000198	35	microRNA targets for mirtarget2.pictar.targetscan.targetsIntersection.hsa-miR-29b from miRNAtargetIntersection	www.mirbase.org...
Null mirtarget2.pictar.targetscan.targetsIntersection.hsa-miR-29c	View Gene Set	1.118e-05	144	0.0006382	36	microRNA targets for mirtarget2.pictar.targetscan.targetsIntersection.hsa-miR-29c from miRNAtargetIntersection	www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsIntersection.hsa-miR-106b	View Gene Set	1.679e-05	58	0.0009318	37	microRNA targets for mirbase.mirtarget2.targetscan.targetsIntersection.hsa-miR-106b from miRNAtargetIntersection	www.mirbase.org...
Null mirtarget2.pictar.targetscan.targetsIntersection.hsa-miR-29a	View Gene Set	2.921e-05	142	0.001579	38	microRNA targets for mirtarget2.pictar.targetscan.targetsIntersection.hsa-miR-29a from miRNAtargetIntersection	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-106b	View Gene Set	3.363e-05	66	0.001771	39	microRNA targets for miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-106b from miRNAtargetIntersection	www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsIntersection.hsa-miR-29b	View Gene Set	3.853e-05	66	0.001979	40	microRNA targets for mirbase.mirtarget2.pictar.targetsIntersection.hsa-miR-29b from miRNAtargetIntersection	www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsIntersection.hsa-miR-93	View Gene Set	0.0001132	58	0.00567	41	microRNA targets for mirbase.mirtarget2.targetscan.targetsIntersection.hsa-miR-93 from miRNAtargetIntersection	www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsIntersection.hsa-miR-106b	View Gene Set	0.0002623	46	0.01283	42	microRNA targets for mirbase.mirtarget2.pictar.targetsIntersection.hsa-miR-106b from miRNAtargetIntersection	www.mirbase.org...
Null mirtarget2.pictar.targetscan.targetsIntersection.hsa-miR-302a	View Gene Set	0.0003109	93	0.01485	43	microRNA targets for mirtarget2.pictar.targetscan.targetsIntersection.hsa-miR-302a from miRNAtargetIntersection	www.mirbase.org...
Null miranda.mirbase.targetscan.targetsIntersection.hsa-miR-373	View Gene Set	0.0003662	27	0.01709	44	microRNA targets for miranda.mirbase.targetscan.targetsIntersection.hsa-miR-373 from miRNAtargetIntersection	www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-29b	View Gene Set	0.0004234	167	0.01891	45	microRNA targets for miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-29b from miRNAtargetIntersection	www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsIntersection.hsa-miR-29c	View Gene Set	0.0004148	72	0.01891	45	microRNA targets for mirbase.mirtarget2.pictar.targetsIntersection.hsa-miR-29c from miRNAtargetIntersection	www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsIntersection.hsa-miR-29a	View Gene Set	0.0005083	61	0.02221	47	microRNA targets for mirbase.mirtarget2.pictar.targetsIntersection.hsa-miR-29a from miRNAtargetIntersection	www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsIntersection.hsa-miR-19a	View Gene Set	0.0005473	79	0.02298	48	microRNA targets for mirbase.mirtarget2.pictar.targetsIntersection.hsa-miR-19a from miRNAtargetIntersection	www.mirbase.org...
Null mirtarget2.pictar.targetscan.targetsIntersection.hsa-miR-302b	View Gene Set	0.0005483	102	0.02298	48	microRNA targets for mirtarget2.pictar.targetscan.targetsIntersection.hsa-miR-302b from miRNAtargetIntersection	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-449b	View Gene Set	0.0007708	34	0.03163	50	microRNA targets for miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-449b from miRNAtargetIntersection	www.mirbase.org...
Null mirtarget2.pictar.targetscan.targetsIntersection.hsa-miR-372	View Gene Set	0.0007854	108	0.03163	50	microRNA targets for mirtarget2.pictar.targetscan.targetsIntersection.hsa-miR-372 from miRNAtargetIntersection	www.mirbase.org...
Null miranda.mirbase.targetscan.targetsIntersection.hsa-miR-106b	View Gene Set	0.0009066	71	0.03581	52	microRNA targets for miranda.mirbase.targetscan.targetsIntersection.hsa-miR-106b from miRNAtargetIntersection	www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-19a	View Gene Set	0.0009588	316	0.03695	53	microRNA targets for miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-19a from miRNAtargetIntersection	www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsIntersection.hsa-miR-373	View Gene Set	0.0009715	16	0.03695	53	microRNA targets for mirbase.mirtarget2.targetscan.targetsIntersection.hsa-miR-373 from miRNAtargetIntersection	www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-19b	View Gene Set	0.001073	193	0.04008	55	microRNA targets for miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-19b from miRNAtargetIntersection	www.mirbase.org...
Null miranda.mirbase.targetscan.targetsIntersection.hsa-miR-186	View Gene Set	0.001139	31	0.04106	56	microRNA targets for miranda.mirbase.targetscan.targetsIntersection.hsa-miR-186 from miRNAtargetIntersection	www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-19a	View Gene Set	0.001129	196	0.04106	56	microRNA targets for miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-19a from miRNAtargetIntersection	www.mirbase.org...
Null mirtarget2.pictar.targetscan.targetsIntersection.hsa-miR-302c	View Gene Set	0.001175	88	0.04162	58	microRNA targets for mirtarget2.pictar.targetscan.targetsIntersection.hsa-miR-302c from miRNAtargetIntersection	www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-211	View Gene Set	0.001271	103	0.0437	59	microRNA targets for miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-211 from miRNAtargetIntersection	www.mirbase.org...
Null mirbase.pictar.targetscan.targetsIntersection.hsa-miR-29c	View Gene Set	0.001276	127	0.0437	59	microRNA targets for mirbase.pictar.targetscan.targetsIntersection.hsa-miR-29c from miRNAtargetIntersection	www.mirbase.org...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null mirtarget2.tarbase.targetscan.targetsUnion.hsa-miR-1	View Gene Set	5.747e-63	832	1.33e-59	1	microRNA targets for mirtarget2.tarbase.targetscan.targetsUnion.hsa-miR-1 from miRNAtargetUnion	www.mirbase.org...
Null mirtarget2.pictar.tarbase.targetsUnion.hsa-miR-1	View Gene Set	4.06e-60	703	4.697e-57	2	microRNA targets for mirtarget2.pictar.tarbase.targetsUnion.hsa-miR-1 from miRNAtargetUnion	www.mirbase.org...
Null mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-1	View Gene Set	7.008e-60	860	5.406e-57	3	microRNA targets for mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-1 from miRNAtargetUnion	www.mirbase.org...
Null mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-206	View Gene Set	1.405e-59	867	8.126e-57	4	microRNA targets for mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-206 from miRNAtargetUnion	www.mirbase.org...
Null mirtarget2.tarbase.targetscan.targetsUnion.hsa-miR-206	View Gene Set	1.526e-55	768	7.061e-53	5	microRNA targets for mirtarget2.tarbase.targetscan.targetsUnion.hsa-miR-206 from miRNAtargetUnion	www.mirbase.org...
Null pictar.tarbase.targetscan.targetsUnion.hsa-miR-1	View Gene Set	3.633e-55	783	1.401e-52	6	microRNA targets for pictar.tarbase.targetscan.targetsUnion.hsa-miR-1 from miRNAtargetUnion	www.mirbase.org...
Null mirtarget2.pictar.tarbase.targetsUnion.hsa-miR-206	View Gene Set	2.322e-52	632	7.677e-50	7	microRNA targets for mirtarget2.pictar.tarbase.targetsUnion.hsa-miR-206 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.tarbase.targetscan.targetsUnion.hsa-miR-1	View Gene Set	2.944e-50	1233	8.514e-48	8	microRNA targets for mirbase.tarbase.targetscan.targetsUnion.hsa-miR-1 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-206	View Gene Set	4.703e-50	1315	1.209e-47	9	microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-206 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-1	View Gene Set	4.304e-49	1281	9.959e-47	10	microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-1 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-613	View Gene Set	7.467e-47	1353	1.571e-44	11	microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-613 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-206	View Gene Set	3.324e-46	1189	6.409e-44	12	microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-206 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.pictar.targetscan.targetsUnion.hsa-miR-1	View Gene Set	5.936e-46	1256	1.057e-43	13	microRNA targets for mirbase.pictar.targetscan.targetsUnion.hsa-miR-1 from miRNAtargetUnion	www.mirbase.org...
Null pictar.tarbase.targetscan.targetsUnion.hsa-miR-206	View Gene Set	1.358e-45	702	2.244e-43	14	microRNA targets for pictar.tarbase.targetscan.targetsUnion.hsa-miR-206 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-1	View Gene Set	1.852e-45	1160	2.816e-43	15	microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-1 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.pictar.targetscan.targetsUnion.hsa-miR-206	View Gene Set	1.947e-45	1275	2.816e-43	15	microRNA targets for mirbase.pictar.targetscan.targetsUnion.hsa-miR-206 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.tarbase.targetscan.targetsUnion.hsa-miR-206	View Gene Set	6.016e-42	1175	8.188e-40	17	microRNA targets for mirbase.tarbase.targetscan.targetsUnion.hsa-miR-206 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-613	View Gene Set	8.793e-42	1685	1.13e-39	18	microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-613 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.pictar.tarbase.targetsUnion.hsa-miR-1	View Gene Set	1.395e-41	1078	1.699e-39	19	microRNA targets for mirbase.pictar.tarbase.targetsUnion.hsa-miR-1 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-613	View Gene Set	3.372e-41	2082	3.901e-39	20	microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-613 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.tarbase.targetsUnion.hsa-miR-1	View Gene Set	5.391e-40	1008	5.941e-38	21	microRNA targets for mirbase.mirtarget2.tarbase.targetsUnion.hsa-miR-1 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-206	View Gene Set	2.438e-39	1942	2.565e-37	22	microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-206 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-206	View Gene Set	8.552e-39	1890	8.604e-37	23	microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-206 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-206	View Gene Set	1.823e-38	2269	1.758e-36	24	microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-206 from miRNAtargetUnion	www.mirbase.org...
Null miranda.pictar.targetscan.targetsUnion.hsa-miR-206	View Gene Set	2.07e-38	1924	1.916e-36	25	microRNA targets for miranda.pictar.targetscan.targetsUnion.hsa-miR-206 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-206	View Gene Set	1.205e-37	2208	1.072e-35	26	microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-206 from miRNAtargetUnion	www.mirbase.org...
Null miranda.tarbase.targetscan.targetsUnion.hsa-miR-206	View Gene Set	9.391e-35	1845	8.048e-33	27	microRNA targets for miranda.tarbase.targetscan.targetsUnion.hsa-miR-206 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-613	View Gene Set	3.344e-34	1959	2.763e-32	28	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-613 from miRNAtargetUnion	www.mirbase.org...
Null miranda.pictar.tarbase.targetsUnion.hsa-miR-206	View Gene Set	1.426e-33	1776	1.138e-31	29	microRNA targets for miranda.pictar.tarbase.targetsUnion.hsa-miR-206 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.pictar.tarbase.targetsUnion.hsa-miR-206	View Gene Set	3.799e-33	1015	2.931e-31	30	microRNA targets for mirbase.pictar.tarbase.targetsUnion.hsa-miR-206 from miRNAtargetUnion	www.mirbase.org...
Null miranda.tarbase.targetscan.targetsUnion.hsa-miR-1	View Gene Set	8.679e-33	2072	6.478e-31	31	microRNA targets for miranda.tarbase.targetscan.targetsUnion.hsa-miR-1 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-206	View Gene Set	1.649e-32	2162	1.193e-30	32	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-206 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-1	View Gene Set	3.978e-32	2092	2.789e-30	33	microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-1 from miRNAtargetUnion	www.mirbase.org...
Null miranda.pictar.tarbase.targetsUnion.hsa-miR-1	View Gene Set	5.712e-32	2000	3.888e-30	34	microRNA targets for miranda.pictar.tarbase.targetsUnion.hsa-miR-1 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.tarbase.targetsUnion.hsa-miR-206	View Gene Set	7.533e-32	961	4.98e-30	35	microRNA targets for mirbase.mirtarget2.tarbase.targetsUnion.hsa-miR-206 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-1	View Gene Set	2.15e-31	2033	1.382e-29	36	microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-1 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-1	View Gene Set	2.464e-31	2393	1.541e-29	37	microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-1 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.tarbase.targetsUnion.hsa-miR-1	View Gene Set	9.716e-31	1979	5.916e-29	38	microRNA targets for miranda.mirtarget2.tarbase.targetsUnion.hsa-miR-1 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-1	View Gene Set	1.11e-30	2328	6.586e-29	39	microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-1 from miRNAtargetUnion	www.mirbase.org...
Null miranda.pictar.targetscan.targetsUnion.hsa-miR-1	View Gene Set	2.229e-30	2071	1.29e-28	40	microRNA targets for miranda.pictar.targetscan.targetsUnion.hsa-miR-1 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.tarbase.targetsUnion.hsa-miR-206	View Gene Set	6.263e-30	1745	3.535e-28	41	microRNA targets for miranda.mirtarget2.tarbase.targetsUnion.hsa-miR-206 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.tarbase.targetsUnion.hsa-miR-1	View Gene Set	1.418e-29	2270	7.811e-28	42	microRNA targets for miranda.mirbase.tarbase.targetsUnion.hsa-miR-1 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.tarbase.targetsUnion.hsa-miR-206	View Gene Set	8.757e-29	2057	4.713e-27	43	microRNA targets for miranda.mirbase.tarbase.targetsUnion.hsa-miR-206 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-1	View Gene Set	3.511e-27	2285	1.846e-25	44	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-1 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-122	View Gene Set	4.347e-07	1597	2.235e-05	45	microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-122 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-122	View Gene Set	6.903e-06	1603	0.0003473	46	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-122 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-19a	View Gene Set	1.969e-05	2700	0.0009695	47	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-19a from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-190	View Gene Set	2.331e-05	2251	0.001124	48	microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-190 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-190	View Gene Set	3.094e-05	2274	0.001461	49	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-190 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-19a	View Gene Set	4.227e-05	2824	0.001956	50	microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-19a from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-19a	View Gene Set	5.425e-05	2708	0.002461	51	microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-19a from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-190	View Gene Set	6.801e-05	2237	0.003026	52	microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-190 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-122	View Gene Set	7.485e-05	1122	0.003268	53	microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-122 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-190	View Gene Set	0.0001466	1874	0.006166	54	microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-190 from miRNAtargetUnion	www.mirbase.org...
Null miranda.tarbase.targetscan.targetsUnion.hsa-miR-373	View Gene Set	0.0001447	2291	0.006166	54	microRNA targets for miranda.tarbase.targetscan.targetsUnion.hsa-miR-373 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-93	View Gene Set	0.0001788	2566	0.007388	56	microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-93 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.tarbase.targetsUnion.hsa-miR-373	View Gene Set	0.0002117	2213	0.008594	57	microRNA targets for miranda.mirtarget2.tarbase.targetsUnion.hsa-miR-373 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-499-5p	View Gene Set	0.0002597	1960	0.01036	58	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-499-5p from miRNAtargetUnion	www.mirbase.org...
Null miranda.pictar.targetscan.targetsUnion.hsa-miR-190	View Gene Set	0.0002788	1821	0.01093	59	microRNA targets for miranda.pictar.targetscan.targetsUnion.hsa-miR-190 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-373	View Gene Set	0.0002999	2363	0.01157	60	microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-373 from miRNAtargetUnion	www.mirbase.org...
Null miranda.pictar.targetscan.targetsUnion.hsa-miR-19a	View Gene Set	0.0003353	2502	0.01272	61	microRNA targets for miranda.pictar.targetscan.targetsUnion.hsa-miR-19a from miRNAtargetUnion	www.mirbase.org...
Null mirbase.pictar.targetscan.targetsUnion.hsa-miR-19a	View Gene Set	0.000344	1633	0.01284	62	microRNA targets for mirbase.pictar.targetscan.targetsUnion.hsa-miR-19a from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-19a	View Gene Set	0.0003567	2550	0.0131	63	microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-19a from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-19a	View Gene Set	0.0003817	2441	0.0138	64	microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-19a from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-93	View Gene Set	0.0003877	2467	0.0138	65	microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-93 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-143	View Gene Set	0.0004397	2037	0.01542	66	microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-143 from miRNAtargetUnion	www.mirbase.org...
Null miranda.pictar.tarbase.targetsUnion.hsa-miR-143	View Gene Set	0.0004552	1519	0.01572	67	microRNA targets for miranda.pictar.tarbase.targetsUnion.hsa-miR-143 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-93	View Gene Set	0.0004785	3033	0.01595	68	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-93 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-190	View Gene Set	0.0004826	1861	0.01595	68	microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-190 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-19a	View Gene Set	0.0004789	1678	0.01595	68	microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-19a from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-93	View Gene Set	0.0006975	2964	0.02211	71	microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-93 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-190b	View Gene Set	0.0006829	1815	0.02211	71	microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-190b from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-520b	View Gene Set	0.0006911	2039	0.02211	71	microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-520b from miRNAtargetUnion	www.mirbase.org...
Null miranda.pictar.targetscan.targetsUnion.hsa-miR-203	View Gene Set	0.0007136	2562	0.02211	74	microRNA targets for miranda.pictar.targetscan.targetsUnion.hsa-miR-203 from miRNAtargetUnion	www.mirbase.org...
Null miranda.pictar.targetscan.targetsUnion.hsa-miR-93	View Gene Set	0.0007167	2475	0.02211	74	microRNA targets for miranda.pictar.targetscan.targetsUnion.hsa-miR-93 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-373	View Gene Set	0.0007305	2793	0.02224	76	microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-373 from miRNAtargetUnion	www.mirbase.org...
Null mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-10b	View Gene Set	0.0007622	334	0.02291	77	microRNA targets for mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-10b from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-573	View Gene Set	0.0008445	2606	0.02505	78	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-573 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-221	View Gene Set	0.0009107	1386	0.02667	79	microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-221 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-122	View Gene Set	0.001033	868	0.02988	80	microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-122 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-373	View Gene Set	0.001097	2708	0.03096	81	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-373 from miRNAtargetUnion	www.mirbase.org...
Null mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-10a	View Gene Set	0.001096	338	0.03096	81	microRNA targets for mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-10a from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.tarbase.targetsUnion.hsa-miR-373	View Gene Set	0.001161	2615	0.03197	83	microRNA targets for miranda.mirbase.tarbase.targetsUnion.hsa-miR-373 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-93	View Gene Set	0.001148	3099	0.03197	83	microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-93 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-190b	View Gene Set	0.001258	1841	0.03396	85	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-190b from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-203	View Gene Set	0.001276	2750	0.03396	85	microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-203 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-203	View Gene Set	0.001292	2670	0.03396	85	microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-203 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.tarbase.targetsUnion.hsa-miR-29b	View Gene Set	0.001282	1064	0.03396	85	microRNA targets for mirbase.mirtarget2.tarbase.targetsUnion.hsa-miR-29b from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-18a	View Gene Set	0.001416	1612	0.03683	89	microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-18a from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-499-5p	View Gene Set	0.001546	1536	0.03976	90	microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-499-5p from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-18a	View Gene Set	0.001601	2083	0.03983	91	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-18a from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-203	View Gene Set	0.001598	2847	0.03983	91	microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-203 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-143	View Gene Set	0.001582	1625	0.03983	91	microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-143 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-203	View Gene Set	0.001649	2751	0.04059	94	microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-203 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-20a	View Gene Set	0.001799	2679	0.04383	95	microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-20a from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-18a	View Gene Set	0.001862	1619	0.04489	96	microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-18a from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.tarbase.targetsUnion.hsa-miR-143	View Gene Set	0.00193	1962	0.04558	97	microRNA targets for miranda.mirbase.tarbase.targetsUnion.hsa-miR-143 from miRNAtargetUnion	www.mirbase.org...
Null mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-106b	View Gene Set	0.001927	1351	0.04558	97	microRNA targets for mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-106b from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-520b	View Gene Set	0.001991	2418	0.04608	99	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-520b from miRNAtargetUnion	www.mirbase.org...
Null mirtarget2.tarbase.targetscan.targetsUnion.hsa-miR-20b	View Gene Set	0.001984	1283	0.04608	99	microRNA targets for mirtarget2.tarbase.targetscan.targetsUnion.hsa-miR-20b from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-520b	View Gene Set	0.002137	2489	0.04848	101	microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-520b from miRNAtargetUnion	www.mirbase.org...
Null mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-20a	View Gene Set	0.002127	1350	0.04848	101	microRNA targets for mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-20a from miRNAtargetUnion	www.mirbase.org...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null EGFR1 Signaling Pathway	View Gene Set	0.0002919	159	0.005535	1	From NetPath for EGFR1 Signaling Pathway	www.netpath.org...
Null IL-4 Signaling Pathway	View Gene Set	0.0005535	217	0.005535	1	From NetPath for IL-4 Signaling Pathway	www.netpath.org...
Null IL-9 Signaling Pathway	View Gene Set	0.005117	25	0.03411	3	From NetPath for IL-9 Signaling Pathway	www.netpath.org...
Null Hedgehog Signaling Pathway	View Gene Set	0.008421	22	0.04211	4	From NetPath for Hedgehog Signaling Pathway	www.netpath.org...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null IL-4 Signaling Pathway	View Gene Set	4.323e-06	90	8.213e-05	1	From NetPath for IL-4 Signaling Pathway	www.netpath.org...
Null TGF-beta Receptor Signaling Pathway	View Gene Set	2.376e-05	739	0.0002257	2	From NetPath for TGF-beta Receptor Signaling Pathway	www.netpath.org...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null IL-4 Signaling Pathway	View Gene Set	2.643e-07	301	5.286e-06	1	From NetPath for IL-4 Signaling Pathway	www.netpath.org...
Null EGFR1 Signaling Pathway	View Gene Set	0.000135	253	0.0008999	2	From NetPath for EGFR1 Signaling Pathway	www.netpath.org...
Null TGF-beta Receptor Signaling Pathway	View Gene Set	0.0001065	1296	0.0008999	2	From NetPath for TGF-beta Receptor Signaling Pathway	www.netpath.org...
Null Hedgehog Signaling Pathway	View Gene Set	0.003218	25	0.01609	4	From NetPath for Hedgehog Signaling Pathway	www.netpath.org...
Null IL-9 Signaling Pathway	View Gene Set	0.005117	26	0.02047	5	From NetPath for IL-9 Signaling Pathway	www.netpath.org...
Null IL-6 Signaling Pathway	View Gene Set	0.01165	105	0.03882	6	From NetPath for IL-6 Signaling Pathway	www.netpath.org...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null IL1	View Gene Set	0.001249	85	0.01426	1	From NetPath for IL1	www.netpath.org...
Null IL4	View Gene Set	0.001414	199	0.01426	1	From NetPath for IL4	www.netpath.org...
Null TNFalpha	View Gene Set	0.001783	113	0.01426	1	From NetPath for TNFalpha	www.netpath.org...
Null IL6	View Gene Set	0.004381	13	0.02047	4	From NetPath for IL6	www.netpath.org...
Null IL9	View Gene Set	0.005117	25	0.02047	4	From NetPath for IL9	www.netpath.org...
Null RANKL	View Gene Set	0.003957	58	0.02047	4	From NetPath for RANKL	www.netpath.org...
Null Wnt	View Gene Set	0.009678	36	0.03318	7	From NetPath for Wnt	www.netpath.org...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null TGF_beta_Receptor	View Gene Set	9.043e-06	399	0.0001718	1	From NetPath for TGF_beta_Receptor	www.netpath.org...
Null IL4	View Gene Set	2.342e-05	77	0.0002225	2	From NetPath for IL4	www.netpath.org...
Null TSH	View Gene Set	0.001574	45	0.009968	3	From NetPath for TSH	www.netpath.org...
Null Leptin	View Gene Set	0.004857	79	0.02307	4	From NetPath for Leptin	www.netpath.org...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null IL4	View Gene Set	3.329e-06	269	7.989e-05	1	From NetPath for IL4	www.netpath.org...
Null TGF_beta_Receptor	View Gene Set	0.0001769	594	0.002123	2	From NetPath for TGF_beta_Receptor	www.netpath.org...
Null IL1	View Gene Set	0.0005008	120	0.004006	3	From NetPath for IL1	www.netpath.org...
Null TNFalpha	View Gene Set	0.0008259	121	0.004956	4	From NetPath for TNFalpha	www.netpath.org...
Null Leptin	View Gene Set	0.001355	110	0.006504	5	From NetPath for Leptin	www.netpath.org...
Null IL6	View Gene Set	0.002952	14	0.008358	6	From NetPath for IL6	www.netpath.org...
Null RANKL	View Gene Set	0.002609	74	0.008358	6	From NetPath for RANKL	www.netpath.org...
Null TSH	View Gene Set	0.003134	90	0.008358	6	From NetPath for TSH	www.netpath.org...
Null Wnt	View Gene Set	0.002176	45	0.008358	6	From NetPath for Wnt	www.netpath.org...
Null IL9	View Gene Set	0.005117	26	0.01228	10	From NetPath for IL9	www.netpath.org...
Null EGFR1	View Gene Set	0.01045	153	0.02193	11	From NetPath for EGFR1	www.netpath.org...
Null IL-7	View Gene Set	0.01096	34	0.02193	11	From NetPath for IL-7	www.netpath.org...
Null Notch	View Gene Set	0.01519	22	0.02804	13	From NetPath for Notch	www.netpath.org...
Null IL2	View Gene Set	0.02684	796	0.04601	14	From NetPath for IL2	www.netpath.org...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null V_ISRE_01	View Gene Set	3.328e-05	216	0.005517	1	List of genes containing a conserved (FDR < 0.1%) V$ISRE_01 TFBS located within 3 kb around the TSS for the ISGF-3 transcription factor	www.gene-regula...
Null V_RSRFC4_01	View Gene Set	5.18e-05	394	0.005517	1	List of genes containing a conserved (FDR < 0.1%) V$RSRFC4_01 TFBS located within 3 kb around the TSS for the RSRFC4 transcription factor	www.gene-regula...
Null V_HOXA3_01	View Gene Set	9.301e-05	81	0.00632	3	List of genes containing a conserved (FDR < 0.1%) V$HOXA3_01 TFBS located within 3 kb around the TSS for the HOXA3 transcription factor	www.gene-regula...
Null V_OCT_C	View Gene Set	0.0001187	316	0.00632	3	List of genes containing a conserved (FDR < 0.1%) V$OCT_C TFBS located within 3 kb around the TSS for the Oct-B1 transcription factor	www.gene-regula...
Null V_EVI1_03	View Gene Set	0.0005891	149	0.0207	5	List of genes containing a conserved (FDR < 0.1%) V$EVI1_03 TFBS located within 3 kb around the TSS for the Evi-1 transcription factor	www.gene-regula...
Null V_LUN1_01	View Gene Set	0.0006146	194	0.0207	5	List of genes containing a conserved (FDR < 0.1%) V$LUN1_01 TFBS located within 3 kb around the TSS for the LUN-1 transcription factor	www.gene-regula...
Null V_OCT1_07	View Gene Set	0.0006802	213	0.0207	5	List of genes containing a conserved (FDR < 0.1%) V$OCT1_07 TFBS located within 3 kb around the TSS for the POU2F1 transcription factor	www.gene-regula...
Null V_FREAC2_01	View Gene Set	0.001188	227	0.02352	8	List of genes containing a conserved (FDR < 0.1%) V$FREAC2_01 TFBS located within 3 kb around the TSS for the FOXF2 transcription factor	www.gene-regula...
Null V_HNF1_01	View Gene Set	0.001325	185	0.02352	8	List of genes containing a conserved (FDR < 0.1%) V$HNF1_01 TFBS located within 3 kb around the TSS for the HNF-1A transcription factor	www.gene-regula...
Null V_LHX3_01	View Gene Set	0.001236	80	0.02352	8	List of genes containing a conserved (FDR < 0.1%) V$LHX3_01 TFBS located within 3 kb around the TSS for the LHX3a transcription factor	www.gene-regula...
Null V_PBX1_02	View Gene Set	0.001253	223	0.02352	8	List of genes containing a conserved (FDR < 0.1%) V$PBX1_02 TFBS located within 3 kb around the TSS for the Pbx1a transcription factor	www.gene-regula...
Null V_RORA2_01	View Gene Set	0.0009253	370	0.02352	8	List of genes containing a conserved (FDR < 0.1%) V$RORA2_01 TFBS located within 3 kb around the TSS for the RORalpha2 transcription factor	www.gene-regula...
Null V_FOXJ2_02	View Gene Set	0.002016	257	0.03304	13	List of genes containing a conserved (FDR < 0.1%) V$FOXJ2_02 TFBS located within 3 kb around the TSS for the FOXJ2 (long isoform) transcription factor	www.gene-regula...
Null V_POU3F2_02	View Gene Set	0.002197	261	0.03342	14	List of genes containing a conserved (FDR < 0.1%) V$POU3F2_02 TFBS located within 3 kb around the TSS for the POU3F2 transcription factor	www.gene-regula...
Null V_PBX1_01	View Gene Set	0.002753	67	0.03909	15	List of genes containing a conserved (FDR < 0.1%) V$PBX1_01 TFBS located within 3 kb around the TSS for the Pbx1a transcription factor	www.gene-regula...
Null V_POU3F2_01	View Gene Set	0.003963	324	0.04966	16	List of genes containing a conserved (FDR < 0.1%) V$POU3F2_01 TFBS located within 3 kb around the TSS for the POU3F2 transcription factor	www.gene-regula...
Null V_S8_01	View Gene Set	0.003859	69	0.04966	16	List of genes containing a conserved (FDR < 0.1%) V$S8_01 TFBS located within 3 kb around the TSS for the S8 transcription factor	www.gene-regula...

Results

AFA results for: miR.1vsControl.ls

Gene Set Collection: KEGG

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Collection: GO

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Collection: Broad.c1.CYTOBAND

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Collection: Broad.c2.CGP

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Collection: Broad.c2.CP.BIOCARTA

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Collection: Broad.c2.CP.KEGG

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Collection: Broad.c2.CP.REACTOME

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Collection: Broad.c3.MIR

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Collection: Broad.c3.TFT

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Collection: Broad.c4.CGN

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Collection: Broad.c4.CM

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Collection: Broad.c5.BP

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Collection: Broad.c5.CC

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Collection: Broad.c5.MF

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Collection: PMID

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Collection: Prosite

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Collection: pathwayCommons.nci-nature

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Collection: pathwayCommons.reactome

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Collection: miranda.targets

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Collection: mirbase.targets

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Collection: mirtarget2.targets

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Collection: pictar.targets

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Collection: tarbase.targets

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Collection: targetscan.targets

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Collection: miRNAtargetIntersection

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Collection: miRNAtargetUnion

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Collection: hprdBatch.UP

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Collection: hprdBatch.DOWN

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Collection: hprdBatch.DIFFERENT

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Collection: hprdManual.UP

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Collection: hprdManual.DOWN

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Collection: hprdManual.DIFFERENT

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Collection: tfbsK3Z3

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down