Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
KEGG 04141 | View Gene Set | 7.114e-13 | 167 | 1.522e-10 | 1 | Protein processing in endoplasmic reticulum | www.genome.jp/d... |
KEGG 05012 | View Gene Set | 5.082e-07 | 132 | 5.438e-05 | 2 | Parkinson's disease | www.genome.jp/d... |
KEGG 00190 | View Gene Set | 1.073e-06 | 134 | 5.885e-05 | 3 | Oxidative phosphorylation | www.genome.jp/d... |
KEGG 00970 | View Gene Set | 1.375e-06 | 41 | 5.885e-05 | 3 | Aminoacyl-tRNA biosynthesis | www.genome.jp/d... |
KEGG 04120 | View Gene Set | 1.37e-06 | 139 | 5.885e-05 | 3 | Ubiquitin mediated proteolysis | www.genome.jp/d... |
KEGG 05016 | View Gene Set | 3.054e-06 | 184 | 0.0001089 | 6 | Huntington's disease | www.genome.jp/d... |
KEGG 03050 | View Gene Set | 1.588e-05 | 48 | 0.0004853 | 7 | Proteasome | www.genome.jp/d... |
KEGG 01100 | View Gene Set | 2.252e-05 | 1120 | 0.0006023 | 8 | Metabolic pathways | www.genome.jp/d... |
KEGG 05010 | View Gene Set | 5.585e-05 | 168 | 0.001328 | 9 | Alzheimer's disease | www.genome.jp/d... |
KEGG 04962 | View Gene Set | 0.0001513 | 44 | 0.003238 | 10 | Vasopressin-regulated water reabsorption | www.genome.jp/d... |
KEGG 00020 | View Gene Set | 0.0005108 | 31 | 0.008565 | 11 | Citrate cycle (TCA cycle) | www.genome.jp/d... |
KEGG 03060 | View Gene Set | 0.0005053 | 24 | 0.008565 | 11 | Protein export | www.genome.jp/d... |
KEGG 04910 | View Gene Set | 0.0005203 | 137 | 0.008565 | 11 | Insulin signaling pathway | www.genome.jp/d... |
KEGG 04664 | View Gene Set | 0.001102 | 79 | 0.01685 | 14 | Fc epsilon RI signaling pathway | www.genome.jp/d... |
KEGG 03010 | View Gene Set | 0.002842 | 88 | 0.04055 | 15 | Ribosome | www.genome.jp/d... |
Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
GO GO:0005739 | View Gene Set | 2.552e-30 | 1274 | 3.409e-26 | 1 | mitochondrion | amigo.geneontol... |
GO GO:0044444 | View Gene Set | 2.215e-23 | 5184 | 1.48e-19 | 2 | cytoplasmic part | amigo.geneontol... |
GO GO:0005737 | View Gene Set | 4.281e-23 | 7676 | 1.907e-19 | 3 | cytoplasm | amigo.geneontol... |
GO GO:0044429 | View Gene Set | 5.47e-21 | 619 | 1.827e-17 | 4 | mitochondrial part | amigo.geneontol... |
GO GO:0044424 | View Gene Set | 7.144e-20 | 10976 | 1.909e-16 | 5 | intracellular part | amigo.geneontol... |
GO GO:0006412 | View Gene Set | 2.1e-19 | 412 | 4.677e-16 | 6 | translation | amigo.geneontol... |
GO GO:0005622 | View Gene Set | 1.747e-18 | 11329 | 3.334e-15 | 7 | intracellular | amigo.geneontol... |
GO GO:0043231 | View Gene Set | 2.559e-18 | 8376 | 4.273e-15 | 8 | intracellular membrane-bounded organelle | amigo.geneontol... |
GO GO:0043227 | View Gene Set | 3.328e-18 | 8383 | 4.941e-15 | 9 | membrane-bounded organelle | amigo.geneontol... |
GO GO:0044422 | View Gene Set | 4.002e-18 | 5089 | 5.346e-15 | 10 | organelle part | amigo.geneontol... |
GO GO:0044446 | View Gene Set | 7.963e-18 | 5019 | 9.671e-15 | 11 | intracellular organelle part | amigo.geneontol... |
GO GO:0043229 | View Gene Set | 9.6e-17 | 9346 | 1.069e-13 | 12 | intracellular organelle | amigo.geneontol... |
GO GO:0043226 | View Gene Set | 1.515e-16 | 9360 | 1.557e-13 | 13 | organelle | amigo.geneontol... |
GO GO:0070013 | View Gene Set | 1.576e-15 | 1845 | 1.504e-12 | 14 | intracellular organelle lumen | amigo.geneontol... |
GO GO:0044267 | View Gene Set | 2.797e-15 | 2465 | 2.491e-12 | 15 | cellular protein metabolic process | amigo.geneontol... |
GO GO:0031974 | View Gene Set | 6.903e-15 | 1917 | 5.764e-12 | 16 | membrane-enclosed lumen | amigo.geneontol... |
GO GO:0005740 | View Gene Set | 7.961e-15 | 444 | 6.256e-12 | 17 | mitochondrial envelope | amigo.geneontol... |
GO GO:0031966 | View Gene Set | 2.672e-14 | 420 | 1.983e-11 | 18 | mitochondrial membrane | amigo.geneontol... |
GO GO:0019538 | View Gene Set | 3.772e-14 | 2935 | 2.519e-11 | 19 | protein metabolic process | amigo.geneontol... |
GO GO:0030529 | View Gene Set | 3.716e-14 | 504 | 2.519e-11 | 19 | ribonucleoprotein complex | amigo.geneontol... |
GO GO:0005743 | View Gene Set | 7.782e-14 | 305 | 4.951e-11 | 21 | mitochondrial inner membrane | amigo.geneontol... |
GO GO:0043233 | View Gene Set | 8.641e-14 | 1881 | 5.247e-11 | 22 | organelle lumen | amigo.geneontol... |
GO GO:0034660 | View Gene Set | 1.015e-13 | 236 | 5.895e-11 | 23 | ncRNA metabolic process | amigo.geneontol... |
GO GO:0032991 | View Gene Set | 1.985e-13 | 3237 | 1.105e-10 | 24 | macromolecular complex | amigo.geneontol... |
GO GO:0019866 | View Gene Set | 1.006e-12 | 334 | 5.378e-10 | 25 | organelle inner membrane | amigo.geneontol... |
GO GO:0005759 | View Gene Set | 6.749e-12 | 223 | 3.339e-09 | 26 | mitochondrial matrix | amigo.geneontol... |
GO GO:0031980 | View Gene Set | 6.749e-12 | 223 | 3.339e-09 | 26 | mitochondrial lumen | amigo.geneontol... |
GO GO:0044455 | View Gene Set | 2.312e-11 | 133 | 1.103e-08 | 28 | mitochondrial membrane part | amigo.geneontol... |
GO GO:0031967 | View Gene Set | 2.787e-11 | 672 | 1.284e-08 | 29 | organelle envelope | amigo.geneontol... |
GO GO:0044237 | View Gene Set | 1.716e-10 | 7431 | 7.642e-08 | 30 | cellular metabolic process | amigo.geneontol... |
GO GO:0006457 | View Gene Set | 1.883e-10 | 172 | 7.862e-08 | 31 | protein folding | amigo.geneontol... |
GO GO:0022613 | View Gene Set | 1.883e-10 | 194 | 7.862e-08 | 31 | ribonucleoprotein complex biogenesis | amigo.geneontol... |
GO GO:0031975 | View Gene Set | 1.97e-10 | 685 | 7.975e-08 | 33 | envelope | amigo.geneontol... |
GO GO:0005730 | View Gene Set | 2.776e-10 | 734 | 1.091e-07 | 34 | nucleolus | amigo.geneontol... |
GO GO:0030163 | View Gene Set | 3.697e-10 | 398 | 1.411e-07 | 35 | protein catabolic process | amigo.geneontol... |
GO GO:0042254 | View Gene Set | 4.533e-10 | 130 | 1.682e-07 | 36 | ribosome biogenesis | amigo.geneontol... |
GO GO:0044257 | View Gene Set | 1.071e-09 | 349 | 3.869e-07 | 37 | cellular protein catabolic process | amigo.geneontol... |
GO GO:0003723 | View Gene Set | 1.123e-09 | 732 | 3.95e-07 | 38 | RNA binding | amigo.geneontol... |
GO GO:0005840 | View Gene Set | 1.21e-09 | 198 | 4.144e-07 | 39 | ribosome | amigo.geneontol... |
GO GO:0031090 | View Gene Set | 1.323e-09 | 1905 | 4.418e-07 | 40 | organelle membrane | amigo.geneontol... |
GO GO:0051603 | View Gene Set | 1.536e-09 | 346 | 5.006e-07 | 41 | proteolysis involved in cellular protein catabolic process | amigo.geneontol... |
GO GO:0006399 | View Gene Set | 2.136e-09 | 118 | 6.795e-07 | 42 | tRNA metabolic process | amigo.geneontol... |
GO GO:0016567 | View Gene Set | 2.215e-09 | 286 | 6.881e-07 | 43 | protein ubiquitination | amigo.geneontol... |
GO GO:0010498 | View Gene Set | 2.347e-09 | 166 | 7.127e-07 | 44 | proteasomal protein catabolic process | amigo.geneontol... |
GO GO:0006396 | View Gene Set | 2.718e-09 | 578 | 8.069e-07 | 45 | RNA processing | amigo.geneontol... |
GO GO:0070647 | View Gene Set | 4.819e-09 | 356 | 1.4e-06 | 46 | protein modification by small protein conjugation or removal | amigo.geneontol... |
GO GO:0008152 | View Gene Set | 5.125e-09 | 8439 | 1.457e-06 | 47 | metabolic process | amigo.geneontol... |
GO GO:0006511 | View Gene Set | 5.62e-09 | 296 | 1.564e-06 | 48 | ubiquitin-dependent protein catabolic process | amigo.geneontol... |
GO GO:0034470 | View Gene Set | 9.286e-09 | 193 | 2.532e-06 | 49 | ncRNA processing | amigo.geneontol... |
GO GO:0019941 | View Gene Set | 1.056e-08 | 302 | 2.661e-06 | 50 | modification-dependent protein catabolic process | amigo.geneontol... |
GO GO:0043161 | View Gene Set | 1.016e-08 | 162 | 2.661e-06 | 50 | proteasomal ubiquitin-dependent protein catabolic process | amigo.geneontol... |
GO GO:0043632 | View Gene Set | 1.056e-08 | 302 | 2.661e-06 | 50 | modification-dependent macromolecule catabolic process | amigo.geneontol... |
GO GO:0046907 | View Gene Set | 1.03e-08 | 753 | 2.661e-06 | 50 | intracellular transport | amigo.geneontol... |
GO GO:0045333 | View Gene Set | 1.335e-08 | 100 | 3.304e-06 | 54 | cellular respiration | amigo.geneontol... |
GO GO:0032446 | View Gene Set | 1.942e-08 | 310 | 4.717e-06 | 55 | protein modification by small protein conjugation | amigo.geneontol... |
GO GO:0009057 | View Gene Set | 2.733e-08 | 570 | 6.405e-06 | 56 | macromolecule catabolic process | amigo.geneontol... |
GO GO:0044260 | View Gene Set | 2.69e-08 | 5699 | 6.405e-06 | 56 | cellular macromolecule metabolic process | amigo.geneontol... |
GO GO:0006418 | View Gene Set | 4.38e-08 | 45 | 9.752e-06 | 58 | tRNA aminoacylation for protein translation | amigo.geneontol... |
GO GO:0043038 | View Gene Set | 4.38e-08 | 45 | 9.752e-06 | 58 | amino acid activation | amigo.geneontol... |
GO GO:0043039 | View Gene Set | 4.38e-08 | 45 | 9.752e-06 | 58 | tRNA aminoacylation | amigo.geneontol... |
GO GO:0044238 | View Gene Set | 4.612e-08 | 7629 | 1.01e-05 | 61 | primary metabolic process | amigo.geneontol... |
GO GO:0004812 | View Gene Set | 4.933e-08 | 46 | 1.03e-05 | 62 | aminoacyl-tRNA ligase activity | amigo.geneontol... |
GO GO:0016875 | View Gene Set | 4.933e-08 | 46 | 1.03e-05 | 62 | ligase activity forming carbon-oxygen bonds | amigo.geneontol... |
GO GO:0016876 | View Gene Set | 4.933e-08 | 46 | 1.03e-05 | 62 | ligase activity forming aminoacyl-tRNA and related compounds | amigo.geneontol... |
GO GO:0044265 | View Gene Set | 6.667e-08 | 479 | 1.361e-05 | 65 | cellular macromolecule catabolic process | amigo.geneontol... |
GO GO:0031981 | View Gene Set | 6.723e-08 | 1518 | 1.361e-05 | 65 | nuclear lumen | amigo.geneontol... |
GO GO:0043170 | View Gene Set | 7.038e-08 | 6274 | 1.403e-05 | 67 | macromolecule metabolic process | amigo.geneontol... |
GO GO:0003824 | View Gene Set | 7.521e-08 | 5198 | 1.478e-05 | 68 | catalytic activity | amigo.geneontol... |
GO GO:0044428 | View Gene Set | 1.542e-07 | 1938 | 2.985e-05 | 69 | nuclear part | amigo.geneontol... |
GO GO:0051443 | View Gene Set | 1.732e-07 | 71 | 3.307e-05 | 70 | positive regulation of ubiquitin-protein ligase activity | amigo.geneontol... |
GO GO:0051437 | View Gene Set | 1.842e-07 | 64 | 3.466e-05 | 71 | positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle | amigo.geneontol... |
GO GO:0022900 | View Gene Set | 2.473e-07 | 115 | 4.525e-05 | 72 | electron transport chain | amigo.geneontol... |
GO GO:0070469 | View Gene Set | 2.456e-07 | 77 | 4.525e-05 | 72 | respiratory chain | amigo.geneontol... |
GO GO:0005829 | View Gene Set | 2.691e-07 | 1323 | 4.858e-05 | 74 | cytosol | amigo.geneontol... |
GO GO:0033279 | View Gene Set | 3.783e-07 | 121 | 6.65e-05 | 75 | ribosomal subunit | amigo.geneontol... |
GO GO:0008135 | View Gene Set | 3.781e-07 | 86 | 6.65e-05 | 75 | translation factor activity nucleic acid binding | amigo.geneontol... |
GO GO:0003735 | View Gene Set | 4.147e-07 | 158 | 7.196e-05 | 77 | structural constituent of ribosome | amigo.geneontol... |
GO GO:0006364 | View Gene Set | 4.942e-07 | 97 | 8.466e-05 | 78 | rRNA processing | amigo.geneontol... |
GO GO:0006091 | View Gene Set | 5.141e-07 | 339 | 8.695e-05 | 79 | generation of precursor metabolites and energy | amigo.geneontol... |
GO GO:0000502 | View Gene Set | 5.266e-07 | 63 | 8.795e-05 | 80 | proteasome complex | amigo.geneontol... |
GO GO:0010467 | View Gene Set | 6.406e-07 | 3806 | 0.0001057 | 81 | gene expression | amigo.geneontol... |
GO GO:0006413 | View Gene Set | 7.073e-07 | 62 | 0.0001152 | 82 | translational initiation | amigo.geneontol... |
GO GO:0006417 | View Gene Set | 7.617e-07 | 151 | 0.0001212 | 83 | regulation of translation | amigo.geneontol... |
GO GO:0051351 | View Gene Set | 7.554e-07 | 74 | 0.0001212 | 83 | positive regulation of ligase activity | amigo.geneontol... |
GO GO:0000313 | View Gene Set | 8.108e-07 | 49 | 0.000126 | 85 | organellar ribosome | amigo.geneontol... |
GO GO:0005761 | View Gene Set | 8.108e-07 | 49 | 0.000126 | 85 | mitochondrial ribosome | amigo.geneontol... |
GO GO:0016874 | View Gene Set | 1.004e-06 | 436 | 0.0001542 | 87 | ligase activity | amigo.geneontol... |
GO GO:0051082 | View Gene Set | 1.233e-06 | 113 | 0.0001873 | 88 | unfolded protein binding | amigo.geneontol... |
GO GO:0015980 | View Gene Set | 1.264e-06 | 163 | 0.0001897 | 89 | energy derivation by oxidation of organic compounds | amigo.geneontol... |
GO GO:0003743 | View Gene Set | 1.296e-06 | 52 | 0.0001925 | 90 | translation initiation factor activity | amigo.geneontol... |
GO GO:0016072 | View Gene Set | 1.437e-06 | 101 | 0.0002109 | 91 | rRNA metabolic process | amigo.geneontol... |
GO GO:0031398 | View Gene Set | 1.557e-06 | 95 | 0.0002262 | 92 | positive regulation of protein ubiquitination | amigo.geneontol... |
GO GO:0051439 | View Gene Set | 1.795e-06 | 68 | 0.0002579 | 93 | regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle | amigo.geneontol... |
GO GO:0031145 | View Gene Set | 2.006e-06 | 64 | 0.0002851 | 94 | anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | amigo.geneontol... |
GO GO:0070936 | View Gene Set | 2.559e-06 | 26 | 0.0003595 | 95 | protein K48-linked ubiquitination | amigo.geneontol... |
GO GO:0005746 | View Gene Set | 2.583e-06 | 70 | 0.0003595 | 95 | mitochondrial respiratory chain | amigo.geneontol... |
GO GO:0051436 | View Gene Set | 2.65e-06 | 62 | 0.0003651 | 97 | negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle | amigo.geneontol... |
GO GO:0022904 | View Gene Set | 5.566e-06 | 65 | 0.0007587 | 98 | respiratory electron transport chain | amigo.geneontol... |
GO GO:0051438 | View Gene Set | 5.679e-06 | 82 | 0.0007664 | 99 | regulation of ubiquitin-protein ligase activity | amigo.geneontol... |
GO GO:0015935 | View Gene Set | 6.691e-06 | 59 | 0.0008939 | 100 | small ribosomal subunit | amigo.geneontol... |
GO GO:0043234 | View Gene Set | 7.076e-06 | 2680 | 0.000936 | 101 | protein complex | amigo.geneontol... |
GO GO:0015031 | View Gene Set | 7.863e-06 | 888 | 0.00103 | 102 | protein transport | amigo.geneontol... |
GO GO:0048193 | View Gene Set | 1.033e-05 | 137 | 0.00134 | 103 | Golgi vesicle transport | amigo.geneontol... |
GO GO:0005741 | View Gene Set | 1.109e-05 | 90 | 0.001424 | 104 | mitochondrial outer membrane | amigo.geneontol... |
GO GO:0042773 | View Gene Set | 1.144e-05 | 57 | 0.001442 | 105 | ATP synthesis coupled electron transport | amigo.geneontol... |
GO GO:0042775 | View Gene Set | 1.144e-05 | 57 | 0.001442 | 105 | mitochondrial ATP synthesis coupled electron transport | amigo.geneontol... |
GO GO:0006508 | View Gene Set | 1.352e-05 | 783 | 0.001688 | 107 | proteolysis | amigo.geneontol... |
GO GO:0006839 | View Gene Set | 1.375e-05 | 75 | 0.0017 | 108 | mitochondrial transport | amigo.geneontol... |
GO GO:0045184 | View Gene Set | 1.492e-05 | 904 | 0.001828 | 109 | establishment of protein localization | amigo.geneontol... |
GO GO:0051340 | View Gene Set | 1.74e-05 | 85 | 0.002113 | 110 | regulation of ligase activity | amigo.geneontol... |
GO GO:0019787 | View Gene Set | 2.095e-05 | 210 | 0.002521 | 111 | small conjugating protein ligase activity | amigo.geneontol... |
GO GO:0004842 | View Gene Set | 2.778e-05 | 191 | 0.003313 | 112 | ubiquitin-protein ligase activity | amigo.geneontol... |
GO GO:0070979 | View Gene Set | 2.918e-05 | 25 | 0.00345 | 113 | protein K11-linked ubiquitination | amigo.geneontol... |
GO GO:0031396 | View Gene Set | 3.001e-05 | 121 | 0.003517 | 114 | regulation of protein ubiquitination | amigo.geneontol... |
GO GO:0005793 | View Gene Set | 3.128e-05 | 52 | 0.003633 | 115 | ER-Golgi intermediate compartment | amigo.geneontol... |
GO GO:0005747 | View Gene Set | 3.213e-05 | 46 | 0.003638 | 116 | mitochondrial respiratory chain complex I | amigo.geneontol... |
GO GO:0030964 | View Gene Set | 3.213e-05 | 46 | 0.003638 | 116 | NADH dehydrogenase complex | amigo.geneontol... |
GO GO:0045271 | View Gene Set | 3.213e-05 | 46 | 0.003638 | 116 | respiratory chain complex I | amigo.geneontol... |
GO GO:0006120 | View Gene Set | 3.384e-05 | 43 | 0.0038 | 119 | mitochondrial electron transport NADH to ubiquinone | amigo.geneontol... |
GO GO:0051352 | View Gene Set | 3.678e-05 | 66 | 0.004061 | 120 | negative regulation of ligase activity | amigo.geneontol... |
GO GO:0051444 | View Gene Set | 3.678e-05 | 66 | 0.004061 | 120 | negative regulation of ubiquitin-protein ligase activity | amigo.geneontol... |
GO GO:0009295 | View Gene Set | 3.944e-05 | 31 | 0.004284 | 122 | nucleoid | amigo.geneontol... |
GO GO:0042645 | View Gene Set | 3.944e-05 | 31 | 0.004284 | 122 | mitochondrial nucleoid | amigo.geneontol... |
GO GO:0006626 | View Gene Set | 4.314e-05 | 32 | 0.004611 | 124 | protein targeting to mitochondrion | amigo.geneontol... |
GO GO:0070585 | View Gene Set | 4.314e-05 | 32 | 0.004611 | 124 | protein localization in mitochondrion | amigo.geneontol... |
GO GO:0051246 | View Gene Set | 4.482e-05 | 652 | 0.004752 | 126 | regulation of protein metabolic process | amigo.geneontol... |
GO GO:0000049 | View Gene Set | 4.975e-05 | 24 | 0.005233 | 127 | tRNA binding | amigo.geneontol... |
GO GO:0006903 | View Gene Set | 5.169e-05 | 22 | 0.005395 | 128 | vesicle targeting | amigo.geneontol... |
GO GO:0003954 | View Gene Set | 5.636e-05 | 44 | 0.005747 | 129 | NADH dehydrogenase activity | amigo.geneontol... |
GO GO:0008137 | View Gene Set | 5.636e-05 | 44 | 0.005747 | 129 | NADH dehydrogenase (ubiquinone) activity | amigo.geneontol... |
GO GO:0050136 | View Gene Set | 5.636e-05 | 44 | 0.005747 | 129 | NADH dehydrogenase (quinone) activity | amigo.geneontol... |
GO GO:0006368 | View Gene Set | 6.835e-05 | 49 | 0.006918 | 132 | RNA elongation from RNA polymerase II promoter | amigo.geneontol... |
GO GO:0031397 | View Gene Set | 6.911e-05 | 78 | 0.006942 | 133 | negative regulation of protein ubiquitination | amigo.geneontol... |
GO GO:0006119 | View Gene Set | 7.253e-05 | 104 | 0.007231 | 134 | oxidative phosphorylation | amigo.geneontol... |
GO GO:0031968 | View Gene Set | 7.778e-05 | 110 | 0.007698 | 135 | organelle outer membrane | amigo.geneontol... |
GO GO:0006886 | View Gene Set | 8.406e-05 | 439 | 0.008258 | 136 | intracellular protein transport | amigo.geneontol... |
GO GO:0006612 | View Gene Set | 0.0001004 | 36 | 0.009667 | 137 | protein targeting to membrane | amigo.geneontol... |
GO GO:0006613 | View Gene Set | 0.0001003 | 12 | 0.009667 | 137 | cotranslational protein targeting to membrane | amigo.geneontol... |
GO GO:0051536 | View Gene Set | 0.0001013 | 54 | 0.009667 | 137 | iron-sulfur cluster binding | amigo.geneontol... |
GO GO:0051540 | View Gene Set | 0.0001013 | 54 | 0.009667 | 137 | metal cluster binding | amigo.geneontol... |
GO GO:0044249 | View Gene Set | 0.0001036 | 4326 | 0.009818 | 141 | cellular biosynthetic process | amigo.geneontol... |
GO GO:0006446 | View Gene Set | 0.0001117 | 45 | 0.01051 | 142 | regulation of translational initiation | amigo.geneontol... |
GO GO:0006414 | View Gene Set | 0.00012 | 104 | 0.01121 | 143 | translational elongation | amigo.geneontol... |
GO GO:0007031 | View Gene Set | 0.0001296 | 22 | 0.01194 | 144 | peroxisome organization | amigo.geneontol... |
GO GO:0008033 | View Gene Set | 0.0001294 | 78 | 0.01194 | 144 | tRNA processing | amigo.geneontol... |
GO GO:0051650 | View Gene Set | 0.0001345 | 33 | 0.01231 | 146 | establishment of vesicle localization | amigo.geneontol... |
GO GO:0043021 | View Gene Set | 0.0001356 | 39 | 0.01233 | 147 | ribonucleoprotein binding | amigo.geneontol... |
GO GO:0044248 | View Gene Set | 0.0001672 | 1005 | 0.01509 | 148 | cellular catabolic process | amigo.geneontol... |
GO GO:0009060 | View Gene Set | 0.0001745 | 34 | 0.01554 | 149 | aerobic respiration | amigo.geneontol... |
GO GO:0048199 | View Gene Set | 0.0001742 | 12 | 0.01554 | 149 | vesicle targeting to from or within Golgi | amigo.geneontol... |
GO GO:0009058 | View Gene Set | 0.0001857 | 4436 | 0.01643 | 151 | biosynthetic process | amigo.geneontol... |
GO GO:0030134 | View Gene Set | 0.000187 | 16 | 0.01643 | 152 | ER to Golgi transport vesicle | amigo.geneontol... |
GO GO:0019867 | View Gene Set | 0.0001886 | 115 | 0.01647 | 153 | outer membrane | amigo.geneontol... |
GO GO:0030433 | View Gene Set | 0.0001929 | 27 | 0.01673 | 154 | ER-associated protein catabolic process | amigo.geneontol... |
GO GO:0006354 | View Gene Set | 0.0001986 | 53 | 0.01712 | 155 | RNA elongation | amigo.geneontol... |
GO GO:0016070 | View Gene Set | 0.0002227 | 2596 | 0.01907 | 156 | RNA metabolic process | amigo.geneontol... |
GO GO:0032269 | View Gene Set | 0.0002354 | 205 | 0.02004 | 157 | negative regulation of cellular protein metabolic process | amigo.geneontol... |
GO GO:0051188 | View Gene Set | 0.0002601 | 112 | 0.02185 | 158 | cofactor biosynthetic process | amigo.geneontol... |
GO GO:0044445 | View Gene Set | 0.0002586 | 148 | 0.02185 | 158 | cytosolic part | amigo.geneontol... |
GO GO:0007005 | View Gene Set | 0.0002779 | 139 | 0.02321 | 160 | mitochondrion organization | amigo.geneontol... |
GO GO:0016879 | View Gene Set | 0.0002812 | 273 | 0.02333 | 161 | ligase activity forming carbon-nitrogen bonds | amigo.geneontol... |
GO GO:0008380 | View Gene Set | 0.0003374 | 300 | 0.02783 | 162 | RNA splicing | amigo.geneontol... |
GO GO:0016881 | View Gene Set | 0.0003445 | 245 | 0.02824 | 163 | acid-amino acid ligase activity | amigo.geneontol... |
GO GO:0016558 | View Gene Set | 0.0003913 | 10 | 0.03188 | 164 | protein import into peroxisome matrix | amigo.geneontol... |
GO GO:0048194 | View Gene Set | 0.0004096 | 10 | 0.03277 | 165 | Golgi vesicle budding | amigo.geneontol... |
GO GO:0048200 | View Gene Set | 0.0004096 | 10 | 0.03277 | 165 | Golgi transport vesicle coating | amigo.geneontol... |
GO GO:0048205 | View Gene Set | 0.0004096 | 10 | 0.03277 | 165 | COPI coating of Golgi vesicle | amigo.geneontol... |
GO GO:0007006 | View Gene Set | 0.0004205 | 29 | 0.03344 | 168 | mitochondrial membrane organization | amigo.geneontol... |
GO GO:0044085 | View Gene Set | 0.0004256 | 1167 | 0.03365 | 169 | cellular component biogenesis | amigo.geneontol... |
GO GO:0051248 | View Gene Set | 0.0004287 | 218 | 0.03369 | 170 | negative regulation of protein metabolic process | amigo.geneontol... |
GO GO:0005744 | View Gene Set | 0.0004485 | 12 | 0.03504 | 171 | mitochondrial inner membrane presequence translocase complex | amigo.geneontol... |
GO GO:0016591 | View Gene Set | 0.0004739 | 77 | 0.03681 | 172 | DNA-directed RNA polymerase II holoenzyme | amigo.geneontol... |
GO GO:0010608 | View Gene Set | 0.0004927 | 247 | 0.03805 | 173 | posttranscriptional regulation of gene expression | amigo.geneontol... |
GO GO:0043574 | View Gene Set | 0.000543 | 15 | 0.04169 | 174 | peroxisomal transport | amigo.geneontol... |
GO GO:0016417 | View Gene Set | 0.0005516 | 6 | 0.04211 | 175 | S-acyltransferase activity | amigo.geneontol... |
GO GO:0005852 | View Gene Set | 0.0005633 | 14 | 0.04276 | 176 | eukaryotic translation initiation factor 3 complex | amigo.geneontol... |
GO GO:0006891 | View Gene Set | 0.000609 | 19 | 0.04571 | 177 | intra-Golgi vesicle-mediated transport | amigo.geneontol... |
GO GO:0070727 | View Gene Set | 0.0006083 | 503 | 0.04571 | 177 | cellular macromolecule localization | amigo.geneontol... |
GO GO:0051649 | View Gene Set | 0.0006363 | 1116 | 0.04749 | 179 | establishment of localization in cell | amigo.geneontol... |
GO GO:0000209 | View Gene Set | 0.0006483 | 42 | 0.04812 | 180 | protein polyubiquitination | amigo.geneontol... |
Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
Broad chr19p13 | View Gene Set | 0.0001114 | 514 | 0.03633 | 1 | Genes in cytogenetic band chr19p13 | www.broad.mit.e... |
Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
Broad DIAZ_CHRONIC_MEYLOGENOUS_LEUKEMIA_UP | View Gene Set | 1.186e-33 | 1353 | 2.836e-30 | 1 | Genes up-regulated in CD34+ [Gene ID=947] cells isolated from bone marrow of CML (chronic myelogenous leukemia) patients compared to those from normal donors. | www.broad.mit.e... |
Broad KRIGE_RESPONSE_TO_TOSEDOSTAT_24HR_DN | View Gene Set | 8.867e-25 | 920 | 1.061e-21 | 2 | Genes down-regulated in HL-60 cells (acute promyelocytic leukemia APL) after treatment with the aminopeptidase inhibitor tosedostat (CHR-2797) [PubChem=15547703] for 24 h. | www.broad.mit.e... |
Broad MOOTHA_MITOCHONDRIA | View Gene Set | 1.348e-20 | 433 | 1.075e-17 | 3 | Mitochondrial genes | www.broad.mit.e... |
Broad MOOTHA_HUMAN_MITODB_6_2002 | View Gene Set | 3.272e-19 | 420 | 1.957e-16 | 4 | Mitochondrial genes; based on literature and sequence annotation resources and converted to Affymetrix HG-U133A probe sets. | www.broad.mit.e... |
Broad KRIGE_RESPONSE_TO_TOSEDOSTAT_6HR_DN | View Gene Set | 2.066e-18 | 832 | 9.885e-16 | 5 | Genes down-regulated in HL-60 cells (acute promyelocytic leukemia APL) after treatment with the aminopeptidase inhibitor tosedostat (CHR-2797) [PubChem=15547703] for 6 h. | www.broad.mit.e... |
Broad SHEN_SMARCA2_TARGETS_UP | View Gene Set | 1.723e-16 | 406 | 6.867e-14 | 6 | Genes whose expression positively correlated with that of SMARCA2 [Gene ID=6595] in prostate cancer samples. | www.broad.mit.e... |
Broad CAIRO_HEPATOBLASTOMA_CLASSES_UP | View Gene Set | 6.346e-15 | 577 | 2.169e-12 | 7 | Genes up-regulated in robust Cluster 2 (rC2) of hepatoblastoma samples compared to those in the robust Cluster 1 (rC1). | www.broad.mit.e... |
Broad BENPORATH_MYC_MAX_TARGETS | View Gene Set | 4.878e-14 | 768 | 1.458e-11 | 8 | Set 'Myc targets2': targets of c-Myc [Gene ID=4609] and Max [Gene ID=4149] identified by ChIP on chip in a Burkitt???s lymphoma cell line; overlap set. | www.broad.mit.e... |
Broad LIU_SOX4_TARGETS_DN | View Gene Set | 6.684e-14 | 297 | 1.776e-11 | 9 | Genes down-regulated in LNCaP cells (prostate cancer) by overexpression of SOX4 [Gene ID=6659] and up-regulated by its RNAi knockdown. | www.broad.mit.e... |
Broad ELVIDGE_HYPOXIA_DN | View Gene Set | 2.342e-13 | 136 | 5.603e-11 | 10 | Genes down-regulated in MCF7 cells (breast cancer) under hypoxia conditions. | www.broad.mit.e... |
Broad WONG_MITOCHONDRIA_GENE_MODULE | View Gene Set | 3.282e-13 | 208 | 7.136e-11 | 11 | Genes that comprise the mitochondria gene module | www.broad.mit.e... |
Broad DANG_BOUND_BY_MYC | View Gene Set | 4.637e-13 | 1045 | 9.244e-11 | 12 | Genes whose promoters are bound by MYC [Gene ID=4609] according to MYC Target Gene Database. | www.broad.mit.e... |
Broad SCHLOSSER_MYC_TARGETS_REPRESSED_BY_SERUM | View Gene Set | 7.106e-13 | 154 | 1.307e-10 | 13 | Cluster 7: genes up-regulated in B493-6 cells (B lymphocytes) by MYC [Gene ID=4609] and down-regulated by the combination of MYC and serum. | www.broad.mit.e... |
Broad BLUM_RESPONSE_TO_SALIRASIB_UP | View Gene Set | 2.086e-12 | 240 | 3.564e-10 | 14 | Selected genes up-regulated in response to the Ras inhibitor salirasib [PubChem=5469318] in a panel of cancer cell lines with constantly active HRAS [Gene ID=3265]. | www.broad.mit.e... |
Broad MOOTHA_PGC | View Gene Set | 3.366e-11 | 329 | 5.367e-09 | 15 | Genes up-regulated in differentiating C2C12 cells (myoblasts) upon expression of PPARGC1A [Gene ID=10891] off an adenoviral vector. | www.broad.mit.e... |
Broad ACEVEDO_LIVER_TUMOR_VS_NORMAL_ADJACENT_TISSUE_UP | View Gene Set | 4.29e-11 | 806 | 6.413e-09 | 16 | Genes up-regulated in liver tumor compared to the normal adjacent tissue. | www.broad.mit.e... |
Broad GRADE_COLON_CANCER_UP | View Gene Set | 1.32e-10 | 711 | 1.857e-08 | 17 | Up-regulated genes in colon carcinoma tumors compared to the matched normal mucosa samples. | www.broad.mit.e... |
Broad GARY_CD5_TARGETS_UP | View Gene Set | 4.136e-10 | 463 | 5.496e-08 | 18 | Genes up-regulated in Daudi cells (B lymphocytes) stably expressing CD5 [Gene ID=921] off a plasmid vector. | www.broad.mit.e... |
Broad PELLICCIOTTA_HDAC_IN_ANTIGEN_PRESENTATION_UP | View Gene Set | 8.65e-10 | 63 | 1.089e-07 | 19 | Antigen processing and presentation genes up-regulated in JY cells (B lymphocytes) treated with TSA [PubChem=5562]. | www.broad.mit.e... |
Broad YAO_TEMPORAL_RESPONSE_TO_PROGESTERONE_CLUSTER_14 | View Gene Set | 9.899e-10 | 131 | 1.184e-07 | 20 | Genes co-regulated in uterus during a time course response to progesterone [PubChem=5994]: SOM cluster 14. | www.broad.mit.e... |
Broad KRIGE_RESPONSE_TO_TOSEDOSTAT_6HR_UP | View Gene Set | 1.391e-09 | 869 | 1.584e-07 | 21 | Genes up-regulated in HL-60 cells (acute promyelocytic leukemia APL) after treatment with the aminopeptidase inhibitor tosedostat (CHR-2797) [PubChem=15547703] for 6 h. | www.broad.mit.e... |
Broad YAO_TEMPORAL_RESPONSE_TO_PROGESTERONE_CLUSTER_17 | View Gene Set | 4.024e-09 | 165 | 4.375e-07 | 22 | Genes co-regulated in uterus during a time course response to progesterone [PubChem=5994]: SOM cluster 17. | www.broad.mit.e... |
Broad WEI_MYCN_TARGETS_WITH_E_BOX | View Gene Set | 1.024e-08 | 757 | 1.065e-06 | 23 | Genes whose promoters contain E-box motifs and whose expression changed in MYCN-3 cells (neuroblastoma) upon induction of MYCN [Gene ID=4613]. | www.broad.mit.e... |
Broad STEIN_ESRRA_TARGETS_UP | View Gene Set | 1.207e-08 | 368 | 1.203e-06 | 24 | Genes up-regulated by ESRRA [Gene ID=2101] only. | www.broad.mit.e... |
Broad STEIN_ESRRA_TARGETS | View Gene Set | 1.787e-08 | 508 | 1.71e-06 | 25 | Genes regulated by ESRRA [Gene ID=2101] in MCF-7 cells (breast cancer). | www.broad.mit.e... |
Broad BORCZUK_MALIGNANT_MESOTHELIOMA_UP | View Gene Set | 2.173e-08 | 290 | 2e-06 | 26 | Genes up-regulated in biphasic (mixed) vs epithelial subtypes of malignant peritoneal mesothelioma. | www.broad.mit.e... |
Broad SCHLOSSER_MYC_AND_SERUM_RESPONSE_SYNERGY | View Gene Set | 4.849e-08 | 31 | 4.296e-06 | 27 | Cluster 3: genes strongly up-regulated in B493-6 cells (B lymphocytes) by a combination of MYC [Gene ID=4609] and serum but not by each of them alone. | www.broad.mit.e... |
Broad STARK_PREFRONTAL_CORTEX_22Q11_DELETION_DN | View Gene Set | 6.095e-08 | 437 | 5.207e-06 | 28 | Genes down-regulated in prefrontal cortex (PFC) of mice carrying a hemizygotic microdeletion in the 22q11.2 region. | www.broad.mit.e... |
Broad MILI_PSEUDOPODIA_CHEMOTAXIS_DN | View Gene Set | 7.348e-08 | 430 | 6.061e-06 | 29 | Transcripts depleted in pseudopodia of NIH/3T3 cells (fibroblast) in response to the chemotactic migration stimulus by lysophosphatidic acid (LPA) [PubChem=3988]. | www.broad.mit.e... |
Broad MOOTHA_VOXPHOS | View Gene Set | 1.052e-07 | 82 | 8.389e-06 | 30 | Genes involved in oxidative phosphorylation; based on literature and sequence annotation resources and converted to Affymetrix HG-U133A probe sets. | www.broad.mit.e... |
Broad MILI_PSEUDOPODIA_HAPTOTAXIS_DN | View Gene Set | 1.918e-07 | 607 | 1.48e-05 | 31 | Transcripts depleted from pseudopodia of NIH/3T3 cells (fibroblast) in response to haptotactic migratory stimulus by fibronectin FN1 [Gene ID=2335]. | www.broad.mit.e... |
Broad BLALOCK_ALZHEIMERS_DISEASE_DN | View Gene Set | 2.117e-07 | 1209 | 1.583e-05 | 32 | Genes down-regulated in brain from patients with Alzheimer's disease. | www.broad.mit.e... |
Broad PUJANA_BRCA1_PCC_NETWORK | View Gene Set | 3.945e-07 | 1582 | 2.859e-05 | 33 | Genes constituting the BRCA1-PCC network of transcripts whose expression positively correlated (Pearson correlation coefficient PCC >= 0.4) with that of BRCA1 [Gene ID=672] across a compendium of normal tissues. | www.broad.mit.e... |
Broad GARY_CD5_TARGETS_DN | View Gene Set | 5.964e-07 | 415 | 4.196e-05 | 34 | Genes down-regulated in Daudi cells (B lymphocytes) stably expressing CD5 [Gene ID=921] off a plasmid vector. | www.broad.mit.e... |
Broad ELVIDGE_HIF1A_TARGETS_UP | View Gene Set | 1.006e-06 | 64 | 6.879e-05 | 35 | Genes up-regulated in MCF7 cells (breast cancer) after knockdown of HIF1A [Gene ID=3091] by RNAi. | www.broad.mit.e... |
Broad RAMALHO_STEMNESS_UP | View Gene Set | 1.075e-06 | 192 | 7.143e-05 | 36 | Genes enriched in embryonic neural and hematopoietic stem cells. | www.broad.mit.e... |
Broad SCHLOSSER_SERUM_RESPONSE_AUGMENTED_BY_MYC | View Gene Set | 1.164e-06 | 101 | 7.41e-05 | 37 | Cluster 2: genes up-regulated in B493-6 cells (B lymphocytes) by serum alone or in combination with MYC [Gene ID=4609] but not by MYC alone. | www.broad.mit.e... |
Broad YAO_TEMPORAL_RESPONSE_TO_PROGESTERONE_CLUSTER_7 | View Gene Set | 1.177e-06 | 65 | 7.41e-05 | 37 | Genes co-regulated in uterus during a time course response to progesterone [PubChem=5994]: SOM cluster 7. | www.broad.mit.e... |
Broad SCHLOSSER_SERUM_RESPONSE_DN | View Gene Set | 1.583e-06 | 666 | 9.564e-05 | 39 | Cluster 4: genes down-regulated in B493-6 cells (B lymphocytes) upon serum stimulation but not affected by MYC [Gene ID=4609]. | www.broad.mit.e... |
Broad SPIELMAN_LYMPHOBLAST_EUROPEAN_VS_ASIAN_DN | View Gene Set | 1.599e-06 | 571 | 9.564e-05 | 39 | Genes down-regulated in lymphoblastoid cells from the European population compared to those from the Asian population. | www.broad.mit.e... |
Broad SCHLOSSER_MYC_TARGETS_AND_SERUM_RESPONSE_UP | View Gene Set | 2.716e-06 | 45 | 0.0001584 | 41 | Cluster 5: genes up-regulated in B493-6 cells (B lymphocytes) by MYC [Gene ID=4609] alone or in combination with serum but not by serum alone. | www.broad.mit.e... |
Broad AGUIRRE_PANCREATIC_CANCER_COPY_NUMBER_UP | View Gene Set | 3.123e-06 | 288 | 0.0001779 | 42 | Up-regulated genes whose expression correlates with copy number gains in pancreatic adenocarcinoma cell lines and primary tumor specimens. | www.broad.mit.e... |
Broad MORI_PLASMA_CELL_UP | View Gene Set | 3.832e-06 | 37 | 0.0002131 | 43 | Up-regulated genes in the B lymphocyte developmental signature based on expression profiling of lymphomas from the Emu-myc transgenic mice: plasma cell. | www.broad.mit.e... |
Broad TARTE_PLASMA_CELL_VS_B_LYMPHOCYTE_UP | View Gene Set | 6.238e-06 | 76 | 0.0003391 | 44 | Genes up-regulated in plasma cells compared with B lymphocytes. | www.broad.mit.e... |
Broad TIEN_INTESTINE_PROBIOTICS_24HR_DN | View Gene Set | 1.388e-05 | 208 | 0.0007377 | 45 | Genes down-regulated in Caco-2 cells (intestinal epithelium) after coculture with the probiotic bacteria L. casei for 24h. | www.broad.mit.e... |
Broad WANG_LMO4_TARGETS_DN | View Gene Set | 2.129e-05 | 327 | 0.001107 | 46 | Genes down-regulated in MCF7 cells (breast cancer) engineered to conditionally express LMO4 [Gene ID=8543] by a Tet Off system. | www.broad.mit.e... |
Broad DACOSTA_UV_RESPONSE_VIA_ERCC3_UP | View Gene Set | 2.42e-05 | 301 | 0.001231 | 47 | Genes up-regulated in fibroblasts expressing mutant forms of ERCC3 [Gene ID=2071] after UV irradiation. | www.broad.mit.e... |
Broad SESTO_RESPONSE_TO_UV_C0 | View Gene Set | 2.762e-05 | 106 | 0.001376 | 48 | Cluster 0: genes changed in primary keratinocytes by UVB irradiation. | www.broad.mit.e... |
Broad DAIRKEE_TERT_TARGETS_UP | View Gene Set | 3.13e-05 | 317 | 0.001528 | 49 | Genes up-regulated in non-spontaneously immortalizing (NSI) primary breast cancer tumor cultures upon expression of TERT [Gene ID=7015] off a retroviral vector. | www.broad.mit.e... |
Broad PENG_GLUTAMINE_DEPRIVATION_DN | View Gene Set | 3.248e-05 | 84 | 0.001554 | 50 | Genes down-regulated in BJAB cells (B-lymphoma) after glutamine [PubChem=738] deprivation. | www.broad.mit.e... |
Broad FLECHNER_PBL_KIDNEY_TRANSPLANT_OK_VS_DONOR_UP | View Gene Set | 3.372e-05 | 147 | 0.001582 | 51 | Genes upreglated in peripheral blood lymphocytes (PBL) from patients with well functioning kidneys more than 1-year post transplant compared to those from normal living kidney donors. | www.broad.mit.e... |
Broad YAO_TEMPORAL_RESPONSE_TO_PROGESTERONE_CLUSTER_13 | View Gene Set | 3.754e-05 | 158 | 0.001727 | 52 | Genes co-regulated in uterus during a time course response to progesterone [PubChem=5994]: SOM cluster 13. | www.broad.mit.e... |
Broad JAZAERI_BREAST_CANCER_BRCA1_VS_BRCA2_UP | View Gene Set | 4.24e-05 | 45 | 0.001913 | 53 | Up-regulated genes distinguishing between breast cancer tumors with mutated BRCA1 [Gene ID=672] from those with mutated BRCA2 [Gene ID=675]. | www.broad.mit.e... |
Broad ACEVEDO_LIVER_CANCER_UP | View Gene Set | 5.327e-05 | 915 | 0.00236 | 54 | Genes up-regulated in hepatocellular carcinoma (HCC) compared to normal liver samples. | www.broad.mit.e... |
Broad GOLDRATH_HOMEOSTATIC_PROLIFERATION | View Gene Set | 6.139e-05 | 154 | 0.00267 | 55 | Up-regulated in CD8+ [Gene ID=925] T lymphocytes undergoing homeostatic proliferation (HP) versus the naive cells; these genes are not up-regulated versus effector or memory cell population. | www.broad.mit.e... |
Broad MILI_PSEUDOPODIA_HAPTOTAXIS_UP | View Gene Set | 6.489e-05 | 452 | 0.002772 | 56 | Transcripts enriched in pseudopodia of NIH/3T3 cells (fibroblast) in response to haptotactic migratory stimulus by fibronectin FN1 [Gene ID=2335]. | www.broad.mit.e... |
Broad BOYAULT_LIVER_CANCER_SUBCLASS_G3_UP | View Gene Set | 8.707e-05 | 184 | 0.003654 | 57 | Up-regulated genes in hepatocellular carcinoma (HCC) subclass G3 defined by unsupervised clustering. | www.broad.mit.e... |
Broad PENG_RAPAMYCIN_RESPONSE_DN | View Gene Set | 9.272e-05 | 69 | 0.003824 | 58 | Genes down-regulated in BJUB cells (B-lymphoma) in response to rapamycin [PubChem=6610346] treatment. | www.broad.mit.e... |
Broad YAO_TEMPORAL_RESPONSE_TO_PROGESTERONE_CLUSTER_11 | View Gene Set | 0.0001119 | 93 | 0.004537 | 59 | Genes co-regulated in uterus during a time course response to progesterone [PubChem=5994]: SOM cluster 11. | www.broad.mit.e... |
Broad GINESTIER_BREAST_CANCER_20Q13_AMPLIFICATION_UP | View Gene Set | 0.0001182 | 104 | 0.004711 | 60 | Genes up-regulated in metastatic breast cancer tumors having type 2 amplification in the 20q13 region; involves MYBL2 STK6 and ZNF217 [Gene ID=4605 6790 7764] | www.broad.mit.e... |
Broad DING_LUNG_CANCER_EXPRESSION_BY_COPY_NUMBER | View Gene Set | 0.0001276 | 91 | 0.005003 | 61 | The lung adenocarcinoma TSP (tumor sequencing project) genes showing strong correlation between DNA copy number variation and gene expression. | www.broad.mit.e... |
Broad CHNG_MULTIPLE_MYELOMA_HYPERPLOID_UP | View Gene Set | 0.0001309 | 51 | 0.00505 | 62 | Protein biosynthesis transport or catabolism genes up-regulated in hyperploid multiple myeloma (MM) compared to the non-hyperploid MM samples. | www.broad.mit.e... |
Broad MOOTHA_TCA | View Gene Set | 0.0001482 | 15 | 0.005626 | 63 | Tricarboxylic acid related genes; based on literature and sequence annotation resources and converted to Affymetrix HG-U133A probe sets. | www.broad.mit.e... |
Broad LOCKWOOD_AMPLIFIED_IN_LUNG_CANCER | View Gene Set | 0.000158 | 167 | 0.005905 | 64 | Overexpressed genes with amplified copy number across 27 non-small cell lung cancer (NSCLC) cell lines. | www.broad.mit.e... |
Broad GINESTIER_BREAST_CANCER_ZNF217_AMPLIFIED_DN | View Gene Set | 0.0001762 | 308 | 0.006483 | 65 | Genes down-regulated in non-metastatic breast cancer tumors having type 1 amplification in the 20q13 region; involves ZNF217 [Gene ID=7764] locus only. | www.broad.mit.e... |
Broad DOUGLAS_BMI1_TARGETS_UP | View Gene Set | 0.0001805 | 497 | 0.006543 | 66 | Genes up-regulated in A4573 cells (Ewing's sarcoma ESFT) after knockdown of BMI1 [Gene ID=648] by RNAi. | www.broad.mit.e... |
Broad FLECHNER_BIOPSY_KIDNEY_TRANSPLANT_REJECTED_VS_OK_DN | View Gene Set | 0.0001897 | 532 | 0.006774 | 67 | Genes differentially expressed in kidney biopsies from patients with acute transplant rejection compared to the biopsies from patients with well functioning kidneys more than 1-year post transplant. | www.broad.mit.e... |
Broad IVANOVA_HEMATOPOIESIS_EARLY_PROGENITOR | View Gene Set | 0.0002088 | 100 | 0.007345 | 68 | Genes in the expression cluster 'Early Progenitors Shared': up-regulated in hematopoietic progenitors from adult bone marrow and from fetal liver. | www.broad.mit.e... |
Broad RODRIGUES_THYROID_CARCINOMA_POORLY_DIFFERENTIATED_UP | View Gene Set | 0.0002358 | 589 | 0.008176 | 69 | Genes up-regulated in poorly differentiated thyroid carcinoma (PDTC) compared to normal thyroid tissue. | www.broad.mit.e... |
Broad SHEPARD_CRUSH_AND_BURN_MUTANT_UP | View Gene Set | 0.0002993 | 135 | 0.01001 | 70 | Human orthologs of genes up-regulated in the crb ('crash and burn') zebrafish mutant that represents a loss-of-function mutation in BMYB [Gene ID=4605]. | www.broad.mit.e... |
Broad ELLWOOD_MYC_TARGETS_DN | View Gene Set | 0.0003048 | 34 | 0.01001 | 70 | Genes down-regulated in transgenic mice expressing human MYC [Gene ID=4609] in prostate. | www.broad.mit.e... |
Broad HSIAO_HOUSEKEEPING_GENES | View Gene Set | 0.0003054 | 384 | 0.01001 | 70 | Housekeeping genes identified as expressed across 19 normal tissues. | www.broad.mit.e... |
Broad ROME_INSULIN_TARGETS_IN_MUSCLE_UP | View Gene Set | 0.000305 | 89 | 0.01001 | 70 | Genes up-regulated by 3 h of euglycemic hyperinsulinemic clamp in the vastus lateralis muscle of healthy lean subjects. | www.broad.mit.e... |
Broad WONG_PROTEASOME_GENE_MODULE | View Gene Set | 0.0003345 | 46 | 0.01081 | 74 | Genes that comprise the proteasome gene module | www.broad.mit.e... |
Broad LUI_THYROID_CANCER_CLUSTER_3 | View Gene Set | 0.0003492 | 26 | 0.01114 | 75 | Cluster 3: genes with similar expression profiles across follicular thyrorid carcinoma (FTC) samples; genes in this cluster correlated well with the presence of PAX8-PPARG [Gene ID=7849 5468] fusion protein. | www.broad.mit.e... |
Broad CREIGHTON_AKT1_SIGNALING_VIA_MTOR_UP | View Gene Set | 0.0004276 | 34 | 0.01346 | 76 | Genes in the AKT1 [Gene ID=207] pathway which are independent of MTOR [Gene ID=2475] insensitive to RAD001 (everolimus) [PubChem=6442177]. | www.broad.mit.e... |
Broad PENG_LEUCINE_DEPRIVATION_DN | View Gene Set | 0.0005242 | 50 | 0.01629 | 77 | Genes down-regulated in BJAB cells (B-lymphoma) after leucine [PubChem=857] deprivation. | www.broad.mit.e... |
Broad NOUZOVA_TRETINOIN_AND_H4_ACETYLATION | View Gene Set | 0.0005543 | 124 | 0.017 | 78 | Genes whose CpG islands showed greatly increased histone H4 acetylation in NB4 cells (acute promyelocytic leukemia APL) upon treatment with tretinoin [PubChem=5538]. | www.broad.mit.e... |
Broad SENESE_HDAC1_TARGETS_UP | View Gene Set | 0.0005851 | 427 | 0.01772 | 79 | Genes up-regulated in U2OS cells (osteosarcoma) upon knockdown of HDAC1 [Gene ID=3065] by RNAi. | www.broad.mit.e... |
Broad MANALO_HYPOXIA_DN | View Gene Set | 0.0006517 | 276 | 0.01949 | 80 | Genes down-regulated in response to both hypoxia and overexpression of an active form of HIF1A [Gene ID=3091]. | www.broad.mit.e... |
Broad ENK_UV_RESPONSE_KERATINOCYTE_DN | View Gene Set | 0.0006948 | 475 | 0.02002 | 81 | Genes down-regulated in NHEK cells (normal epidermal keratinocytes) after UVB irradiation. | www.broad.mit.e... |
Broad LASTOWSKA_NEUROBLASTOMA_COPY_NUMBER_UP | View Gene Set | 0.0006883 | 168 | 0.02002 | 81 | Genes with copy number gains in primary neuroblastoma tumors. | www.broad.mit.e... |
Broad LU_AGING_BRAIN_UP | View Gene Set | 0.000679 | 146 | 0.02002 | 81 | Genes up-regulated in postmortem brain frontal cortex samples from old subjects compared to those from the young ones. | www.broad.mit.e... |
Broad MOREAUX_MULTIPLE_MYELOMA_BY_TACI_DN | View Gene Set | 0.0007976 | 121 | 0.02271 | 84 | Genes distinguishing in multiple myeloma (MM) samples with lower expression of TACI [Gene ID=23495]. | www.broad.mit.e... |
Broad NIKOLSKY_BREAST_CANCER_22Q13_AMPLICON | View Gene Set | 0.0008262 | 17 | 0.02325 | 85 | Genes within amplicon 22q13 identified in a copy number alterations study of 191 breast tumor samples. | www.broad.mit.e... |
Broad LASTOWSKA_NEUROBLASTOMA_COPY_NUMBER_DN | View Gene Set | 0.0008617 | 742 | 0.02369 | 86 | Genes with copy number losses in primary neuroblastoma tumors. | www.broad.mit.e... |
Broad GUTIERREZ_MULTIPLE_MYELOMA_DN | View Gene Set | 0.0008584 | 34 | 0.02369 | 86 | Genes exclusively down-regulated in plasma cells from MM (multiple myeloma) patients but with a similiar expression pattern in the normal cells and in the cells from WM (Waldenstroem's macroblobulinemia) patients. | www.broad.mit.e... |
Broad GARGALOVIC_RESPONSE_TO_OXIDIZED_PHOSPHOLIPIDS_RED_UP | View Gene Set | 0.001128 | 17 | 0.03009 | 88 | Genes from the red module which are up-regulated in HAEC cells (primary aortic endothelium) after exposure to the oxidized 1-palmitoyl-2-arachidonyl-sn-3-glycerophosphorylcholine (oxPAPC). | www.broad.mit.e... |
Broad SCHLOSSER_MYC_TARGETS_AND_SERUM_RESPONSE_DN | View Gene Set | 0.001119 | 46 | 0.03009 | 88 | Cluster 6: genes down-regulated in B493-6 cells (B lymphocytes) by MYC [Gene ID=4609] in combination with serum but not affected by serum alone; they are also up-regulated by MYC alone. | www.broad.mit.e... |
Broad SCHUHMACHER_MYC_TARGETS_UP | View Gene Set | 0.001132 | 68 | 0.03009 | 88 | Genes up-regulated in P493-6 cells (Burkitt's lymphoma) induced to express MYC [Gene ID=4609]. | www.broad.mit.e... |
Broad BILD_MYC_ONCOGENIC_SIGNATURE | View Gene Set | 0.001173 | 187 | 0.03082 | 91 | Genes selected in supervised analyses to discriminate cells expressing c-Myc [Gene ID=4609] from control cells expressing GFP. | www.broad.mit.e... |
Broad TIEN_INTESTINE_PROBIOTICS_6HR_DN | View Gene Set | 0.001244 | 160 | 0.03164 | 92 | Genes down-regulated in Caco-2 cells (intestinal epithelium) after coculture with the probiotic bacteria L. casei for 6h. | www.broad.mit.e... |
Broad AMIT_EGF_RESPONSE_480_HELA | View Gene Set | 0.001243 | 159 | 0.03164 | 92 | Genes whose expression peaked at 480 min after stimulation of HeLa cells with EGF [Gene ID=1950]. | www.broad.mit.e... |
Broad BYSTRYKH_HEMATOPOIESIS_STEM_CELL_QTL_TRANS | View Gene Set | 0.001228 | 805 | 0.03164 | 92 | Transcripts in hematopoietic stem cells (HSC) which are trans-regulated (i.e. modulated by a QTL (quantitative trait locus) not in a close proximity to the gene). | www.broad.mit.e... |
Broad ACEVEDO_METHYLATED_IN_LIVER_CANCER_UP | View Gene Set | 0.001286 | 2268 | 0.03238 | 95 | Genes whose DNA is hypo-methylated in hepatocellular carcinoma (HCC) compared to normal liver. | www.broad.mit.e... |
Broad PARENT_MTOR_SIGNALING_UP | View Gene Set | 0.001341 | 541 | 0.03277 | 96 | Genes up-regulated in HepaRG cells (liver cancer) expressing constituvely active form of MTOR [Gene ID=2475]. | www.broad.mit.e... |
Broad PENG_LEUCINE_DEPRIVATION_UP | View Gene Set | 0.001343 | 22 | 0.03277 | 96 | Genes up-regulated in BJAB cells (B-lymphoma) after leucine [PubChem=857] deprivation. | www.broad.mit.e... |
Broad CHAUHAN_RESPONSE_TO_METHOXYESTRADIOL_UP | View Gene Set | 0.001333 | 47 | 0.03277 | 96 | Genes up-regulated by 2-methoxyestradiol (2ME2) [PubChem=1573] in the MM.1S cell line (multiple myeloma) sensitive to dexamethasone [PubChem=5743]. | www.broad.mit.e... |
Broad ENK_UV_RESPONSE_KERATINOCYTE_UP | View Gene Set | 0.001424 | 517 | 0.0344 | 99 | Genes up-regulated in NHEK cells (normal epidermal keratinocytes) after UVB irradiation. | www.broad.mit.e... |
Broad WELCSH_BRCA1_TARGETS_1_UP | View Gene Set | 0.001452 | 171 | 0.03472 | 100 | Upregulated by induction of exogenous BRCA1 in EcR-293 cells | www.broad.mit.e... |
Broad PASQUALUCCI_LYMPHOMA_BY_GC_STAGE_UP | View Gene Set | 0.001516 | 257 | 0.03555 | 101 | Genes up-regulated in post-GC BCL6 [Gene ID=604] dependent B cell non-Hodgkin's lymphoma (B-NHL) vs MYC [Gene ID=4609] driven pre-GC lymphoma; GC = germinal center. | www.broad.mit.e... |
Broad KAYO_AGING_MUSCLE_DN | View Gene Set | 0.001514 | 107 | 0.03555 | 101 | Downregulated in the vastus lateralis muscle of aged vs young adult rhesus monkeys | www.broad.mit.e... |
Broad NAGY_PCAF_COMPONENTS_HUMAN | View Gene Set | 0.001563 | 5 | 0.03629 | 103 | Composition of the 2 MDa human PCAF complex. | www.broad.mit.e... |
Broad MYLLYKANGAS_AMPLIFICATION_HOT_SPOT_22 | View Gene Set | 0.001623 | 11 | 0.03733 | 104 | Amplification hot spot 22: colocolized fragile sites and cancer genes in the 22q11.1-q13s region. | www.broad.mit.e... |
Broad KIM_GASTRIC_CANCER_CHEMOSENSITIVITY | View Gene Set | 0.001883 | 97 | 0.04291 | 105 | Genes up-regulated in gastric cancer patients refractory to chemotherapy treatment with 5-fluorouracil and cisplatin [PubChem=3385 2767] compared to the sensitive state. | www.broad.mit.e... |
Broad PUJANA_CHEK2_PCC_NETWORK | View Gene Set | 0.002061 | 744 | 0.04651 | 106 | Genes constituting the CHEK2-PCC network of transcripts whose expression positively correlates (Pearson correlation coefficient PCC >= 0.4) with that of CHEK2 [Gene ID=11200]. | www.broad.mit.e... |
Broad OSMAN_BLADDER_CANCER_UP | View Gene Set | 0.002187 | 387 | 0.04889 | 107 | Genes up-regulated in blood samples from bladder cancer patients. | www.broad.mit.e... |
Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
Broad BIOCARTA_PROTEASOME_PATHWAY | View Gene Set | 4.91e-05 | 19 | 0.01065 | 1 | Proteasome Complex | www.broad.mit.e... |
Broad BIOCARTA_MTOR_PATHWAY | View Gene Set | 0.0001565 | 23 | 0.01132 | 2 | mTOR Signaling Pathway | www.broad.mit.e... |
Broad BIOCARTA_IGF1MTOR_PATHWAY | View Gene Set | 0.0001499 | 20 | 0.01132 | 2 | Skeletal muscle hypertrophy is regulated via AKT/mTOR pathway | www.broad.mit.e... |
Broad BIOCARTA_IGF1R_PATHWAY | View Gene Set | 0.0003078 | 23 | 0.0167 | 4 | Multiple antiapoptotic pathways from IGF-1R signaling lead to BAD phosphorylation | www.broad.mit.e... |
Broad BIOCARTA_INTEGRIN_PATHWAY | View Gene Set | 0.0007593 | 38 | 0.03295 | 5 | Integrin Signaling Pathway | www.broad.mit.e... |
Broad BIOCARTA_EIF4_PATHWAY | View Gene Set | 0.0009488 | 24 | 0.03431 | 6 | Regulation of eIF4e and p70 S6 Kinase | www.broad.mit.e... |
Broad BIOCARTA_EIF_PATHWAY | View Gene Set | 0.001335 | 16 | 0.04137 | 7 | Eukaryotic protein translation | www.broad.mit.e... |
Broad BIOCARTA_HCMV_PATHWAY | View Gene Set | 0.001573 | 17 | 0.04268 | 8 | Human Cytomegalovirus and Map Kinase Pathways | www.broad.mit.e... |
Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
Broad KEGG_OXIDATIVE_PHOSPHORYLATION | View Gene Set | 1.073e-06 | 135 | 6.394e-05 | 1 | Oxidative phosphorylation | www.broad.mit.e... |
Broad KEGG_AMINOACYL_TRNA_BIOSYNTHESIS | View Gene Set | 1.375e-06 | 41 | 6.394e-05 | 1 | Aminoacyl-tRNA biosynthesis | www.broad.mit.e... |
Broad KEGG_UBIQUITIN_MEDIATED_PROTEOLYSIS | View Gene Set | 7.478e-07 | 138 | 6.394e-05 | 1 | Ubiquitin mediated proteolysis | www.broad.mit.e... |
Broad KEGG_PARKINSONS_DISEASE | View Gene Set | 5.082e-07 | 133 | 6.394e-05 | 1 | Parkinson's disease | www.broad.mit.e... |
Broad KEGG_HUNTINGTONS_DISEASE | View Gene Set | 3.054e-06 | 185 | 0.0001136 | 5 | Huntington's disease | www.broad.mit.e... |
Broad KEGG_PROTEASOME | View Gene Set | 1.588e-05 | 48 | 0.0004921 | 6 | Proteasome | www.broad.mit.e... |
Broad KEGG_ALZHEIMERS_DISEASE | View Gene Set | 5.585e-05 | 169 | 0.001484 | 7 | Alzheimer's disease | www.broad.mit.e... |
Broad KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION | View Gene Set | 0.0001513 | 44 | 0.003518 | 8 | Vasopressin-regulated water reabsorption | www.broad.mit.e... |
Broad KEGG_CITRATE_CYCLE_TCA_CYCLE | View Gene Set | 0.0005108 | 32 | 0.008798 | 9 | Citrate cycle (TCA cycle) | www.broad.mit.e... |
Broad KEGG_PROTEIN_EXPORT | View Gene Set | 0.0005053 | 24 | 0.008798 | 9 | Protein export | www.broad.mit.e... |
Broad KEGG_INSULIN_SIGNALING_PATHWAY | View Gene Set | 0.0005203 | 137 | 0.008798 | 9 | Insulin signaling pathway | www.broad.mit.e... |
Broad KEGG_FC_EPSILON_RI_SIGNALING_PATHWAY | View Gene Set | 0.001102 | 79 | 0.01708 | 12 | Fc epsilon RI signaling pathway | www.broad.mit.e... |
Broad KEGG_RIBOSOME | View Gene Set | 0.002842 | 88 | 0.04066 | 13 | Ribosome | www.broad.mit.e... |
Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
Broad REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC | View Gene Set | 1.507e-08 | 57 | 3.239e-06 | 1 | Genes involved in Autodegradation of Cdh1 by Cdh1:APC/C | www.broad.mit.e... |
Broad REACTOME_METABOLISM_OF_PROTEINS | View Gene Set | 1.24e-08 | 215 | 3.239e-06 | 1 | Genes involved in Metabolism of proteins | www.broad.mit.e... |
Broad REACTOME_GENE_EXPRESSION | View Gene Set | 2.691e-08 | 415 | 3.857e-06 | 3 | Genes involved in Gene Expression | www.broad.mit.e... |
Broad REACTOME_TRNA_AMINOACYLATION | View Gene Set | 7.589e-08 | 40 | 8.158e-06 | 4 | Genes involved in tRNA Aminoacylation | www.broad.mit.e... |
Broad REACTOME_DIABETES_PATHWAYS | View Gene Set | 1.029e-07 | 383 | 8.231e-06 | 5 | Genes involved in Diabetes pathways | www.broad.mit.e... |
Broad REACTOME_ELECTRON_TRANSPORT_CHAIN | View Gene Set | 1.148e-07 | 75 | 8.231e-06 | 5 | Genes involved in Electron Transport Chain | www.broad.mit.e... |
Broad REACTOME_CYTOSOLIC_TRNA_AMINOACYLATION | View Gene Set | 2.319e-07 | 23 | 1.425e-05 | 7 | Genes involved in Cytosolic tRNA aminoacylation | www.broad.mit.e... |
Broad REACTOME_INTEGRATION_OF_ENERGY_METABOLISM | View Gene Set | 5.5e-07 | 229 | 2.956e-05 | 8 | Genes involved in Integration of energy metabolism | www.broad.mit.e... |
Broad REACTOME_TRANSLATION | View Gene Set | 1.01e-06 | 120 | 4.824e-05 | 9 | Genes involved in Translation | www.broad.mit.e... |
Broad REACTOME_TRANSCRIPTION | View Gene Set | 1.478e-06 | 188 | 6.356e-05 | 10 | Genes involved in Transcription | www.broad.mit.e... |
Broad REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE | View Gene Set | 2.014e-06 | 47 | 7.873e-05 | 11 | Genes involved in Regulation of ornithine decarboxylase (ODC) | www.broad.mit.e... |
Broad REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1 | View Gene Set | 3.566e-06 | 48 | 0.0001194 | 12 | Genes involved in SCF-beta-TrCP mediated degradation of Emi1 | www.broad.mit.e... |
Broad REACTOME_SIGNALING_BY_WNT | View Gene Set | 3.611e-06 | 58 | 0.0001194 | 12 | Genes involved in Signaling by Wnt | www.broad.mit.e... |
Broad REACTOME_GLUCOSE_REGULATION_OF_INSULIN_SECRETION | View Gene Set | 4.471e-06 | 161 | 0.000134 | 14 | Genes involved in Glucose Regulation of Insulin Secretion | www.broad.mit.e... |
Broad REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G | View Gene Set | 4.673e-06 | 47 | 0.000134 | 14 | Genes involved in Vif-mediated degradation of APOBEC3G | www.broad.mit.e... |
Broad REACTOME_PYRUVATE_METABOLISM_AND_TCA_CYCLE | View Gene Set | 9.499e-06 | 36 | 0.0002553 | 16 | Genes involved in Pyruvate metabolism and TCA cycle | www.broad.mit.e... |
Broad REACTOME_HIV_INFECTION | View Gene Set | 1.056e-05 | 183 | 0.0002671 | 17 | Genes involved in HIV Infection | www.broad.mit.e... |
Broad REACTOME_REGULATION_OF_APC_ACTIVATORS_BETWEEN_G1_S_AND_EARLY_ANAPHASE | View Gene Set | 1.182e-05 | 71 | 0.0002824 | 18 | Genes involved in Regulation of APC/C activators between G1/S and early anaphase | www.broad.mit.e... |
Broad REACTOME_CDC20_PHOSPHO_APC_MEDIATED_DEGRADATION_OF_CYCLIN_A | View Gene Set | 1.363e-05 | 63 | 0.0003084 | 19 | Genes involved in Cdc20:Phospho-APC/C mediated degradation of Cyclin A | www.broad.mit.e... |
Broad REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX | View Gene Set | 1.51e-05 | 49 | 0.0003093 | 20 | Genes involved in Formation of the ternary complex and subsequently the 43S complex | www.broad.mit.e... |
Broad REACTOME_INSULIN_SYNTHESIS_AND_SECRETION | View Gene Set | 1.478e-05 | 129 | 0.0003093 | 20 | Genes involved in Insulin Synthesis and Secretion | www.broad.mit.e... |
Broad REACTOME_GTP_HYDROLYSIS_AND_JOINING_OF_THE_60S_RIBOSOMAL_SUBUNIT | View Gene Set | 1.657e-05 | 106 | 0.0003238 | 22 | Genes involved in GTP hydrolysis and joining of the 60S ribosomal subunit | www.broad.mit.e... |
Broad REACTOME_P53_INDEPENDENT_DNA_DAMAGE_RESPONSE | View Gene Set | 2.285e-05 | 43 | 0.0004272 | 23 | Genes involved in p53-Independent DNA Damage Response | www.broad.mit.e... |
Broad REACTOME_TRANSLATION_INITIATION_COMPLEX_FORMATION | View Gene Set | 2.756e-05 | 56 | 0.0004938 | 24 | Genes involved in Translation initiation complex formation | www.broad.mit.e... |
Broad REACTOME_MRNA_SPLICING_MINOR_PATHWAY | View Gene Set | 5.531e-05 | 38 | 0.0009513 | 25 | Genes involved in mRNA Splicing - Minor Pathway | www.broad.mit.e... |
Broad REACTOME_RNA_POLYMERASE_I_III_AND_MITOCHONDRIAL_TRANSCRIPTION | View Gene Set | 6.267e-05 | 120 | 0.001036 | 26 | Genes involved in RNA Polymerase I RNA Polymerase III and Mitochondrial Transcription | www.broad.mit.e... |
Broad REACTOME_HIV1_TRANSCRIPTION_ELONGATION | View Gene Set | 6.781e-05 | 41 | 0.00108 | 27 | Genes involved in HIV-1 Transcription Elongation | www.broad.mit.e... |
Broad REACTOME_STABILIZATION_OF_P53 | View Gene Set | 9.653e-05 | 46 | 0.001482 | 28 | Genes involved in Stabilization of p53 | www.broad.mit.e... |
Broad REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION | View Gene Set | 0.0001064 | 100 | 0.001578 | 29 | Genes involved in Influenza Viral RNA Transcription and Replication | www.broad.mit.e... |
Broad REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX | View Gene Set | 0.0001214 | 52 | 0.001741 | 30 | Genes involved in CDT1 association with the CDC6:ORC:origin complex | www.broad.mit.e... |
Broad REACTOME_METABOLISM_OF_AMINO_ACIDS | View Gene Set | 0.0001373 | 162 | 0.001905 | 31 | Genes involved in Metabolism of amino acids | www.broad.mit.e... |
Broad REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS | View Gene Set | 0.0001664 | 120 | 0.002236 | 32 | Genes involved in Host Interactions of HIV factors | www.broad.mit.e... |
Broad REACTOME_FORMATION_OF_A_POOL_OF_FREE_40S_SUBUNITS | View Gene Set | 0.0002408 | 95 | 0.003138 | 33 | Genes involved in Formation of a pool of free 40S subunits | www.broad.mit.e... |
Broad REACTOME_APOPTOSIS | View Gene Set | 0.000292 | 129 | 0.003693 | 34 | Genes involved in Apoptosis | www.broad.mit.e... |
Broad REACTOME_FORMATION_OF_THE_EARLY_ELONGATION_COMPLEX | View Gene Set | 0.0003037 | 32 | 0.003731 | 35 | Genes involved in Formation of the Early Elongation Complex | www.broad.mit.e... |
Broad REACTOME_CHOLESTEROL_BIOSYNTHESIS | View Gene Set | 0.000345 | 21 | 0.004009 | 36 | Genes involved in Cholesterol biosynthesis | www.broad.mit.e... |
Broad REACTOME_TAT_MEDIATED_HIV1_ELONGATION_ARREST_AND_RECOVERY | View Gene Set | 0.0003391 | 30 | 0.004009 | 36 | Genes involved in Tat-mediated HIV-1 elongation arrest and recovery | www.broad.mit.e... |
Broad REACTOME_COPI_MEDIATED_TRANSPORT | View Gene Set | 0.0004096 | 10 | 0.004635 | 38 | Genes involved in COPI Mediated Transport | www.broad.mit.e... |
Broad REACTOME_TRANSCRIPTION_OF_THE_HIV_GENOME | View Gene Set | 0.0004879 | 59 | 0.00538 | 39 | Genes involved in Transcription of the HIV genome | www.broad.mit.e... |
Broad REACTOME_INFLUENZA_LIFE_CYCLE | View Gene Set | 0.00053 | 137 | 0.005614 | 40 | Genes involved in Influenza Life Cycle | www.broad.mit.e... |
Broad REACTOME_SCF_SKP2_MEDIATED_DEGRADATION_OF_P27_P21 | View Gene Set | 0.0005353 | 52 | 0.005614 | 40 | Genes involved in SCF(Skp2)-mediated degradation of p2721 | www.broad.mit.e... |
Broad REACTOME_NUCLEAR_EVENTS_KINASE_AND_TRANSCRIPTION_FACTOR_ACTIVATION | View Gene Set | 0.0006121 | 24 | 0.006123 | 42 | Genes involved in Nuclear Events (kinase and transcription factor activation) | www.broad.mit.e... |
Broad REACTOME_PACKAGING_OF_TELOMERE_ENDS | View Gene Set | 0.0006123 | 49 | 0.006123 | 42 | Genes involved in Packaging Of Telomere Ends | www.broad.mit.e... |
Broad REACTOME_ABORTIVE_ELONGATION_OF_HIV1_TRANSCRIPT_IN_THE_ABSENCE_OF_TAT | View Gene Set | 0.0006654 | 23 | 0.006358 | 44 | Genes involved in Abortive elongation of HIV-1 transcript in the absence of Tat | www.broad.mit.e... |
Broad REACTOME_CITRIC_ACID_CYCLE | View Gene Set | 0.000652 | 19 | 0.006358 | 44 | Genes involved in Citric acid cycle (TCA cycle) | www.broad.mit.e... |
Broad REACTOME_RNA_POLYMERASE_III_TRANSCRIPTION | View Gene Set | 0.0008586 | 34 | 0.008026 | 46 | Genes involved in RNA Polymerase III Transcription | www.broad.mit.e... |
Broad REACTOME_HIV1_TRANSCRIPTION_INITIATION | View Gene Set | 0.0009357 | 39 | 0.008561 | 47 | Genes involved in HIV-1 Transcription Initiation | www.broad.mit.e... |
Broad REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_ | View Gene Set | 0.001027 | 58 | 0.008941 | 48 | Genes involved in Cyclin E associated events during G1/S transition | www.broad.mit.e... |
Broad REACTOME_REGULATION_OF_INSULIN_SECRETION | View Gene Set | 0.00104 | 212 | 0.008941 | 48 | Genes involved in Regulation of Insulin Secretion | www.broad.mit.e... |
Broad REACTOME_TRKA_SIGNALLING_FROM_THE_PLASMA_MEMBRANE | View Gene Set | 0.001029 | 103 | 0.008941 | 48 | Genes involved in TRKA signalling from the plasma membrane | www.broad.mit.e... |
Broad REACTOME_VIRAL_MESSENGER_RNA_SYNTHESIS | View Gene Set | 0.001219 | 14 | 0.01028 | 51 | Genes involved in Viral Messenger RNA Synthesis | www.broad.mit.e... |
Broad REACTOME_PYRUVATE_METABOLISM | View Gene Set | 0.001384 | 18 | 0.01144 | 52 | Genes involved in Pyruvate metabolism | www.broad.mit.e... |
Broad REACTOME_RNA_POLYMERASE_III_TRANSCRIPTION_INITIATION | View Gene Set | 0.001863 | 29 | 0.01511 | 53 | Genes involved in RNA Polymerase III Transcription Initiation | www.broad.mit.e... |
Broad REACTOME_SIGNALLING_BY_NGF | View Gene Set | 0.002069 | 216 | 0.01647 | 54 | Genes involved in Signalling by NGF | www.broad.mit.e... |
Broad REACTOME_ELONGATION_AND_PROCESSING_OF_CAPPED_TRANSCRIPTS | View Gene Set | 0.002324 | 124 | 0.01817 | 55 | Genes involved in Elongation and Processing of Capped Transcripts | www.broad.mit.e... |
Broad REACTOME_RNA_POLYMERASE_II_TRANSCRIPTION | View Gene Set | 0.002605 | 83 | 0.02 | 56 | Genes involved in RNA Polymerase II Transcription | www.broad.mit.e... |
Broad REACTOME_FORMATION_AND_MATURATION_OF_MRNA_TRANSCRIPT | View Gene Set | 0.003278 | 142 | 0.02473 | 57 | Genes involved in Formation and Maturation of mRNA Transcript | www.broad.mit.e... |
Broad REACTOME_CONVERSION_FROM_APC_CDC20_TO_APC_CDH1_IN_LATE_ANAPHASE | View Gene Set | 0.003566 | 17 | 0.02644 | 58 | Genes involved in Conversion from APC/C:Cdc20 to APC/C:Cdh1 in late anaphase | www.broad.mit.e... |
Broad REACTOME_ERK_MAPK_TARGETS | View Gene Set | 0.003812 | 21 | 0.02778 | 59 | Genes involved in ERK/MAPK targets | www.broad.mit.e... |
Broad REACTOME_REGULATION_OF_PYRUVATE_DEHYDROGENASE_COMPLEX | View Gene Set | 0.004427 | 12 | 0.03173 | 60 | Genes involved in Regulation of pyruvate dehydrogenase (PDH) complex | www.broad.mit.e... |
Broad REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES | View Gene Set | 0.004522 | 30 | 0.03188 | 61 | Genes involved in MAPK targets/Nuclear events mediated by MAP kinases | www.broad.mit.e... |
Broad REACTOME_PEPTIDE_CHAIN_ELONGATION | View Gene Set | 0.004696 | 84 | 0.03257 | 62 | Genes involved in Peptide chain elongation | www.broad.mit.e... |
Broad REACTOME_DUAL_INCISION_REACTION_IN_TC_NER | View Gene Set | 0.004938 | 28 | 0.0337 | 63 | Genes involved in Dual incision reaction in TC-NER | www.broad.mit.e... |
Broad REACTOME_RNA_POL_II_CTD_PHOSPHORYLATION_AND_INTERACTION_WITH_CE | View Gene Set | 0.005166 | 26 | 0.03471 | 64 | Genes involved in RNA Pol II CTD phosphorylation and interaction with CE | www.broad.mit.e... |
Broad REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE | View Gene Set | 0.00551 | 90 | 0.0359 | 65 | Genes involved in Late Phase of HIV Life Cycle | www.broad.mit.e... |
Broad REACTOME_MAP_KINASES_ACTIVATION_IN_TLR_CASCADE | View Gene Set | 0.005464 | 44 | 0.0359 | 65 | Genes involved in MAP kinases activation in TLR cascade | www.broad.mit.e... |
Broad REACTOME_SIGNALLING_TO_RAS | View Gene Set | 0.005702 | 26 | 0.0366 | 67 | Genes involved in Signalling to RAS | www.broad.mit.e... |
Broad REACTOME_M_G1_TRANSITION | View Gene Set | 0.006556 | 61 | 0.04114 | 68 | Genes involved in M/G1 Transition | www.broad.mit.e... |
Broad REACTOME_VIRAL_MRNA_TRANSLATION | View Gene Set | 0.006602 | 84 | 0.04114 | 68 | Genes involved in Viral mRNA Translation | www.broad.mit.e... |
Broad REACTOME_UNFOLDED_PROTEIN_RESPONSE | View Gene Set | 0.006879 | 19 | 0.04226 | 70 | Genes involved in Unfolded Protein Response | www.broad.mit.e... |
Broad REACTOME_PHOSPHORYLATION_OF_THE_APC | View Gene Set | 0.00737 | 17 | 0.04464 | 71 | Genes involved in Phosphorylation of the APC/C | www.broad.mit.e... |
Broad REACTOME_MEMBRANE_TRAFFICKING | View Gene Set | 0.007561 | 78 | 0.0447 | 72 | Genes involved in Membrane Trafficking | www.broad.mit.e... |
Broad REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC | View Gene Set | 0.007588 | 28 | 0.0447 | 72 | Genes involved in Prefoldin mediated transfer of substrate to CCT/TriC | www.broad.mit.e... |
Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
Broad ATACTGT MIR-144 | View Gene Set | 0.000407 | 173 | 0.04498 | 1 | Targets of MicroRNA ATACTGT MIR-144 | www.broad.mit.e... MIR-144... |
Broad CCAGGGG MIR-331 | View Gene Set | 0.0003337 | 83 | 0.04498 | 1 | Targets of MicroRNA CCAGGGG MIR-331 | www.broad.mit.e... MIR-331... |
Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
Broad SCGGAAGY_V$ELK1_02 | View Gene Set | 1.488e-10 | 784 | 9.151e-08 | 1 | Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif SCGGAAGY which matches annotation for ELK1: ELK1 member of ETS oncogene family | www.broad.mit.e... |
Broad RCGCANGCGY_V$NRF1_Q6 | View Gene Set | 1.095e-06 | 580 | 0.0003366 | 2 | Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif RCGCANGCGY which matches annotation for NRF1: nuclear respiratory factor 1 | www.broad.mit.e... |
Broad GGGCGGR_V$SP1_Q6 | View Gene Set | 8.683e-06 | 2120 | 0.00178 | 3 | Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GGGCGGR which matches annotation for SP1: Sp1 transcription factor | www.broad.mit.e... |
Broad V$ELK1_02 | View Gene Set | 1.334e-05 | 170 | 0.001925 | 4 | Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNNNCCGGAARTNN which matches annotation for ELK1: ELK1 member of ETS oncogene family | www.broad.mit.e... |
Broad GTGACGY_V$E4F1_Q6 | View Gene Set | 1.565e-05 | 462 | 0.001925 | 4 | Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GTGACGY which matches annotation for E4F1: E4F transcription factor 1 | www.broad.mit.e... |
Broad GCCATNTTG_V$YY1_Q6 | View Gene Set | 2.864e-05 | 289 | 0.002936 | 6 | Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GCCATNTTG which matches annotation for YY1: YY1 transcription factor | www.broad.mit.e... |
Broad GGAANCGGAANY_UNKNOWN | View Gene Set | 0.0002324 | 79 | 0.02012 | 7 | Genes with promoter regions [-2kb 2kb] around transcription start site containing motif GGAANCGGAANY. Motif does not match any known transcription factor | www.broad.mit.e... |
Broad TCCCRNNRTGC_UNKNOWN | View Gene Set | 0.0002617 | 130 | 0.02012 | 7 | Genes with promoter regions [-2kb 2kb] around transcription start site containing motif TCCCRNNRTGC. Motif does not match any known transcription factor | www.broad.mit.e... |
Broad V$YY1_01 | View Gene Set | 0.0004337 | 190 | 0.02964 | 9 | Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNNNNCCATNTWNNNWN which matches annotation for YY1: YY1 transcription factor | www.broad.mit.e... |
Broad V$YY1_Q6 | View Gene Set | 0.0005156 | 166 | 0.03171 | 10 | Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GCCATNTTN which matches annotation for YY1: YY1 transcription factor | www.broad.mit.e... |
Broad V$NFMUE1_Q6 | View Gene Set | 0.0007309 | 175 | 0.04086 | 11 | Genes with promoter regions [-2kb 2kb] around transcription start site containing motif CGGCCATCT. Motif does not match any known transcription factor | www.broad.mit.e... |
Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
Broad MORF_SOD1 | View Gene Set | 2.512e-13 | 247 | 1.072e-10 | 1 | Neighborhood of SOD1 | www.broad.mit.e... |
Broad MORF_PRKAG1 | View Gene Set | 2.698e-12 | 202 | 5.759e-10 | 2 | Neighborhood of PRKAG1 | www.broad.mit.e... |
Broad MORF_DDB1 | View Gene Set | 1.224e-10 | 220 | 1.742e-08 | 3 | Neighborhood of DDB1 | www.broad.mit.e... |
Broad MORF_EIF3S2 | View Gene Set | 2.15e-10 | 220 | 2.295e-08 | 4 | Neighborhood of EIF3S2 | www.broad.mit.e... |
Broad MORF_CSNK2B | View Gene Set | 3.39e-10 | 256 | 2.895e-08 | 5 | Neighborhood of CSNK2B | www.broad.mit.e... |
Broad MORF_DAP3 | View Gene Set | 6.064e-09 | 175 | 4.315e-07 | 6 | Neighborhood of DAP3 | www.broad.mit.e... |
Broad MORF_DEAF1 | View Gene Set | 7.467e-09 | 54 | 4.555e-07 | 7 | Neighborhood of DEAF1 | www.broad.mit.e... |
Broad MORF_RAD23A | View Gene Set | 1.321e-08 | 316 | 7.051e-07 | 8 | Neighborhood of RAD23A | www.broad.mit.e... |
Broad MORF_RAN | View Gene Set | 1.921e-08 | 242 | 9.114e-07 | 9 | Neighborhood of RAN | www.broad.mit.e... |
Broad MORF_EI24 | View Gene Set | 4.915e-07 | 136 | 2.099e-05 | 10 | Neighborhood of EI24 | www.broad.mit.e... |
Broad MORF_AP3D1 | View Gene Set | 1.101e-06 | 119 | 4.273e-05 | 11 | Neighborhood of AP3D1 | www.broad.mit.e... |
Broad MORF_BUB3 | View Gene Set | 1.513e-06 | 256 | 5.041e-05 | 12 | Neighborhood of BUB3 | www.broad.mit.e... |
Broad MORF_AATF | View Gene Set | 1.653e-06 | 179 | 5.041e-05 | 12 | Neighborhood of AATF | www.broad.mit.e... |
Broad MORF_CDC16 | View Gene Set | 1.602e-06 | 67 | 5.041e-05 | 12 | Neighborhood of CDC16 | www.broad.mit.e... |
Broad MORF_GNB1 | View Gene Set | 3.215e-06 | 276 | 8.58e-05 | 15 | Neighborhood of GNB1 | www.broad.mit.e... |
Broad MORF_MAP2K2 | View Gene Set | 3.105e-06 | 123 | 8.58e-05 | 15 | Neighborhood of MAP2K2 | www.broad.mit.e... |
Broad MORF_HDAC2 | View Gene Set | 5.04e-06 | 256 | 0.0001266 | 17 | Neighborhood of HDAC2 | www.broad.mit.e... |
Broad MORF_GMPS | View Gene Set | 6.527e-06 | 48 | 0.0001548 | 18 | Neighborhood of GMPS | www.broad.mit.e... |
Broad MORF_HDAC1 | View Gene Set | 7.088e-06 | 222 | 0.0001593 | 19 | Neighborhood of HDAC1 | www.broad.mit.e... |
Broad MORF_FBL | View Gene Set | 8.09e-06 | 121 | 0.0001659 | 20 | Neighborhood of FBL | www.broad.mit.e... |
Broad MORF_TPR | View Gene Set | 8.16e-06 | 131 | 0.0001659 | 20 | Neighborhood of TPR | www.broad.mit.e... |
Broad MORF_RAD23B | View Gene Set | 1.002e-05 | 159 | 0.0001944 | 22 | Neighborhood of RAD23B | www.broad.mit.e... |
Broad MORF_PPP1CA | View Gene Set | 1.437e-05 | 145 | 0.0002669 | 23 | Neighborhood of PPP1CA | www.broad.mit.e... |
Broad MORF_PSMC1 | View Gene Set | 1.826e-05 | 162 | 0.000315 | 24 | Neighborhood of PSMC1 | www.broad.mit.e... |
Broad MORF_UBE2I | View Gene Set | 1.844e-05 | 208 | 0.000315 | 24 | Neighborhood of UBE2I | www.broad.mit.e... |
Broad MORF_ACP1 | View Gene Set | 2.037e-05 | 178 | 0.0003346 | 26 | Neighborhood of ACP1 | www.broad.mit.e... |
Broad GNF2_NS | View Gene Set | 2.164e-05 | 35 | 0.0003422 | 27 | Neighborhood of NS | www.broad.mit.e... |
Broad MORF_GSPT1 | View Gene Set | 2.329e-05 | 41 | 0.0003551 | 28 | Neighborhood of GSPT1 | www.broad.mit.e... |
Broad GCM_NF2 | View Gene Set | 2.952e-05 | 235 | 0.0004347 | 29 | Neighborhood of NF2 | www.broad.mit.e... |
Broad MORF_UBE2N | View Gene Set | 3.476e-05 | 79 | 0.0004948 | 30 | Neighborhood of UBE2N | www.broad.mit.e... |
Broad GCM_USP6 | View Gene Set | 5.099e-05 | 54 | 0.0007024 | 31 | Neighborhood of USP6 | www.broad.mit.e... |
Broad MORF_HAT1 | View Gene Set | 5.942e-05 | 155 | 0.0007929 | 32 | Neighborhood of HAT1 | www.broad.mit.e... |
Broad MORF_RAD21 | View Gene Set | 6.389e-05 | 157 | 0.0008074 | 33 | Neighborhood of RAD21 | www.broad.mit.e... |
Broad MORF_RAC1 | View Gene Set | 6.467e-05 | 196 | 0.0008074 | 33 | Neighborhood of RAC1 | www.broad.mit.e... |
Broad GCM_BCL2L1 | View Gene Set | 6.618e-05 | 25 | 0.0008074 | 33 | Neighborhood of BCL2L1 | www.broad.mit.e... |
Broad MORF_ERH | View Gene Set | 7.717e-05 | 103 | 0.0009153 | 36 | Neighborhood of ERH | www.broad.mit.e... |
Broad MORF_PRKDC | View Gene Set | 8.734e-05 | 173 | 0.001008 | 37 | Neighborhood of PRKDC | www.broad.mit.e... |
Broad MORF_PPP2R4 | View Gene Set | 9.278e-05 | 44 | 0.001043 | 38 | Neighborhood of PPP2R4 | www.broad.mit.e... |
Broad MORF_XPC | View Gene Set | 0.000107 | 55 | 0.001142 | 39 | Neighborhood of XPC | www.broad.mit.e... |
Broad MORF_PTPN11 | View Gene Set | 0.0001047 | 93 | 0.001142 | 39 | Neighborhood of PTPN11 | www.broad.mit.e... |
Broad MORF_XRCC5 | View Gene Set | 0.0001191 | 210 | 0.001241 | 41 | Neighborhood of XRCC5 | www.broad.mit.e... |
Broad MORF_NME2 | View Gene Set | 0.0001276 | 145 | 0.001248 | 42 | Neighborhood of NME2 | www.broad.mit.e... |
Broad MORF_RAB1A | View Gene Set | 0.0001276 | 179 | 0.001248 | 42 | Neighborhood of RAB1A | www.broad.mit.e... |
Broad MORF_SKP1A | View Gene Set | 0.0001286 | 175 | 0.001248 | 42 | Neighborhood of SKP1A | www.broad.mit.e... |
Broad GCM_HBP1 | View Gene Set | 0.0001517 | 54 | 0.00144 | 45 | Neighborhood of HBP1 | www.broad.mit.e... |
Broad GNF2_RAN | View Gene Set | 0.0001597 | 78 | 0.001482 | 46 | Neighborhood of RAN | www.broad.mit.e... |
Broad MORF_PRDX3 | View Gene Set | 0.0002161 | 79 | 0.001963 | 47 | Neighborhood of PRDX3 | www.broad.mit.e... |
Broad MORF_DEK | View Gene Set | 0.0002405 | 229 | 0.00214 | 48 | Neighborhood of DEK | www.broad.mit.e... |
Broad MORF_ANP32B | View Gene Set | 0.0002619 | 174 | 0.002282 | 49 | Neighborhood of ANP32B | www.broad.mit.e... |
Broad MORF_PRKAR1A | View Gene Set | 0.0003055 | 133 | 0.002609 | 50 | Neighborhood of PRKAR1A | www.broad.mit.e... |
Broad GCM_CHUK | View Gene Set | 0.0003705 | 61 | 0.003102 | 51 | Neighborhood of CHUK | www.broad.mit.e... |
Broad GNF2_NPM1 | View Gene Set | 0.0003823 | 57 | 0.003139 | 52 | Neighborhood of NPM1 | www.broad.mit.e... |
Broad MORF_GPX4 | View Gene Set | 0.0004203 | 49 | 0.003386 | 53 | Neighborhood of GPX4 | www.broad.mit.e... |
Broad GCM_ACTG1 | View Gene Set | 0.0004608 | 113 | 0.003644 | 54 | Neighborhood of ACTG1 | www.broad.mit.e... |
Broad MORF_MTA1 | View Gene Set | 0.0004955 | 95 | 0.003847 | 55 | Neighborhood of MTA1 | www.broad.mit.e... |
Broad MORF_BECN1 | View Gene Set | 0.0005393 | 93 | 0.004112 | 56 | Neighborhood of BECN1 | www.broad.mit.e... |
Broad MORF_PPP2R5E | View Gene Set | 0.0005507 | 76 | 0.004125 | 57 | Neighborhood of PPP2R5E | www.broad.mit.e... |
Broad MORF_ATOX1 | View Gene Set | 0.0005649 | 72 | 0.004159 | 58 | Neighborhood of ATOX1 | www.broad.mit.e... |
Broad MORF_CSNK1D | View Gene Set | 0.0006337 | 65 | 0.004516 | 59 | Neighborhood of CSNK1D | www.broad.mit.e... |
Broad GCM_BECN1 | View Gene Set | 0.0006345 | 59 | 0.004516 | 59 | Neighborhood of BECN1 | www.broad.mit.e... |
Broad GCM_NPM1 | View Gene Set | 0.0006854 | 108 | 0.004798 | 61 | Neighborhood of NPM1 | www.broad.mit.e... |
Broad MORF_DAP | View Gene Set | 0.0007555 | 72 | 0.00512 | 62 | Neighborhood of DAP | www.broad.mit.e... |
Broad MORF_REV3L | View Gene Set | 0.0007551 | 52 | 0.00512 | 62 | Neighborhood of REV3L | www.broad.mit.e... |
Broad MORF_UNG | View Gene Set | 0.0008161 | 65 | 0.005399 | 64 | Neighborhood of UNG | www.broad.mit.e... |
Broad MORF_PHB | View Gene Set | 0.0008219 | 112 | 0.005399 | 64 | Neighborhood of PHB | www.broad.mit.e... |
Broad MORF_PPP6C | View Gene Set | 0.0009815 | 88 | 0.006224 | 66 | Neighborhood of PPP6C | www.broad.mit.e... |
Broad GCM_UBE2N | View Gene Set | 0.0009912 | 125 | 0.006224 | 66 | Neighborhood of UBE2N | www.broad.mit.e... |
Broad GNF2_EIF3S6 | View Gene Set | 0.0009823 | 109 | 0.006224 | 66 | Neighborhood of EIF3S6 | www.broad.mit.e... |
Broad GCM_SMO | View Gene Set | 0.00108 | 49 | 0.006682 | 69 | Neighborhood of SMO | www.broad.mit.e... |
Broad GCM_DFFA | View Gene Set | 0.001289 | 100 | 0.007866 | 70 | Neighborhood of DFFA | www.broad.mit.e... |
Broad MORF_CTBP1 | View Gene Set | 0.001701 | 149 | 0.01011 | 71 | Neighborhood of CTBP1 | www.broad.mit.e... |
Broad GCM_TPT1 | View Gene Set | 0.001705 | 69 | 0.01011 | 71 | Neighborhood of TPT1 | www.broad.mit.e... |
Broad MORF_G22P1 | View Gene Set | 0.001873 | 145 | 0.01096 | 73 | Neighborhood of G22P1 | www.broad.mit.e... |
Broad MORF_AP2M1 | View Gene Set | 0.001978 | 197 | 0.01141 | 74 | Neighborhood of AP2M1 | www.broad.mit.e... |
Broad MORF_NPM1 | View Gene Set | 0.002143 | 152 | 0.0122 | 75 | Neighborhood of NPM1 | www.broad.mit.e... |
Broad GCM_DDX11 | View Gene Set | 0.002281 | 38 | 0.01281 | 76 | Neighborhood of DDX11 | www.broad.mit.e... |
Broad MORF_SS18 | View Gene Set | 0.002491 | 55 | 0.01381 | 77 | Neighborhood of SS18 | www.broad.mit.e... |
Broad MORF_MBD4 | View Gene Set | 0.002625 | 76 | 0.01437 | 78 | Neighborhood of MBD4 | www.broad.mit.e... |
Broad MORF_PPP1CC | View Gene Set | 0.002709 | 150 | 0.01464 | 79 | Neighborhood of PPP1CC | www.broad.mit.e... |
Broad GCM_DDX5 | View Gene Set | 0.002744 | 52 | 0.01464 | 80 | Neighborhood of DDX5 | www.broad.mit.e... |
Broad MORF_ERCC2 | View Gene Set | 0.003236 | 91 | 0.01639 | 81 | Neighborhood of ERCC2 | www.broad.mit.e... |
Broad MORF_PSMC2 | View Gene Set | 0.003191 | 100 | 0.01639 | 81 | Neighborhood of PSMC2 | www.broad.mit.e... |
Broad MORF_RPA2 | View Gene Set | 0.003182 | 170 | 0.01639 | 81 | Neighborhood of RPA2 | www.broad.mit.e... |
Broad MORF_BMI1 | View Gene Set | 0.003235 | 71 | 0.01639 | 81 | Neighborhood of BMI1 | www.broad.mit.e... |
Broad MORF_EIF4E | View Gene Set | 0.003264 | 76 | 0.01639 | 81 | Neighborhood of EIF4E | www.broad.mit.e... |
Broad MORF_EIF4A2 | View Gene Set | 0.003585 | 120 | 0.0178 | 86 | Neighborhood of EIF4A2 | www.broad.mit.e... |
Broad MORF_TPT1 | View Gene Set | 0.004804 | 100 | 0.02358 | 87 | Neighborhood of TPT1 | www.broad.mit.e... |
Broad MORF_IKBKG | View Gene Set | 0.00522 | 119 | 0.02533 | 88 | Neighborhood of IKBKG | www.broad.mit.e... |
Broad MORF_EIF3S6 | View Gene Set | 0.007932 | 108 | 0.03806 | 89 | Neighborhood of EIF3S6 | www.broad.mit.e... |
Broad GCM_APEX1 | View Gene Set | 0.008897 | 102 | 0.04221 | 90 | Neighborhood of APEX1 | www.broad.mit.e... |
Broad MORF_PPP2CA | View Gene Set | 0.009099 | 110 | 0.0427 | 91 | Neighborhood of PPP2CA | www.broad.mit.e... |
Broad MORF_RFC1 | View Gene Set | 0.01019 | 98 | 0.04678 | 92 | Neighborhood of RFC1 | www.broad.mit.e... |
Broad GCM_MLL | View Gene Set | 0.01014 | 130 | 0.04678 | 92 | Neighborhood of MLL | www.broad.mit.e... |
Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
Broad module_83 | View Gene Set | 4.609e-11 | 296 | 2.093e-08 | 1 | Genes in module_83 | www.broad.mit.e... |
Broad module_62 | View Gene Set | 1.181e-06 | 88 | 0.000268 | 2 | Genes in module_62 | www.broad.mit.e... |
Broad module_28 | View Gene Set | 2.762e-06 | 32 | 0.0003311 | 3 | Genes in module_28 | www.broad.mit.e... |
Broad module_32 | View Gene Set | 3.579e-06 | 227 | 0.0003311 | 3 | Genes in module_32 | www.broad.mit.e... |
Broad module_91 | View Gene Set | 3.647e-06 | 37 | 0.0003311 | 3 | Genes in module_91 | www.broad.mit.e... |
Broad module_114 | View Gene Set | 4.741e-06 | 314 | 0.0003587 | 6 | Genes in module_114 | www.broad.mit.e... |
Broad module_4 | View Gene Set | 8.112e-06 | 21 | 0.0005101 | 7 | Genes in module_4 | www.broad.mit.e... |
Broad module_82 | View Gene Set | 9.346e-06 | 24 | 0.0005101 | 7 | Genes in module_82 | www.broad.mit.e... |
Broad module_133 | View Gene Set | 1.011e-05 | 15 | 0.0005101 | 7 | Genes in module_133 | www.broad.mit.e... |
Broad module_22 | View Gene Set | 1.797e-05 | 45 | 0.0008157 | 10 | Genes in module_22 | www.broad.mit.e... |
Broad module_151 | View Gene Set | 2.142e-05 | 297 | 0.0008841 | 11 | Genes in module_151 | www.broad.mit.e... |
Broad module_152 | View Gene Set | 2.96e-05 | 121 | 0.00112 | 12 | Genes in module_152 | www.broad.mit.e... |
Broad module_160 | View Gene Set | 5.206e-05 | 15 | 0.001818 | 13 | Genes in module_160 | www.broad.mit.e... |
Broad module_239 | View Gene Set | 7.854e-05 | 112 | 0.002547 | 14 | Genes in module_239 | www.broad.mit.e... |
Broad module_149 | View Gene Set | 0.0001585 | 36 | 0.004798 | 15 | Genes in module_149 | www.broad.mit.e... |
Broad module_159 | View Gene Set | 0.0001723 | 81 | 0.004889 | 16 | Genes in module_159 | www.broad.mit.e... |
Broad module_35 | View Gene Set | 0.0003053 | 16 | 0.008152 | 17 | Genes in module_35 | www.broad.mit.e... |
Broad module_350 | View Gene Set | 0.0003596 | 57 | 0.00907 | 18 | Genes in module_350 | www.broad.mit.e... |
Broad module_17 | View Gene Set | 0.0004555 | 351 | 0.01088 | 19 | Genes in module_17 | www.broad.mit.e... |
Broad module_42 | View Gene Set | 0.0006389 | 25 | 0.0145 | 20 | Genes in module_42 | www.broad.mit.e... |
Broad module_110 | View Gene Set | 0.0007469 | 15 | 0.01615 | 21 | Genes in module_110 | www.broad.mit.e... |
Broad module_77 | View Gene Set | 0.0007863 | 28 | 0.01623 | 22 | Genes in module_77 | www.broad.mit.e... |
Broad module_233 | View Gene Set | 0.001159 | 22 | 0.02287 | 23 | Genes in module_233 | www.broad.mit.e... |
Broad module_50 | View Gene Set | 0.001286 | 13 | 0.02433 | 24 | Genes in module_50 | www.broad.mit.e... |
Broad module_155 | View Gene Set | 0.001476 | 25 | 0.02652 | 25 | Genes in module_155 | www.broad.mit.e... |
Broad module_278 | View Gene Set | 0.001519 | 34 | 0.02652 | 25 | Genes in module_278 | www.broad.mit.e... |
Broad module_115 | View Gene Set | 0.001725 | 27 | 0.02901 | 27 | Genes in module_115 | www.broad.mit.e... |
Broad module_81 | View Gene Set | 0.002426 | 20 | 0.03934 | 28 | Genes in module_81 | www.broad.mit.e... |
Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
Broad CELLULAR_PROTEIN_METABOLIC_PROCESS | View Gene Set | 7.826e-08 | 1085 | 4.448e-05 | 1 | Genes annotated by the GO term GO:0044267. The chemical reactions and pathways involving a specific protein rather than of proteins in general occurring at the level of an individual cell. Includes protein modification. | www.broad.mit.e... |
Broad CELLULAR_MACROMOLECULE_METABOLIC_PROCESS | View Gene Set | 1.078e-07 | 1099 | 4.448e-05 | 1 | Genes annotated by the GO term GO:0044260. The chemical reactions and pathways involving macromolecules large molecules including proteins nucleic acids and carbohydrates as carried out by individual cells. | www.broad.mit.e... |
Broad INTRACELLULAR_TRANSPORT | View Gene Set | 1.789e-07 | 271 | 4.919e-05 | 3 | Genes annotated by the GO term GO:0046907. The directed movement of substances within a cell. | www.broad.mit.e... |
Broad PROTEIN_METABOLIC_PROCESS | View Gene Set | 7.482e-07 | 1198 | 0.0001543 | 4 | Genes annotated by the GO term GO:0019538. The chemical reactions and pathways involving a specific protein rather than of proteins in general. Includes protein modification. | www.broad.mit.e... |
Broad BIOSYNTHETIC_PROCESS | View Gene Set | 4.488e-06 | 459 | 0.0007405 | 5 | Genes annotated by the GO term GO:0009058. The energy-requiring part of metabolism in which simpler substances are transformed into more complex ones as in growth and other biosynthetic processes. | www.broad.mit.e... |
Broad INTRACELLULAR_PROTEIN_TRANSPORT | View Gene Set | 1.682e-05 | 138 | 0.002313 | 6 | Genes annotated by the GO term GO:0006886. The directed movement of proteins in a cell including the movement of proteins between specific compartments or structures within a cell such as organelles of a eukaryotic cell. | www.broad.mit.e... |
Broad TRANSLATIONAL_INITIATION | View Gene Set | 3.334e-05 | 39 | 0.003438 | 7 | Genes annotated by the GO term GO:0006413. The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome mRNA and an initiation complex that contains the first aminoacyl-tRNA. | www.broad.mit.e... |
Broad PROTEIN_TRANSPORT | View Gene Set | 2.988e-05 | 150 | 0.003438 | 7 | Genes annotated by the GO term GO:0015031. The directed movement of proteins into out of within or between cells. | www.broad.mit.e... |
Broad PROTEIN_CATABOLIC_PROCESS | View Gene Set | 3.819e-05 | 68 | 0.0035 | 9 | Genes annotated by the GO term GO:0030163. The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native active configuration with or without the hydrolysis of peptide bonds. | www.broad.mit.e... |
Broad CELLULAR_PROTEIN_CATABOLIC_PROCESS | View Gene Set | 6.657e-05 | 58 | 0.005492 | 10 | Genes annotated by the GO term GO:0044257. The chemical reactions and pathways resulting in the breakdown of a protein by individual cells. | www.broad.mit.e... |
Broad CELLULAR_BIOSYNTHETIC_PROCESS | View Gene Set | 0.0001046 | 311 | 0.007846 | 11 | Genes annotated by the GO term GO:0044249. The chemical reactions and pathways resulting in the formation of substances carried out by individual cells. | www.broad.mit.e... |
Broad ESTABLISHMENT_OF_CELLULAR_LOCALIZATION | View Gene Set | 0.0001274 | 342 | 0.007885 | 12 | Genes annotated by the GO term GO:0051649. The directed movement of a substance or cellular entity such as a protein complex or organelle to a specific location within or in the membrane of a cell. | www.broad.mit.e... |
Broad REGULATION_OF_CELLULAR_COMPONENT_ORGANIZATION_AND_BIOGENESIS | View Gene Set | 0.0001351 | 124 | 0.007885 | 12 | Genes annotated by the GO term GO:0051128. Any process that modulates the frequency rate or extent of the processes involved in the formation arrangement of constituent parts or disassembly of cell structures including the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope. | www.broad.mit.e... |
Broad MITOCHONDRION_ORGANIZATION_AND_BIOGENESIS | View Gene Set | 0.0001256 | 47 | 0.007885 | 12 | Genes annotated by the GO term GO:0007005. A process that is carried out at the cellular level which results in the formation arrangement of constituent parts or disassembly of a mitochondrion; includes mitochondrial morphology and distribution and replication of the mitochondrial genome as well as synthesis of new mitochondrial components. | www.broad.mit.e... |
Broad MACROMOLECULE_BIOSYNTHETIC_PROCESS | View Gene Set | 0.0001434 | 313 | 0.007885 | 12 | Genes annotated by the GO term GO:0009059. The chemical reactions and pathways resulting in the formation of macromolecules large molecules including proteins nucleic acids and carbohydrates. | www.broad.mit.e... |
Broad RIBONUCLEOPROTEIN_COMPLEX_BIOGENESIS_AND_ASSEMBLY | View Gene Set | 0.000156 | 74 | 0.008044 | 16 | Genes annotated by the GO term GO:0022613. The cellular process by which a complex containing RNA and proteins is synthesized aggregates and bonds together. | www.broad.mit.e... |
Broad GOLGI_VESICLE_TRANSPORT | View Gene Set | 0.0001721 | 47 | 0.008229 | 17 | Genes annotated by the GO term GO:0048193. The directed movement of substances into out of or within the Golgi apparatus mediated by vesicles. | www.broad.mit.e... |
Broad CELLULAR_LOCALIZATION | View Gene Set | 0.0001796 | 360 | 0.008229 | 17 | Genes annotated by the GO term GO:0051641. The processes by which a substance or cellular entity such as a protein complex or organelle is transported to and/or maintained in a specific location within or in the membrane of a cell. | www.broad.mit.e... |
Broad BIOPOLYMER_CATABOLIC_PROCESS | View Gene Set | 0.0001972 | 115 | 0.008562 | 19 | Genes annotated by the GO term GO:0043285. The chemical reactions and pathways resulting in the breakdown of biopolymers long repeating chains of monomers found in nature e.g. polysaccharides and proteins. | www.broad.mit.e... |
Broad TRANSLATION | View Gene Set | 0.0002464 | 177 | 0.01016 | 20 | Genes annotated by the GO term GO:0006412. The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein. | www.broad.mit.e... |
Broad PROTEIN_TARGETING | View Gene Set | 0.0002626 | 103 | 0.01032 | 21 | Genes annotated by the GO term GO:0006605. The process of targeting specific proteins to particular membrane-bound subcellular organelles. Usually requires an organelle specific protein sequence motif. | www.broad.mit.e... |
Broad PROTEOLYSIS | View Gene Set | 0.0002966 | 187 | 0.01112 | 22 | Genes annotated by the GO term GO:0006508. The hydrolysis of a peptide bond or bonds within a protein. | www.broad.mit.e... |
Broad PROTEIN_LOCALIZATION | View Gene Set | 0.0004166 | 207 | 0.01494 | 23 | Genes annotated by the GO term GO:0008104. The processes by which a protein is transported to or maintained in a specific location. | www.broad.mit.e... |
Broad PEROXISOME_ORGANIZATION_AND_BIOGENESIS | View Gene Set | 0.0005186 | 15 | 0.01723 | 24 | Genes annotated by the GO term GO:0007031. A process that is carried out at the cellular level which results in the formation arrangement of constituent parts or disassembly of a peroxisome. | www.broad.mit.e... |
Broad PROTEIN_RNA_COMPLEX_ASSEMBLY | View Gene Set | 0.0005221 | 59 | 0.01723 | 24 | Genes annotated by the GO term GO:0022618. The aggregation arrangement and bonding together of proteins and RNA molecules to form a ribonucleoprotein complex. | www.broad.mit.e... |
Broad ESTABLISHMENT_OF_PROTEIN_LOCALIZATION | View Gene Set | 0.0007364 | 183 | 0.02337 | 26 | Genes annotated by the GO term GO:0045184. The directed movement of a protein to a specific location. | www.broad.mit.e... |
Broad REGULATION_OF_TRANSLATIONAL_INITIATION | View Gene Set | 0.0007852 | 31 | 0.02399 | 27 | Genes annotated by the GO term GO:0006446. Any process that modulates the frequency rate or extent of translational initiation. | www.broad.mit.e... |
Broad PROTEIN_TARGETING_TO_MEMBRANE | View Gene Set | 0.0008341 | 11 | 0.02458 | 28 | Genes annotated by the GO term GO:0006612. The process of directing proteins towards a membrane using signals contained within the protein. | www.broad.mit.e... |
Broad PROTEIN_TARGETING_TO_MITOCHONDRION | View Gene Set | 0.0008648 | 10 | 0.0246 | 29 | Genes annotated by the GO term GO:0006626. The process of directing proteins towards and into the mitochondrion mediated by mitochondrial proteins that recognize signals contained within the imported protein. | www.broad.mit.e... |
Broad PROTEIN_FOLDING | View Gene Set | 0.001787 | 56 | 0.04914 | 30 | Genes annotated by the GO term GO:0006457. The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure. | www.broad.mit.e... |
Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
Broad CYTOPLASMIC_PART | View Gene Set | 6.498e-14 | 1350 | 1.101e-11 | 1 | Genes annotated by the GO term GO:0044444. Any constituent part of the cytoplasm all of the contents of a cell excluding the plasma membrane and nucleus but including other subcellular structures. | www.broad.mit.e... |
Broad MITOCHONDRION | View Gene Set | 9.453e-14 | 335 | 1.101e-11 | 1 | Genes annotated by the GO term GO:0005739. A semiautonomous self replicating organelle that occurs in varying numbers shapes and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration. | www.broad.mit.e... |
Broad CYTOPLASM | View Gene Set | 1.595e-12 | 2054 | 1.239e-10 | 3 | Genes annotated by the GO term GO:0005737. All of the contents of a cell excluding the plasma membrane and nucleus but including other subcellular structures. | www.broad.mit.e... |
Broad MITOCHONDRIAL_PART | View Gene Set | 4.291e-11 | 140 | 2.5e-09 | 4 | Genes annotated by the GO term GO:0044429. Any constituent part of a mitochondrion a semiautonomous self replicating organelle that occurs in varying numbers shapes and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration. | www.broad.mit.e... |
Broad ORGANELLE_MEMBRANE | View Gene Set | 1.483e-09 | 290 | 6.911e-08 | 5 | Genes annotated by the GO term GO:0031090. The lipid bilayer surrounding an organelle. | www.broad.mit.e... |
Broad MITOCHONDRIAL_MEMBRANE_PART | View Gene Set | 5.818e-09 | 52 | 2.259e-07 | 6 | Genes annotated by the GO term GO:0044455. Any constituent part of the mitochondrial membrane either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope. | www.broad.mit.e... |
Broad MITOCHONDRIAL_MEMBRANE | View Gene Set | 3.495e-08 | 85 | 1.07e-06 | 7 | Genes annotated by the GO term GO:0031966. Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope. | www.broad.mit.e... |
Broad ENVELOPE | View Gene Set | 4.594e-08 | 165 | 1.07e-06 | 7 | Genes annotated by the GO term GO:0031975. A multilayered structure surrounding all or part of a cell; encompasses one or more lipid bilayers and may include a cell wall layer also includes the space between layers. | www.broad.mit.e... |
Broad ORGANELLE_ENVELOPE | View Gene Set | 4.594e-08 | 165 | 1.07e-06 | 7 | Genes annotated by the GO term GO:0031967. A double membrane structure enclosing an organelle including two lipid bilayers and the region between them. In some cases an organelle envelope may have more than two membranes. | www.broad.mit.e... |
Broad MITOCHONDRIAL_ENVELOPE | View Gene Set | 4.006e-08 | 95 | 1.07e-06 | 7 | Genes annotated by the GO term GO:0005740. The double lipid bilayer enclosing the mitochondrion and separating its contents from the cell cytoplasm; includes the intermembrane space. | www.broad.mit.e... |
Broad ORGANELLE_PART | View Gene Set | 7.553e-08 | 1149 | 1.6e-06 | 11 | Genes annotated by the GO term GO:0044422. Any constituent part of an organelle an organized structure of distinctive morphology and function. Includes constituent parts of the nucleus mitochondria plastids vacuoles vesicles ribosomes and the cytoskeleton but excludes the plasma membrane. | www.broad.mit.e... |
Broad INTRACELLULAR_ORGANELLE_PART | View Gene Set | 1.005e-07 | 1144 | 1.952e-06 | 12 | Genes annotated by the GO term GO:0044446. A constituent part of an intracellular organelle an organized structure of distinctive morphology and function occurring within the cell. Includes constituent parts of the nucleus mitochondria plastids vacuoles vesicles ribosomes and the cytoskeleton but excludes the plasma membrane. | www.broad.mit.e... |
Broad MITOCHONDRIAL_INNER_MEMBRANE | View Gene Set | 2.038e-06 | 66 | 3.652e-05 | 13 | Genes annotated by the GO term GO:0005743. The inner i.e. lumen-facing lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae. | www.broad.mit.e... |
Broad ORGANELLE_INNER_MEMBRANE | View Gene Set | 4.721e-06 | 74 | 7.858e-05 | 14 | Genes annotated by the GO term GO:0019866. The inner i.e. lumen-facing lipid bilayer of an organelle envelope; usually highly selective to most ions and metabolites. | www.broad.mit.e... |
Broad ENDOPLASMIC_RETICULUM | View Gene Set | 7.947e-06 | 282 | 0.0001234 | 15 | Genes annotated by the GO term GO:0005783. The irregular network of unit membranes visible only by electron microscopy that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels which are often expanded into slitlike cavities called cisternae. The ER takes two forms rough (or granular) with ribosomes adhering to the outer surface and smooth (with no ribosomes attached). | www.broad.mit.e... |
Broad ORGANELLE_LUMEN | View Gene Set | 1.033e-05 | 434 | 0.0001416 | 16 | Genes annotated by the GO term GO:0043233. The volume enclosed by the membranes of a particular organelle e.g. endoplasmic reticulum lumen or the space between the two lipid bilayers of a double membrane surrounding an organelle e.g. nuclear membrane lumen. | www.broad.mit.e... |
Broad MEMBRANE_ENCLOSED_LUMEN | View Gene Set | 1.033e-05 | 434 | 0.0001416 | 16 | Genes annotated by the GO term GO:0031974. The enclosed volume within a sealed membrane or between two sealed membranes. | www.broad.mit.e... |
Broad MITOCHONDRIAL_MATRIX | View Gene Set | 0.0001199 | 46 | 0.001397 | 18 | Genes annotated by the GO term GO:0005759. The gel-like material with considerable fine structure that lies in the matrix space or lumen of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and in some organisms the enzymes concerned with fatty-acid oxidation. | www.broad.mit.e... |
Broad MITOCHONDRIAL_LUMEN | View Gene Set | 0.0001199 | 46 | 0.001397 | 18 | Genes annotated by the GO term GO:0031980. The volume enclosed by the mitochondrial inner membrane. | www.broad.mit.e... |
Broad ER_GOLGI_INTERMEDIATE_COMPARTMENT | View Gene Set | 0.0001119 | 22 | 0.001397 | 18 | Genes annotated by the GO term GO:0005793. A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex with a distinctive membrane protein composition; involved in ER-to-Golgi transport. | www.broad.mit.e... |
Broad NADH_DEHYDROGENASE_COMPLEX | View Gene Set | 0.0003784 | 15 | 0.003833 | 21 | Genes annotated by the GO term GO:0030964. An integral membrane complex that possesses NADH oxidoreductase activity. The complex is one of the components of the electron transport chain. It catalyses the transfer of a pair of electrons from NADH to a quinone. | www.broad.mit.e... |
Broad MITOCHONDRIAL_RESPIRATORY_CHAIN_COMPLEX_I | View Gene Set | 0.0003784 | 15 | 0.003833 | 21 | Genes annotated by the GO term GO:0005747. A part of the respiratory chain located in the mitochondrion. It contains about 25 different polypeptide subunits including NADH dehydrogenase (ubiquinone) flavin mononucleotide and several different iron-sulfur clusters containing non-heme iron. The iron undergoes oxidation-reduction between Fe(II) and Fe(III) and catalyzes proton translocation linked to the oxidation of NADH by ubiquinone. | www.broad.mit.e... |
Broad RESPIRATORY_CHAIN_COMPLEX_I | View Gene Set | 0.0003784 | 15 | 0.003833 | 21 | Genes annotated by the GO term GO:0045271. Respiratory chain complex I is an enzyme of the respiratory chain. It consists of at least 34 polypeptide chains and is L-shaped with a horizontal arm lying in the membrane and a vertical arm that projects into the matrix. The electrons of NADH enter the chain at this complex. | www.broad.mit.e... |
Broad NUCLEOLAR_PART | View Gene Set | 0.0004042 | 16 | 0.003924 | 24 | Genes annotated by the GO term GO:0044452. Any constituent part of a nucleolus a small dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein is not bounded by a limiting membrane and is not seen during mitosis. | www.broad.mit.e... |
Broad ORGANELLE_OUTER_MEMBRANE | View Gene Set | 0.0004704 | 24 | 0.004384 | 25 | Genes annotated by the GO term GO:0031968. The outer i.e. cytoplasm-facing lipid bilayer of an organelle envelope. | www.broad.mit.e... |
Broad MITOCHONDRIAL_OUTER_MEMBRANE | View Gene Set | 0.0005343 | 18 | 0.004446 | 26 | Genes annotated by the GO term GO:0005741. The outer i.e. cytoplasm-facing lipid bilayer of the mitochondrial envelope. | www.broad.mit.e... |
Broad MITOCHONDRIAL_RESPIRATORY_CHAIN | View Gene Set | 0.0005027 | 24 | 0.004446 | 26 | Genes annotated by the GO term GO:0005746. The protein complexes that form the mitochondrial electron transport system (the respiratory chain). Complexes I III and IV can transport protons if embedded in an oriented membrane such as an intact mitochondrial inner membrane. | www.broad.mit.e... |
Broad NUCLEOLUS | View Gene Set | 0.00052 | 116 | 0.004446 | 26 | Genes annotated by the GO term GO:0005730. A small dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein is not bounded by a limiting membrane and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA the processing of this RNA into 5.8S 18S and 28S components of ribosomal RNA and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome. | www.broad.mit.e... |
Broad OUTER_MEMBRANE | View Gene Set | 0.0005758 | 25 | 0.004626 | 29 | Genes annotated by the GO term GO:0019867. The external membrane of Gram-negative bacteria or certain organelles such as mitochondria and chloroplasts; freely permeable to most ions and metabolites. | www.broad.mit.e... |
Broad EUKARYOTIC_TRANSLATION_INITIATION_FACTOR_3_COMPLEX | View Gene Set | 0.0007564 | 10 | 0.005875 | 30 | Genes annotated by the GO term GO:0005852. A complex of several polypeptides that plays at least two important roles in protein synthesis: First eIF3 binds to the 40S ribosome and facilitates loading of the Met-tRNA/eIF2.GTP ternary complex to form the 43S preinitiation complex. Subsequently eIF3 apparently assists eIF4 in recruiting mRNAs to the 43S complex. | www.broad.mit.e... |
Broad PROTEASOME_COMPLEX | View Gene Set | 0.0008915 | 23 | 0.006701 | 31 | Genes annotated by the GO term GO:0000502. A large multisubunit complex which catalyzes protein degradation. This complex consists of the barrel shaped proteasome core complex and one or two associated proteins or complexes that act in regulating entry into or exit from the core. | www.broad.mit.e... |
Broad ORGANELLAR_RIBOSOME | View Gene Set | 0.001577 | 22 | 0.01113 | 32 | Genes annotated by the GO term GO:0000313. A ribosome contained within a subcellular organelle. | www.broad.mit.e... |
Broad MITOCHONDRIAL_RIBOSOME | View Gene Set | 0.001577 | 22 | 0.01113 | 32 | Genes annotated by the GO term GO:0005761. A ribosome found in the mitochondrion of a eukaryotic cell; contains a characteristic set of proteins distinct from those of cytosolic ribosomes. | www.broad.mit.e... |
Broad NUCLEAR_LUMEN | View Gene Set | 0.002167 | 365 | 0.01485 | 34 | Genes annotated by the GO term GO:0031981. The volume enclosed by the nuclear inner membrane. | www.broad.mit.e... |
Broad OLIGOSACCHARYL_TRANSFERASE_COMPLEX | View Gene Set | 0.002316 | 9 | 0.01542 | 35 | Genes annotated by the GO term GO:0008250. A multisubunit protein complex in the endoplasmic reticulum membrane of eukaryotes that transfers lipid-linked oligosaccharide precursor to asparagine residues on nascent proteins; includes at least nine different subunits at least in yeast. | www.broad.mit.e... |
Broad NUCLEAR_PART | View Gene Set | 0.002882 | 543 | 0.01767 | 36 | Genes annotated by the GO term GO:0044428. Any constituent part of the nucleus a membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. | www.broad.mit.e... |
Broad MACROMOLECULAR_COMPLEX | View Gene Set | 0.002882 | 914 | 0.01767 | 36 | Genes annotated by the GO term GO:0032991. A stable assembly of two or more macromolecules i.e. proteins nucleic acids carbohydrates or lipids in which the constituent parts function together. | www.broad.mit.e... |
Broad ENDOPLASMIC_RETICULUM_PART | View Gene Set | 0.002782 | 93 | 0.01767 | 36 | Genes annotated by the GO term GO:0044432. Any constituent part of the endoplasmic reticulum the irregular network of unit membranes visible only by electron microscopy that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels which are often expanded into slitlike cavities called cisternae. | www.broad.mit.e... |
Broad GOLGI_APPARATUS | View Gene Set | 0.003236 | 222 | 0.01933 | 39 | Genes annotated by the GO term GO:0005794. A compound membranous cytoplasmic organelle of eukaryotic cells consisting of flattened ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle while in invertebrates and plants where they are known usually as dictyosomes there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis in the vicinity of the cis face trans in the vicinity of the trans face and medial lying between the cis and trans regions. | www.broad.mit.e... |
Broad RIBONUCLEOPROTEIN_COMPLEX | View Gene Set | 0.003659 | 129 | 0.02087 | 40 | Genes annotated by the GO term GO:0030529. A macromolecular complex containing both protein and RNA molecules. | www.broad.mit.e... |
Broad ENDOMEMBRANE_SYSTEM | View Gene Set | 0.003673 | 213 | 0.02087 | 40 | Genes annotated by the GO term GO:0012505. A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum Golgi bodies vesicles cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles. | www.broad.mit.e... |
Broad ORGANELLAR_SMALL_RIBOSOMAL_SUBUNIT | View Gene Set | 0.004262 | 11 | 0.02257 | 42 | Genes annotated by the GO term GO:0000314. The smaller of the two subunits of an organellar ribosome. | www.broad.mit.e... |
Broad MITOCHONDRIAL_SMALL_RIBOSOMAL_SUBUNIT | View Gene Set | 0.004262 | 11 | 0.02257 | 42 | Genes annotated by the GO term GO:0005763. The smaller of the two subunits of a mitochondrial ribosome. | www.broad.mit.e... |
Broad SMALL_RIBOSOMAL_SUBUNIT | View Gene Set | 0.004262 | 11 | 0.02257 | 42 | Genes annotated by the GO term GO:0015935. The smaller of the two subunits of a ribosome. | www.broad.mit.e... |
Broad PEROXISOMAL_MEMBRANE | View Gene Set | 0.004697 | 12 | 0.02328 | 45 | Genes annotated by the GO term GO:0005778. The lipid bilayer surrounding a peroxisome. | www.broad.mit.e... |
Broad MICROBODY_MEMBRANE | View Gene Set | 0.004697 | 12 | 0.02328 | 45 | Genes annotated by the GO term GO:0031903. The lipid bilayer surrounding a microbody. | www.broad.mit.e... |
Broad RIBOSOMAL_SUBUNIT | View Gene Set | 0.004599 | 20 | 0.02328 | 45 | Genes annotated by the GO term GO:0033279. Either of the two ribonucleoprotein complexes that associate to form a ribosome. | www.broad.mit.e... |
Broad NUCLEAR_SPECK | View Gene Set | 0.005783 | 10 | 0.02807 | 48 | Genes annotated by the GO term GO:0016607. A discrete extra-nucleolar subnuclear domain 20-50 in number in which splicing factors are seen to be localized by immunofluorescence microscopy. | www.broad.mit.e... |
Broad NUCLEAR_ENVELOPE_ENDOPLASMIC_RETICULUM_NETWORK | View Gene Set | 0.006984 | 91 | 0.03321 | 49 | Genes annotated by the GO term GO:0042175. The continuous network of membranes encompassing the outer nuclear membrane and the endoplasmic reticulum. | www.broad.mit.e... |
Broad MICROTUBULE | View Gene Set | 0.009937 | 31 | 0.0454 | 50 | Genes annotated by the GO term GO:0005874. Any of the long generally straight hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation e.g. in the spindle. | www.broad.mit.e... |
Broad NUCLEAR_MEMBRANE | View Gene Set | 0.009751 | 48 | 0.0454 | 50 | Genes annotated by the GO term GO:0031965. Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space. | www.broad.mit.e... |
Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
Broad TRANSLATION_INITIATION_FACTOR_ACTIVITY | View Gene Set | 4.158e-05 | 24 | 0.01646 | 1 | Genes annotated by the GO term GO:0003743. Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide. | www.broad.mit.e... |
Broad LIGASE_ACTIVITY_FORMING_CARBON_OXYGEN_BONDS | View Gene Set | 0.0002365 | 14 | 0.04682 | 2 | Genes annotated by the GO term GO:0016875. Catalysis of the ligation of two substances via a carbon-oxygen bond with concomitant breakage of a diphosphate linkage usually in a nucleoside triphosphate. | www.broad.mit.e... |
Broad TRANSLATION_FACTOR_ACTIVITY_NUCLEIC_ACID_BINDING | View Gene Set | 0.0003726 | 39 | 0.04919 | 3 | Genes annotated by the GO term GO:0008135. Functions during translation by binding nucleic acids during polypeptide synthesis at the ribosome. | www.broad.mit.e... |
Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
PMID 12429849 | View Gene Set | 6.752e-13 | 106 | 1.693e-09 | 1 | Functional proteomic analysis of human nucleolus. | www.ncbi.nlm.ni... |
PMID 11790298 | View Gene Set | 2.486e-09 | 208 | 2.077e-06 | 2 | Directed proteomic analysis of the human nucleolus. | www.ncbi.nlm.ni... |
PMID 12706105 | View Gene Set | 1.737e-09 | 182 | 2.077e-06 | 2 | Identification and characterization of over 100 mitochondrial ribosomal protein pseudogenes in the human genome. | www.ncbi.nlm.ni... |
PMID 15029244 | View Gene Set | 1.507e-08 | 57 | 9.442e-06 | 4 | Mammalian Cdh1/Fzr mediates its own degradation. | www.ncbi.nlm.ni... |
PMID 11543634 | View Gene Set | 3.086e-08 | 58 | 1.547e-05 | 5 | The human mitochondrial ribosomal protein genes: mapping of 54 genes to the chromosomes and implications for human disorders. | www.ncbi.nlm.ni... |
PMID 15635413 | View Gene Set | 6.94e-08 | 421 | 2.9e-05 | 6 | Nucleolar proteome dynamics. | www.ncbi.nlm.ni... |
PMID 17643375 | View Gene Set | 9.117e-08 | 391 | 3.265e-05 | 7 | Systematic analysis of the protein interaction network for the human transcription machinery reveals the identity of the 7SK capping enzyme. | www.ncbi.nlm.ni... |
PMID 17220478 | View Gene Set | 7.735e-07 | 63 | 0.0002424 | 8 | Proteomics analysis of the interactome of N-myc downstream regulated gene 1 and its interactions with the androgen response program in prostate cancer cells. | www.ncbi.nlm.ni... |
PMID 10893419 | View Gene Set | 1.766e-06 | 41 | 0.0003163 | 9 | Degradation of HIV-1 integrase by the N-end rule pathway. | www.ncbi.nlm.ni... |
PMID 11337588 | View Gene Set | 1.478e-06 | 17 | 0.0003163 | 9 | Promotion of NEDD-CUL1 conjugate cleavage by COP9 signalosome. | www.ncbi.nlm.ni... |
PMID 12419264 | View Gene Set | 1.766e-06 | 41 | 0.0003163 | 9 | The RTP site shared by the HIV-1 Tat protein and the 11S regulator subunit alpha is crucial for their effects on proteasome function including antigen processing. | www.ncbi.nlm.ni... |
PMID 14550573 | View Gene Set | 1.766e-06 | 41 | 0.0003163 | 9 | Human immunodeficiency virus-1 Tat protein interacts with distinct proteasomal alpha and beta subunits. | www.ncbi.nlm.ni... |
PMID 14564014 | View Gene Set | 1.183e-06 | 47 | 0.0003163 | 9 | Induction of APOBEC3G ubiquitination and degradation by an HIV-1 Vif-Cul5-SCF complex. | www.ncbi.nlm.ni... |
PMID 9079628 | View Gene Set | 1.766e-06 | 41 | 0.0003163 | 9 | HIV-1 tat inhibits the 20 S proteasome and its 11 S regulator-mediated activation. | www.ncbi.nlm.ni... |
PMID 11279123 | View Gene Set | 2.052e-06 | 31 | 0.000343 | 15 | The small subunit of the mammalian mitochondrial ribosome. Identification of the full complement of ribosomal proteins present. | www.ncbi.nlm.ni... |
PMID 10810093 | View Gene Set | 3.147e-06 | 151 | 0.000358 | 16 | Identification of novel human genes evolutionarily conserved in Caenorhabditis elegans by comparative proteomics. | www.ncbi.nlm.ni... |
PMID 12719574 | View Gene Set | 3.57e-06 | 42 | 0.000358 | 16 | Comprehensive investigation of the molecular defect in vif-deficient human immunodeficiency virus type 1 virions. | www.ncbi.nlm.ni... |
PMID 12750511 | View Gene Set | 3.57e-06 | 42 | 0.000358 | 16 | Hypermutation of HIV-1 DNA in the absence of the Vif protein. | www.ncbi.nlm.ni... |
PMID 12830140 | View Gene Set | 3.57e-06 | 42 | 0.000358 | 16 | DNA deamination: not just a trigger for antibody diversification but also a mechanism for defense against retroviruses. | www.ncbi.nlm.ni... |
PMID 12840737 | View Gene Set | 3.57e-06 | 42 | 0.000358 | 16 | Good to CU. | www.ncbi.nlm.ni... |
PMID 12914693 | View Gene Set | 3.57e-06 | 42 | 0.000358 | 16 | Death by deamination: a novel host restriction system for HIV-1. | www.ncbi.nlm.ni... |
PMID 12920286 | View Gene Set | 3.57e-06 | 42 | 0.000358 | 16 | Virology. Weapons of mutational destruction. | www.ncbi.nlm.ni... |
PMID 14614829 | View Gene Set | 3.57e-06 | 42 | 0.000358 | 16 | The Vif protein of HIV triggers degradation of the human antiretroviral DNA deaminase APOBEC3G. | www.ncbi.nlm.ni... |
PMID 9811770 | View Gene Set | 3.57e-06 | 42 | 0.000358 | 16 | An endogenous inhibitor of human immunodeficiency virus in human lymphocytes is overcome by the viral Vif protein. | www.ncbi.nlm.ni... |
PMID 9846577 | View Gene Set | 3.57e-06 | 42 | 0.000358 | 16 | Evidence for a newly discovered cellular anti-HIV-1 phenotype. | www.ncbi.nlm.ni... |
PMID 12167863 | View Gene Set | 5.232e-06 | 43 | 0.0003858 | 26 | Isolation of a human gene that inhibits HIV-1 infection and is suppressed by the viral Vif protein. | www.ncbi.nlm.ni... |
PMID 12808465 | View Gene Set | 5.232e-06 | 43 | 0.0003858 | 26 | The cytidine deaminase CEM15 induces hypermutation in newly synthesized HIV-1 DNA. | www.ncbi.nlm.ni... |
PMID 12808466 | View Gene Set | 5.232e-06 | 43 | 0.0003858 | 26 | Broad antiretroviral defence by human APOBEC3G through lethal editing of nascent reverse transcripts. | www.ncbi.nlm.ni... |
PMID 12809610 | View Gene Set | 5.232e-06 | 43 | 0.0003858 | 26 | DNA deamination mediates innate immunity to retroviral infection. | www.ncbi.nlm.ni... |
PMID 12970355 | View Gene Set | 5.232e-06 | 43 | 0.0003858 | 26 | The enzymatic activity of CEM15/Apobec-3G is essential for the regulation of the infectivity of HIV-1 virion but not a sole determinant of its antiviral activity. | www.ncbi.nlm.ni... |
PMID 14527406 | View Gene Set | 5.232e-06 | 43 | 0.0003858 | 26 | HIV-1 Vif blocks the antiviral activity of APOBEC3G by impairing both its translation and intracellular stability. | www.ncbi.nlm.ni... |
PMID 14528300 | View Gene Set | 5.232e-06 | 43 | 0.0003858 | 26 | The antiretroviral enzyme APOBEC3G is degraded by the proteasome in response to HIV-1 Vif. | www.ncbi.nlm.ni... |
PMID 14528301 | View Gene Set | 5.232e-06 | 43 | 0.0003858 | 26 | HIV-1 Vif protein binds the editing enzyme APOBEC3G and induces its degradation. | www.ncbi.nlm.ni... |
PMID 14557625 | View Gene Set | 5.232e-06 | 43 | 0.0003858 | 26 | The human immunodeficiency virus type 1 Vif protein reduces intracellular expression and inhibits packaging of APOBEC3G (CEM15) a cellular inhibitor of virus infectivity. | www.ncbi.nlm.ni... |
PMID 11285280 | View Gene Set | 6.636e-06 | 62 | 0.0004753 | 35 | Anaphase-promoting complex/cyclosome-dependent proteolysis of human cyclin A starts at the beginning of mitosis and is not subject to the spindle assembly checkpoint. | www.ncbi.nlm.ni... |
PMID 11031247 | View Gene Set | 8.242e-06 | 51 | 0.000574 | 36 | Secretory protein trafficking and organelle dynamics in living cells. | www.ncbi.nlm.ni... |
PMID 12481031 | View Gene Set | 1.015e-05 | 21 | 0.0006877 | 37 | CUL7: A DOC domain-containing cullin selectively binds Skp1.Fbx29 to form an SCF-like complex. | www.ncbi.nlm.ni... |
PMID 15231748 | View Gene Set | 1.053e-05 | 519 | 0.0006948 | 38 | Functional proteomics mapping of a human signaling pathway. | www.ncbi.nlm.ni... |
PMID 15461802 | View Gene Set | 1.532e-05 | 293 | 0.0009849 | 39 | A genome annotation-driven approach to cloning the human ORFeome. | www.ncbi.nlm.ni... |
PMID 12791267 | View Gene Set | 1.59e-05 | 50 | 0.0009879 | 40 | Prophase destruction of Emi1 by the SCF(betaTrCP/Slimb) ubiquitin ligase activates the anaphase promoting complex to allow progression beyond prometaphase. | www.ncbi.nlm.ni... |
PMID 19064571 | View Gene Set | 1.616e-05 | 75 | 0.0009879 | 40 | Polymorphisms in mitochondrial genes and prostate cancer risk. | www.ncbi.nlm.ni... |
PMID 11042152 | View Gene Set | 2.884e-05 | 315 | 0.001722 | 42 | Cloning and functional analysis of cDNAs with open reading frames for 300 previously undefined genes expressed in CD34+ hematopoietic stem/progenitor cells. | www.ncbi.nlm.ni... |
PMID 12859895 | View Gene Set | 3.012e-05 | 47 | 0.001756 | 43 | Species-specific exclusion of APOBEC3G from HIV-1 virions by Vif. | www.ncbi.nlm.ni... |
PMID 12588972 | View Gene Set | 3.481e-05 | 56 | 0.001984 | 44 | Transcript-selective translational silencing by gamma interferon is directed by a novel structural element in the ceruloplasmin mRNA 3' untranslated region. | www.ncbi.nlm.ni... |
PMID 12665801 | View Gene Set | 3.635e-05 | 261 | 0.002025 | 45 | Exploring proteomes and analyzing protein processing by mass spectrometric identification of sorted N-terminal peptides. | www.ncbi.nlm.ni... |
PMID 8811196 | View Gene Set | 4.383e-05 | 37 | 0.002389 | 46 | Structure and functions of the 20S and 26S proteasomes. | www.ncbi.nlm.ni... |
PMID 9151826 | View Gene Set | 4.515e-05 | 14 | 0.002408 | 47 | The Nef protein of human immunodeficiency virus type 1 enhances serine phosphorylation of the viral matrix. | www.ncbi.nlm.ni... |
PMID 12676794 | View Gene Set | 6.718e-05 | 33 | 0.003437 | 48 | The RNA polymerase II elongation complex. | www.ncbi.nlm.ni... |
PMID 14667819 | View Gene Set | 6.652e-05 | 112 | 0.003437 | 48 | Analysis of a high-throughput yeast two-hybrid system and its use to predict the function of intracellular proteins encoded within the human MHC class III region. | www.ncbi.nlm.ni... |
PMID 12611891 | View Gene Set | 7.622e-05 | 40 | 0.003822 | 50 | The subunit composition of the human NADH dehydrogenase obtained by rapid one-step immunopurification. | www.ncbi.nlm.ni... |
PMID 9878551 | View Gene Set | 8.038e-05 | 34 | 0.003951 | 51 | cDNA of eight nuclear encoded subunits of NADH:ubiquinone oxidoreductase: human complex I cDNA characterization completed. | www.ncbi.nlm.ni... |
PMID 15644312 | View Gene Set | 0.0001079 | 10 | 0.005105 | 52 | Dissection of the mitochondrial import and assembly pathway for human Tom40. | www.ncbi.nlm.ni... |
PMID 18063578 | View Gene Set | 0.0001066 | 31 | 0.005105 | 52 | The layered structure of human mitochondrial DNA nucleoids. | www.ncbi.nlm.ni... |
PMID 14743216 | View Gene Set | 0.0001572 | 132 | 0.007251 | 54 | A physical and functional map of the human TNF-alpha/NF-kappa B signal transduction pathway. | www.ncbi.nlm.ni... |
PMID 15308636 | View Gene Set | 0.0001591 | 25 | 0.007251 | 54 | Proteomics of endoplasmic reticulum-Golgi intermediate compartment (ERGIC) membranes from brefeldin A-treated HepG2 cells identifies ERGIC-32 a new cycling protein that interacts with human Erv46. | www.ncbi.nlm.ni... |
PMID 10591208 | View Gene Set | 0.0001838 | 299 | 0.008226 | 56 | The DNA sequence of human chromosome 22. | www.ncbi.nlm.ni... |
PMID 17588522 | View Gene Set | 0.0001871 | 14 | 0.008231 | 57 | E3-independent monoubiquitination of ubiquitin-binding proteins. | www.ncbi.nlm.ni... |
PMID 11252894 | View Gene Set | 0.0002086 | 44 | 0.008716 | 58 | Three ways to make a vesicle. | www.ncbi.nlm.ni... |
PMID 16806233 | View Gene Set | 0.0002078 | 66 | 0.008716 | 58 | Identifying leukocyte gene expression patterns associated with plasma lipid levels in human subjects. | www.ncbi.nlm.ni... |
PMID 19450687 | View Gene Set | 0.0002086 | 11 | 0.008716 | 58 | High-resolution mapping of the protein interaction network for the human transcription machinery and affinity purification of RNA polymerase II-associated complexes. | www.ncbi.nlm.ni... |
PMID 10230407 | View Gene Set | 0.0002434 | 12 | 0.01 | 61 | ROC1 a homolog of APC11 represents a family of cullin partners with an associated ubiquitin ligase activity. | www.ncbi.nlm.ni... |
PMID 15592455 | View Gene Set | 0.0002538 | 317 | 0.01026 | 62 | Immunoaffinity profiling of tyrosine phosphorylation in cancer cells. | www.ncbi.nlm.ni... |
PMID 15302935 | View Gene Set | 0.0002592 | 773 | 0.01031 | 63 | Large-scale characterization of HeLa cell nuclear phosphoproteins. | www.ncbi.nlm.ni... |
PMID 19549727 | View Gene Set | 0.0002741 | 10 | 0.01074 | 64 | Analysis of the human E2 ubiquitin conjugating enzyme protein interaction network. | www.ncbi.nlm.ni... |
PMID 10500174 | View Gene Set | 0.0003028 | 10 | 0.01168 | 65 | Expression of the CDH1-associated form of the anaphase-promoting complex in postmitotic neurons. | www.ncbi.nlm.ni... |
PMID 12609982 | View Gene Set | 0.0003142 | 11 | 0.01176 | 66 | TIP120A associates with cullins and modulates ubiquitin ligase activity. | www.ncbi.nlm.ni... |
PMID 18660489 | View Gene Set | 0.0003098 | 250 | 0.01176 | 66 | Multiple genetic variants along candidate pathways influence plasma high-density lipoprotein cholesterol concentrations. | www.ncbi.nlm.ni... |
PMID 11500364 | View Gene Set | 0.0004043 | 11 | 0.01467 | 68 | Regulation of elongation factor 2 kinase by p90(RSK1) and p70 S6 kinase. | www.ncbi.nlm.ni... |
PMID 16956762 | View Gene Set | 0.0004096 | 10 | 0.01467 | 68 | Insights into COPI coat assembly and function in living cells. | www.ncbi.nlm.ni... |
PMID 19183483 | View Gene Set | 0.0004021 | 17 | 0.01467 | 68 | Screening and association testing of common coding variation in steroid hormone receptor co-activator and co-repressor genes in relation to breast cancer risk: the Multiethnic Cohort. | www.ncbi.nlm.ni... |
PMID 9222609 | View Gene Set | 0.0004469 | 10 | 0.01578 | 71 | A pathway of multi-chaperone interactions common to diverse regulatory proteins: estrogen receptor Fes tyrosine kinase heat shock transcription factor Hsf1 and the aryl hydrocarbon receptor. | www.ncbi.nlm.ni... |
PMID 9674425 | View Gene Set | 0.0004978 | 11 | 0.01733 | 72 | Histone-like TAFs within the PCAF histone acetylase complex. | www.ncbi.nlm.ni... |
PMID 10617616 | View Gene Set | 0.0005196 | 25 | 0.01785 | 73 | Requirement for a kinase-specific chaperone pathway in the production of a Cdk9/cyclin T1 heterodimer responsible for P-TEFb-mediated tat stimulation of HIV-1 transcription. | www.ncbi.nlm.ni... |
PMID 16501559 | View Gene Set | 0.0005729 | 12 | 0.01941 | 74 | Analysis of the human protein interactome and comparison with yeast worm and fly interaction datasets. | www.ncbi.nlm.ni... |
PMID 11124703 | View Gene Set | 0.0006484 | 18 | 0.02167 | 75 | Characterization of 16 novel human genes showing high similarity to yeast sequences. | www.ncbi.nlm.ni... |
PMID 8849451 | View Gene Set | 0.0006697 | 46 | 0.02209 | 76 | Tat-SF1: cofactor for stimulation of transcriptional elongation by HIV-1 Tat. | www.ncbi.nlm.ni... |
PMID 15189447 | View Gene Set | 0.000704 | 11 | 0.02263 | 77 | Interaction of U-box-type ubiquitin-protein ligases (E3s) with molecular chaperones. | www.ncbi.nlm.ni... |
PMID 17168834 | View Gene Set | 0.0006997 | 18 | 0.02263 | 77 | Will diverse Tat interactions lead to novel antiretroviral drug targets? | www.ncbi.nlm.ni... |
PMID 10922056 | View Gene Set | 0.0007593 | 12 | 0.02332 | 79 | The RING-H2 finger protein APC11 and the E2 enzyme UBC4 are sufficient to ubiquitinate substrates of the anaphase-promoting complex. | www.ncbi.nlm.ni... |
PMID 11080476 | View Gene Set | 0.0007966 | 87 | 0.02332 | 79 | Acetylation of HIV-1 Tat by CBP/P300 increases transcription of integrated HIV-1 genome and enhances binding to core histones. | www.ncbi.nlm.ni... |
PMID 11714285 | View Gene Set | 0.0008187 | 11 | 0.02332 | 79 | The appended C-domain of human methionyl-tRNA synthetase has a tRNA-sequestering function. | www.ncbi.nlm.ni... |
PMID 12956947 | View Gene Set | 0.0007582 | 15 | 0.02332 | 79 | TPR subunits of the anaphase-promoting complex mediate binding to the activator protein CDH1. | www.ncbi.nlm.ni... |
PMID 16055448 | View Gene Set | 0.0008187 | 11 | 0.02332 | 79 | The C-terminal appended domain of human cytosolic leucyl-tRNA synthetase is indispensable in its interaction with arginyl-tRNA synthetase in the multi-tRNA synthetase complex. | www.ncbi.nlm.ni... |
PMID 8052601 | View Gene Set | 0.0008187 | 11 | 0.02332 | 79 | Human cytoplasmic isoleucyl-tRNA synthetase: selective divergence of the anticodon-binding domain and acquisition of a new structural unit. | www.ncbi.nlm.ni... |
PMID 8078941 | View Gene Set | 0.0008187 | 11 | 0.02332 | 79 | Evolution of the Glx-tRNA synthetase family: the glutaminyl enzyme as a case of horizontal gene transfer. | www.ncbi.nlm.ni... |
PMID 8188258 | View Gene Set | 0.0008187 | 11 | 0.02332 | 79 | The human EPRS locus (formerly the QARS locus): a gene encoding a class I and a class II aminoacyl-tRNA synthetase. | www.ncbi.nlm.ni... |
PMID 8449960 | View Gene Set | 0.0008187 | 11 | 0.02332 | 79 | Expression of human aspartyl-tRNA synthetase in Escherichia coli. Functional analysis of the N-terminal putative amphiphilic helix. | www.ncbi.nlm.ni... |
PMID 9278442 | View Gene Set | 0.0008187 | 11 | 0.02332 | 79 | Human lysyl-tRNA synthetase accepts nucleotide 73 variants and rescues Escherichia coli double-defective mutant. | www.ncbi.nlm.ni... |
PMID 11829477 | View Gene Set | 0.0008712 | 13 | 0.02454 | 89 | Interaction network of human aminoacyl-tRNA synthetases and subunits of elongation factor 1 complex. | www.ncbi.nlm.ni... |
PMID 18715871 | View Gene Set | 0.0009358 | 20 | 0.02493 | 90 | PP4R4/KIAA1622 forms a novel stable cytosolic complex with phosphoprotein phosphatase 4. | www.ncbi.nlm.ni... |
PMID 1939271 | View Gene Set | 0.0009357 | 39 | 0.02493 | 90 | Abortive initiation is increased only for the weakest members of a set of down mutants of the adenovirus 2 major late promoter. | www.ncbi.nlm.ni... |
PMID 2449431 | View Gene Set | 0.0009357 | 39 | 0.02493 | 90 | ATP activates transcription initiation from promoters by RNA polymerase II in a reversible step prior to RNA synthesis. | www.ncbi.nlm.ni... |
PMID 8946909 | View Gene Set | 0.0009357 | 39 | 0.02493 | 90 | The general transcription factors of RNA polymerase II. | www.ncbi.nlm.ni... |
PMID 9405375 | View Gene Set | 0.0009357 | 39 | 0.02493 | 90 | Three transitions in the RNA polymerase II transcription complex during initiation. | www.ncbi.nlm.ni... |
PMID 9878398 | View Gene Set | 0.0009446 | 13 | 0.02493 | 90 | Macromolecular assemblage of aminoacyl-tRNA synthetases: identification of protein-protein interactions and characterization of a core protein. | www.ncbi.nlm.ni... |
PMID 12522145 | View Gene Set | 0.001041 | 19 | 0.02718 | 96 | Identification of targets for calcium signaling through the copine family of proteins. Characterization of a coiled-coil copine-binding motif. | www.ncbi.nlm.ni... |
PMID 10548110 | View Gene Set | 0.001086 | 16 | 0.02728 | 97 | Accumulation of cyclin B1 requires E2F and cyclin-A-dependent rearrangement of the anaphase-promoting complex. | www.ncbi.nlm.ni... |
PMID 11340163 | View Gene Set | 0.001086 | 16 | 0.02728 | 97 | A conserved cyclin-binding domain determines functional interplay between anaphase-promoting complex-Cdh1 and cyclin A-Cdk2 during cell cycle progression. | www.ncbi.nlm.ni... |
PMID 11551941 | View Gene Set | 0.001111 | 26 | 0.02728 | 97 | The large subunit of the mammalian mitochondrial ribosome. Analysis of the complement of ribosomal proteins present. | www.ncbi.nlm.ni... |
PMID 12732143 | View Gene Set | 0.001087 | 14 | 0.02728 | 97 | The ubiquitin ligase activity in the DDB2 and CSA complexes is differentially regulated by the COP9 signalosome in response to DNA damage. | www.ncbi.nlm.ni... |
PMID 8934526 | View Gene Set | 0.001104 | 25 | 0.02728 | 97 | Enhanced processivity of RNA polymerase II triggered by Tat-induced phosphorylation of its carboxy-terminal domain. | www.ncbi.nlm.ni... |
PMID 9150948 | View Gene Set | 0.001088 | 15 | 0.02728 | 97 | A two-dimensional gel database of human colon carcinoma proteins. | www.ncbi.nlm.ni... |
PMID 9852112 | View Gene Set | 0.001121 | 20 | 0.02728 | 97 | Immunoaffinity purification and functional characterization of human transcription factor IIH and RNA polymerase II from clonal cell lines that conditionally express epitope-tagged subunits of the multiprotein complexes. | www.ncbi.nlm.ni... |
PMID 11402041 | View Gene Set | 0.001268 | 16 | 0.03057 | 104 | Proteomic analysis of the mammalian mitochondrial ribosome. Identification of protein components in the 28 S small subunit. | www.ncbi.nlm.ni... |
PMID 12628923 | View Gene Set | 0.001312 | 12 | 0.03133 | 105 | Protein kinase CK2 and protein kinase D are associated with the COP9 signalosome. | www.ncbi.nlm.ni... |
PMID 14657027 | View Gene Set | 0.001347 | 74 | 0.03186 | 106 | Regulation of HIV-1 gene expression by histone acetylation and factor recruitment at the LTR promoter. | www.ncbi.nlm.ni... |
PMID 11438723 | View Gene Set | 0.001509 | 10 | 0.03535 | 107 | Visualization of biochemical networks in living cells. | www.ncbi.nlm.ni... |
PMID 9763677 | View Gene Set | 0.001683 | 15 | 0.03906 | 108 | Intron based radiation hybrid mapping of 15 complex I genes of the human electron transport chain. | www.ncbi.nlm.ni... |
PMID 16713569 | View Gene Set | 0.001711 | 570 | 0.03935 | 109 | A protein-protein interaction network for human inherited ataxias and disorders of Purkinje cell degeneration. | www.ncbi.nlm.ni... |
PMID 16097034 | View Gene Set | 0.001828 | 36 | 0.04114 | 110 | Global phosphoproteome analysis on human HepG2 hepatocytes using reversed-phase diagonal LC. | www.ncbi.nlm.ni... |
PMID 17322308 | View Gene Set | 0.001838 | 13 | 0.04114 | 110 | Structural characterization of the human eukaryotic initiation factor 3 protein complex by mass spectrometry. | www.ncbi.nlm.ni... |
PMID 18599441 | View Gene Set | 0.001838 | 13 | 0.04114 | 110 | Mass spectrometry reveals modularity and a complete subunit interaction map of the eukaryotic translation factor eIF3. | www.ncbi.nlm.ni... |
PMID 11113628 | View Gene Set | 0.001914 | 11 | 0.04245 | 113 | Modification of the composition of polycystin-1 multiprotein complexes by calcium and tyrosine phosphorylation. | www.ncbi.nlm.ni... |
PMID 15189156 | View Gene Set | 0.001985 | 88 | 0.04365 | 114 | The molecular mechanics of eukaryotic translation. | www.ncbi.nlm.ni... |
PMID 10713718 | View Gene Set | 0.002069 | 10 | 0.0451 | 115 | The HIV-1 vpr protein induces anoikis-resistance by modulating cell adhesion process and microfilament system assembly. | www.ncbi.nlm.ni... |
PMID 12535645 | View Gene Set | 0.002094 | 11 | 0.04526 | 116 | Structural determinants of Rab and Rab Escort Protein interaction: Rab family motifs define a conserved binding surface. | www.ncbi.nlm.ni... |
PMID 9822659 | View Gene Set | 0.002161 | 11 | 0.0463 | 117 | Characterization of cDNAs encoding the p44 and p35 subunits of human translation initiation factor eIF3. | www.ncbi.nlm.ni... |
PMID 14519125 | View Gene Set | 0.002302 | 12 | 0.04891 | 118 | Characterization of eIF3k: a newly discovered subunit of mammalian translation initiation factor elF3. | www.ncbi.nlm.ni... |
Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
Null chr22_47.5-52.5Mb | View Gene Set | 2.85e-05 | 21 | 0.03175 | 1 | Genomic tile: chr22 ; 47500001-52500001 Mb | genome.ucsc.edu... |
Null chr11_62.5-67.5Mb | View Gene Set | 0.0001103 | 119 | 0.03414 | 2 | Genomic tile: chr11 ; 62500001-67500001 Mb | genome.ucsc.edu... |
Null chr22_45-50Mb | View Gene Set | 9.293e-05 | 26 | 0.03414 | 2 | Genomic tile: chr22 ; 45000001-50000001 Mb | genome.ucsc.edu... |
Null chrX_115-120Mb | View Gene Set | 0.0001226 | 23 | 0.03414 | 2 | Genomic tile: chrX ; 115000001-120000001 Mb | genome.ucsc.edu... |
Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
Null PS50293 | View Gene Set | 3.55e-07 | 134 | 0.0002609 | 1 | TPR_REGION | expasy.org/pros... |
Null PS50005 | View Gene Set | 8.881e-07 | 114 | 0.0003264 | 2 | TPR | expasy.org/pros... |
Null PS50127 | View Gene Set | 1.658e-06 | 41 | 0.0004061 | 3 | UBIQUITIN_CONJUGAT_2 | expasy.org/pros... |
Null PS00183 | View Gene Set | 3.001e-06 | 25 | 0.0005514 | 4 | UBIQUITIN_CONJUGAT_1 | expasy.org/pros... |
Null PS50862 | View Gene Set | 2.807e-05 | 18 | 0.004126 | 5 | AA_TRNA_LIGASE_II | expasy.org/pros... |
Null PS01132 | View Gene Set | 0.0001945 | 21 | 0.02382 | 6 | ACTINS_ACT_LIKE | expasy.org/pros... |
Null PS50069 | View Gene Set | 0.0002839 | 10 | 0.02981 | 7 | CULLIN_2 | expasy.org/pros... |
Null PS50330 | View Gene Set | 0.0003875 | 22 | 0.0356 | 8 | UIM | expasy.org/pros... |
Null PS50866 | View Gene Set | 0.0005358 | 19 | 0.04375 | 9 | GOLD | expasy.org/pros... |
Null PS50961 | View Gene Set | 0.0006126 | 8 | 0.04502 | 10 | HTH_LA | expasy.org/pros... |
Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
Null EC:6.3.2.19 | View Gene Set | 7.937e-06 | 79 | 0.001254 | 1 | Ubiquitin--protein ligase | expasy.org/enzy... |
Null EC:1.6.5.3 | View Gene Set | 9.847e-05 | 43 | 0.005186 | 2 | NADH dehydrogenase (ubiquinone) | expasy.org/enzy... |
Null EC:1.6.99.3 | View Gene Set | 9.847e-05 | 35 | 0.005186 | 2 | NADH dehydrogenase | expasy.org/enzy... |
Null EC:3.1.3.16 | View Gene Set | 0.0003339 | 24 | 0.01319 | 4 | Phosphoprotein phosphatase | expasy.org/enzy... |
Null EC:1.10.2.2 | View Gene Set | 0.001547 | 13 | 0.04889 | 5 | Ubiquinol--cytochrome-c reductase | expasy.org/enzy... |
Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
Null ppi.PEX19 | View Gene Set | 0.0001244 | 7 | 0.0235 | 1 | Protein-protein-interaction for PEX19 | www.ncbi.nlm.ni... |
Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
Null ppi.G3BP1 | View Gene Set | 1.516e-05 | 18 | 0.00381 | 1 | Protein-protein-interaction for G3BP1 | www.ncbi.nlm.ni... |
Null ppi.BIRC8 | View Gene Set | 8.977e-06 | 12 | 0.00381 | 1 | Protein-protein-interaction for BIRC8 | www.ncbi.nlm.ni... |
Null ppi.ZNRF4 | View Gene Set | 1.13e-05 | 10 | 0.00381 | 1 | Protein-protein-interaction for ZNRF4 | www.ncbi.nlm.ni... |
Null ppi.RNF167 | View Gene Set | 1.063e-05 | 8 | 0.00381 | 1 | Protein-protein-interaction for RNF167 | www.ncbi.nlm.ni... |
Null ppi.RNF114 | View Gene Set | 1.825e-05 | 13 | 0.00381 | 1 | Protein-protein-interaction for RNF114 | www.ncbi.nlm.ni... |
Null ppi.TRIM39 | View Gene Set | 3.903e-06 | 15 | 0.00381 | 1 | Protein-protein-interaction for TRIM39 | www.ncbi.nlm.ni... |
Null ppi.DDA1 | View Gene Set | 8.487e-06 | 44 | 0.00381 | 1 | Protein-protein-interaction for DDA1 | www.ncbi.nlm.ni... |
Null ppi.ZNRF1 | View Gene Set | 1.824e-05 | 12 | 0.00381 | 1 | Protein-protein-interaction for ZNRF1 | www.ncbi.nlm.ni... |
Null ppi.CADPS2 | View Gene Set | 1.324e-05 | 9 | 0.00381 | 1 | Protein-protein-interaction for CADPS2 | www.ncbi.nlm.ni... |
Null ppi.DZIP3 | View Gene Set | 1.791e-05 | 18 | 0.00381 | 1 | Protein-protein-interaction for DZIP3 | www.ncbi.nlm.ni... |
Null ppi.PSMD6 | View Gene Set | 6.406e-06 | 21 | 0.00381 | 1 | Protein-protein-interaction for PSMD6 | www.ncbi.nlm.ni... |
Null ppi.DTX3 | View Gene Set | 4.239e-05 | 15 | 0.00691 | 12 | Protein-protein-interaction for DTX3 | www.ncbi.nlm.ni... |
Null ppi.RNF165 | View Gene Set | 4.137e-05 | 9 | 0.00691 | 12 | Protein-protein-interaction for RNF165 | www.ncbi.nlm.ni... |
Null ppi.UCHL5 | View Gene Set | 4.512e-05 | 33 | 0.00691 | 12 | Protein-protein-interaction for UCHL5 | www.ncbi.nlm.ni... |
Null ppi.THAP1 | View Gene Set | 4.235e-05 | 11 | 0.00691 | 12 | Protein-protein-interaction for THAP1 | www.ncbi.nlm.ni... |
Null ppi.UBOX5 | View Gene Set | 5.939e-05 | 11 | 0.008526 | 16 | Protein-protein-interaction for UBOX5 | www.ncbi.nlm.ni... |
Null ppi.PSMD13 | View Gene Set | 6.802e-05 | 20 | 0.00919 | 17 | Protein-protein-interaction for PSMD13 | www.ncbi.nlm.ni... |
Null ppi.RNF166 | View Gene Set | 7.516e-05 | 11 | 0.009592 | 18 | Protein-protein-interaction for RNF166 | www.ncbi.nlm.ni... |
Null ppi.DTX3L | View Gene Set | 9.782e-05 | 16 | 0.009769 | 19 | Protein-protein-interaction for DTX3L | www.ncbi.nlm.ni... |
Null ppi.GIGYF2 | View Gene Set | 9.254e-05 | 17 | 0.009769 | 19 | Protein-protein-interaction for GIGYF2 | www.ncbi.nlm.ni... |
Null ppi.COPS4 | View Gene Set | 8.651e-05 | 12 | 0.009769 | 19 | Protein-protein-interaction for COPS4 | www.ncbi.nlm.ni... |
Null ppi.RNF181 | View Gene Set | 9.458e-05 | 7 | 0.009769 | 19 | Protein-protein-interaction for RNF181 | www.ncbi.nlm.ni... |
Null ppi.RNF14 | View Gene Set | 9.47e-05 | 9 | 0.009769 | 19 | Protein-protein-interaction for RNF14 | www.ncbi.nlm.ni... |
Null ppi.PEX19 | View Gene Set | 0.0001244 | 7 | 0.01143 | 24 | Protein-protein-interaction for PEX19 | www.ncbi.nlm.ni... |
Null ppi.TLN1 | View Gene Set | 0.0001205 | 11 | 0.01143 | 24 | Protein-protein-interaction for TLN1 | www.ncbi.nlm.ni... |
Null ppi.LYAR | View Gene Set | 0.0001368 | 26 | 0.01209 | 26 | Protein-protein-interaction for LYAR | www.ncbi.nlm.ni... |
Null ppi.TRIM5 | View Gene Set | 0.0001835 | 14 | 0.01561 | 27 | Protein-protein-interaction for TRIM5 | www.ncbi.nlm.ni... |
Null ppi.RNF185 | View Gene Set | 0.0002066 | 13 | 0.01694 | 28 | Protein-protein-interaction for RNF185 | www.ncbi.nlm.ni... |
Null ppi.RNF130 | View Gene Set | 0.0002574 | 9 | 0.02039 | 29 | Protein-protein-interaction for RNF130 | www.ncbi.nlm.ni... |
Null ppi.RMND5B | View Gene Set | 0.0003076 | 8 | 0.02356 | 30 | Protein-protein-interaction for RMND5B | www.ncbi.nlm.ni... |
Null ppi.USP49 | View Gene Set | 0.0003186 | 24 | 0.0236 | 31 | Protein-protein-interaction for USP49 | www.ncbi.nlm.ni... |
Null ppi.TRIM2 | View Gene Set | 0.000339 | 9 | 0.02433 | 32 | Protein-protein-interaction for TRIM2 | www.ncbi.nlm.ni... |
Null ppi.PSMD14 | View Gene Set | 0.0003613 | 16 | 0.02441 | 33 | Protein-protein-interaction for PSMD14 | www.ncbi.nlm.ni... |
Null ppi.USP14 | View Gene Set | 0.0003548 | 22 | 0.02441 | 33 | Protein-protein-interaction for USP14 | www.ncbi.nlm.ni... |
Null ppi.TRIM43 | View Gene Set | 0.0003784 | 7 | 0.02484 | 35 | Protein-protein-interaction for TRIM43 | www.ncbi.nlm.ni... |
Null ppi.MEPCE | View Gene Set | 0.0004144 | 147 | 0.02573 | 36 | Protein-protein-interaction for MEPCE | www.ncbi.nlm.ni... |
Null ppi.RPS6KA5 | View Gene Set | 0.0004069 | 7 | 0.02573 | 36 | Protein-protein-interaction for RPS6KA5 | www.ncbi.nlm.ni... |
Null ppi.PAAF1 | View Gene Set | 0.0004375 | 20 | 0.02645 | 38 | Protein-protein-interaction for PAAF1 | www.ncbi.nlm.ni... |
Null ppi.LRSAM1 | View Gene Set | 0.000456 | 18 | 0.02686 | 39 | Protein-protein-interaction for LRSAM1 | www.ncbi.nlm.ni... |
Null ppi.SRRM2 | View Gene Set | 0.0004757 | 101 | 0.02732 | 40 | Protein-protein-interaction for SRRM2 | www.ncbi.nlm.ni... |
Null ppi.ANAPC4 | View Gene Set | 0.0005139 | 8 | 0.02879 | 41 | Protein-protein-interaction for ANAPC4 | www.ncbi.nlm.ni... |
Null ppi.APC2 | View Gene Set | 0.0005478 | 8 | 0.02927 | 42 | Protein-protein-interaction for APC2 | www.ncbi.nlm.ni... |
Null ppi.MKRN3 | View Gene Set | 0.000548 | 14 | 0.02927 | 42 | Protein-protein-interaction for MKRN3 | www.ncbi.nlm.ni... |
Null ppi.TNKS | View Gene Set | 0.0005789 | 6 | 0.03022 | 44 | Protein-protein-interaction for TNKS | www.ncbi.nlm.ni... |
Null ppi.RPAP2 | View Gene Set | 0.0006166 | 43 | 0.03148 | 45 | Protein-protein-interaction for RPAP2 | www.ncbi.nlm.ni... |
Null ppi.PEX5 | View Gene Set | 0.0006825 | 9 | 0.03408 | 46 | Protein-protein-interaction for PEX5 | www.ncbi.nlm.ni... |
Null ppi.SUN2 | View Gene Set | 0.0008548 | 6 | 0.04177 | 47 | Protein-protein-interaction for SUN2 | www.ncbi.nlm.ni... |
Null ppi.TRIM35 | View Gene Set | 0.0009257 | 6 | 0.04179 | 48 | Protein-protein-interaction for TRIM35 | www.ncbi.nlm.ni... |
Null ppi.RPAP1 | View Gene Set | 0.0009544 | 24 | 0.04179 | 48 | Protein-protein-interaction for RPAP1 | www.ncbi.nlm.ni... |
Null ppi.FBXW2 | View Gene Set | 0.0008991 | 7 | 0.04179 | 48 | Protein-protein-interaction for FBXW2 | www.ncbi.nlm.ni... |
Null ppi.RAB6A | View Gene Set | 0.0009034 | 8 | 0.04179 | 48 | Protein-protein-interaction for RAB6A | www.ncbi.nlm.ni... |
Null ppi.DCAF11 | View Gene Set | 0.0009393 | 8 | 0.04179 | 48 | Protein-protein-interaction for DCAF11 | www.ncbi.nlm.ni... |
Null ppi.RNF7 | View Gene Set | 0.0009642 | 9 | 0.04179 | 48 | Protein-protein-interaction for RNF7 | www.ncbi.nlm.ni... |
Null ppi.UBA5 | View Gene Set | 0.0009886 | 35 | 0.04205 | 54 | Protein-protein-interaction for UBA5 | www.ncbi.nlm.ni... |
Null ppi.RPAP3 | View Gene Set | 0.00106 | 29 | 0.04427 | 55 | Protein-protein-interaction for RPAP3 | www.ncbi.nlm.ni... |
Null ppi.RNF126 | View Gene Set | 0.001203 | 7 | 0.04936 | 56 | Protein-protein-interaction for RNF126 | www.ncbi.nlm.ni... |
Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
Null ppi.BIRC8 | View Gene Set | 8.977e-06 | 12 | 0.005802 | 1 | Protein-protein-interaction for BIRC8 | www.ncbi.nlm.ni... |
Null ppi.ZNRF4 | View Gene Set | 1.13e-05 | 10 | 0.005802 | 1 | Protein-protein-interaction for ZNRF4 | www.ncbi.nlm.ni... |
Null ppi.UBOX5 | View Gene Set | 4.59e-06 | 13 | 0.005802 | 1 | Protein-protein-interaction for UBOX5 | www.ncbi.nlm.ni... |
Null ppi.RNF167 | View Gene Set | 1.063e-05 | 8 | 0.005802 | 1 | Protein-protein-interaction for RNF167 | www.ncbi.nlm.ni... |
Null ppi.TRIM39 | View Gene Set | 5.276e-06 | 16 | 0.005802 | 1 | Protein-protein-interaction for TRIM39 | www.ncbi.nlm.ni... |
Null ppi.DDA1 | View Gene Set | 8.487e-06 | 44 | 0.005802 | 1 | Protein-protein-interaction for DDA1 | www.ncbi.nlm.ni... |
Null ppi.DZIP3 | View Gene Set | 9.526e-06 | 20 | 0.005802 | 1 | Protein-protein-interaction for DZIP3 | www.ncbi.nlm.ni... |
Null ppi.THAP1 | View Gene Set | 1.942e-05 | 12 | 0.006347 | 8 | Protein-protein-interaction for THAP1 | www.ncbi.nlm.ni... |
Null ppi.RNF114 | View Gene Set | 1.825e-05 | 13 | 0.006347 | 8 | Protein-protein-interaction for RNF114 | www.ncbi.nlm.ni... |
Null ppi.ZNRF1 | View Gene Set | 1.824e-05 | 12 | 0.006347 | 8 | Protein-protein-interaction for ZNRF1 | www.ncbi.nlm.ni... |
Null ppi.PSMD6 | View Gene Set | 1.578e-05 | 23 | 0.006347 | 8 | Protein-protein-interaction for PSMD6 | www.ncbi.nlm.ni... |
Null ppi.NDRG1 | View Gene Set | 2.509e-05 | 58 | 0.007514 | 12 | Protein-protein-interaction for NDRG1 | www.ncbi.nlm.ni... |
Null ppi.GIGYF2 | View Gene Set | 3.645e-05 | 19 | 0.009383 | 13 | Protein-protein-interaction for GIGYF2 | www.ncbi.nlm.ni... |
Null ppi.RNF165 | View Gene Set | 4.137e-05 | 9 | 0.009383 | 13 | Protein-protein-interaction for RNF165 | www.ncbi.nlm.ni... |
Null ppi.COPS4 | View Gene Set | 4.177e-05 | 17 | 0.009383 | 13 | Protein-protein-interaction for COPS4 | www.ncbi.nlm.ni... |
Null ppi.UCHL5 | View Gene Set | 3.902e-05 | 34 | 0.009383 | 13 | Protein-protein-interaction for UCHL5 | www.ncbi.nlm.ni... |
Null ppi.PSMD13 | View Gene Set | 6.802e-05 | 20 | 0.01398 | 17 | Protein-protein-interaction for PSMD13 | www.ncbi.nlm.ni... |
Null ppi.PDHX | View Gene Set | 7.002e-05 | 7 | 0.01398 | 17 | Protein-protein-interaction for PDHX | www.ncbi.nlm.ni... |
Null ppi.RNF166 | View Gene Set | 7.516e-05 | 11 | 0.01422 | 19 | Protein-protein-interaction for RNF166 | www.ncbi.nlm.ni... |
Null ppi.DTX3L | View Gene Set | 9.782e-05 | 16 | 0.01585 | 20 | Protein-protein-interaction for DTX3L | www.ncbi.nlm.ni... |
Null ppi.DTX3 | View Gene Set | 0.0001015 | 17 | 0.01585 | 20 | Protein-protein-interaction for DTX3 | www.ncbi.nlm.ni... |
Null ppi.UBQLN2 | View Gene Set | 0.000101 | 11 | 0.01585 | 20 | Protein-protein-interaction for UBQLN2 | www.ncbi.nlm.ni... |
Null ppi.RNF181 | View Gene Set | 9.458e-05 | 7 | 0.01585 | 20 | Protein-protein-interaction for RNF181 | www.ncbi.nlm.ni... |
Null ppi.G3BP1 | View Gene Set | 0.0001127 | 19 | 0.01621 | 24 | Protein-protein-interaction for G3BP1 | www.ncbi.nlm.ni... |
Null ppi.PKD1 | View Gene Set | 0.0001127 | 13 | 0.01621 | 24 | Protein-protein-interaction for PKD1 | www.ncbi.nlm.ni... |
Null ppi.TRIM2 | View Gene Set | 0.0001267 | 10 | 0.0168 | 26 | Protein-protein-interaction for TRIM2 | www.ncbi.nlm.ni... |
Null ppi.PPID | View Gene Set | 0.0001332 | 10 | 0.0168 | 26 | Protein-protein-interaction for PPID | www.ncbi.nlm.ni... |
Null ppi.LYAR | View Gene Set | 0.0001368 | 26 | 0.0168 | 26 | Protein-protein-interaction for LYAR | www.ncbi.nlm.ni... |
Null ppi.TRIM5 | View Gene Set | 0.0001334 | 16 | 0.0168 | 26 | Protein-protein-interaction for TRIM5 | www.ncbi.nlm.ni... |
Null ppi.CADPS2 | View Gene Set | 0.0001402 | 13 | 0.0168 | 26 | Protein-protein-interaction for CADPS2 | www.ncbi.nlm.ni... |
Null ppi.RNF185 | View Gene Set | 0.0002066 | 13 | 0.02395 | 31 | Protein-protein-interaction for RNF185 | www.ncbi.nlm.ni... |
Null ppi.ASCC2 | View Gene Set | 0.0002798 | 39 | 0.03143 | 32 | Protein-protein-interaction for ASCC2 | www.ncbi.nlm.ni... |
Null ppi.PSMD14 | View Gene Set | 0.0003613 | 16 | 0.0371 | 33 | Protein-protein-interaction for PSMD14 | www.ncbi.nlm.ni... |
Null ppi.RNF126 | View Gene Set | 0.0003486 | 8 | 0.0371 | 33 | Protein-protein-interaction for RNF126 | www.ncbi.nlm.ni... |
Null ppi.USP14 | View Gene Set | 0.0003548 | 22 | 0.0371 | 33 | Protein-protein-interaction for USP14 | www.ncbi.nlm.ni... |
Null ppi.TRIM43 | View Gene Set | 0.0003784 | 7 | 0.03778 | 36 | Protein-protein-interaction for TRIM43 | www.ncbi.nlm.ni... |
Null ppi.USP49 | View Gene Set | 0.0004013 | 25 | 0.03898 | 37 | Protein-protein-interaction for USP49 | www.ncbi.nlm.ni... |
Null ppi.MEPCE | View Gene Set | 0.0004144 | 147 | 0.0392 | 38 | Protein-protein-interaction for MEPCE | www.ncbi.nlm.ni... |
Null ppi.POLR2G | View Gene Set | 0.0004423 | 9 | 0.03974 | 39 | Protein-protein-interaction for POLR2G | www.ncbi.nlm.ni... |
Null ppi.PAAF1 | View Gene Set | 0.0004375 | 20 | 0.03974 | 39 | Protein-protein-interaction for PAAF1 | www.ncbi.nlm.ni... |
Null ppi.SRRM2 | View Gene Set | 0.0004757 | 101 | 0.0409 | 41 | Protein-protein-interaction for SRRM2 | www.ncbi.nlm.ni... |
Null ppi.GORASP2 | View Gene Set | 0.000478 | 19 | 0.0409 | 41 | Protein-protein-interaction for GORASP2 | www.ncbi.nlm.ni... |
Null ppi.ANAPC4 | View Gene Set | 0.0005139 | 8 | 0.04295 | 43 | Protein-protein-interaction for ANAPC4 | www.ncbi.nlm.ni... |
Null ppi.APC2 | View Gene Set | 0.0005478 | 8 | 0.04377 | 44 | Protein-protein-interaction for APC2 | www.ncbi.nlm.ni... |
Null ppi.MKRN3 | View Gene Set | 0.000548 | 14 | 0.04377 | 44 | Protein-protein-interaction for MKRN3 | www.ncbi.nlm.ni... |
Null ppi.TNKS | View Gene Set | 0.0005789 | 6 | 0.04523 | 46 | Protein-protein-interaction for TNKS | www.ncbi.nlm.ni... |
Null ppi.RPAP2 | View Gene Set | 0.0006166 | 43 | 0.04715 | 47 | Protein-protein-interaction for RPAP2 | www.ncbi.nlm.ni... |
Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
Null AndrogenReceptor | View Gene Set | 7.287e-05 | 78 | 0.0007287 | 1 | CELL_MAP - AndrogenReceptor gene set | www.pathwaycomm... |
Null TNF alpha/NF-kB | View Gene Set | 0.0003396 | 170 | 0.001698 | 2 | CELL_MAP - TNF alpha/NF-kB gene set | www.pathwaycomm... |
Null EGFR1 | View Gene Set | 0.009516 | 137 | 0.03172 | 3 | CELL_MAP - EGFR1 gene set | www.pathwaycomm... |
Null KitReceptor | View Gene Set | 0.01672 | 54 | 0.03364 | 4 | CELL_MAP - KitReceptor gene set | www.pathwaycomm... |
Null TGFBR | View Gene Set | 0.01682 | 124 | 0.03364 | 4 | CELL_MAP - TGFBR gene set | www.pathwaycomm... |
Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
Null LKB1 signaling events | View Gene Set | 2.723e-06 | 372 | 0.0005065 | 1 | NCI_NATURE - LKB1 signaling events gene set | www.pathwaycomm... |
Null mTOR signaling pathway | View Gene Set | 2.761e-05 | 343 | 0.001712 | 2 | NCI_NATURE - mTOR signaling pathway gene set | www.pathwaycomm... |
Null EGFR-dependent Endothelin signaling events | View Gene Set | 2.559e-05 | 345 | 0.001712 | 2 | NCI_NATURE - EGFR-dependent Endothelin signaling events gene set | www.pathwaycomm... |
Null IGF1 pathway | View Gene Set | 0.0003004 | 271 | 0.01397 | 4 | NCI_NATURE - IGF1 pathway gene set | www.pathwaycomm... |
Null Plasma membrane estrogen receptor signaling | View Gene Set | 0.000828 | 297 | 0.0154 | 5 | NCI_NATURE - Plasma membrane estrogen receptor signaling gene set | www.pathwaycomm... |
Null Insulin Pathway | View Gene Set | 0.0007138 | 263 | 0.0154 | 5 | NCI_NATURE - Insulin Pathway gene set | www.pathwaycomm... |
Null Arf6 signaling events | View Gene Set | 0.0007138 | 263 | 0.0154 | 5 | NCI_NATURE - Arf6 signaling events gene set | www.pathwaycomm... |
Null ErbB2/ErbB3 signaling events | View Gene Set | 0.000715 | 38 | 0.0154 | 5 | NCI_NATURE - ErbB2/ErbB3 signaling events gene set | www.pathwaycomm... |
Null Arf6 trafficking events | View Gene Set | 0.0007138 | 263 | 0.0154 | 5 | NCI_NATURE - Arf6 trafficking events gene set | www.pathwaycomm... |
Null Arf1 pathway | View Gene Set | 0.0007608 | 20 | 0.0154 | 5 | NCI_NATURE - Arf1 pathway gene set | www.pathwaycomm... |
Null Signaling events mediated by HDAC Class I | View Gene Set | 0.001101 | 114 | 0.01862 | 11 | NCI_NATURE - Signaling events mediated by HDAC Class I gene set | www.pathwaycomm... |
Null Endothelins | View Gene Set | 0.001828 | 439 | 0.02834 | 12 | NCI_NATURE - Endothelins gene set | www.pathwaycomm... |
Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
Null Metabolism of proteins | View Gene Set | 2.267e-14 | 263 | 2.532e-11 | 1 | REACTOME - Metabolism of proteins gene set | www.pathwaycomm... |
Null Gene Expression | View Gene Set | 1.72e-09 | 381 | 9.608e-07 | 2 | REACTOME - Gene Expression gene set | www.pathwaycomm... |
Null APC/C:Cdc20 mediated degradation of Securin | View Gene Set | 1.777e-08 | 72 | 5.81e-06 | 3 | REACTOME - APC/C:Cdc20 mediated degradation of Securin gene set | www.pathwaycomm... |
Null Respiratory electron transport ATP synthesis by chemiosmotic coupling and heat production by uncoupling proteins. | View Gene Set | 2.081e-08 | 91 | 5.81e-06 | 3 | REACTOME - Respiratory electron transport ATP synthesis by chemiosmotic coupling and heat production by uncoupling proteins. gene set | www.pathwaycomm... ATP synthesis b... and heat produc... |
Null tRNA Aminoacylation | View Gene Set | 3.932e-08 | 42 | 8.559e-06 | 5 | REACTOME - tRNA Aminoacylation gene set | www.pathwaycomm... |
Null Asparagine N-linked glycosylation | View Gene Set | 5.364e-08 | 77 | 8.559e-06 | 5 | REACTOME - Asparagine N-linked glycosylation gene set | www.pathwaycomm... |
Null APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1 | View Gene Set | 4.958e-08 | 77 | 8.559e-06 | 5 | REACTOME - APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1 gene set | www.pathwaycomm... |
Null Cytosolic tRNA aminoacylation | View Gene Set | 8.162e-08 | 24 | 1.013e-05 | 8 | REACTOME - Cytosolic tRNA aminoacylation gene set | www.pathwaycomm... |
Null Autodegradation of Cdh1 by Cdh1:APC/C | View Gene Set | 7.714e-08 | 67 | 1.013e-05 | 8 | REACTOME - Autodegradation of Cdh1 by Cdh1:APC/C gene set | www.pathwaycomm... |
Null Respiratory electron transport | View Gene Set | 1.148e-07 | 76 | 1.283e-05 | 10 | REACTOME - Respiratory electron transport gene set | www.pathwaycomm... |
Null Regulation of ornithine decarboxylase (ODC) | View Gene Set | 1.732e-07 | 62 | 1.759e-05 | 11 | REACTOME - Regulation of ornithine decarboxylase (ODC) gene set | www.pathwaycomm... |
Null Regulation of activated PAK-2p34 by proteasome mediated degradation | View Gene Set | 3.042e-07 | 57 | 2.831e-05 | 12 | REACTOME - Regulation of activated PAK-2p34 by proteasome mediated degradation gene set | www.pathwaycomm... |
Null Vif-mediated degradation of APOBEC3G | View Gene Set | 4.574e-07 | 61 | 3.718e-05 | 13 | REACTOME - Vif-mediated degradation of APOBEC3G gene set | www.pathwaycomm... |
Null Cdc20:Phospho-APC/C mediated degradation of Cyclin A | View Gene Set | 4.66e-07 | 75 | 3.718e-05 | 13 | REACTOME - Cdc20:Phospho-APC/C mediated degradation of Cyclin A gene set | www.pathwaycomm... |
Null Post-translational protein modification | View Gene Set | 5.78e-07 | 114 | 4.304e-05 | 15 | REACTOME - Post-translational protein modification gene set | www.pathwaycomm... |
Null Degradation of beta-catenin by the destruction complex | View Gene Set | 6.884e-07 | 56 | 4.523e-05 | 16 | REACTOME - Degradation of beta-catenin by the destruction complex gene set | www.pathwaycomm... |
Null Signaling by Wnt | View Gene Set | 6.884e-07 | 56 | 4.523e-05 | 16 | REACTOME - Signaling by Wnt gene set | www.pathwaycomm... |
Null HIV Infection | View Gene Set | 7.441e-07 | 194 | 4.561e-05 | 18 | REACTOME - HIV Infection gene set | www.pathwaycomm... |
Null APC/C:Cdc20 mediated degradation of mitotic proteins | View Gene Set | 7.758e-07 | 77 | 4.561e-05 | 18 | REACTOME - APC/C:Cdc20 mediated degradation of mitotic proteins gene set | www.pathwaycomm... |
Null Regulation of Apoptosis | View Gene Set | 1.012e-06 | 66 | 5.322e-05 | 20 | REACTOME - Regulation of Apoptosis gene set | www.pathwaycomm... |
Null Vpu mediated degradation of CD4 | View Gene Set | 1.048e-06 | 57 | 5.322e-05 | 20 | REACTOME - Vpu mediated degradation of CD4 gene set | www.pathwaycomm... |
Null Translation | View Gene Set | 1.01e-06 | 120 | 5.322e-05 | 20 | REACTOME - Translation gene set | www.pathwaycomm... |
Null SCF-beta-TrCP mediated degradation of Emi1 | View Gene Set | 1.261e-06 | 60 | 5.869e-05 | 23 | REACTOME - SCF-beta-TrCP mediated degradation of Emi1 gene set | www.pathwaycomm... |
Null Destabilization of mRNA by AUF1 (hnRNP D0) | View Gene Set | 1.239e-06 | 63 | 5.869e-05 | 23 | REACTOME - Destabilization of mRNA by AUF1 (hnRNP D0) gene set | www.pathwaycomm... |
Null Insulin Synthesis and Processing | View Gene Set | 1.353e-06 | 132 | 6.043e-05 | 25 | REACTOME - Insulin Synthesis and Processing gene set | www.pathwaycomm... |
Null Regulation of mRNA Stability by Proteins that Bind AU-rich Elements | View Gene Set | 1.492e-06 | 95 | 6.408e-05 | 26 | REACTOME - Regulation of mRNA Stability by Proteins that Bind AU-rich Elements gene set | www.pathwaycomm... |
Null Activation of APC/C and APC/C:Cdc20 mediated degradation of mitotic proteins | View Gene Set | 1.855e-06 | 86 | 7.676e-05 | 27 | REACTOME - Activation of APC/C and APC/C:Cdc20 mediated degradation of mitotic proteins gene set | www.pathwaycomm... |
Null Ubiquitin-dependent degradation of Cyclin D1 | View Gene Set | 2.921e-06 | 59 | 0.0001125 | 28 | REACTOME - Ubiquitin-dependent degradation of Cyclin D1 gene set | www.pathwaycomm... |
Null Ubiquitin-dependent degradation of Cyclin D | View Gene Set | 2.921e-06 | 59 | 0.0001125 | 28 | REACTOME - Ubiquitin-dependent degradation of Cyclin D gene set | www.pathwaycomm... |
Null CDK-mediated phosphorylation and removal of Cdc6 | View Gene Set | 3.058e-06 | 58 | 0.0001139 | 30 | REACTOME - CDK-mediated phosphorylation and removal of Cdc6 gene set | www.pathwaycomm... |
Null Membrane Trafficking | View Gene Set | 3.515e-06 | 84 | 0.0001197 | 31 | REACTOME - Membrane Trafficking gene set | www.pathwaycomm... |
Null Cap-dependent Translation Initiation | View Gene Set | 3.536e-06 | 113 | 0.0001197 | 31 | REACTOME - Cap-dependent Translation Initiation gene set | www.pathwaycomm... |
Null Eukaryotic Translation Initiation | View Gene Set | 3.536e-06 | 113 | 0.0001197 | 31 | REACTOME - Eukaryotic Translation Initiation gene set | www.pathwaycomm... |
Null Autodegradation of the E3 ubiquitin ligase COP1 | View Gene Set | 4.07e-06 | 60 | 0.0001337 | 34 | REACTOME - Autodegradation of the E3 ubiquitin ligase COP1 gene set | www.pathwaycomm... |
Null Ubiquitin Mediated Degradation of Phosphorylated Cdc25A | View Gene Set | 4.705e-06 | 61 | 0.0001476 | 35 | REACTOME - Ubiquitin Mediated Degradation of Phosphorylated Cdc25A gene set | www.pathwaycomm... |
Null Regulation of APC/C activators between G1/S and early anaphase | View Gene Set | 4.756e-06 | 88 | 0.0001476 | 35 | REACTOME - Regulation of APC/C activators between G1/S and early anaphase gene set | www.pathwaycomm... |
Null ER to Golgi Transport | View Gene Set | 7.183e-06 | 9 | 0.0002111 | 37 | REACTOME - ER to Golgi Transport gene set | www.pathwaycomm... |
Null COPII (Coat Protein 2) Mediated Vesicle Transport | View Gene Set | 7.183e-06 | 9 | 0.0002111 | 37 | REACTOME - COPII (Coat Protein 2) Mediated Vesicle Transport gene set | www.pathwaycomm... |
Null Ribosomal scanning and start codon recognition | View Gene Set | 9.901e-06 | 56 | 0.0002836 | 39 | REACTOME - Ribosomal scanning and start codon recognition gene set | www.pathwaycomm... |
Null Metabolism of RNA | View Gene Set | 1.071e-05 | 174 | 0.0002983 | 40 | REACTOME - Metabolism of RNA gene set | www.pathwaycomm... |
Null Metabolism of mRNA | View Gene Set | 1.095e-05 | 125 | 0.0002983 | 40 | REACTOME - Metabolism of mRNA gene set | www.pathwaycomm... |
Null Stabilization of p53 | View Gene Set | 1.139e-05 | 61 | 0.0003029 | 42 | REACTOME - Stabilization of p53 gene set | www.pathwaycomm... |
Null CDT1 association with the CDC6:ORC:origin complex | View Gene Set | 1.197e-05 | 66 | 0.0003111 | 43 | REACTOME - CDT1 association with the CDC6:ORC:origin complex gene set | www.pathwaycomm... |
Null p53-Independent G1/S DNA damage checkpoint | View Gene Set | 1.471e-05 | 62 | 0.0003651 | 44 | REACTOME - p53-Independent G1/S DNA damage checkpoint gene set | www.pathwaycomm... |
Null p53-Independent DNA Damage Response | View Gene Set | 1.471e-05 | 62 | 0.0003651 | 44 | REACTOME - p53-Independent DNA Damage Response gene set | www.pathwaycomm... |
Null Formation of the ternary complex and subsequently the 43S complex | View Gene Set | 1.51e-05 | 49 | 0.0003668 | 46 | REACTOME - Formation of the ternary complex and subsequently the 43S complex gene set | www.pathwaycomm... and subsequentl... the 43S complex... |
Null GTP hydrolysis and joining of the 60S ribosomal subunit | View Gene Set | 1.657e-05 | 106 | 0.0003937 | 47 | REACTOME - GTP hydrolysis and joining of the 60S ribosomal subunit gene set | www.pathwaycomm... |
Null Activation of the mRNA upon binding of the cap-binding complex and eIFs and subsequent binding to 43S | View Gene Set | 1.724e-05 | 57 | 0.0004012 | 48 | REACTOME - Activation of the mRNA upon binding of the cap-binding complex and eIFs and subsequent binding to 43S gene set | www.pathwaycomm... and subsequent ... |
Null SCF(Skp2)-mediated degradation of p27/p21 | View Gene Set | 2.192e-05 | 52 | 0.0004997 | 49 | REACTOME - SCF(Skp2)-mediated degradation of p27/p21 gene set | www.pathwaycomm... |
Null Translation initiation complex formation | View Gene Set | 2.756e-05 | 56 | 0.0006157 | 50 | REACTOME - Translation initiation complex formation gene set | www.pathwaycomm... |
Null Formation of HIV-1 elongation complex in the absence of HIV-1 Tat | View Gene Set | 2.986e-05 | 42 | 0.0006294 | 51 | REACTOME - Formation of HIV-1 elongation complex in the absence of HIV-1 Tat gene set | www.pathwaycomm... |
Null Formation of RNA Pol II elongation complex | View Gene Set | 2.986e-05 | 42 | 0.0006294 | 51 | REACTOME - Formation of RNA Pol II elongation complex gene set | www.pathwaycomm... |
Null RNA Polymerase II Transcription Elongation | View Gene Set | 2.986e-05 | 42 | 0.0006294 | 51 | REACTOME - RNA Polymerase II Transcription Elongation gene set | www.pathwaycomm... |
Null Regulation of mitotic cell cycle | View Gene Set | 3.226e-05 | 95 | 0.0006551 | 54 | REACTOME - Regulation of mitotic cell cycle gene set | www.pathwaycomm... |
Null APC/C-mediated degradation of cell cycle proteins | View Gene Set | 3.226e-05 | 95 | 0.0006551 | 54 | REACTOME - APC/C-mediated degradation of cell cycle proteins gene set | www.pathwaycomm... |
Null Pyruvate metabolism and Citric Acid (TCA) cycle | View Gene Set | 3.729e-05 | 31 | 0.0007218 | 56 | REACTOME - Pyruvate metabolism and Citric Acid (TCA) cycle gene set | www.pathwaycomm... |
Null p53-Dependent G1/S DNA damage checkpoint | View Gene Set | 3.748e-05 | 64 | 0.0007218 | 56 | REACTOME - p53-Dependent G1/S DNA damage checkpoint gene set | www.pathwaycomm... |
Null p53-Dependent G1 DNA Damage Response | View Gene Set | 3.748e-05 | 64 | 0.0007218 | 56 | REACTOME - p53-Dependent G1 DNA Damage Response gene set | www.pathwaycomm... |
Null RNA Polymerase II Pre-transcription Events | View Gene Set | 3.969e-05 | 58 | 0.0007514 | 59 | REACTOME - RNA Polymerase II Pre-transcription Events gene set | www.pathwaycomm... |
Null Host Interactions of HIV factors | View Gene Set | 4.062e-05 | 132 | 0.0007562 | 60 | REACTOME - Host Interactions of HIV factors gene set | www.pathwaycomm... |
Null Cooperation of Prefoldin and TriC/CCT in actin and tubulin folding | View Gene Set | 4.18e-05 | 15 | 0.0007655 | 61 | REACTOME - Cooperation of Prefoldin and TriC/CCT in actin and tubulin folding gene set | www.pathwaycomm... |
Null Unfolded Protein Response | View Gene Set | 4.777e-05 | 63 | 0.000847 | 62 | REACTOME - Unfolded Protein Response gene set | www.pathwaycomm... |
Null Diabetes pathways | View Gene Set | 4.749e-05 | 320 | 0.000847 | 62 | REACTOME - Diabetes pathways gene set | www.pathwaycomm... |
Null Activation of Chaperones by IRE1alpha | View Gene Set | 5.026e-05 | 45 | 0.0008773 | 64 | REACTOME - Activation of Chaperones by IRE1alpha gene set | www.pathwaycomm... |
Null 3' -UTR-mediated translational regulation | View Gene Set | 5.193e-05 | 105 | 0.0008789 | 65 | REACTOME - 3' -UTR-mediated translational regulation gene set | www.pathwaycomm... |
Null L13a-mediated translational silencing of Ceruloplasmin expression | View Gene Set | 5.193e-05 | 105 | 0.0008789 | 65 | REACTOME - L13a-mediated translational silencing of Ceruloplasmin expression gene set | www.pathwaycomm... |
Null Formation of HIV-1 elongation complex containing HIV-1 Tat | View Gene Set | 6.545e-05 | 41 | 0.001044 | 67 | REACTOME - Formation of HIV-1 elongation complex containing HIV-1 Tat gene set | www.pathwaycomm... |
Null Tat-mediated elongation of the HIV-1 transcript | View Gene Set | 6.545e-05 | 41 | 0.001044 | 67 | REACTOME - Tat-mediated elongation of the HIV-1 transcript gene set | www.pathwaycomm... |
Null HIV-1 Transcription Elongation | View Gene Set | 6.545e-05 | 41 | 0.001044 | 67 | REACTOME - HIV-1 Transcription Elongation gene set | www.pathwaycomm... |
Null Apoptosis | View Gene Set | 6.523e-05 | 148 | 0.001044 | 67 | REACTOME - Apoptosis gene set | www.pathwaycomm... |
Null Prefoldin mediated transfer of substrate to CCT/TriC | View Gene Set | 8.879e-05 | 14 | 0.001397 | 71 | REACTOME - Prefoldin mediated transfer of substrate to CCT/TriC gene set | www.pathwaycomm... |
Null Metabolism of amino acids and derivatives | View Gene Set | 0.0001015 | 201 | 0.001575 | 72 | REACTOME - Metabolism of amino acids and derivatives gene set | www.pathwaycomm... |
Null Influenza Viral RNA Transcription and Replication | View Gene Set | 0.0001064 | 101 | 0.001628 | 73 | REACTOME - Influenza Viral RNA Transcription and Replication gene set | www.pathwaycomm... |
Null Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide LLO) and transfer to a nascent protein | View Gene Set | 0.0001201 | 30 | 0.001813 | 74 | REACTOME - Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide LLO) and transfer to a nascent protein gene set | www.pathwaycomm... LLO) and transf... |
Null mRNA Splicing - Minor Pathway | View Gene Set | 0.0001409 | 42 | 0.00203 | 75 | REACTOME - mRNA Splicing - Minor Pathway gene set | www.pathwaycomm... |
Null Pausing and recovery of elongation | View Gene Set | 0.0001436 | 30 | 0.00203 | 75 | REACTOME - Pausing and recovery of elongation gene set | www.pathwaycomm... |
Null Elongation arrest and recovery | View Gene Set | 0.0001436 | 30 | 0.00203 | 75 | REACTOME - Elongation arrest and recovery gene set | www.pathwaycomm... |
Null HIV-1 elongation arrest and recovery | View Gene Set | 0.0001436 | 30 | 0.00203 | 75 | REACTOME - HIV-1 elongation arrest and recovery gene set | www.pathwaycomm... |
Null Pausing and recovery of HIV-1 elongation | View Gene Set | 0.0001436 | 30 | 0.00203 | 75 | REACTOME - Pausing and recovery of HIV-1 elongation gene set | www.pathwaycomm... |
Null Chaperonin-mediated protein folding | View Gene Set | 0.0002103 | 16 | 0.002937 | 80 | REACTOME - Chaperonin-mediated protein folding gene set | www.pathwaycomm... |
Null G1/S DNA Damage Checkpoints | View Gene Set | 0.0002187 | 68 | 0.003016 | 81 | REACTOME - G1/S DNA Damage Checkpoints gene set | www.pathwaycomm... |
Null Transcription | View Gene Set | 0.0002287 | 178 | 0.003115 | 82 | REACTOME - Transcription gene set | www.pathwaycomm... |
Null Formation of a pool of free 40S subunits | View Gene Set | 0.0002408 | 95 | 0.003202 | 83 | REACTOME - Formation of a pool of free 40S subunits gene set | www.pathwaycomm... |
Null NGF signalling via TRKA from the plasma membrane | View Gene Set | 0.0002386 | 110 | 0.003202 | 83 | REACTOME - NGF signalling via TRKA from the plasma membrane gene set | www.pathwaycomm... |
Null Transcription of the HIV genome | View Gene Set | 0.0002682 | 60 | 0.003525 | 85 | REACTOME - Transcription of the HIV genome gene set | www.pathwaycomm... |
Null Formation of the HIV-1 Early Elongation Complex | View Gene Set | 0.0002913 | 32 | 0.003677 | 86 | REACTOME - Formation of the HIV-1 Early Elongation Complex gene set | www.pathwaycomm... |
Null Formation of the Early Elongation Complex | View Gene Set | 0.0002913 | 32 | 0.003677 | 86 | REACTOME - Formation of the Early Elongation Complex gene set | www.pathwaycomm... |
Null Cyclin A:Cdk2-associated events at S phase entry | View Gene Set | 0.0002903 | 62 | 0.003677 | 86 | REACTOME - Cyclin A:Cdk2-associated events at S phase entry gene set | www.pathwaycomm... |
Null Synthesis Secretion and Inactivation of Glucose-dependent Insulinotropic Polypeptide (GIP) | View Gene Set | 0.000293 | 107 | 0.003677 | 86 | REACTOME - Synthesis Secretion and Inactivation of Glucose-dependent Insulinotropic Polypeptide (GIP) gene set | www.pathwaycomm... Secretion... and Inactivatio... |
Null Pausing and recovery of Tat-mediated HIV-1 elongation | View Gene Set | 0.0003246 | 29 | 0.003985 | 90 | REACTOME - Pausing and recovery of Tat-mediated HIV-1 elongation gene set | www.pathwaycomm... |
Null Tat-mediated HIV-1 elongation arrest and recovery | View Gene Set | 0.0003246 | 29 | 0.003985 | 90 | REACTOME - Tat-mediated HIV-1 elongation arrest and recovery gene set | www.pathwaycomm... |
Null Synthesis of GDP-mannose | View Gene Set | 0.0003557 | 5 | 0.004318 | 92 | REACTOME - Synthesis of GDP-mannose gene set | www.pathwaycomm... |
Null Switching of origins to a post-replicative state | View Gene Set | 0.0003941 | 76 | 0.004683 | 93 | REACTOME - Switching of origins to a post-replicative state gene set | www.pathwaycomm... |
Null Orc1 removal from chromatin | View Gene Set | 0.0003941 | 76 | 0.004683 | 93 | REACTOME - Orc1 removal from chromatin gene set | www.pathwaycomm... |
Null Golgi to ER Retrograde Transport | View Gene Set | 0.0004096 | 10 | 0.004766 | 95 | REACTOME - Golgi to ER Retrograde Transport gene set | www.pathwaycomm... |
Null COPI Mediated Transport | View Gene Set | 0.0004096 | 10 | 0.004766 | 95 | REACTOME - COPI Mediated Transport gene set | www.pathwaycomm... |
Null Influenza Life Cycle | View Gene Set | 0.00053 | 138 | 0.006103 | 97 | REACTOME - Influenza Life Cycle gene set | www.pathwaycomm... |
Null Protein folding | View Gene Set | 0.0005365 | 29 | 0.006115 | 98 | REACTOME - Protein folding gene set | www.pathwaycomm... |
Null Folding of actin by CCT/TriC | View Gene Set | 0.0005678 | 9 | 0.006406 | 99 | REACTOME - Folding of actin by CCT/TriC gene set | www.pathwaycomm... |
Null Synthesis of substrates in N-glycan biosythesis | View Gene Set | 0.0005968 | 16 | 0.006666 | 100 | REACTOME - Synthesis of substrates in N-glycan biosythesis gene set | www.pathwaycomm... |
Null Abortive elongation of HIV-1 transcript in the absence of Tat | View Gene Set | 0.0006224 | 22 | 0.006883 | 101 | REACTOME - Abortive elongation of HIV-1 transcript in the absence of Tat gene set | www.pathwaycomm... |
Null Citric acid cycle (TCA cycle) | View Gene Set | 0.000652 | 19 | 0.00714 | 102 | REACTOME - Citric acid cycle (TCA cycle) gene set | www.pathwaycomm... |
Null Signalling by NGF | View Gene Set | 0.0007652 | 146 | 0.008299 | 103 | REACTOME - Signalling by NGF gene set | www.pathwaycomm... |
Null HIV-1 Transcription Initiation | View Gene Set | 0.0009357 | 40 | 0.009035 | 104 | REACTOME - HIV-1 Transcription Initiation gene set | www.pathwaycomm... |
Null RNA Polymerase II HIV-1 Promoter Escape | View Gene Set | 0.0009357 | 40 | 0.009035 | 104 | REACTOME - RNA Polymerase II HIV-1 Promoter Escape gene set | www.pathwaycomm... |
Null RNA Polymerase III Transcription | View Gene Set | 0.0008586 | 34 | 0.009035 | 104 | REACTOME - RNA Polymerase III Transcription gene set | www.pathwaycomm... |
Null RNA Polymerase III Abortive And Retractive Initiation | View Gene Set | 0.0008586 | 34 | 0.009035 | 104 | REACTOME - RNA Polymerase III Abortive And Retractive Initiation gene set | www.pathwaycomm... |
Null RNA Polymerase II Promoter Escape | View Gene Set | 0.0009357 | 40 | 0.009035 | 104 | REACTOME - RNA Polymerase II Promoter Escape gene set | www.pathwaycomm... |
Null RNA Polymerase II Transcription Initiation And Promoter Clearance | View Gene Set | 0.0009357 | 40 | 0.009035 | 104 | REACTOME - RNA Polymerase II Transcription Initiation And Promoter Clearance gene set | www.pathwaycomm... |
Null RNA Polymerase II Transcription Initiation | View Gene Set | 0.0009357 | 40 | 0.009035 | 104 | REACTOME - RNA Polymerase II Transcription Initiation gene set | www.pathwaycomm... |
Null RNA Polymerase II Transcription Pre-Initiation And Promoter Opening | View Gene Set | 0.0009357 | 40 | 0.009035 | 104 | REACTOME - RNA Polymerase II Transcription Pre-Initiation And Promoter Opening gene set | www.pathwaycomm... |
Null Cholesterol biosynthesis | View Gene Set | 0.0009382 | 20 | 0.009035 | 104 | REACTOME - Cholesterol biosynthesis gene set | www.pathwaycomm... |
Null Purine ribonucleoside monophosphate biosynthesis | View Gene Set | 0.0009086 | 7 | 0.009035 | 104 | REACTOME - Purine ribonucleoside monophosphate biosynthesis gene set | www.pathwaycomm... |
Null Assembly of the pre-replicative complex | View Gene Set | 0.000881 | 75 | 0.009035 | 104 | REACTOME - Assembly of the pre-replicative complex gene set | www.pathwaycomm... |
Null Conversion from APC/C:Cdc20 to APC/C:Cdh1 in late anaphase | View Gene Set | 0.0009297 | 16 | 0.009035 | 104 | REACTOME - Conversion from APC/C:Cdc20 to APC/C:Cdh1 in late anaphase gene set | www.pathwaycomm... |
Null Removal of licensing factors from origins | View Gene Set | 0.0008421 | 78 | 0.009035 | 104 | REACTOME - Removal of licensing factors from origins gene set | www.pathwaycomm... |
Null Recycling of eIF2:GDP | View Gene Set | 0.000951 | 8 | 0.009079 | 117 | REACTOME - Recycling of eIF2:GDP gene set | www.pathwaycomm... |
Null Influenza Infection | View Gene Set | 0.00122 | 143 | 0.01145 | 118 | REACTOME - Influenza Infection gene set | www.pathwaycomm... |
Null Viral Messenger RNA Synthesis | View Gene Set | 0.001219 | 14 | 0.01145 | 118 | REACTOME - Viral Messenger RNA Synthesis gene set | www.pathwaycomm... |
Null Formation of tubulin folding intermediates by CCT/TriC | View Gene Set | 0.001243 | 8 | 0.01157 | 120 | REACTOME - Formation of tubulin folding intermediates by CCT/TriC gene set | www.pathwaycomm... |
Null Regulation of DNA replication | View Gene Set | 0.001313 | 81 | 0.01212 | 121 | REACTOME - Regulation of DNA replication gene set | www.pathwaycomm... |
Null Lysine catabolism | View Gene Set | 0.001467 | 8 | 0.01343 | 122 | REACTOME - Lysine catabolism gene set | www.pathwaycomm... |
Null RSK activation | View Gene Set | 0.001694 | 7 | 0.01539 | 123 | REACTOME - RSK activation gene set | www.pathwaycomm... |
Null RNA Polymerase III Transcription Initiation | View Gene Set | 0.001863 | 29 | 0.01665 | 124 | REACTOME - RNA Polymerase III Transcription Initiation gene set | www.pathwaycomm... |
Null CREB phosphorylation | View Gene Set | 0.001853 | 7 | 0.01665 | 124 | REACTOME - CREB phosphorylation gene set | www.pathwaycomm... |
Null Eukaryotic Translation Elongation | View Gene Set | 0.001985 | 88 | 0.0176 | 126 | REACTOME - Eukaryotic Translation Elongation gene set | www.pathwaycomm... |
Null IRS-mediated signalling | View Gene Set | 0.002028 | 51 | 0.01784 | 127 | REACTOME - IRS-mediated signalling gene set | www.pathwaycomm... |
Null Insulin receptor signalling cascade | View Gene Set | 0.002181 | 56 | 0.01896 | 128 | REACTOME - Insulin receptor signalling cascade gene set | www.pathwaycomm... |
Null IRS-related events | View Gene Set | 0.00219 | 53 | 0.01896 | 128 | REACTOME - IRS-related events gene set | www.pathwaycomm... |
Null mRNA Capping | View Gene Set | 0.002415 | 29 | 0.02075 | 130 | REACTOME - mRNA Capping gene set | www.pathwaycomm... |
Null Transport to the Golgi and subsequent modification | View Gene Set | 0.002587 | 28 | 0.02206 | 131 | REACTOME - Transport to the Golgi and subsequent modification gene set | www.pathwaycomm... |
Null RNA Polymerase I RNA Polymerase III and Mitochondrial Transcription | View Gene Set | 0.002699 | 93 | 0.02284 | 132 | REACTOME - RNA Polymerase I RNA Polymerase III and Mitochondrial Transcription gene set | www.pathwaycomm... RNA Polymerase ... and Mitochondri... |
Null Synthesis Secretion and Deacylation of Ghrelin | View Gene Set | 0.002778 | 109 | 0.02333 | 133 | REACTOME - Synthesis Secretion and Deacylation of Ghrelin gene set | www.pathwaycomm... Secretion... and Deacylation... |
Null Late Phase of HIV Life Cycle | View Gene Set | 0.002875 | 92 | 0.02396 | 134 | REACTOME - Late Phase of HIV Life Cycle gene set | www.pathwaycomm... |
Null Synthesis Secretion and Inactivation of Glucagon-like Peptide-1 (GLP-1) | View Gene Set | 0.002951 | 112 | 0.02442 | 135 | REACTOME - Synthesis Secretion and Inactivation of Glucagon-like Peptide-1 (GLP-1) gene set | www.pathwaycomm... Secretion... and Inactivatio... |
Null ChREBP activates metabolic gene expression | View Gene Set | 0.003339 | 6 | 0.02723 | 136 | REACTOME - ChREBP activates metabolic gene expression gene set | www.pathwaycomm... |
Null Eukaryotic Translation Termination | View Gene Set | 0.003339 | 85 | 0.02723 | 136 | REACTOME - Eukaryotic Translation Termination gene set | www.pathwaycomm... |
Null Incretin Synthesis Secretion and Inactivation | View Gene Set | 0.004076 | 115 | 0.03299 | 138 | REACTOME - Incretin Synthesis Secretion and Inactivation gene set | www.pathwaycomm... Secretion... and Inactivatio... |
Null Nuclear Events (kinase and transcription factor activation) | View Gene Set | 0.004263 | 16 | 0.03426 | 139 | REACTOME - Nuclear Events (kinase and transcription factor activation) gene set | www.pathwaycomm... |
Null Cyclin E associated events during G1/S transition | View Gene Set | 0.004298 | 64 | 0.03429 | 140 | REACTOME - Cyclin E associated events during G1/S transition gene set | www.pathwaycomm... |
Null Pyruvate metabolism | View Gene Set | 0.004474 | 10 | 0.03545 | 141 | REACTOME - Pyruvate metabolism gene set | www.pathwaycomm... |
Null Integration of energy metabolism | View Gene Set | 0.004691 | 176 | 0.03668 | 142 | REACTOME - Integration of energy metabolism gene set | www.pathwaycomm... |
Null Peptide chain elongation | View Gene Set | 0.004696 | 85 | 0.03668 | 142 | REACTOME - Peptide chain elongation gene set | www.pathwaycomm... |
Null Formation of transcription-coupled NER (TC-NER) repair complex | View Gene Set | 0.004938 | 29 | 0.03804 | 144 | REACTOME - Formation of transcription-coupled NER (TC-NER) repair complex gene set | www.pathwaycomm... |
Null Dual incision reaction in TC-NER | View Gene Set | 0.004938 | 29 | 0.03804 | 144 | REACTOME - Dual incision reaction in TC-NER gene set | www.pathwaycomm... |
Null RNA Pol II CTD phosphorylation and interaction with CE | View Gene Set | 0.005166 | 27 | 0.03926 | 146 | REACTOME - RNA Pol II CTD phosphorylation and interaction with CE gene set | www.pathwaycomm... |
Null RNA Pol II CTD phosphorylation and interaction with CE - 11 | View Gene Set | 0.005166 | 27 | 0.03926 | 146 | REACTOME - RNA Pol II CTD phosphorylation and interaction with CE - 11 gene set | www.pathwaycomm... |
Null Metabolism of folate and pterines | View Gene Set | 0.005269 | 8 | 0.03977 | 148 | REACTOME - Metabolism of folate and pterines gene set | www.pathwaycomm... |
Null Viral mRNA Translation | View Gene Set | 0.006602 | 85 | 0.04917 | 149 | REACTOME - Viral mRNA Translation gene set | www.pathwaycomm... |
Null Association of TriC/CCT with target proteins during biosynthesis | View Gene Set | 0.006647 | 9 | 0.04917 | 149 | REACTOME - Association of TriC/CCT with target proteins during biosynthesis gene set | www.pathwaycomm... |
Null Activation of PKB | View Gene Set | 0.006626 | 4 | 0.04917 | 149 | REACTOME - Activation of PKB gene set | www.pathwaycomm... |
Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
Null hsa-miR-663 | View Gene Set | 2.499e-06 | 993 | 0.001692 | 1 | microRNA targets for hsa-miR-663 from miranda.targets | www.mirbase.org... |
Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
Null hsa-miR-296-5p | View Gene Set | 2.37e-05 | 755 | 0.008424 | 1 | microRNA targets for hsa-miR-296-5p from mirbase.targets | www.mirbase.org... |
Null hsa-miR-484 | View Gene Set | 2.076e-05 | 733 | 0.008424 | 1 | microRNA targets for hsa-miR-484 from mirbase.targets | www.mirbase.org... |
Null hsa-miR-612 | View Gene Set | 5.422e-05 | 685 | 0.009638 | 3 | microRNA targets for hsa-miR-612 from mirbase.targets | www.mirbase.org... |
Null hsa-miR-940 | View Gene Set | 4.369e-05 | 660 | 0.009638 | 3 | microRNA targets for hsa-miR-940 from mirbase.targets | www.mirbase.org... |
Null hsa-miR-661 | View Gene Set | 0.0001001 | 575 | 0.01423 | 5 | microRNA targets for hsa-miR-661 from mirbase.targets | www.mirbase.org... |
Null hsa-miR-149 | View Gene Set | 0.0002696 | 602 | 0.03194 | 6 | microRNA targets for hsa-miR-149 from mirbase.targets | www.mirbase.org... |
Null hsa-miR-324-3p | View Gene Set | 0.000333 | 788 | 0.03382 | 7 | microRNA targets for hsa-miR-324-3p from mirbase.targets | www.mirbase.org... |
Null hsa-miR-328 | View Gene Set | 0.0004731 | 685 | 0.03738 | 8 | microRNA targets for hsa-miR-328 from mirbase.targets | www.mirbase.org... |
Null hsa-miR-615-3p | View Gene Set | 0.0004543 | 757 | 0.03738 | 8 | microRNA targets for hsa-miR-615-3p from mirbase.targets | www.mirbase.org... |
Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
Null hsa-miR-100 | View Gene Set | 0.000439 | 40 | 0.0357 | 1 | microRNA targets for hsa-miR-100 from targetscan.targets | www.mirbase.org... |
Null hsa-miR-99a | View Gene Set | 0.000439 | 40 | 0.0357 | 1 | microRNA targets for hsa-miR-99a from targetscan.targets | www.mirbase.org... |
Null hsa-miR-99b | View Gene Set | 0.000439 | 40 | 0.0357 | 1 | microRNA targets for hsa-miR-99b from targetscan.targets | www.mirbase.org... |
Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-296-5p | View Gene Set | 2.008e-05 | 1519 | 0.03132 | 1 | microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-296-5p from miRNAtargetUnion | www.mirbase.org... |
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-663 | View Gene Set | 2.707e-05 | 1582 | 0.03132 | 1 | microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-663 from miRNAtargetUnion | www.mirbase.org... |
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-615-3p | View Gene Set | 8.81e-05 | 1113 | 0.03593 | 3 | microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-615-3p from miRNAtargetUnion | www.mirbase.org... |
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-615-3p | View Gene Set | 9.318e-05 | 1112 | 0.03593 | 3 | microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-615-3p from miRNAtargetUnion | www.mirbase.org... |
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-99a | View Gene Set | 8.159e-05 | 700 | 0.03593 | 3 | microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-99a from miRNAtargetUnion | www.mirbase.org... |
Null mirbase.pictar.targetscan.targetsUnion.hsa-miR-99a | View Gene Set | 5.31e-05 | 701 | 0.03593 | 3 | microRNA targets for mirbase.pictar.targetscan.targetsUnion.hsa-miR-99a from miRNAtargetUnion | www.mirbase.org... |
Null mirbase.pictar.targetscan.targetsUnion.hsa-miR-99b | View Gene Set | 0.000113 | 744 | 0.03736 | 7 | microRNA targets for mirbase.pictar.targetscan.targetsUnion.hsa-miR-99b from miRNAtargetUnion | www.mirbase.org... |
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-484 | View Gene Set | 0.0001946 | 1853 | 0.04164 | 8 | microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-484 from miRNAtargetUnion | www.mirbase.org... |
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-572 | View Gene Set | 0.0001978 | 825 | 0.04164 | 8 | microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-572 from miRNAtargetUnion | www.mirbase.org... |
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-324-3p | View Gene Set | 0.000198 | 1096 | 0.04164 | 8 | microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-324-3p from miRNAtargetUnion | www.mirbase.org... |
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-99b | View Gene Set | 0.0001486 | 744 | 0.04164 | 8 | microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-99b from miRNAtargetUnion | www.mirbase.org... |
Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
Null Androgen Receptor Signaling Pathway | View Gene Set | 0.0001752 | 437 | 0.003505 | 1 | From NetPath for Androgen Receptor Signaling Pathway | www.netpath.org... |
Gene Set Name | GeneSetDescription | Value | Gene Set Size | Corrected Value | Ranking | Description | URL |
---|---|---|---|---|---|---|---|
Null Androgen Receptor Signaling Pathway | View Gene Set | 0.0002622 | 586 | 0.005244 | 1 | From NetPath for Androgen Receptor Signaling Pathway | www.netpath.org... |