Results

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Go to: Gene Set Collection: KEGG
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AFA results for: tSAHAda2PC3

Click on the heading for any column to sort by that column.

Gene Set Collection: KEGG

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
KEGG 01100 View Gene Set 2.138e-08 1120 4.575e-06 1 Metabolic pathways www.genome.jp/d...
KEGG 00240 View Gene Set 6.008e-07 99 6.428e-05 2 Pyrimidine metabolism www.genome.jp/d...
KEGG 04110 View Gene Set 6.397e-06 128 0.0004563 3 Cell cycle www.genome.jp/d...
KEGG 00230 View Gene Set 3.454e-05 161 0.001566 4 Purine metabolism www.genome.jp/d...
KEGG 03040 View Gene Set 4.389e-05 128 0.001566 4 Spliceosome www.genome.jp/d...
KEGG 05130 View Gene Set 3.692e-05 59 0.001566 4 Pathogenic Escherichia coli infection www.genome.jp/d...
KEGG 00970 View Gene Set 0.0003392 41 0.01037 7 Aminoacyl-tRNA biosynthesis www.genome.jp/d...
KEGG 04120 View Gene Set 0.0004923 139 0.01317 8 Ubiquitin mediated proteolysis www.genome.jp/d...
KEGG 03020 View Gene Set 0.000656 29 0.0156 9 RNA polymerase www.genome.jp/d...
KEGG 03410 View Gene Set 0.001069 34 0.02121 10 Base excision repair www.genome.jp/d...
KEGG 03420 View Gene Set 0.00109 44 0.02121 10 Nucleotide excision repair www.genome.jp/d...
KEGG 03030 View Gene Set 0.001387 36 0.02474 12 DNA replication www.genome.jp/d...
KEGG 00510 View Gene Set 0.001694 48 0.02788 13 N-Glycan biosynthesis www.genome.jp/d...
KEGG 04144 View Gene Set 0.001938 205 0.02962 14 Endocytosis www.genome.jp/d...
KEGG 05222 View Gene Set 0.002193 84 0.03128 15 Small cell lung cancer www.genome.jp/d...
KEGG 05016 View Gene Set 0.003074 184 0.04111 16 Huntington's disease www.genome.jp/d...
KEGG 04210 View Gene Set 0.004034 88 0.04879 17 Apoptosis www.genome.jp/d...
KEGG 05131 View Gene Set 0.004104 64 0.04879 17 Shigellosis www.genome.jp/d...

Gene Set Collection: GO

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
GO GO:0044424 View Gene Set 9.728e-60 10976 1.3e-55 1 intracellular part amigo.geneontol...
GO GO:0005622 View Gene Set 1.988e-58 11329 1.328e-54 2 intracellular amigo.geneontol...
GO GO:0043229 View Gene Set 5.86e-52 9346 2.61e-48 3 intracellular organelle amigo.geneontol...
GO GO:0043226 View Gene Set 8.824e-52 9360 2.947e-48 4 organelle amigo.geneontol...
GO GO:0043227 View Gene Set 2.931e-51 8383 7.832e-48 5 membrane-bounded organelle amigo.geneontol...
GO GO:0043231 View Gene Set 4.674e-51 8376 1.041e-47 6 intracellular membrane-bounded organelle amigo.geneontol...
GO GO:0005737 View Gene Set 3.879e-38 7676 7.404e-35 7 cytoplasm amigo.geneontol...
GO GO:0044446 View Gene Set 4.393e-36 5019 7.336e-33 8 intracellular organelle part amigo.geneontol...
GO GO:0044422 View Gene Set 1.661e-35 5089 2.466e-32 9 organelle part amigo.geneontol...
GO GO:0005739 View Gene Set 3.107e-33 1274 4.151e-30 10 mitochondrion amigo.geneontol...
GO GO:0031974 View Gene Set 6.131e-28 1917 7.447e-25 11 membrane-enclosed lumen amigo.geneontol...
GO GO:0070013 View Gene Set 1.433e-26 1845 1.595e-23 12 intracellular organelle lumen amigo.geneontol...
GO GO:0043233 View Gene Set 4.65e-26 1881 4.779e-23 13 organelle lumen amigo.geneontol...
GO GO:0044428 View Gene Set 6.968e-24 1938 6.65e-21 14 nuclear part amigo.geneontol...
GO GO:0044444 View Gene Set 8.422e-24 5184 7.501e-21 15 cytoplasmic part amigo.geneontol...
GO GO:0005634 View Gene Set 1.077e-23 5198 8.993e-21 16 nucleus amigo.geneontol...
GO GO:0031981 View Gene Set 1.611e-21 1518 1.266e-18 17 nuclear lumen amigo.geneontol...
GO GO:0044237 View Gene Set 3.948e-20 7431 2.931e-17 18 cellular metabolic process amigo.geneontol...
GO GO:0044260 View Gene Set 5.822e-19 5699 4.094e-16 19 cellular macromolecule metabolic process amigo.geneontol...
GO GO:0044429 View Gene Set 1.006e-16 619 6.723e-14 20 mitochondrial part amigo.geneontol...
GO GO:0043228 View Gene Set 1.134e-16 2690 6.889e-14 21 non-membrane-bounded organelle amigo.geneontol...
GO GO:0043232 View Gene Set 1.134e-16 2690 6.889e-14 21 intracellular non-membrane-bounded organelle amigo.geneontol...
GO GO:0005515 View Gene Set 1.431e-16 8146 8.311e-14 23 protein binding amigo.geneontol...
GO GO:0008152 View Gene Set 5.285e-16 8439 2.942e-13 24 metabolic process amigo.geneontol...
GO GO:0009987 View Gene Set 9.88e-15 11620 5.28e-12 25 cellular process amigo.geneontol...
GO GO:0034660 View Gene Set 1.734e-14 236 8.912e-12 26 ncRNA metabolic process amigo.geneontol...
GO GO:0043170 View Gene Set 2.75e-14 6274 1.361e-11 27 macromolecule metabolic process amigo.geneontol...
GO GO:0034470 View Gene Set 1.136e-13 193 5.419e-11 28 ncRNA processing amigo.geneontol...
GO GO:0005730 View Gene Set 2.35e-13 734 1.077e-10 29 nucleolus amigo.geneontol...
GO GO:0003723 View Gene Set 2.418e-13 732 1.077e-10 29 RNA binding amigo.geneontol...
GO GO:0044238 View Gene Set 3.549e-13 7629 1.53e-10 31 primary metabolic process amigo.geneontol...
GO GO:0044464 View Gene Set 5.786e-13 15066 2.416e-10 32 cell part amigo.geneontol...
GO GO:0005623 View Gene Set 6.282e-13 15067 2.543e-10 33 cell amigo.geneontol...
GO GO:0006396 View Gene Set 7.198e-13 578 2.794e-10 34 RNA processing amigo.geneontol...
GO GO:0006996 View Gene Set 7.32e-13 1501 2.794e-10 34 organelle organization amigo.geneontol...
GO GO:0010467 View Gene Set 9.545e-13 3806 3.542e-10 36 gene expression amigo.geneontol...
GO GO:0005488 View Gene Set 1.144e-12 12334 4.132e-10 37 binding amigo.geneontol...
GO GO:0003824 View Gene Set 3.246e-12 5198 1.141e-09 38 catalytic activity amigo.geneontol...
GO GO:0090304 View Gene Set 9.355e-12 3724 3.205e-09 39 nucleic acid metabolic process amigo.geneontol...
GO GO:0031967 View Gene Set 1.032e-11 672 3.448e-09 40 organelle envelope amigo.geneontol...
GO GO:0022613 View Gene Set 1.257e-11 194 4.094e-09 41 ribonucleoprotein complex biogenesis amigo.geneontol...
GO GO:0005654 View Gene Set 1.741e-11 939 5.538e-09 42 nucleoplasm amigo.geneontol...
GO GO:0044085 View Gene Set 2.182e-11 1167 6.77e-09 43 cellular component biogenesis amigo.geneontol...
GO GO:0032991 View Gene Set 2.261e-11 3237 6.77e-09 43 macromolecular complex amigo.geneontol...
GO GO:0003676 View Gene Set 2.28e-11 2979 6.77e-09 43 nucleic acid binding amigo.geneontol...
GO GO:0031975 View Gene Set 5.391e-11 685 1.566e-08 46 envelope amigo.geneontol...
GO GO:0005740 View Gene Set 8.077e-11 444 2.296e-08 47 mitochondrial envelope amigo.geneontol...
GO GO:0044267 View Gene Set 1.037e-10 2465 2.888e-08 48 cellular protein metabolic process amigo.geneontol...
GO GO:0042254 View Gene Set 1.545e-10 130 4.212e-08 49 ribosome biogenesis amigo.geneontol...
GO GO:0016043 View Gene Set 2.349e-10 2937 6.277e-08 50 cellular component organization amigo.geneontol...
GO GO:0034641 View Gene Set 3.939e-10 4584 1.032e-07 51 cellular nitrogen compound metabolic process amigo.geneontol...
GO GO:0007049 View Gene Set 4.737e-10 1006 1.217e-07 52 cell cycle amigo.geneontol...
GO GO:0016072 View Gene Set 6.335e-10 101 1.597e-07 53 rRNA metabolic process amigo.geneontol...
GO GO:0006807 View Gene Set 6.883e-10 4698 1.703e-07 54 nitrogen compound metabolic process amigo.geneontol...
GO GO:0006139 View Gene Set 7.198e-10 4294 1.748e-07 55 nucleobase nucleoside nucleotide and nucleic acid metabolic process amigo.geneontol...
GO GO:0006364 View Gene Set 7.883e-10 97 1.881e-07 56 rRNA processing amigo.geneontol...
GO GO:0034645 View Gene Set 1.966e-09 3529 4.609e-07 57 cellular macromolecule biosynthetic process amigo.geneontol...
GO GO:0043933 View Gene Set 2.753e-09 836 6.342e-07 58 macromolecular complex subunit organization amigo.geneontol...
GO GO:0006412 View Gene Set 3.631e-09 412 8.223e-07 59 translation amigo.geneontol...
GO GO:0044249 View Gene Set 3.711e-09 4326 8.264e-07 60 cellular biosynthetic process amigo.geneontol...
GO GO:0005759 View Gene Set 3.92e-09 223 8.447e-07 61 mitochondrial matrix amigo.geneontol...
GO GO:0031980 View Gene Set 3.92e-09 223 8.447e-07 61 mitochondrial lumen amigo.geneontol...
GO GO:0034621 View Gene Set 3.985e-09 458 8.451e-07 63 cellular macromolecular complex subunit organization amigo.geneontol...
GO GO:0031966 View Gene Set 4.052e-09 420 8.459e-07 64 mitochondrial membrane amigo.geneontol...
GO GO:0031090 View Gene Set 5.417e-09 1905 1.113e-06 65 organelle membrane amigo.geneontol...
GO GO:0009058 View Gene Set 6.054e-09 4436 1.225e-06 66 biosynthetic process amigo.geneontol...
GO GO:0065003 View Gene Set 8.575e-09 763 1.71e-06 67 macromolecular complex assembly amigo.geneontol...
GO GO:0009059 View Gene Set 1.58e-08 3597 3.104e-06 68 macromolecule biosynthetic process amigo.geneontol...
GO GO:0030529 View Gene Set 2.417e-08 504 4.679e-06 69 ribonucleoprotein complex amigo.geneontol...
GO GO:0034622 View Gene Set 4.182e-08 393 7.981e-06 70 cellular macromolecular complex assembly amigo.geneontol...
GO GO:0006399 View Gene Set 5.87e-08 118 1.105e-05 71 tRNA metabolic process amigo.geneontol...
GO GO:0005829 View Gene Set 1.457e-07 1323 2.703e-05 72 cytosol amigo.geneontol...
GO GO:0022607 View Gene Set 2.8e-07 1043 5.124e-05 73 cellular component assembly amigo.geneontol...
GO GO:0007005 View Gene Set 3.42e-07 139 6.174e-05 74 mitochondrion organization amigo.geneontol...
GO GO:0033554 View Gene Set 4.466e-07 698 7.956e-05 75 cellular response to stress amigo.geneontol...
GO GO:0008033 View Gene Set 5.166e-07 78 9.081e-05 76 tRNA processing amigo.geneontol...
GO GO:0016070 View Gene Set 6.105e-07 2596 0.0001059 77 RNA metabolic process amigo.geneontol...
GO GO:0019538 View Gene Set 7.222e-07 2935 0.0001237 78 protein metabolic process amigo.geneontol...
GO GO:0000278 View Gene Set 7.683e-07 489 0.0001299 79 mitotic cell cycle amigo.geneontol...
GO GO:0008104 View Gene Set 1.264e-06 1048 0.0002112 80 protein localization amigo.geneontol...
GO GO:0005743 View Gene Set 1.369e-06 305 0.0002258 81 mitochondrial inner membrane amigo.geneontol...
GO GO:0045184 View Gene Set 1.41e-06 904 0.0002297 82 establishment of protein localization amigo.geneontol...
GO GO:0005694 View Gene Set 2.23e-06 507 0.0003547 83 chromosome amigo.geneontol...
GO GO:0043234 View Gene Set 2.217e-06 2680 0.0003547 83 protein complex amigo.geneontol...
GO GO:0051276 View Gene Set 2.399e-06 548 0.000373 85 chromosome organization amigo.geneontol...
GO GO:0019866 View Gene Set 2.401e-06 334 0.000373 85 organelle inner membrane amigo.geneontol...
GO GO:0015031 View Gene Set 2.728e-06 888 0.0004189 87 protein transport amigo.geneontol...
GO GO:0022402 View Gene Set 2.813e-06 676 0.000427 88 cell cycle process amigo.geneontol...
GO GO:0033036 View Gene Set 3.501e-06 1256 0.0005255 89 macromolecule localization amigo.geneontol...
GO GO:0016779 View Gene Set 3.676e-06 120 0.0005456 90 nucleotidyltransferase activity amigo.geneontol...
GO GO:0006974 View Gene Set 4.563e-06 412 0.00067 91 response to DNA damage stimulus amigo.geneontol...
GO GO:0008380 View Gene Set 4.711e-06 300 0.0006841 92 RNA splicing amigo.geneontol...
GO GO:0046907 View Gene Set 5.675e-06 753 0.0008152 93 intracellular transport amigo.geneontol...
GO GO:0009057 View Gene Set 6.63e-06 570 0.0009423 94 macromolecule catabolic process amigo.geneontol...
GO GO:0016740 View Gene Set 8.084e-06 1691 0.001137 95 transferase activity amigo.geneontol...
GO GO:0000166 View Gene Set 1.057e-05 2257 0.001471 96 nucleotide binding amigo.geneontol...
GO GO:0006325 View Gene Set 1.08e-05 425 0.001488 97 chromatin organization amigo.geneontol...
GO GO:0009451 View Gene Set 1.124e-05 51 0.001533 98 RNA modification amigo.geneontol...
GO GO:0001522 View Gene Set 1.208e-05 14 0.001631 99 pseudouridine synthesis amigo.geneontol...
GO GO:0016628 View Gene Set 1.314e-05 21 0.001755 100 oxidoreductase activity acting on the CH-CH group of donors NAD or NADP as acceptor amigo.geneontol...
GO GO:0071103 View Gene Set 1.345e-05 140 0.00178 101 DNA conformation change amigo.geneontol...
GO GO:0006461 View Gene Set 1.398e-05 595 0.001814 102 protein complex assembly amigo.geneontol...
GO GO:0070271 View Gene Set 1.398e-05 595 0.001814 102 protein complex biogenesis amigo.geneontol...
GO GO:0006259 View Gene Set 1.436e-05 592 0.001845 104 DNA metabolic process amigo.geneontol...
GO GO:0051726 View Gene Set 1.471e-05 451 0.001872 105 regulation of cell cycle amigo.geneontol...
GO GO:0044451 View Gene Set 1.748e-05 600 0.002203 106 nucleoplasm part amigo.geneontol...
GO GO:0016874 View Gene Set 1.924e-05 436 0.002403 107 ligase activity amigo.geneontol...
GO GO:0006281 View Gene Set 1.946e-05 309 0.002407 108 DNA repair amigo.geneontol...
GO GO:0051301 View Gene Set 2.062e-05 358 0.002528 109 cell division amigo.geneontol...
GO GO:0043412 View Gene Set 2.719e-05 1848 0.003303 110 macromolecule modification amigo.geneontol...
GO GO:0005840 View Gene Set 2.981e-05 198 0.003588 111 ribosome amigo.geneontol...
GO GO:0022403 View Gene Set 3.09e-05 522 0.003654 112 cell cycle phase amigo.geneontol...
GO GO:0044265 View Gene Set 3.08e-05 479 0.003654 112 cellular macromolecule catabolic process amigo.geneontol...
GO GO:0030163 View Gene Set 3.241e-05 398 0.003798 114 protein catabolic process amigo.geneontol...
GO GO:0051186 View Gene Set 3.99e-05 215 0.004635 115 cofactor metabolic process amigo.geneontol...
GO GO:0044427 View Gene Set 4.247e-05 420 0.004892 116 chromosomal part amigo.geneontol...
GO GO:0006417 View Gene Set 4.91e-05 151 0.005607 117 regulation of translation amigo.geneontol...
GO GO:0001836 View Gene Set 5.61e-05 26 0.006351 118 release of cytochrome c from mitochondria amigo.geneontol...
GO GO:0031968 View Gene Set 6.002e-05 110 0.006739 119 organelle outer membrane amigo.geneontol...
GO GO:0000280 View Gene Set 6.377e-05 276 0.007041 120 nuclear division amigo.geneontol...
GO GO:0007067 View Gene Set 6.377e-05 276 0.007041 120 mitosis amigo.geneontol...
GO GO:0009156 View Gene Set 7e-05 24 0.007666 122 ribonucleoside monophosphate biosynthetic process amigo.geneontol...
GO GO:0010608 View Gene Set 8.262e-05 247 0.008973 123 posttranscriptional regulation of gene expression amigo.geneontol...
GO GO:0022900 View Gene Set 8.98e-05 115 0.009676 124 electron transport chain amigo.geneontol...
GO GO:0055114 View Gene Set 0.0001079 647 0.01153 125 oxidation reduction amigo.geneontol...
GO GO:0006886 View Gene Set 0.0001091 439 0.01157 126 intracellular protein transport amigo.geneontol...
GO GO:0019867 View Gene Set 0.0001217 115 0.01271 127 outer membrane amigo.geneontol...
GO GO:0048037 View Gene Set 0.0001216 249 0.01271 127 cofactor binding amigo.geneontol...
GO GO:0012501 View Gene Set 0.0001351 1141 0.01399 129 programmed cell death amigo.geneontol...
GO GO:0009982 View Gene Set 0.0001366 14 0.01404 130 pseudouridine synthase activity amigo.geneontol...
GO GO:0048285 View Gene Set 0.0001427 286 0.01455 131 organelle fission amigo.geneontol...
GO GO:0016071 View Gene Set 0.0001442 381 0.01459 132 mRNA metabolic process amigo.geneontol...
GO GO:0030684 View Gene Set 0.0001479 14 0.01486 133 preribosome amigo.geneontol...
GO GO:0006915 View Gene Set 0.0001544 1133 0.0154 134 apoptosis amigo.geneontol...
GO GO:0034613 View Gene Set 0.0001593 501 0.01576 135 cellular protein localization amigo.geneontol...
GO GO:0010941 View Gene Set 0.0001636 904 0.01595 136 regulation of cell death amigo.geneontol...
GO GO:0016651 View Gene Set 0.0001628 84 0.01595 136 oxidoreductase activity acting on NADH or NADPH amigo.geneontol...
GO GO:0070727 View Gene Set 0.000173 503 0.01675 138 cellular macromolecule localization amigo.geneontol...
GO GO:0000087 View Gene Set 0.0001802 286 0.01685 139 M phase of mitotic cell cycle amigo.geneontol...
GO GO:0006400 View Gene Set 0.0001816 18 0.01685 139 tRNA modification amigo.geneontol...
GO GO:0033043 View Gene Set 0.0001807 251 0.01685 139 regulation of organelle organization amigo.geneontol...
GO GO:0034728 View Gene Set 0.0001812 93 0.01685 139 nucleosome organization amigo.geneontol...
GO GO:0051188 View Gene Set 0.0001802 112 0.01685 139 cofactor biosynthetic process amigo.geneontol...
GO GO:0060548 View Gene Set 0.0001814 415 0.01685 139 negative regulation of cell death amigo.geneontol...
GO GO:0031970 View Gene Set 0.0001862 40 0.01716 145 organelle envelope lumen amigo.geneontol...
GO GO:0009161 View Gene Set 0.0001889 28 0.01722 146 ribonucleoside monophosphate metabolic process amigo.geneontol...
GO GO:0016853 View Gene Set 0.0001894 132 0.01722 146 isomerase activity amigo.geneontol...
GO GO:0051493 View Gene Set 0.0001926 148 0.01739 148 regulation of cytoskeleton organization amigo.geneontol...
GO GO:0070161 View Gene Set 0.0001951 163 0.01749 149 anchoring junction amigo.geneontol...
GO GO:0006733 View Gene Set 0.0002035 52 0.01813 150 oxidoreduction coenzyme metabolic process amigo.geneontol...
GO GO:0016491 View Gene Set 0.0002112 689 0.01869 151 oxidoreductase activity amigo.geneontol...
GO GO:0016627 View Gene Set 0.0002285 53 0.02008 152 oxidoreductase activity acting on the CH-CH group of donors amigo.geneontol...
GO GO:0043067 View Gene Set 0.0002385 897 0.02082 153 regulation of programmed cell death amigo.geneontol...
GO GO:0005885 View Gene Set 0.0002419 7 0.02098 154 Arp2/3 protein complex amigo.geneontol...
GO GO:0009262 View Gene Set 0.0002442 27 0.02105 155 deoxyribonucleotide metabolic process amigo.geneontol...
GO GO:0008135 View Gene Set 0.0002461 86 0.02107 156 translation factor activity nucleic acid binding amigo.geneontol...
GO GO:0006743 View Gene Set 0.0002544 9 0.02138 157 ubiquinone metabolic process amigo.geneontol...
GO GO:0006744 View Gene Set 0.0002544 9 0.02138 157 ubiquinone biosynthetic process amigo.geneontol...
GO GO:0045426 View Gene Set 0.0002544 9 0.02138 157 quinone cofactor biosynthetic process amigo.geneontol...
GO GO:0044257 View Gene Set 0.0002628 349 0.02195 160 cellular protein catabolic process amigo.geneontol...
GO GO:0003899 View Gene Set 0.0002689 42 0.02218 161 DNA-directed RNA polymerase activity amigo.geneontol...
GO GO:0034062 View Gene Set 0.0002689 42 0.02218 161 RNA polymerase activity amigo.geneontol...
GO GO:0006323 View Gene Set 0.0002877 119 0.02358 163 DNA packaging amigo.geneontol...
GO GO:0043069 View Gene Set 0.0002963 409 0.02414 164 negative regulation of programmed cell death amigo.geneontol...
GO GO:0000407 View Gene Set 0.0002998 9 0.02419 165 pre-autophagosomal structure amigo.geneontol...
GO GO:0016655 View Gene Set 0.0003006 50 0.02419 165 oxidoreductase activity acting on NADH or NADPH quinone or similar compound as acceptor amigo.geneontol...
GO GO:0045333 View Gene Set 0.0003081 100 0.02465 167 cellular respiration amigo.geneontol...
GO GO:0000279 View Gene Set 0.0003121 406 0.02482 168 M phase amigo.geneontol...
GO GO:0051603 View Gene Set 0.0003259 346 0.02561 169 proteolysis involved in cellular protein catabolic process amigo.geneontol...
GO GO:0031902 View Gene Set 0.0003253 64 0.02561 169 late endosome membrane amigo.geneontol...
GO GO:0000775 View Gene Set 0.000332 146 0.02594 171 chromosome centromeric region amigo.geneontol...
GO GO:0009394 View Gene Set 0.0003354 21 0.02596 172 2'-deoxyribonucleotide metabolic process amigo.geneontol...
GO GO:0042981 View Gene Set 0.0003381 889 0.02596 172 regulation of apoptosis amigo.geneontol...
GO GO:0043161 View Gene Set 0.0003374 162 0.02596 172 proteasomal ubiquitin-dependent protein catabolic process amigo.geneontol...
GO GO:0022618 View Gene Set 0.0003415 76 0.02604 175 ribonucleoprotein complex assembly amigo.geneontol...
GO GO:0050662 View Gene Set 0.000343 176 0.02604 175 coenzyme binding amigo.geneontol...
GO GO:0032268 View Gene Set 0.0003519 576 0.02656 177 regulation of cellular protein metabolic process amigo.geneontol...
GO GO:0005741 View Gene Set 0.0003579 90 0.02686 178 mitochondrial outer membrane amigo.geneontol...
GO GO:0000315 View Gene Set 0.0003884 18 0.02883 179 organellar large ribosomal subunit amigo.geneontol...
GO GO:0005762 View Gene Set 0.0003884 18 0.02883 179 mitochondrial large ribosomal subunit amigo.geneontol...
GO GO:0010498 View Gene Set 0.0004121 166 0.03041 181 proteasomal protein catabolic process amigo.geneontol...
GO GO:0006511 View Gene Set 0.000419 296 0.03076 182 ubiquitin-dependent protein catabolic process amigo.geneontol...
GO GO:0043066 View Gene Set 0.0004306 404 0.03143 183 negative regulation of apoptosis amigo.geneontol...
GO GO:0008637 View Gene Set 0.0004346 34 0.03156 184 apoptotic mitochondrial changes amigo.geneontol...
GO GO:0031497 View Gene Set 0.0004405 87 0.03181 185 chromatin assembly amigo.geneontol...
GO GO:0006732 View Gene Set 0.0004494 164 0.03228 186 coenzyme metabolic process amigo.geneontol...
GO GO:0065004 View Gene Set 0.0004698 99 0.03356 187 protein-DNA complex assembly amigo.geneontol...
GO GO:0032446 View Gene Set 0.0004794 310 0.03407 188 protein modification by small protein conjugation amigo.geneontol...
GO GO:0005912 View Gene Set 0.0004847 146 0.03426 189 adherens junction amigo.geneontol...
GO GO:0009127 View Gene Set 0.0005226 17 0.03655 190 purine nucleoside monophosphate biosynthetic process amigo.geneontol...
GO GO:0009168 View Gene Set 0.0005226 17 0.03655 190 purine ribonucleoside monophosphate biosynthetic process amigo.geneontol...
GO GO:0008219 View Gene Set 0.0005347 1250 0.03702 192 cell death amigo.geneontol...
GO GO:0051246 View Gene Set 0.0005329 652 0.03702 192 regulation of protein metabolic process amigo.geneontol...
GO GO:0060255 View Gene Set 0.0005567 3411 0.03834 194 regulation of macromolecule metabolic process amigo.geneontol...
GO GO:0019941 View Gene Set 0.0005722 302 0.03901 195 modification-dependent protein catabolic process amigo.geneontol...
GO GO:0043632 View Gene Set 0.0005722 302 0.03901 195 modification-dependent macromolecule catabolic process amigo.geneontol...
GO GO:0017076 View Gene Set 0.0005822 1934 0.03948 197 purine nucleotide binding amigo.geneontol...
GO GO:0006464 View Gene Set 0.0006019 1768 0.04021 198 protein modification process amigo.geneontol...
GO GO:0016265 View Gene Set 0.0005963 1253 0.04021 198 death amigo.geneontol...
GO GO:0003735 View Gene Set 0.0006014 158 0.04021 198 structural constituent of ribosome amigo.geneontol...

Gene Set Collection: Broad.c2.CGP

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad DIAZ_CHRONIC_MEYLOGENOUS_LEUKEMIA_UP View Gene Set 1.323e-46 1353 3.165e-43 1 Genes up-regulated in CD34+ [Gene ID=947] cells isolated from bone marrow of CML (chronic myelogenous leukemia) patients compared to those from normal donors. www.broad.mit.e...
Broad NUYTTEN_EZH2_TARGETS_UP View Gene Set 5.187e-44 944 6.204e-41 2 Genes up-regulated in PC3 cells (prostate cancer) after knockdown of EZH2 [Gene ID=2146] by RNAi. www.broad.mit.e...
Broad KRIGE_RESPONSE_TO_TOSEDOSTAT_24HR_DN View Gene Set 6.559e-41 920 5.23e-38 3 Genes down-regulated in HL-60 cells (acute promyelocytic leukemia APL) after treatment with the aminopeptidase inhibitor tosedostat (CHR-2797) [PubChem=15547703] for 24 h. www.broad.mit.e...
Broad KRIGE_RESPONSE_TO_TOSEDOSTAT_6HR_DN View Gene Set 1.79e-37 832 1.07e-34 4 Genes down-regulated in HL-60 cells (acute promyelocytic leukemia APL) after treatment with the aminopeptidase inhibitor tosedostat (CHR-2797) [PubChem=15547703] for 6 h. www.broad.mit.e...
Broad NUYTTEN_EZH2_TARGETS_DN View Gene Set 7.274e-36 859 3.48e-33 5 Genes down-regulated in PC3 cells (prostate cancer) after knockdown of EZH2 [Gene ID=2146] by RNAi. www.broad.mit.e...
Broad CAIRO_HEPATOBLASTOMA_CLASSES_UP View Gene Set 1.184e-30 577 4.721e-28 6 Genes up-regulated in robust Cluster 2 (rC2) of hepatoblastoma samples compared to those in the robust Cluster 1 (rC1). www.broad.mit.e...
Broad NUYTTEN_NIPP1_TARGETS_UP View Gene Set 3.645e-30 657 1.246e-27 7 Genes up-regulated in PC3 cells (prostate cancer) after knockdown of NIPP1 [Gene ID=5511] by RNAi. www.broad.mit.e...
Broad WEI_MYCN_TARGETS_WITH_E_BOX View Gene Set 1.032e-29 757 3.085e-27 8 Genes whose promoters contain E-box motifs and whose expression changed in MYCN-3 cells (neuroblastoma) upon induction of MYCN [Gene ID=4613]. www.broad.mit.e...
Broad TIEN_INTESTINE_PROBIOTICS_24HR_UP View Gene Set 9.732e-29 537 2.587e-26 9 Genes up-regulated in Caco-2 cells (intestinal epithelium) after coculture with the probiotic bacteria L. casei for 24h. www.broad.mit.e...
Broad DODD_NASOPHARYNGEAL_CARCINOMA_DN View Gene Set 4.693e-28 1253 1.123e-25 10 Genes down-regulated in nasopharyngeal carcinoma (NPC) compared to the normal tissue. www.broad.mit.e...
Broad MANALO_HYPOXIA_DN View Gene Set 1.831e-27 276 3.982e-25 11 Genes down-regulated in response to both hypoxia and overexpression of an active form of HIF1A [Gene ID=3091]. www.broad.mit.e...
Broad CHARAFE_BREAST_CANCER_LUMINAL_VS_BASAL_DN View Gene Set 5.943e-27 437 1.185e-24 12 Genes down-regulated in luminal-like breast cancer cell lines compared to the basal-like ones. www.broad.mit.e...
Broad PUJANA_BRCA1_PCC_NETWORK View Gene Set 1.772e-26 1582 3.261e-24 13 Genes constituting the BRCA1-PCC network of transcripts whose expression positively correlated (Pearson correlation coefficient PCC >= 0.4) with that of BRCA1 [Gene ID=672] across a compendium of normal tissues. www.broad.mit.e...
Broad KINSEY_TARGETS_OF_EWSR1_FLII_FUSION_UP View Gene Set 5.169e-25 1180 8.831e-23 14 Genes up-regulated in TC71 and EWS502 cells (Ewing's sarcoma) upon knockdown of the EWSR1-FLII fusion [Gene ID=2130 2314]. www.broad.mit.e...
Broad KRIGE_RESPONSE_TO_TOSEDOSTAT_6HR_UP View Gene Set 4.183e-23 869 6.671e-21 15 Genes up-regulated in HL-60 cells (acute promyelocytic leukemia APL) after treatment with the aminopeptidase inhibitor tosedostat (CHR-2797) [PubChem=15547703] for 6 h. www.broad.mit.e...
Broad PUJANA_CHEK2_PCC_NETWORK View Gene Set 1.177e-22 744 1.76e-20 16 Genes constituting the CHEK2-PCC network of transcripts whose expression positively correlates (Pearson correlation coefficient PCC >= 0.4) with that of CHEK2 [Gene ID=11200]. www.broad.mit.e...
Broad BUYTAERT_PHOTODYNAMIC_THERAPY_STRESS_DN View Gene Set 2.559e-21 599 3.601e-19 17 Genes down-regulated in T24 (bladder cancer) cells in response to the photodynamic therapy (PDT) stress. www.broad.mit.e...
Broad ONKEN_UVEAL_MELANOMA_UP View Gene Set 2.972e-21 739 3.949e-19 18 Genes up-regulated in uveal melanoma: class 2 vs class 1 tumors. www.broad.mit.e...
Broad ACEVEDO_LIVER_CANCER_UP View Gene Set 1.155e-20 915 1.454e-18 19 Genes up-regulated in hepatocellular carcinoma (HCC) compared to normal liver samples. www.broad.mit.e...
Broad NUYTTEN_NIPP1_TARGETS_DN View Gene Set 2.537e-20 758 3.034e-18 20 Genes down-regulated in PC3 cells (prostate cancer) after knockdown of NIPP1 [Gene ID=5511] by RNAi. www.broad.mit.e...
Broad ACEVEDO_LIVER_TUMOR_VS_NORMAL_ADJACENT_TISSUE_UP View Gene Set 4.75e-20 806 5.41e-18 21 Genes up-regulated in liver tumor compared to the normal adjacent tissue. www.broad.mit.e...
Broad BILD_MYC_ONCOGENIC_SIGNATURE View Gene Set 5.55e-20 187 6.034e-18 22 Genes selected in supervised analyses to discriminate cells expressing c-Myc [Gene ID=4609] from control cells expressing GFP. www.broad.mit.e...
Broad CASORELLI_ACUTE_PROMYELOCYTIC_LEUKEMIA_DN View Gene Set 7.238e-20 639 7.527e-18 23 Genes down-regulated in APL (acute promyeolocytic leukemia) blasts expressing PML-RARA fusion [Gene ID=5371 5914] compared to normal promyeloblasts. www.broad.mit.e...
Broad BERENJENO_TRANSFORMED_BY_RHOA_UP View Gene Set 2.172e-19 485 2.165e-17 24 Genes up-regulated in NIH3T3 cells (fibroblasts) transformed by expression of contitutively active (Q63L) form of RHOA [Gene ID=387] off plasmid vector. www.broad.mit.e...
Broad GARY_CD5_TARGETS_DN View Gene Set 3.657e-19 415 3.499e-17 25 Genes down-regulated in Daudi cells (B lymphocytes) stably expressing CD5 [Gene ID=921] off a plasmid vector. www.broad.mit.e...
Broad BENPORATH_NANOG_TARGETS View Gene Set 1.148e-18 946 1.056e-16 26 Set 'Nanog targets': genes upregulated and identified by ChIP on chip as Nanog [Gene ID=79923] transcription factor targets in human embryonic stem cells. www.broad.mit.e...
Broad WU_CELL_MIGRATION View Gene Set 1.8e-18 182 1.595e-16 27 Genes associated with migration rate of 40 human bladder cancer cells. www.broad.mit.e...
Broad RODRIGUES_THYROID_CARCINOMA_POORLY_DIFFERENTIATED_UP View Gene Set 2.548e-18 589 2.177e-16 28 Genes up-regulated in poorly differentiated thyroid carcinoma (PDTC) compared to normal thyroid tissue. www.broad.mit.e...
Broad DANG_BOUND_BY_MYC View Gene Set 3.31e-18 1045 2.73e-16 29 Genes whose promoters are bound by MYC [Gene ID=4609] according to MYC Target Gene Database. www.broad.mit.e...
Broad BLALOCK_ALZHEIMERS_DISEASE_DN View Gene Set 3.888e-18 1209 3.1e-16 30 Genes down-regulated in brain from patients with Alzheimer's disease. www.broad.mit.e...
Broad RHEIN_ALL_GLUCOCORTICOID_THERAPY_DN View Gene Set 7.951e-18 351 6.135e-16 31 Genes down-regulated in ALL (acute lymphoblastic leukemia) blasts after 1 week of treatment with glucocorticoids. www.broad.mit.e...
Broad SENESE_HDAC1_TARGETS_UP View Gene Set 2.832e-17 427 2.117e-15 32 Genes up-regulated in U2OS cells (osteosarcoma) upon knockdown of HDAC1 [Gene ID=3065] by RNAi. www.broad.mit.e...
Broad BUYTAERT_PHOTODYNAMIC_THERAPY_STRESS_UP View Gene Set 3.034e-17 783 2.199e-15 33 Genes up-regulated in T24 (bladder cancer) cells in response to the photodynamic therapy (PDT) stress. www.broad.mit.e...
Broad CHARAFE_BREAST_CANCER_LUMINAL_VS_MESENCHYMAL_DN View Gene Set 3.495e-17 444 2.459e-15 34 Genes down-regulated in luminal-like breast cancer cell lines compared to the mesenchymal-like ones. www.broad.mit.e...
Broad FOURNIER_ACINAR_DEVELOPMENT_LATE_2 View Gene Set 6.08e-17 265 4.155e-15 35 Genes identified by method 2 as coordinately down-regulated late in HMEC cells (mammary epithelium) during acinar development in vitro. www.broad.mit.e...
Broad BORCZUK_MALIGNANT_MESOTHELIOMA_UP View Gene Set 2.245e-16 290 1.492e-14 36 Genes up-regulated in biphasic (mixed) vs epithelial subtypes of malignant peritoneal mesothelioma. www.broad.mit.e...
Broad RODRIGUES_THYROID_CARCINOMA_ANAPLASTIC_UP View Gene Set 4.621e-16 681 2.988e-14 37 Genes up-regulated in anaplastic thyroid carcinoma (ATC) compared to normal thyroid tissue. www.broad.mit.e...
Broad KRIGE_RESPONSE_TO_TOSEDOSTAT_24HR_UP View Gene Set 8.004e-16 716 5.039e-14 38 Genes up-regulated in HL-60 cells (acute promyelocytic leukemia APL) after treatment with the aminopeptidase inhibitor tosedostat (CHR-2797) [PubChem=15547703] for 24 h. www.broad.mit.e...
Broad FLECHNER_BIOPSY_KIDNEY_TRANSPLANT_OK_VS_DONOR_UP View Gene Set 1.062e-15 532 6.514e-14 39 Genes diffierentially expressed in kidney biopsies from patients with well functioning kidneys more than 1-year post transplant compared to the biopsies from normal living kidney donors. www.broad.mit.e...
Broad SHEDDEN_LUNG_CANCER_POOR_SURVIVAL_A6 View Gene Set 1.728e-15 435 1.033e-13 40 Cluster 6 of method A: up-regulation of these genes in patients with non???small cell lung cancer (NSCLC) predicts poor survival outcome. www.broad.mit.e...
Broad REN_ALVEOLAR_RHABDOMYOSARCOMA_DN View Gene Set 2.081e-15 402 1.214e-13 41 Genes commonly down-regulated in human alveolar rhabdomyosarcoma (ARMS) and its mouse model overexpressing PAX3-FOXO1 [Gene ID=5077 2308] fusion. www.broad.mit.e...
Broad CREIGHTON_ENDOCRINE_THERAPY_RESISTANCE_5 View Gene Set 2.974e-15 446 1.694e-13 42 The 'group 5 set' of genes associated with acquired endocrine therapy resistance in breast tumors expressing ESR1 but not ERBB2 [Gene ID=2099 2064]. www.broad.mit.e...
Broad STEIN_ESRRA_TARGETS View Gene Set 3.749e-15 508 2.085e-13 43 Genes regulated by ESRRA [Gene ID=2101] in MCF-7 cells (breast cancer). www.broad.mit.e...
Broad MUELLER_PLURINET View Gene Set 6.571e-15 294 3.572e-13 44 Genes constituting the PluriNet protein-protein network shared by the pluripotent cells (embryonic stem cells embryonical carcinomas and induced pluripotent cells). www.broad.mit.e...
Broad MOOTHA_HUMAN_MITODB_6_2002 View Gene Set 1.297e-14 420 6.892e-13 45 Mitochondrial genes; based on literature and sequence annotation resources and converted to Affymetrix HG-U133A probe sets. www.broad.mit.e...
Broad NAKAMURA_TUMOR_ZONE_PERIPHERAL_VS_CENTRAL_UP View Gene Set 1.354e-14 263 7.039e-13 46 Up-regulated genes in peripheral zone of human pancreatic cancer growing in the pancreas of nude mice compared to that of the tumor from the central zone. www.broad.mit.e...
Broad VECCHI_GASTRIC_CANCER_EARLY_UP View Gene Set 1.532e-14 408 7.477e-13 47 Up-regulated genes distinguishing between early gastric cancer (EGC) and normal tissue samples. www.broad.mit.e...
Broad DACOSTA_UV_RESPONSE_VIA_ERCC3_DN View Gene Set 1.473e-14 825 7.477e-13 47 Genes down-regulated in fibroblasts expressing mutant forms of ERCC3 [Gene ID=2071] after UV irradiation. www.broad.mit.e...
Broad WONG_EMBRYONIC_STEM_CELL_CORE View Gene Set 1.517e-14 331 7.477e-13 47 The 'core ESC-like gene module': genes coordinately up-regulated in a compendium of mouse embryonic stem cells (ESC) which are shared with the human ESC-like module. www.broad.mit.e...
Broad WANG_SMARCE1_TARGETS_DN View Gene Set 1.74e-14 329 8.326e-13 50 Genes down-regulated in BT549 cells (breast cancer) by expression of SMARCE1 [Gene ID=6605] off a retroviral vector. www.broad.mit.e...
Broad MOOTHA_MITOCHONDRIA View Gene Set 3.141e-14 433 1.473e-12 51 Mitochondrial genes www.broad.mit.e...
Broad BILD_HRAS_ONCOGENIC_SIGNATURE View Gene Set 3.328e-14 248 1.531e-12 52 Genes selected in supervised analyses to discriminate cells expressing activated HRAS [Gene ID=3265] oncogene from control cells expressing GFP. www.broad.mit.e...
Broad SPIELMAN_LYMPHOBLAST_EUROPEAN_VS_ASIAN_DN View Gene Set 4.694e-14 571 2.119e-12 53 Genes down-regulated in lymphoblastoid cells from the European population compared to those from the Asian population. www.broad.mit.e...
Broad ONDER_CDH1_TARGETS_2_DN View Gene Set 4.895e-14 453 2.168e-12 54 Genes down-regulated in HMLE cells (immortalized nontransformed mammary epithelium) after E-cadhedrin (CDH1) [Gene ID=999] knockdown by RNAi. www.broad.mit.e...
Broad MONNIER_POSTRADIATION_TUMOR_ESCAPE_DN View Gene Set 5.286e-14 317 2.299e-12 55 The postradiation tumor escape signature: genes down-regulated in tumors from irradiated stroma vs those from non-irradiated stroma. www.broad.mit.e...
Broad KOBAYASHI_EGFR_SIGNALING_24HR_DN View Gene Set 6.162e-14 243 2.632e-12 56 Genes down-regulated in H1975 cells (non-small cell lung cancer NSCLC) resistant to gefitinib [PubChem=123631] after treatment with EGFR inhibitor CL-387785 [PubChem=2776] for 24h. www.broad.mit.e...
Broad HSIAO_HOUSEKEEPING_GENES View Gene Set 7.637e-14 384 3.205e-12 57 Housekeeping genes identified as expressed across 19 normal tissues. www.broad.mit.e...
Broad COLDREN_GEFITINIB_RESISTANCE_DN View Gene Set 7.86e-14 217 3.241e-12 58 Genes down-regulated in NSCLC (non-small cell lung carcinoma) cell lines resistant to gefitinib [PubChem=123631] compared to the sensitive ones. www.broad.mit.e...
Broad GRUETZMANN_PANCREATIC_CANCER_UP View Gene Set 8.856e-14 345 3.59e-12 59 Genes up-regulated in pancreatic ductal adenocarcinoma (PDAC) identified in a meta analysis across four independent studies. www.broad.mit.e...
Broad ENK_UV_RESPONSE_KERATINOCYTE_DN View Gene Set 2.078e-13 475 8.284e-12 60 Genes down-regulated in NHEK cells (normal epidermal keratinocytes) after UVB irradiation. www.broad.mit.e...
Broad BENPORATH_MYC_MAX_TARGETS View Gene Set 2.113e-13 768 8.285e-12 61 Set 'Myc targets2': targets of c-Myc [Gene ID=4609] and Max [Gene ID=4149] identified by ChIP on chip in a Burkitt???s lymphoma cell line; overlap set. www.broad.mit.e...
Broad BENPORATH_CYCLING_GENES View Gene Set 3.014e-13 630 1.163e-11 62 Genes showing cell-cycle stage-specific expression [PMID=12058064]. www.broad.mit.e...
Broad GEORGES_TARGETS_OF_MIR192_AND_MIR215 View Gene Set 3.417e-13 809 1.297e-11 63 Genes down-regulated in HCT116 cells (colon cancer) by expression of MIR192 or MIR215 [Gene ID=406967 406997] at 24 h. www.broad.mit.e...
Broad ALONSO_METASTASIS_UP View Gene Set 3.534e-13 152 1.321e-11 64 Up-regulated genes in melanoma tumous that developed metastatic disease compared to primary melanoma that did not. www.broad.mit.e...
Broad KIM_WT1_TARGETS_DN View Gene Set 3.609e-13 431 1.328e-11 65 Genes down-regulated in UB27 cells (osteosarcoma) at any time point after inducing the expression of a mutant form of WT1 [Gene ID=7490]. www.broad.mit.e...
Broad SCHLOSSER_SERUM_RESPONSE_DN View Gene Set 4.557e-13 666 1.652e-11 66 Cluster 4: genes down-regulated in B493-6 cells (B lymphocytes) upon serum stimulation but not affected by MYC [Gene ID=4609]. www.broad.mit.e...
Broad ENK_UV_RESPONSE_KERATINOCYTE_UP View Gene Set 5.345e-13 517 1.908e-11 67 Genes up-regulated in NHEK cells (normal epidermal keratinocytes) after UVB irradiation. www.broad.mit.e...
Broad HAN_SATB1_TARGETS_DN View Gene Set 7.755e-13 320 2.728e-11 68 Genes down-regulated in MDA-MB-231 cells (breast cancer) after knockdown of SATB1 [Gene ID=6304] by RNAi. www.broad.mit.e...
Broad FULCHER_INFLAMMATORY_RESPONSE_LECTIN_VS_LPS_UP View Gene Set 1.146e-12 539 3.972e-11 69 Genes up-regulated in monocyte-derived dendritic cells (MDDC) after stimulation with galecin-1 (lectin LGALS1) [Gene ID=3956] compared to that with bacterial lipopolysaccharide (LPS). www.broad.mit.e...
Broad STARK_PREFRONTAL_CORTEX_22Q11_DELETION_DN View Gene Set 3.176e-12 437 1.085e-10 70 Genes down-regulated in prefrontal cortex (PFC) of mice carrying a hemizygotic microdeletion in the 22q11.2 region. www.broad.mit.e...
Broad SPIELMAN_LYMPHOBLAST_EUROPEAN_VS_ASIAN_UP View Gene Set 4.035e-12 469 1.359e-10 71 Genes up-regulated in lymphoblastoid cells from the European population compared to those from the Asian population. www.broad.mit.e...
Broad HAMAI_APOPTOSIS_VIA_TRAIL_UP View Gene Set 4.948e-12 328 1.644e-10 72 Genes up-regulated in T1 cells (primary melanoma sensitive to TRAIL [Gene ID=8743]) compared to G1 cells (metastatic melanoma resistant to TRAIL). www.broad.mit.e...
Broad BENPORATH_SOX2_TARGETS View Gene Set 5.615e-12 704 1.84e-10 73 Set 'Sox2 targets': genes upregulated and identified by ChIP on chip as SOX2 [Gene ID=6657] transcription factor targets in human embryonic stem cells. www.broad.mit.e...
Broad MOOTHA_PGC View Gene Set 9.087e-12 329 2.937e-10 74 Genes up-regulated in differentiating C2C12 cells (myoblasts) upon expression of PPARGC1A [Gene ID=10891] off an adenoviral vector. www.broad.mit.e...
Broad DEBIASI_APOPTOSIS_BY_REOVIRUS_INFECTION_UP View Gene Set 9.761e-12 242 3.113e-10 75 Genes up-regulated in HEK293 cells (embryonic kidney) at 6 h 12 h or 24 h after infection with reovirus strain T3A (known as a strong inducer of apoptosis). www.broad.mit.e...
Broad GRADE_COLON_CANCER_UP View Gene Set 1.219e-11 711 3.836e-10 76 Up-regulated genes in colon carcinoma tumors compared to the matched normal mucosa samples. www.broad.mit.e...
Broad SCHUHMACHER_MYC_TARGETS_UP View Gene Set 1.271e-11 68 3.949e-10 77 Genes up-regulated in P493-6 cells (Burkitt's lymphoma) induced to express MYC [Gene ID=4609]. www.broad.mit.e...
Broad LANDIS_ERBB2_BREAST_TUMORS_324_UP View Gene Set 1.3e-11 132 3.986e-10 78 The 324 genes identified by two analytical methods as changed in the mammary tumors induced by transgenic expression of ERBB2 [Gene ID=2064]. www.broad.mit.e...
Broad STEIN_ESRRA_TARGETS_UP View Gene Set 1.61e-11 368 4.874e-10 79 Genes up-regulated by ESRRA [Gene ID=2101] only. www.broad.mit.e...
Broad BENPORATH_ES_1 View Gene Set 2.285e-11 367 6.831e-10 80 Set 'ES exp1': genes overexpressed in human embryonic stem cells according to 5 or more out of 20 profiling studies. www.broad.mit.e...
Broad HAN_SATB1_TARGETS_UP View Gene Set 4.038e-11 303 1.192e-09 81 Genes up-regulated in MDA-MB-231 cells (breast cancer) after knockdown of SATB1 [Gene ID=6304] by RNAi. www.broad.mit.e...
Broad SHEN_SMARCA2_TARGETS_UP View Gene Set 5.665e-11 406 1.652e-09 82 Genes whose expression positively correlated with that of SMARCA2 [Gene ID=6595] in prostate cancer samples. www.broad.mit.e...
Broad SWEET_LUNG_CANCER_KRAS_UP View Gene Set 7.487e-11 436 2.158e-09 83 Genes up-regulated in the mouse lung cancer model with mutated KRAS [Gene ID=3845]. www.broad.mit.e...
Broad GRADE_COLON_AND_RECTAL_CANCER_UP View Gene Set 8.673e-11 213 2.47e-09 84 Up-regulated genes in both rectal and colon carcinoma compared to normal mucosa samples. www.broad.mit.e...
Broad YAO_TEMPORAL_RESPONSE_TO_PROGESTERONE_CLUSTER_17 View Gene Set 9.046e-11 165 2.546e-09 85 Genes co-regulated in uterus during a time course response to progesterone [PubChem=5994]: SOM cluster 17. www.broad.mit.e...
Broad SENESE_HDAC3_TARGETS_UP View Gene Set 9.992e-11 471 2.779e-09 86 Genes up-regulated in U2OS cells (osteosarcoma) upon knockdown of HDAC3 [Gene ID=8841] by RNAi. www.broad.mit.e...
Broad HORIUCHI_WTAP_TARGETS_DN View Gene Set 1.072e-10 289 2.948e-09 87 Genes down-regulated in primary endothelial cells (HUVEC) after knockdown of WTAP [Gene ID=9589] by RNAi. www.broad.mit.e...
Broad LAIHO_COLORECTAL_CANCER_SERRATED_UP View Gene Set 1.228e-10 108 3.337e-09 88 Genes up-regulated in serrated vs conventional colorectal carcinoma (CRC) samples. www.broad.mit.e...
Broad ONKEN_UVEAL_MELANOMA_DN View Gene Set 1.284e-10 509 3.45e-09 89 Genes down-regulated in uveal melanoma: class 2 vs class 1 tumors. www.broad.mit.e...
Broad BLALOCK_ALZHEIMERS_DISEASE_UP View Gene Set 1.935e-10 1641 5.142e-09 90 Genes up-regulated in brain from patients with Alzheimer's disease. www.broad.mit.e...
Broad CREIGHTON_ENDOCRINE_THERAPY_RESISTANCE_3 View Gene Set 1.978e-10 681 5.2e-09 91 The 'group 3 set' of genes associated with acquired endocrine therapy resistance in breast tumors expressing ESR1 and ERBB2 [Gene ID=2099 2064]. www.broad.mit.e...
Broad HUPER_BREAST_BASAL_VS_LUMINAL_DN View Gene Set 2.3e-10 59 5.981e-09 92 Genes down-regulated in basal mammary epithelial cells compared to the luminal ones. www.broad.mit.e...
Broad WAMUNYOKOLI_OVARIAN_CANCER_LMP_UP View Gene Set 2.674e-10 244 6.877e-09 93 Genes up-regulated in mucinous ovarian carcinoma tumors of low malignant potential (LMP) compared to normal ovarian surface epithelium tissue. www.broad.mit.e...
Broad VANTVEER_BREAST_CANCER_ESR1_DN View Gene Set 3.058e-10 217 7.782e-09 94 Down-regulated genes from the optimal set of 550 markers discriminating breast cancer samples by ESR1 [Gene ID=2099] expression: ER(+) vs ER(-) tumors. www.broad.mit.e...
Broad ENK_UV_RESPONSE_EPIDERMIS_DN View Gene Set 3.528e-10 504 8.884e-09 95 Genes down-regulated in epidermis after to UVB irradiation. www.broad.mit.e...
Broad BASAKI_YBX1_TARGETS_UP View Gene Set 3.762e-10 279 9.375e-09 96 Genes up-regulated in SKOC-3 cells (ovarian cancer) after YB-1 (YBX1) [Gene ID=4904] knockdown by RNAi. www.broad.mit.e...
Broad MONNIER_POSTRADIATION_TUMOR_ESCAPE_UP View Gene Set 4.282e-10 359 1.056e-08 97 The postradiation tumor escape signature: genes up-regulated in tumors from irradiated stroma vs those from non-irradiated stroma. www.broad.mit.e...
Broad NAKAMURA_TUMOR_ZONE_PERIPHERAL_VS_CENTRAL_DN View Gene Set 5.269e-10 583 1.286e-08 98 Down-regulated genes in peripheral zone of human pancreatic cancer growing in the pancreas of nude mice compared to that of the tumor from the central zone. www.broad.mit.e...
Broad HUANG_DASATINIB_RESISTANCE_UP View Gene Set 7.345e-10 75 1.775e-08 99 Genes whose expression positively correlated with sensitivity of breast cancer cell lines to dasatinib [PubChem=3062316]. www.broad.mit.e...
Broad SHAFFER_IRF4_TARGETS_IN_MYELOMA_VS_MATURE_B_LYMPHOCYTE View Gene Set 9.845e-10 95 2.355e-08 100 IRF4 [Gene ID=3662] target genes up-regulated in primary myeloma vs. mature B lymphocytes. www.broad.mit.e...
Broad BLUM_RESPONSE_TO_SALIRASIB_UP View Gene Set 1.003e-09 240 2.376e-08 101 Selected genes up-regulated in response to the Ras inhibitor salirasib [PubChem=5469318] in a panel of cancer cell lines with constantly active HRAS [Gene ID=3265]. www.broad.mit.e...
Broad MASSARWEH_TAMOXIFEN_RESISTANCE_UP View Gene Set 1.086e-09 531 2.548e-08 102 Genes up-regulated in breast cancer tumors (formed by MCF-7 xenografts) resistant to tamoxifen [PubChem=5376]. www.broad.mit.e...
Broad LINDGREN_BLADDER_CANCER_CLUSTER_3_UP View Gene Set 1.102e-09 314 2.559e-08 103 Genes whose expression profile is specific to Cluster III of urothelial cell carcinoma (UCC) tumors. www.broad.mit.e...
Broad WINTER_HYPOXIA_METAGENE View Gene Set 1.185e-09 216 2.725e-08 104 Genes regulated by hypoxia based on literature searches. www.broad.mit.e...
Broad RUTELLA_RESPONSE_TO_HGF_UP View Gene Set 1.275e-09 409 2.906e-08 105 Genes up-regulated in peripheral blood monocytes by HGF [Gene ID=3082]. www.broad.mit.e...
Broad MILI_PSEUDOPODIA_HAPTOTAXIS_UP View Gene Set 1.426e-09 452 3.217e-08 106 Transcripts enriched in pseudopodia of NIH/3T3 cells (fibroblast) in response to haptotactic migratory stimulus by fibronectin FN1 [Gene ID=2335]. www.broad.mit.e...
Broad BERENJENO_TRANSFORMED_BY_RHOA_DN View Gene Set 1.487e-09 353 3.323e-08 107 Genes down-regulated in NIH3T3 cells (fibroblasts) transformed by expression of contitutively active (Q63L) form of RHOA [Gene ID=387] off plasmid vector. www.broad.mit.e...
Broad BOYAULT_LIVER_CANCER_SUBCLASS_G3_UP View Gene Set 1.62e-09 184 3.588e-08 108 Up-regulated genes in hepatocellular carcinoma (HCC) subclass G3 defined by unsupervised clustering. www.broad.mit.e...
Broad FLECHNER_BIOPSY_KIDNEY_TRANSPLANT_REJECTED_VS_OK_DN View Gene Set 1.909e-09 532 4.19e-08 109 Genes differentially expressed in kidney biopsies from patients with acute transplant rejection compared to the biopsies from patients with well functioning kidneys more than 1-year post transplant. www.broad.mit.e...
Broad CREIGHTON_ENDOCRINE_THERAPY_RESISTANCE_1 View Gene Set 2.032e-09 491 4.418e-08 110 The 'group 1 set' of genes associated with acquired endocrine therapy resistance in breast tumors expressing ESR1 and ERBB2 [Gene ID=2099 2064]. www.broad.mit.e...
Broad PODAR_RESPONSE_TO_ADAPHOSTIN_UP View Gene Set 2.052e-09 140 4.423e-08 111 Up-regulated genes in MM1.S cells (multiple myeloma) treated with adaphostin [PubChem=387042] a tyrosine kinase inhibitor with anticancer properties. www.broad.mit.e...
Broad WANG_CLIM2_TARGETS_DN View Gene Set 2.131e-09 166 4.551e-08 112 Genes down-regulated in MCF7 cells (breast cancer) engineered to conditionally express a dominant negative form of CLIM2 [Gene ID=8861] by a Tet Off system. www.broad.mit.e...
Broad ONDER_CDH1_TARGETS_1_DN View Gene Set 2.28e-09 161 4.827e-08 113 Genes down-regulated in HMLE cells (mmortalized nontransformed mammary epithelial) by expression of a dominant-negative form of E-cadhedrin (CDH1) [Gene ID=999]. www.broad.mit.e...
Broad MOHANKUMAR_TLX1_TARGETS_UP View Gene Set 2.395e-09 388 5.025e-08 114 Up-regulated in MCF7 cells (breast cancer) by TLX1 (HOX11) [Gene ID=3195]. www.broad.mit.e...
Broad TIEN_INTESTINE_PROBIOTICS_6HR_DN View Gene Set 2.526e-09 160 5.255e-08 115 Genes down-regulated in Caco-2 cells (intestinal epithelium) after coculture with the probiotic bacteria L. casei for 6h. www.broad.mit.e...
Broad LIAO_METASTASIS View Gene Set 2.776e-09 513 5.724e-08 116 Genes up-regulated in the samples with intrahepatic metastatic hepatocellular carcinoma (HCC) vs primary HCC. www.broad.mit.e...
Broad MISSIAGLIA_REGULATED_BY_METHYLATION_DN View Gene Set 3.888e-09 96 7.949e-08 117 Genes down-regulated in PaCa44 and CFPAC1 cells (pancreatic cancer) after treatment with decitabine [PubChem=451668] a DNA hypomethylating agent similar to azacitidine [PubChem=9444]. www.broad.mit.e...
Broad ZHANG_RESPONSE_TO_IKK_INHIBITOR_AND_TNF_UP View Gene Set 5.977e-09 208 1.201e-07 118 Genes up-regulated in BxPC3 cells (pancreatic cancer) after treatment with TNF [Gene ID=7124] or IKI-1 an inhibitor of I?B kinase (IKK). www.broad.mit.e...
Broad BLUM_RESPONSE_TO_SALIRASIB_DN View Gene Set 5.952e-09 332 1.201e-07 118 Selected genes down-regulated in response to the Ras inhibitor salirasib [PubChem=5469318] in a panel of cancer cell lines with constantly active HRAS [Gene ID=3265]. www.broad.mit.e...
Broad WANG_LMO4_TARGETS_UP View Gene Set 6.088e-09 341 1.213e-07 120 Genes up-regulated in MCF7 cells (breast cancer) engineered to conditionally express LMO4 [Gene ID=8543] by a Tet Off system. www.broad.mit.e...
Broad RUIZ_TNC_TARGETS_DN View Gene Set 6.646e-09 138 1.314e-07 121 Genes down-regulated in T98G cells (glioblastoma) by TNC [Gene ID=3371]. www.broad.mit.e...
Broad BYSTRYKH_HEMATOPOIESIS_STEM_CELL_QTL_CIS View Gene Set 7.307e-09 118 1.433e-07 122 Transcripts in hematopoietic stem cells (HSC) which are cis-regulated (i.e. modulated by a QTL (quantitative trait locus) in close proximity to the gene). www.broad.mit.e...
Broad ELVIDGE_HYPOXIA_BY_DMOG_UP View Gene Set 7.824e-09 125 1.522e-07 123 Genes up-regulated in MCF7 cells (breast cancer) treated with hypoxia mimetic DMOG [PubChem=3080614]. www.broad.mit.e...
Broad TONKS_TARGETS_OF_RUNX1_RUNX1T1_FUSION_MONOCYTE_UP View Gene Set 8.383e-09 195 1.617e-07 124 Genes up-regulated in monocytes by RUNX1-RUNX1T1 [Gene ID=861 862] fusion. www.broad.mit.e...
Broad MISSIAGLIA_REGULATED_BY_METHYLATION_UP View Gene Set 9.212e-09 99 1.763e-07 125 Genes up-regulated in PaCa44 and CFPAC1 cells (pancreatic cancer) after treatment with decitabine [PubChem=451668] a DNA hypomethylating agent similar to azacitidine [PubChem=9444]. www.broad.mit.e...
Broad SHEPARD_CRUSH_AND_BURN_MUTANT_UP View Gene Set 1.224e-08 135 2.325e-07 126 Human orthologs of genes up-regulated in the crb ('crash and burn') zebrafish mutant that represents a loss-of-function mutation in BMYB [Gene ID=4605]. www.broad.mit.e...
Broad HELLER_HDAC_TARGETS_SILENCED_BY_METHYLATION_UP View Gene Set 1.266e-08 399 2.384e-07 127 Genes up-regulated in multiple myeloma (MM) cell lines treated with both decitabine [PubChem=451668] TSA [PubChem=5562]. www.broad.mit.e...
Broad HOLLMAN_APOPTOSIS_VIA_CD40_UP View Gene Set 1.293e-08 193 2.416e-07 128 Genes up-regulated in DLBCL (diffuse large B-cell lymphoma) cell lines sensitive to stimulation of CD40 [Gene ID=958] relative to the resistant ones. www.broad.mit.e...
Broad NELSON_RESPONSE_TO_ANDROGEN_UP View Gene Set 1.533e-08 81 2.842e-07 129 Genes up-regulated in LNCaP cells (prostate cancer) in response to synthetic androgen R1881 [PubChem=13766]. www.broad.mit.e...
Broad WONG_MITOCHONDRIA_GENE_MODULE View Gene Set 1.626e-08 208 2.991e-07 130 Genes that comprise the mitochondria gene module www.broad.mit.e...
Broad LOPEZ_MBD_TARGETS View Gene Set 1.827e-08 855 3.335e-07 131 Genes up-regulated in HeLa cells (cervical cancer) after simultaneus knockdown of all three MBD (methyl-CpG binding domain) proteins MeCP2 MBD1 and MBD2 [Gene ID=4204 4152 8932] by RNAi. www.broad.mit.e...
Broad WELCSH_BRCA1_TARGETS_1_UP View Gene Set 1.925e-08 171 3.481e-07 132 Upregulated by induction of exogenous BRCA1 in EcR-293 cells www.broad.mit.e...
Broad YAO_TEMPORAL_RESPONSE_TO_PROGESTERONE_CLUSTER_13 View Gene Set 1.936e-08 158 3.481e-07 132 Genes co-regulated in uterus during a time course response to progesterone [PubChem=5994]: SOM cluster 13. www.broad.mit.e...
Broad LU_AGING_BRAIN_DN View Gene Set 1.952e-08 255 3.485e-07 134 Genes down-regulated in postmortem brain frontal cortex samples from old subjects compared to those from the young ones. www.broad.mit.e...
Broad HELLER_HDAC_TARGETS_UP View Gene Set 2.082e-08 268 3.69e-07 135 Genes up-regulated in at least one of three multiple myeloma (MM) cell lines by TSA [PubChem=5562]. www.broad.mit.e...
Broad ELVIDGE_HYPOXIA_UP View Gene Set 2.141e-08 163 3.766e-07 136 Genes up-regulated in MCF7 cells (breast cancer) under hypoxia conditions. www.broad.mit.e...
Broad YAO_TEMPORAL_RESPONSE_TO_PROGESTERONE_CLUSTER_11 View Gene Set 2.265e-08 93 3.955e-07 137 Genes co-regulated in uterus during a time course response to progesterone [PubChem=5994]: SOM cluster 11. www.broad.mit.e...
Broad JIANG_HYPOXIA_NORMAL View Gene Set 2.772e-08 213 4.805e-07 138 Genes up-regulated in RPTEC cells (normal kidney) by hypoxia. www.broad.mit.e...
Broad RAMALHO_STEMNESS_UP View Gene Set 3.17e-08 192 5.455e-07 139 Genes enriched in embryonic neural and hematopoietic stem cells. www.broad.mit.e...
Broad TOYOTA_TARGETS_OF_MIR34B_AND_MIR34C View Gene Set 3.513e-08 436 6.002e-07 140 Genes down-regulated in HCT116 cells (colon cancer) upon expression of MIR34B or MIR34C [Gene ID=407041 407042] microRNAs. www.broad.mit.e...
Broad FARMER_BREAST_CANCER_APOCRINE_VS_BASAL View Gene Set 3.642e-08 321 6.135e-07 141 Genes which best discriminate between two groups of breast cancer according the status of ESR1 and AR [Gene ID=2099 367]: apocrine (ESR1- AR+) vs basal (ESR1- AR-). www.broad.mit.e...
Broad PAL_PRMT5_TARGETS_UP View Gene Set 3.627e-08 178 6.135e-07 141 Genes up-regulated in NIH-3T3 cells (fibroblast) after knockdown of PRMT5 [Gene ID=10419] by RNAi. www.broad.mit.e...
Broad MARTINEZ_RESPONSE_TO_TRABECTEDIN_DN View Gene Set 3.755e-08 212 6.282e-07 143 Genes down-regulated in at least 8 of 11 sarcoma cell lines by trabectedin [PubChem=3199]. www.broad.mit.e...
Broad OSMAN_BLADDER_CANCER_UP View Gene Set 4.427e-08 387 7.354e-07 144 Genes up-regulated in blood samples from bladder cancer patients. www.broad.mit.e...
Broad PUJANA_ATM_PCC_NETWORK View Gene Set 4.497e-08 1375 7.418e-07 145 Genes constituting the ATM-PCC network of transcripts whose expression positively correlated (Pearson correlation coefficient PCC >= 0.4) with that of ATM [Gene ID=472] across a compendium of normal tissues. www.broad.mit.e...
Broad WELCSH_BRCA1_TARGETS_1_DN View Gene Set 5.061e-08 124 8.292e-07 146 Upregulated by induction of exogenous BRCA1 in EcR-293 cells www.broad.mit.e...
Broad DACOSTA_UV_RESPONSE_VIA_ERCC3_COMMON_DN View Gene Set 5.213e-08 418 8.483e-07 147 Common down-regulated transcripts in fibroblasts expressing either XP/CS or TDD mutant forms of ERCC3 [Gene ID=2071] after UVC irradiation. www.broad.mit.e...
Broad MILI_PSEUDOPODIA_HAPTOTAXIS_DN View Gene Set 6.284e-08 607 1.016e-06 148 Transcripts depleted from pseudopodia of NIH/3T3 cells (fibroblast) in response to haptotactic migratory stimulus by fibronectin FN1 [Gene ID=2335]. www.broad.mit.e...
Broad OSMAN_BLADDER_CANCER_DN View Gene Set 6.352e-08 358 1.02e-06 149 Genes down-regulated in blood samples from bladder cancer patients. www.broad.mit.e...
Broad LIU_CMYB_TARGETS_UP View Gene Set 6.54e-08 158 1.043e-06 150 Genes up-regulated in MCF-7 cells (breast cancer) by overexpression of CMYB [Gene ID=4602] off adenovirus vector. www.broad.mit.e...
Broad KIM_WT1_TARGETS_12HR_DN View Gene Set 6.767e-08 200 1.072e-06 151 Genes down-regulated in UB27 cells (osteosarcoma) at 12 hr after inducing the expression of a mutated form of WT1 [Gene ID=7490]. www.broad.mit.e...
Broad ENK_UV_RESPONSE_EPIDERMIS_UP View Gene Set 6.886e-08 283 1.084e-06 152 Genes up-regulated in epidermis after to UVB irradiation. www.broad.mit.e...
Broad TONKS_TARGETS_OF_RUNX1_RUNX1T1_FUSION_HSC_UP View Gene Set 7.267e-08 182 1.136e-06 153 Genes up-regulated in normal hematopoietic progenitors by RUNX1-RUNX1T1 [Gene ID=861 862] fusion. www.broad.mit.e...
Broad SCHLOSSER_MYC_TARGETS_AND_SERUM_RESPONSE_DN View Gene Set 9.625e-08 46 1.491e-06 154 Cluster 6: genes down-regulated in B493-6 cells (B lymphocytes) by MYC [Gene ID=4609] in combination with serum but not affected by serum alone; they are also up-regulated by MYC alone. www.broad.mit.e...
Broad DAIRKEE_TERT_TARGETS_UP View Gene Set 9.661e-08 317 1.491e-06 154 Genes up-regulated in non-spontaneously immortalizing (NSI) primary breast cancer tumor cultures upon expression of TERT [Gene ID=7015] off a retroviral vector. www.broad.mit.e...
Broad LIU_SOX4_TARGETS_DN View Gene Set 1.003e-07 297 1.538e-06 156 Genes down-regulated in LNCaP cells (prostate cancer) by overexpression of SOX4 [Gene ID=6659] and up-regulated by its RNAi knockdown. www.broad.mit.e...
Broad PUJANA_BRCA2_PCC_NETWORK View Gene Set 1.057e-07 410 1.611e-06 157 Genes constituting the BRCA2-PCC network of transcripts whose expression positively correlated (Pearson correlation coefficient PCC >= 0.4) with that of BRCA2 [Gene ID=675] across a compendium of normal tissues. www.broad.mit.e...
Broad KIM_WT1_TARGETS_UP View Gene Set 1.093e-07 207 1.625e-06 158 Genes up-regulated in UB27 cells (osteosarcoma) at any time point after inducing the expression of a mutant form of WT1 [Gene ID=7490]. www.broad.mit.e...
Broad SMITH_TERT_TARGETS_UP View Gene Set 1.094e-07 128 1.625e-06 158 Genes consistently up-regulated in HMEC cells (primary mammary epithelium) upon expression of TERT [Gene ID=7015] off a retroviral vector. www.broad.mit.e...
Broad RUTELLA_RESPONSE_TO_CSF2RB_AND_IL4_UP View Gene Set 1.082e-07 331 1.625e-06 158 Genes up-regulated in peripheral blood monocytes by CSF2RB (GM-CSF) [Gene ID=1437] and IL4 [Gene ID=3565]. www.broad.mit.e...
Broad SHAFFER_IRF4_TARGETS_IN_PLASMA_CELL_VS_MATURE_B_LYMPHOCYTE View Gene Set 1.082e-07 65 1.625e-06 158 IRF4 [Gene ID=3662] target genes up-regulated in plasma cells compared to mature B lymphocytes. www.broad.mit.e...
Broad GOLDRATH_HOMEOSTATIC_PROLIFERATION View Gene Set 1.166e-07 154 1.721e-06 162 Up-regulated in CD8+ [Gene ID=925] T lymphocytes undergoing homeostatic proliferation (HP) versus the naive cells; these genes are not up-regulated versus effector or memory cell population. www.broad.mit.e...
Broad KAN_RESPONSE_TO_ARSENIC_TRIOXIDE View Gene Set 1.331e-07 117 1.954e-06 163 Genes changed in U373-MG cells (malignant glioma) upon treatment with arsenic trioxide [PubChem=14888] a chemical that can cause autophagic cell death. www.broad.mit.e...
Broad LIEN_BREAST_CARCINOMA_METAPLASTIC_VS_DUCTAL_UP View Gene Set 1.405e-07 79 2.049e-06 164 Genes up-regulated between two breast carcinoma subtypes: metaplastic (MCB) and ductal (DCB). www.broad.mit.e...
Broad GOLDRATH_ANTIGEN_RESPONSE View Gene Set 1.414e-07 315 2.049e-06 164 Genes up-regulated at the peak of an antigen response of naive CD8+ [Gene ID=925 926] T-cells. www.broad.mit.e...
Broad HOLLMAN_APOPTOSIS_VIA_CD40_DN View Gene Set 1.517e-07 255 2.185e-06 166 Genes down-regulated in DLBCL (diffuse large B-cell lymphoma) cell lines sensitive to stimulation of CD40 [Gene ID=958] relative to the resistant ones. www.broad.mit.e...
Broad TOOKER_GEMCITABINE_RESISTANCE_DN View Gene Set 1.573e-07 122 2.24e-06 167 Down-regulated genes in Calu3 cells (non-small cell lung cancer NSCLC) resistant to gemcitabine [PubChem=3461] compared to the parental line sensitive to the drug. www.broad.mit.e...
Broad TOOKER_RESPONSE_TO_BEXAROTENE_UP View Gene Set 1.573e-07 122 2.24e-06 167 Up-regulated genes in Calu3 cells (non-small lung cancer cells NSCLC) resitant to gemcitabine [PubChem=3461] in response to bexarotene [PubChem=82146]. www.broad.mit.e...
Broad LIU_VMYB_TARGETS_UP View Gene Set 1.615e-07 121 2.286e-06 169 Genes up-regulated in MCF-7 cells (breast cancer) by overexpression of v-MYB oncogenic varian of CMYB [Gene ID=4602] off adenovirus vector. www.broad.mit.e...
Broad PUIFFE_INVASION_INHIBITED_BY_ASCITES_UP View Gene Set 1.672e-07 78 2.353e-06 170 Genes up-regulated in OV-90 cells (ovarian cancer) exposed to ascites which inhibited invasion. www.broad.mit.e...
Broad LANDIS_BREAST_CANCER_PROGRESSION_UP View Gene Set 1.758e-07 42 2.458e-06 171 Genes up-regulated in preneoplastic mammary tissues and whose expression is maintained in tumors. www.broad.mit.e...
Broad AIGNER_ZEB1_TARGETS View Gene Set 1.838e-07 29 2.527e-06 172 Genes up-regulated in MDA-MB-231 cells (breast cancer) after knockdown of ZEB1 [Gene ID=6935] by RNAi. www.broad.mit.e...
Broad DACOSTA_UV_RESPONSE_VIA_ERCC3_UP View Gene Set 1.826e-07 301 2.527e-06 172 Genes up-regulated in fibroblasts expressing mutant forms of ERCC3 [Gene ID=2071] after UV irradiation. www.broad.mit.e...
Broad RUTELLA_RESPONSE_TO_HGF_VS_CSF2RB_AND_IL4_UP View Gene Set 1.834e-07 394 2.527e-06 172 Genes up-regulated in peripheral blood mononucleocytes by HGF [Gene ID=3082] compared to those regulated by CSF2RB (GM-CSF) [Gene ID=1437] and IL4 [Gene ID=3565]. www.broad.mit.e...
Broad DANG_MYC_TARGETS_UP View Gene Set 2.043e-07 127 2.793e-06 175 Genes up-regulated by MYC [Gene ID=4609] and whose promoters are bound by MYC according to MYC Target Gene Database. www.broad.mit.e...
Broad LI_WILMS_TUMOR_VS_FETAL_KIDNEY_1_UP View Gene Set 2.485e-07 178 3.377e-06 176 Genes up-regulated in Wilm's tumor samples compared to fetal kidney. www.broad.mit.e...
Broad SMID_BREAST_CANCER_BASAL_UP View Gene Set 2.947e-07 629 3.983e-06 177 Genes up-regulated in basal subtype of breast cancer samles. www.broad.mit.e...
Broad LINDGREN_BLADDER_CANCER_CLUSTER_2A_DN View Gene Set 2.991e-07 135 4.02e-06 178 Genes whose expression profile is specific to Cluster IIa of urothelial cell carcinoma (UCC) tumors. www.broad.mit.e...
Broad NAGASHIMA_NRG1_SIGNALING_UP View Gene Set 3.535e-07 171 4.697e-06 179 Genes up-regulated in MCF7 cells (breast cancer) after stimulation with NRG1 [Gene ID=3084]. www.broad.mit.e...
Broad PROVENZANI_METASTASIS_DN View Gene Set 3.529e-07 135 4.697e-06 179 Genes down-regulated in polysomal and total RNA samples from SW480 cells (primary colorectal carcinoma CRC) compared to the SW620 cells (lymph node metastasis from the same individual). www.broad.mit.e...
Broad SENESE_HDAC1_AND_HDAC2_TARGETS_UP View Gene Set 4.173e-07 224 5.515e-06 181 Genes up-regulated in U2OS cells (osteosarcoma) upon knockdown of both HDAC1 and HDAC2 [Gene ID=3065 3066] by RNAi. www.broad.mit.e...
Broad WATANABE_RECTAL_CANCER_RADIOTHERAPY_RESPONSIVE_DN View Gene Set 4.281e-07 90 5.604e-06 182 Genes down-regulated in rectal cancer patients resistant to radiotherapy (non-responders) relative to the sensitive ones (responders). www.broad.mit.e...
Broad PENG_GLUTAMINE_DEPRIVATION_DN View Gene Set 4.288e-07 84 5.604e-06 182 Genes down-regulated in BJAB cells (B-lymphoma) after glutamine [PubChem=738] deprivation. www.broad.mit.e...
Broad DELYS_THYROID_CANCER_UP View Gene Set 4.45e-07 397 5.785e-06 184 Genes up-regulated in papillary thyroid carcinoma (PTC) compared to normal tissue. www.broad.mit.e...
Broad LINDGREN_BLADDER_CANCER_CLUSTER_1_DN View Gene Set 4.54e-07 368 5.87e-06 185 Genes whose expression profile is specific to Custer I of urothelial cell carcinoma (UCC) tumors. www.broad.mit.e...
Broad TIEN_INTESTINE_PROBIOTICS_2HR_DN View Gene Set 4.605e-07 85 5.923e-06 186 Genes down-regulated in Caco-2 cells (intestinal epithelium) after coculture with the probiotic bacteria L. casei for 2h. www.broad.mit.e...
Broad THUM_SYSTOLIC_HEART_FAILURE_UP View Gene Set 5.203e-07 393 6.655e-06 187 Genes up-regulated in samples with systolic heart failure compared to normal hearts. www.broad.mit.e...
Broad SENGUPTA_NASOPHARYNGEAL_CARCINOMA_WITH_LMP1_UP View Gene Set 5.684e-07 375 7.232e-06 188 Genes up-regulated in nasopharyngeal carcinoma (NPC) positive for LMP1 [Gene ID=9260] a latent gene of Epstein-Barr virus (EBV). www.broad.mit.e...
Broad WINTER_HYPOXIA_UP View Gene Set 5.862e-07 85 7.418e-06 189 Genes up-regulated in head and neck tumor samples which clustered around known hypoxia genes. www.broad.mit.e...
Broad SEIDEN_ONCOGENESIS_BY_MET View Gene Set 6.199e-07 83 7.804e-06 190 Genes changed in xenograft tumors formed by DLD-1 or DKO-4 cells (colon cancer) overexpressing MET [Gene ID=4233]. www.broad.mit.e...
Broad CHEN_HOXA5_TARGETS_9HR_UP View Gene Set 7.066e-07 210 8.85e-06 191 Differentially expressed genes 9 hr after tinduction of HoxA5 [Gene ID=3205] expression in a breast cancer cell line. www.broad.mit.e...
Broad CHIANG_LIVER_CANCER_SUBCLASS_UNANNOTATED_DN View Gene Set 7.117e-07 155 8.867e-06 192 Marker genes down-regulated in the 'unannotated' subclass of hepatocellular carcinoma (HCC) samples. www.broad.mit.e...
Broad PUIFFE_INVASION_INHIBITED_BY_ASCITES_DN View Gene Set 8.058e-07 140 9.936e-06 193 Genes down-regulated in OV-90 cells (ovarian cancer) exposed to ascites which inhibited invasion. www.broad.mit.e...
Broad SHAFFER_IRF4_TARGETS_IN_ACTIVATED_B_LYMPHOCYTE View Gene Set 8.017e-07 78 9.936e-06 193 IRF4 [Gene ID=3662] target genes induced after activation of primary B lymphocytes by anti-IgM crosslinking. www.broad.mit.e...
Broad KAAB_FAILED_HEART_ATRIUM_DN View Gene Set 9.809e-07 139 1.203e-05 195 Genes down-regulated in atria of failing hearts (DCM and ICM) compared to healthy controls. www.broad.mit.e...
Broad MATSUDA_NATURAL_KILLER_DIFFERENTIATION View Gene Set 1.017e-06 430 1.241e-05 196 Genes changed between developmental stages of Valpha14i natural killer T lymphocyte cells (NKT). www.broad.mit.e...
Broad CAIRO_HEPATOBLASTOMA_UP View Gene Set 1.083e-06 200 1.315e-05 197 Genes up-regulated in hepatoblastoma samples compared to normal liver tissue. www.broad.mit.e...
Broad AMIT_SERUM_RESPONSE_240_MCF10A View Gene Set 1.148e-06 57 1.387e-05 198 Genes whose expression peaked at 240 min after stimulation of MCF10A cells with serum. www.broad.mit.e...
Broad MULLIGHAN_MLL_SIGNATURE_1_UP View Gene Set 1.234e-06 358 1.484e-05 199 The 'MLL signature 1': genes up-regulated in pediatric AML (acute myeloid leukemia) with rearranged MLL [Gene ID=4297] compared to all AML cases with the intact gene. www.broad.mit.e...
Broad GARY_CD5_TARGETS_UP View Gene Set 1.295e-06 463 1.549e-05 200 Genes up-regulated in Daudi cells (B lymphocytes) stably expressing CD5 [Gene ID=921] off a plasmid vector. www.broad.mit.e...

Gene Set Collection: Broad.c2.CP

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad ST_ERK1_ERK2_MAPK_PATHWAY View Gene Set 0.001657 29 0.03894 1 ERK1/ERK2 MAPK Pathway www.broad.mit.e...
Broad SA_FAS_SIGNALING View Gene Set 0.000966 6 0.03894 1 The TNF-type receptor Fas induces apoptosis on ligand binding. www.broad.mit.e...

Gene Set Collection: Broad.c2.CP.BIOCARTA

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad BIOCARTA_SALMONELLA_PATHWAY View Gene Set 4.503e-05 13 0.009771 1 How does salmonella hijack a cell www.broad.mit.e...
Broad BIOCARTA_CDC42RAC_PATHWAY View Gene Set 9.236e-05 16 0.01002 2 Role of PI3K subunit p85 in regulation of Actin Organization and Cell Migration www.broad.mit.e...

Gene Set Collection: Broad.c2.CP.KEGG

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad KEGG_PYRIMIDINE_METABOLISM View Gene Set 6.008e-07 98 0.0001117 1 Pyrimidine metabolism www.broad.mit.e...
Broad KEGG_CELL_CYCLE View Gene Set 6.397e-06 128 0.0005949 2 Cell cycle www.broad.mit.e...
Broad KEGG_PURINE_METABOLISM View Gene Set 1.773e-05 157 0.001099 3 Purine metabolism www.broad.mit.e...
Broad KEGG_PATHOGENIC_ESCHERICHIA_COLI_INFECTION View Gene Set 3.692e-05 59 0.001717 4 Pathogenic Escherichia coli infection www.broad.mit.e...
Broad KEGG_AMINOACYL_TRNA_BIOSYNTHESIS View Gene Set 0.0003392 41 0.01051 5 Aminoacyl-tRNA biosynthesis www.broad.mit.e...
Broad KEGG_SPLICEOSOME View Gene Set 0.0002906 118 0.01051 5 Spliceosome www.broad.mit.e...
Broad KEGG_UBIQUITIN_MEDIATED_PROTEOLYSIS View Gene Set 0.0003954 138 0.01051 5 Ubiquitin mediated proteolysis www.broad.mit.e...
Broad KEGG_RNA_POLYMERASE View Gene Set 0.000656 29 0.01525 8 RNA polymerase www.broad.mit.e...
Broad KEGG_BASE_EXCISION_REPAIR View Gene Set 0.001069 35 0.02027 9 Base excision repair www.broad.mit.e...
Broad KEGG_NUCLEOTIDE_EXCISION_REPAIR View Gene Set 0.00109 44 0.02027 9 Nucleotide excision repair www.broad.mit.e...
Broad KEGG_DNA_REPLICATION View Gene Set 0.001387 36 0.02251 11 DNA replication www.broad.mit.e...
Broad KEGG_ENDOCYTOSIS View Gene Set 0.001452 183 0.02251 11 Endocytosis www.broad.mit.e...
Broad KEGG_N_GLYCAN_BIOSYNTHESIS View Gene Set 0.001799 46 0.02574 13 N-Glycan biosynthesis www.broad.mit.e...
Broad KEGG_SMALL_CELL_LUNG_CANCER View Gene Set 0.002193 84 0.02913 14 Small cell lung cancer www.broad.mit.e...
Broad KEGG_HUNTINGTONS_DISEASE View Gene Set 0.003074 185 0.03811 15 Huntington's disease www.broad.mit.e...
Broad KEGG_APOPTOSIS View Gene Set 0.004034 88 0.0469 16 Apoptosis www.broad.mit.e...

Gene Set Collection: Broad.c2.CP.REACTOME

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad REACTOME_RNA_POLYMERASE_I_PROMOTER_CLEARANCE View Gene Set 3.438e-08 82 7.391e-06 1 Genes involved in RNA PolymerasePromoter Clearance www.broad.mit.e...
Broad REACTOME_RNA_POLYMERASE_I_III_AND_MITOCHONDRIAL_TRANSCRIPTION View Gene Set 3.199e-08 120 7.391e-06 1 Genes involved in RNA Polymerase I RNA Polymerase III and Mitochondrial Transcription www.broad.mit.e...
Broad REACTOME_TELOMERE_MAINTENANCE View Gene Set 6.56e-08 77 9.402e-06 3 Genes involved in Telomere Maintenance www.broad.mit.e...
Broad REACTOME_RNA_POLYMERASE_I_PROMOTER_OPENING View Gene Set 4.351e-07 59 4.677e-05 4 Genes involved in RNA Polymerase I Promoter Opening www.broad.mit.e...
Broad REACTOME_CELL_CYCLE_MITOTIC View Gene Set 7.694e-07 306 6.617e-05 5 Genes involved in Cell Cycle Mitotic www.broad.mit.e...
Broad REACTOME_TRANSCRIPTION View Gene Set 1.663e-06 188 0.0001192 6 Genes involved in Transcription www.broad.mit.e...
Broad REACTOME_PACKAGING_OF_TELOMERE_ENDS View Gene Set 4.884e-06 49 0.0003 7 Genes involved in Packaging Of Telomere Ends www.broad.mit.e...
Broad REACTOME_METABLISM_OF_NUCLEOTIDES View Gene Set 8.865e-06 71 0.0004765 8 Genes involved in Metablism of nucleotides www.broad.mit.e...
Broad REACTOME_S_PHASE View Gene Set 1.837e-05 103 0.0008775 9 Genes involved in S Phase www.broad.mit.e...
Broad REACTOME_PURINE_METABOLISM View Gene Set 3.526e-05 30 0.001516 10 Genes involved in Purine metabolism www.broad.mit.e...
Broad REACTOME_G1_S_TRANSITION View Gene Set 5.274e-05 102 0.002062 11 Genes involved in G1/S Transition www.broad.mit.e...
Broad REACTOME_APOPTOSIS View Gene Set 0.0002776 129 0.009949 12 Genes involved in Apoptosis www.broad.mit.e...
Broad REACTOME_RNA_POLYMERASE_I_CHAIN_ELONGATION View Gene Set 0.0003635 34 0.01202 13 Genes involved in RNA PolymeraseChain Elongation www.broad.mit.e...
Broad REACTOME_PURINE_SALVAGE_REACTIONS View Gene Set 0.0004061 12 0.01247 14 Genes involved in Purine salvage reactions www.broad.mit.e...
Broad REACTOME_SMOOTH_MUSCLE_CONTRACTION View Gene Set 0.000474 24 0.01359 15 Genes involved in Smooth Muscle Contraction www.broad.mit.e...
Broad REACTOME_ELECTRON_TRANSPORT_CHAIN View Gene Set 0.0006264 75 0.01683 16 Genes involved in Electron Transport Chain www.broad.mit.e...
Broad REACTOME_DNA_REPAIR View Gene Set 0.0009155 102 0.02316 17 Genes involved in DNA Repair www.broad.mit.e...
Broad REACTOME_GENE_EXPRESSION View Gene Set 0.001006 415 0.02404 18 Genes involved in Gene Expression www.broad.mit.e...
Broad REACTOME_ACTIVATION_OF_BH3_ONLY_PROTEINS View Gene Set 0.001387 16 0.02628 19 Genes involved in Activation of BH3-only proteins www.broad.mit.e...
Broad REACTOME_ACTIVATION_OF_THE_PRE_REPLICATIVE_COMPLEX View Gene Set 0.001333 30 0.02628 19 Genes involved in Activation of the pre-replicative complex www.broad.mit.e...
Broad REACTOME_DNA_STRAND_ELONGATION View Gene Set 0.001283 31 0.02628 19 Genes involved in DNA strand elongation www.broad.mit.e...
Broad REACTOME_G2_M_TRANSITION View Gene Set 0.001742 84 0.02628 19 Genes involved in G2/M Transition www.broad.mit.e...
Broad REACTOME_NUCLEAR_EVENTS_KINASE_AND_TRANSCRIPTION_FACTOR_ACTIVATION View Gene Set 0.001723 24 0.02628 19 Genes involved in Nuclear Events (kinase and transcription factor activation) www.broad.mit.e...
Broad REACTOME_RNA_POLYMERASE_III_TRANSCRIPTION_INITIATION View Gene Set 0.001834 29 0.02628 19 Genes involved in RNA Polymerase III Transcription Initiation www.broad.mit.e...
Broad REACTOME_RNA_POLYMERASE_III_TRANSCRIPTION_INITIATION_FROM_TYPE_2_PROMOTER View Gene Set 0.001546 20 0.02628 19 Genes involved in RNA Polymerase III Transcription Initiation From Type 2 Promoter www.broad.mit.e...
Broad REACTOME_SYNTHESIS_OF_DNA View Gene Set 0.001281 89 0.02628 19 Genes involved in Synthesis of DNA www.broad.mit.e...
Broad REACTOME_TRANSCRIPTION_COUPLED_NER View Gene Set 0.00154 44 0.02628 19 Genes involved in Transcription-coupled NER (TC-NER) www.broad.mit.e...
Broad REACTOME_TRNA_AMINOACYLATION View Gene Set 0.001785 40 0.02628 19 Genes involved in tRNA Aminoacylation www.broad.mit.e...
Broad REACTOME_PURINE_RIBONUCLEOSIDE_MONOPHOSPHATE_BIOSYNTHESIS View Gene Set 0.001666 11 0.02628 19 Genes involved in Purine ribonucleoside monophosphate biosynthesis www.broad.mit.e...
Broad REACTOME_METABOLISM_OF_RNA View Gene Set 0.001467 95 0.02628 19 Genes involved in Metabolism of RNA www.broad.mit.e...
Broad REACTOME_EXTENSION_OF_TELOMERES View Gene Set 0.001939 28 0.0269 31 Genes involved in Extension of Telomeres www.broad.mit.e...
Broad REACTOME_PYRUVATE_METABOLISM_AND_TCA_CYCLE View Gene Set 0.00203 36 0.02728 32 Genes involved in Pyruvate metabolism and TCA cycle www.broad.mit.e...
Broad REACTOME_BASIGIN_INTERACTIONS View Gene Set 0.002374 25 0.03094 33 Genes involved in Basigin interactions www.broad.mit.e...
Broad REACTOME_NUCLEOTIDE_EXCISION_REPAIR View Gene Set 0.002571 49 0.03251 34 Genes involved in Nucleotide Excision Repair www.broad.mit.e...
Broad REACTOME_CELL_CYCLE_CHECKPOINTS View Gene Set 0.002763 110 0.033 35 Genes involved in Cell Cycle Checkpoints www.broad.mit.e...
Broad REACTOME_MAPK_TARGETS_NUCLEAR_EVENTS_MEDIATED_BY_MAP_KINASES View Gene Set 0.002688 30 0.033 35 Genes involved in MAPK targets/Nuclear events mediated by MAP kinases www.broad.mit.e...
Broad REACTOME_METABOLISM_OF_PROTEINS View Gene Set 0.002869 215 0.03334 37 Genes involved in Metabolism of proteins www.broad.mit.e...
Broad REACTOME_INTRINSIC_PATHWAY_FOR_APOPTOSIS View Gene Set 0.003088 29 0.03494 38 Genes involved in Intrinsic Pathway for Apoptosis www.broad.mit.e...
Broad REACTOME_RNA_POLYMERASE_I_PROMOTER_ESCAPE View Gene Set 0.003491 20 0.03849 39 Genes involved in RNA Polymerase I Promoter Escape www.broad.mit.e...
Broad REACTOME_PYRUVATE_METABOLISM View Gene Set 0.003604 18 0.03875 40 Genes involved in Pyruvate metabolism www.broad.mit.e...
Broad REACTOME_DNA_REPLICATION_PRE_INITIATION View Gene Set 0.003941 76 0.04092 41 Genes involved in DNA Replication Pre-Initiation www.broad.mit.e...
Broad REACTOME_RNA_POLYMERASE_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER View Gene Set 0.003997 22 0.04092 41 Genes involved in RNA Polymerase III Transcription Initiation From Type 3 Promoter www.broad.mit.e...
Broad REACTOME_CENTROSOME_MATURATION View Gene Set 0.004355 72 0.04299 43 Genes involved in Centrosome maturation www.broad.mit.e...
Broad REACTOME_MAP_KINASES_ACTIVATION_IN_TLR_CASCADE View Gene Set 0.004399 44 0.04299 43 Genes involved in MAP kinases activation in TLR cascade www.broad.mit.e...
Broad REACTOME_TRANSFORMATION_OF_LANOSTEROL_TO_CHOLESTEROL View Gene Set 0.004512 10 0.04311 45 Genes involved in Transformation of lanosterol to cholesterol www.broad.mit.e...
Broad REACTOME_BETACATENIN_PHOSPHORYLATION_CASCADE View Gene Set 0.004821 13 0.04506 46 Genes involved in Beta-catenin phosphorylation cascade www.broad.mit.e...
Broad REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_ View Gene Set 0.005172 58 0.04717 47 Genes involved in Cyclin E associated events during G1/S transition www.broad.mit.e...
Broad REACTOME_TRAF6_MEDIATED_INDUCTION_OF_THE_ANTIVIRAL_CYTOKINE_IFN_ALPHA_BETA_CASCADE View Gene Set 0.005265 53 0.04717 47 Genes involved in TRAF6 Mediated Induction of the antiviral cytokine IFN-alphaeta cascade www.broad.mit.e...

Gene Set Collection: Broad.c3.MIR

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad GTGCCTT MIR-506 View Gene Set 0.0001259 605 0.01391 1 Targets of MicroRNA GTGCCTT MIR-506 www.broad.mit.e... MIR-506...
Broad ACACTAC MIR-142-3P View Gene Set 7.21e-05 110 0.01391 1 Targets of MicroRNA ACACTAC MIR-142-3P www.broad.mit.e... MIR-142-3P...
Broad ACATTCC MIR-1 MIR-206 View Gene Set 0.0006079 248 0.04478 3 Targets of MicroRNA ACATTCC MIR-1 MIR-206 www.broad.mit.e... MIR-1... MIR-206...
Broad CTACTGT MIR-199A View Gene Set 0.001079 146 0.04771 4 Targets of MicroRNA CTACTGT MIR-199A www.broad.mit.e... MIR-199A...
Broad CAGCTTT MIR-320 View Gene Set 0.0009103 220 0.04771 4 Targets of MicroRNA CAGCTTT MIR-320 www.broad.mit.e... MIR-320...

Gene Set Collection: Broad.c3.TFT

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad GGGCGGR_V$SP1_Q6 View Gene Set 3.867e-12 2120 2.378e-09 1 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GGGCGGR which matches annotation for SP1: Sp1 transcription factor www.broad.mit.e...
Broad SCGGAAGY_V$ELK1_02 View Gene Set 1.01e-08 784 3.104e-06 2 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif SCGGAAGY which matches annotation for ELK1: ELK1 member of ETS oncogene family www.broad.mit.e...
Broad RCGCANGCGY_V$NRF1_Q6 View Gene Set 3.523e-06 580 0.0007221 3 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif RCGCANGCGY which matches annotation for NRF1: nuclear respiratory factor 1 www.broad.mit.e...
Broad TCCCRNNRTGC_UNKNOWN View Gene Set 1.069e-05 130 0.001644 4 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif TCCCRNNRTGC. Motif does not match any known transcription factor www.broad.mit.e...
Broad CACGTG_V$MYC_Q2 View Gene Set 1.519e-05 734 0.001869 5 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif CACGTG which matches annotation for MYC: v-myc myelocytomatosis viral oncogene homolog (avian) www.broad.mit.e...
Broad MGGAAGTG_V$GABP_B View Gene Set 7.012e-05 512 0.007188 6 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif MGGAAGTG which matches annotation for GABPA: GA binding protein transcription factor alpha subunit 60kDa<br> GABPB2: GA binding protein transcription factor beta subunit 2 www.broad.mit.e...
Broad V$NRF2_01 View Gene Set 0.0001012 166 0.007777 7 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif ACCGGAAGNG which matches annotation for GABPB1: GA binding protein transcription factor beta subunit 1. www.broad.mit.e...
Broad ACTAYRNNNCCCR_UNKNOWN View Gene Set 8.904e-05 293 0.007777 7 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif ACTAYRNNNCCCR. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$USF_01 View Gene Set 0.0001497 186 0.009207 9 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif NNRYCACGTGRYNN. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$NFMUE1_Q6 View Gene Set 0.000149 175 0.009207 9 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif CGGCCATCT. Motif does not match any known transcription factor www.broad.mit.e...
Broad GATTGGY_V$NFY_Q6_01 View Gene Set 0.000189 830 0.01057 11 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif GATTGGY. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$CREB_02 View Gene Set 0.0004698 185 0.02408 12 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNGNTGACGTNN which matches annotation for CREB1: cAMP responsive element binding protein 1 www.broad.mit.e...
Broad KRCTCNNNNMANAGC_UNKNOWN View Gene Set 0.000658 60 0.03113 13 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif KRCTCNNNNMANAGC. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$ELK1_02 View Gene Set 0.001094 170 0.04486 14 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNNNCCGGAARTNN which matches annotation for ELK1: ELK1 member of ETS oncogene family www.broad.mit.e...
Broad GCCATNTTG_V$YY1_Q6 View Gene Set 0.001024 289 0.04486 14 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GCCATNTTG which matches annotation for YY1: YY1 transcription factor www.broad.mit.e...
Broad V$CMYB_01 View Gene Set 0.001348 179 0.04607 16 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NCNRNNGRCNGTTGGKGG which matches annotation for MYB: v-myb myeloblastosis viral oncogene homolog (avian) www.broad.mit.e...
Broad V$SRF_C View Gene Set 0.001311 174 0.04607 16 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif DCCWTATATGGNCWN which matches annotation for SRF: serum response factor (c-fos serum response element-binding transcription factor) www.broad.mit.e...
Broad TAANNYSGCG_UNKNOWN View Gene Set 0.001339 60 0.04607 16 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif TAANNYSGCG. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$NRF1_Q6 View Gene Set 0.00146 151 0.04727 19 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif CGCATGCGCR which matches annotation for NRF1: nuclear respiratory factor 1 www.broad.mit.e...
Broad V$SREBP1_01 View Gene Set 0.00157 133 0.04827 20 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NATCACGTGAY which matches annotation for SREBF1: sterol regulatory element binding transcription factor 1 www.broad.mit.e...

Gene Set Collection: Broad.c4.CGN

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad MORF_HDAC2 View Gene Set 4.321e-14 256 1.845e-11 1 Neighborhood of HDAC2 www.broad.mit.e...
Broad MORF_RAD23A View Gene Set 1.15e-12 316 2.456e-10 2 Neighborhood of RAD23A www.broad.mit.e...
Broad MORF_AATF View Gene Set 2.056e-12 179 2.926e-10 3 Neighborhood of AATF www.broad.mit.e...
Broad MORF_BUB3 View Gene Set 5.278e-12 256 5.634e-10 4 Neighborhood of BUB3 www.broad.mit.e...
Broad MORF_DEK View Gene Set 4.877e-11 229 4.165e-09 5 Neighborhood of DEK www.broad.mit.e...
Broad MORF_PRKAG1 View Gene Set 8.07e-11 202 5.743e-09 6 Neighborhood of PRKAG1 www.broad.mit.e...
Broad MORF_RPA2 View Gene Set 5.271e-10 170 3.203e-08 7 Neighborhood of RPA2 www.broad.mit.e...
Broad MORF_GNB1 View Gene Set 6.001e-10 276 3.203e-08 7 Neighborhood of GNB1 www.broad.mit.e...
Broad MORF_EIF3S2 View Gene Set 8.28e-10 220 3.928e-08 9 Neighborhood of EIF3S2 www.broad.mit.e...
Broad MORF_PPP1CC View Gene Set 1.796e-09 150 7.671e-08 10 Neighborhood of PPP1CC www.broad.mit.e...
Broad MORF_CSNK2B View Gene Set 5.056e-09 256 1.963e-07 11 Neighborhood of CSNK2B www.broad.mit.e...
Broad MORF_PRKDC View Gene Set 8.369e-09 173 2.978e-07 12 Neighborhood of PRKDC www.broad.mit.e...
Broad MORF_PAPSS1 View Gene Set 1.16e-08 98 3.809e-07 13 Neighborhood of PAPSS1 www.broad.mit.e...
Broad MORF_XRCC5 View Gene Set 1.27e-08 210 3.874e-07 14 Neighborhood of XRCC5 www.broad.mit.e...
Broad MORF_DDB1 View Gene Set 2.833e-08 220 8.063e-07 15 Neighborhood of DDB1 www.broad.mit.e...
Broad MORF_HDAC1 View Gene Set 4.035e-08 222 1.077e-06 16 Neighborhood of HDAC1 www.broad.mit.e...
Broad MORF_DAP3 View Gene Set 6.266e-08 175 1.574e-06 17 Neighborhood of DAP3 www.broad.mit.e...
Broad MORF_RAN View Gene Set 1.984e-07 242 4.707e-06 18 Neighborhood of RAN www.broad.mit.e...
Broad MORF_SOD1 View Gene Set 2.768e-07 247 5.256e-06 19 Neighborhood of SOD1 www.broad.mit.e...
Broad MORF_ACP1 View Gene Set 2.611e-07 178 5.256e-06 19 Neighborhood of ACP1 www.broad.mit.e...
Broad MORF_CDC16 View Gene Set 2.38e-07 67 5.256e-06 19 Neighborhood of CDC16 www.broad.mit.e...
Broad MORF_RAB1A View Gene Set 2.831e-07 179 5.256e-06 19 Neighborhood of RAB1A www.broad.mit.e...
Broad MORF_RAC1 View Gene Set 2.602e-07 196 5.256e-06 19 Neighborhood of RAC1 www.broad.mit.e...
Broad MORF_EI24 View Gene Set 4.326e-07 136 7.697e-06 24 Neighborhood of EI24 www.broad.mit.e...
Broad GNF2_PA2G4 View Gene Set 4.588e-07 73 7.836e-06 25 Neighborhood of PA2G4 www.broad.mit.e...
Broad MORF_CDC10 View Gene Set 5.861e-07 120 9.625e-06 26 Neighborhood of CDC10 www.broad.mit.e...
Broad MORF_DNMT1 View Gene Set 6.442e-07 105 1.019e-05 27 Neighborhood of DNMT1 www.broad.mit.e...
Broad MORF_UBE2I View Gene Set 9.046e-07 208 1.379e-05 28 Neighborhood of UBE2I www.broad.mit.e...
Broad MORF_PHB View Gene Set 1.205e-06 112 1.774e-05 29 Neighborhood of PHB www.broad.mit.e...
Broad MORF_PPP6C View Gene Set 1.273e-06 88 1.812e-05 30 Neighborhood of PPP6C www.broad.mit.e...
Broad MORF_HAT1 View Gene Set 1.812e-06 155 2.496e-05 31 Neighborhood of HAT1 www.broad.mit.e...
Broad MORF_ESPL1 View Gene Set 2.067e-06 58 2.758e-05 32 Neighborhood of ESPL1 www.broad.mit.e...
Broad MORF_CDK2 View Gene Set 2.545e-06 63 3.293e-05 33 Neighborhood of CDK2 www.broad.mit.e...
Broad MORF_AP2M1 View Gene Set 5.311e-06 197 6.479e-05 34 Neighborhood of AP2M1 www.broad.mit.e...
Broad MORF_FBL View Gene Set 5.262e-06 121 6.479e-05 34 Neighborhood of FBL www.broad.mit.e...
Broad GNF2_RAN View Gene Set 5.825e-06 78 6.91e-05 36 Neighborhood of RAN www.broad.mit.e...
Broad MORF_PPP1CA View Gene Set 6.473e-06 145 7.47e-05 37 Neighborhood of PPP1CA www.broad.mit.e...
Broad GNF2_STAT6 View Gene Set 7.24e-06 75 8.136e-05 38 Neighborhood of STAT6 www.broad.mit.e...
Broad GNF2_APEX1 View Gene Set 8.534e-06 72 9.344e-05 39 Neighborhood of APEX1 www.broad.mit.e...
Broad MORF_ANP32B View Gene Set 1.046e-05 174 0.0001116 40 Neighborhood of ANP32B www.broad.mit.e...
Broad MORF_TERF1 View Gene Set 1.463e-05 57 0.0001523 41 Neighborhood of TERF1 www.broad.mit.e...
Broad MORF_PRKAR1A View Gene Set 1.536e-05 133 0.0001561 42 Neighborhood of PRKAR1A www.broad.mit.e...
Broad MORF_PSMC2 View Gene Set 1.887e-05 100 0.0001874 43 Neighborhood of PSMC2 www.broad.mit.e...
Broad MORF_RFC4 View Gene Set 1.979e-05 137 0.0001921 44 Neighborhood of RFC4 www.broad.mit.e...
Broad MORF_UBE2A View Gene Set 2.466e-05 44 0.0002289 45 Neighborhood of UBE2A www.broad.mit.e...
Broad GNF2_MSN View Gene Set 2.424e-05 24 0.0002289 45 Neighborhood of MSN www.broad.mit.e...
Broad MORF_BMI1 View Gene Set 3.208e-05 71 0.0002915 47 Neighborhood of BMI1 www.broad.mit.e...
Broad MORF_RAD54L View Gene Set 3.633e-05 94 0.0003232 48 Neighborhood of RAD54L www.broad.mit.e...
Broad MORF_SKP1A View Gene Set 4.324e-05 175 0.0003768 49 Neighborhood of SKP1A www.broad.mit.e...
Broad MORF_MTA1 View Gene Set 4.425e-05 95 0.0003779 50 Neighborhood of MTA1 www.broad.mit.e...
Broad MORF_RRM1 View Gene Set 5.014e-05 90 0.0004146 51 Neighborhood of RRM1 www.broad.mit.e...
Broad GNF2_RFC4 View Gene Set 5.049e-05 57 0.0004146 51 Neighborhood of RFC4 www.broad.mit.e...
Broad GCM_ACTG1 View Gene Set 5.629e-05 113 0.0004535 53 Neighborhood of ACTG1 www.broad.mit.e...
Broad GNF2_CD48 View Gene Set 6.481e-05 31 0.0005125 54 Neighborhood of CD48 www.broad.mit.e...
Broad GNF2_RFC3 View Gene Set 6.903e-05 38 0.0005359 55 Neighborhood of RFC3 www.broad.mit.e...
Broad MORF_G22P1 View Gene Set 7.352e-05 145 0.0005413 56 Neighborhood of G22P1 www.broad.mit.e...
Broad GNF2_RRM1 View Gene Set 7.326e-05 82 0.0005413 56 Neighborhood of RRM1 www.broad.mit.e...
Broad GNF2_CD53 View Gene Set 7.325e-05 54 0.0005413 56 Neighborhood of CD53 www.broad.mit.e...
Broad GNF2_SERPINB5 View Gene Set 7.912e-05 25 0.0005726 59 Neighborhood of SERPINB5 www.broad.mit.e...
Broad MORF_ATOX1 View Gene Set 8.22e-05 72 0.000585 60 Neighborhood of ATOX1 www.broad.mit.e...
Broad MORF_RAB6A View Gene Set 8.699e-05 63 0.0006089 61 Neighborhood of RAB6A www.broad.mit.e...
Broad GCM_CRKL View Gene Set 9.008e-05 50 0.0006204 62 Neighborhood of CRKL www.broad.mit.e...
Broad MORF_PPP2R5E View Gene Set 9.997e-05 76 0.0006776 63 Neighborhood of PPP2R5E www.broad.mit.e...
Broad MORF_NPM1 View Gene Set 0.0001092 152 0.0007285 64 Neighborhood of NPM1 www.broad.mit.e...
Broad MORF_RAD21 View Gene Set 0.0001155 157 0.0007587 65 Neighborhood of RAD21 www.broad.mit.e...
Broad MORF_EIF3S6 View Gene Set 0.0001337 108 0.0008648 66 Neighborhood of EIF3S6 www.broad.mit.e...
Broad MORF_RAD23B View Gene Set 0.0001389 159 0.0008855 67 Neighborhood of RAD23B www.broad.mit.e...
Broad MORF_ACTG1 View Gene Set 0.0001456 134 0.0009144 68 Neighborhood of ACTG1 www.broad.mit.e...
Broad GNF2_MCM5 View Gene Set 0.0001606 51 0.0009941 69 Neighborhood of MCM5 www.broad.mit.e...
Broad MORF_UBE2N View Gene Set 0.0001699 79 0.001036 70 Neighborhood of UBE2N www.broad.mit.e...
Broad MORF_TERF2IP View Gene Set 0.000197 99 0.001144 71 Neighborhood of TERF2IP www.broad.mit.e...
Broad MORF_UNG View Gene Set 0.0001905 65 0.001144 71 Neighborhood of UNG www.broad.mit.e...
Broad MORF_EIF4E View Gene Set 0.0001967 76 0.001144 71 Neighborhood of EIF4E www.broad.mit.e...
Broad MORF_PPP2CA View Gene Set 0.0001983 110 0.001144 71 Neighborhood of PPP2CA www.broad.mit.e...
Broad MORF_PSMC1 View Gene Set 0.0002296 162 0.001307 75 Neighborhood of PSMC1 www.broad.mit.e...
Broad MORF_CSNK1D View Gene Set 0.0002375 65 0.001334 76 Neighborhood of CSNK1D www.broad.mit.e...
Broad MORF_DEAF1 View Gene Set 0.0002434 54 0.001345 77 Neighborhood of DEAF1 www.broad.mit.e...
Broad MORF_RAF1 View Gene Set 0.0002456 94 0.001345 77 Neighborhood of RAF1 www.broad.mit.e...
Broad GCM_APEX1 View Gene Set 0.0002602 102 0.001407 79 Neighborhood of APEX1 www.broad.mit.e...
Broad MORF_BUB1B View Gene Set 0.0002655 61 0.001417 80 Neighborhood of BUB1B www.broad.mit.e...
Broad MORF_FEN1 View Gene Set 0.0003055 58 0.001566 81 Neighborhood of FEN1 www.broad.mit.e...
Broad MORF_RAB5A View Gene Set 0.0003072 83 0.001566 81 Neighborhood of RAB5A www.broad.mit.e...
Broad GCM_PFN1 View Gene Set 0.0003009 47 0.001566 81 Neighborhood of PFN1 www.broad.mit.e...
Broad GNF2_CDH3 View Gene Set 0.000308 24 0.001566 81 Neighborhood of CDH3 www.broad.mit.e...
Broad GNF2_SMC4L1 View Gene Set 0.0003567 75 0.001792 85 Neighborhood of SMC4L1 www.broad.mit.e...
Broad GCM_ERBB2IP View Gene Set 0.0003844 57 0.001909 86 Neighborhood of ERBB2IP www.broad.mit.e...
Broad MORF_BECN1 View Gene Set 0.0004341 93 0.002131 87 Neighborhood of BECN1 www.broad.mit.e...
Broad MORF_USP5 View Gene Set 0.0004543 46 0.002204 88 Neighborhood of USP5 www.broad.mit.e...
Broad GNF2_FEN1 View Gene Set 0.0004969 49 0.002384 89 Neighborhood of FEN1 www.broad.mit.e...
Broad MORF_RPA1 View Gene Set 0.0005065 55 0.002403 90 Neighborhood of RPA1 www.broad.mit.e...
Broad GNF2_MSH2 View Gene Set 0.0005877 26 0.002758 91 Neighborhood of MSH2 www.broad.mit.e...
Broad MORF_XPC View Gene Set 0.0006372 55 0.002926 92 Neighborhood of XPC www.broad.mit.e...
Broad GCM_ANP32B View Gene Set 0.000634 32 0.002926 92 Neighborhood of ANP32B www.broad.mit.e...
Broad GNF2_MSH6 View Gene Set 0.0006477 30 0.002942 94 Neighborhood of MSH6 www.broad.mit.e...
Broad MORF_PCNA View Gene Set 0.0007151 71 0.003214 95 Neighborhood of PCNA www.broad.mit.e...
Broad GCM_MAP4K4 View Gene Set 0.0008244 144 0.003667 96 Neighborhood of MAP4K4 www.broad.mit.e...
Broad MORF_CCNI View Gene Set 0.0009018 76 0.00397 97 Neighborhood of CCNI www.broad.mit.e...
Broad GNF2_NS View Gene Set 0.000958 35 0.004174 98 Neighborhood of NS www.broad.mit.e...
Broad GNF2_KPNB1 View Gene Set 0.001136 52 0.004855 99 Neighborhood of KPNB1 www.broad.mit.e...
Broad GNF2_PTPN6 View Gene Set 0.001137 44 0.004855 99 Neighborhood of PTPN6 www.broad.mit.e...
Broad GNF2_MLH1 View Gene Set 0.001447 36 0.006015 101 Neighborhood of MLH1 www.broad.mit.e...
Broad GNF2_LYN View Gene Set 0.001442 26 0.006015 101 Neighborhood of LYN www.broad.mit.e...
Broad GNF2_MCM4 View Gene Set 0.001451 50 0.006015 101 Neighborhood of MCM4 www.broad.mit.e...
Broad GCM_CSNK2B View Gene Set 0.001511 88 0.006204 104 Neighborhood of CSNK2B www.broad.mit.e...
Broad GCM_DDX5 View Gene Set 0.001528 52 0.006215 105 Neighborhood of DDX5 www.broad.mit.e...
Broad GNF2_BUB1B View Gene Set 0.001608 46 0.006479 106 Neighborhood of BUB1B www.broad.mit.e...
Broad GNF2_INPP5D View Gene Set 0.001634 38 0.00652 107 Neighborhood of INPP5D www.broad.mit.e...
Broad MORF_ERH View Gene Set 0.002161 103 0.008544 108 Neighborhood of ERH www.broad.mit.e...
Broad MORF_EIF4A2 View Gene Set 0.002204 120 0.008636 109 Neighborhood of EIF4A2 www.broad.mit.e...
Broad MORF_SMC1L1 View Gene Set 0.002372 47 0.009207 110 Neighborhood of SMC1L1 www.broad.mit.e...
Broad GCM_PSME1 View Gene Set 0.002396 76 0.009215 111 Neighborhood of PSME1 www.broad.mit.e...
Broad GCM_NF2 View Gene Set 0.002515 235 0.00959 112 Neighborhood of NF2 www.broad.mit.e...
Broad MORF_BUB1 View Gene Set 0.00267 49 0.009927 113 Neighborhood of BUB1 www.broad.mit.e...
Broad MORF_CUL1 View Gene Set 0.002674 62 0.009927 113 Neighborhood of CUL1 www.broad.mit.e...
Broad MORF_GMPS View Gene Set 0.002651 48 0.009927 113 Neighborhood of GMPS www.broad.mit.e...
Broad GNF2_ICAM3 View Gene Set 0.002755 36 0.01014 116 Neighborhood of ICAM3 www.broad.mit.e...
Broad GNF2_ELAC2 View Gene Set 0.002886 32 0.01053 117 Neighborhood of ELAC2 www.broad.mit.e...
Broad MORF_MSH2 View Gene Set 0.00296 52 0.01071 118 Neighborhood of MSH2 www.broad.mit.e...
Broad MORF_CCNF View Gene Set 0.003129 65 0.0112 119 Neighborhood of CCNF www.broad.mit.e...
Broad MORF_SART1 View Gene Set 0.003149 55 0.0112 119 Neighborhood of SART1 www.broad.mit.e...
Broad MORF_MAP2K2 View Gene Set 0.003291 123 0.01152 121 Neighborhood of MAP2K2 www.broad.mit.e...
Broad GNF2_VAV1 View Gene Set 0.003291 34 0.01152 121 Neighborhood of VAV1 www.broad.mit.e...
Broad GNF2_RRM2 View Gene Set 0.003889 36 0.01339 123 Neighborhood of RRM2 www.broad.mit.e...
Broad GNF2_ANP32B View Gene Set 0.003867 29 0.01339 123 Neighborhood of ANP32B www.broad.mit.e...
Broad GNF2_CASP4 View Gene Set 0.003954 23 0.01351 125 Neighborhood of CASP4 www.broad.mit.e...
Broad MORF_CTBP1 View Gene Set 0.004088 149 0.01385 126 Neighborhood of CTBP1 www.broad.mit.e...
Broad GCM_HDAC1 View Gene Set 0.004206 30 0.01414 127 Neighborhood of HDAC1 www.broad.mit.e...
Broad MORF_TPR View Gene Set 0.004253 131 0.01417 128 Neighborhood of TPR www.broad.mit.e...
Broad GNF2_MYD88 View Gene Set 0.00428 55 0.01417 128 Neighborhood of MYD88 www.broad.mit.e...
Broad MORF_IKBKG View Gene Set 0.004359 119 0.01421 130 Neighborhood of IKBKG www.broad.mit.e...
Broad MORF_PTPN11 View Gene Set 0.004357 93 0.01421 130 Neighborhood of PTPN11 www.broad.mit.e...
Broad GCM_BMPR2 View Gene Set 0.004562 68 0.01476 132 Neighborhood of BMPR2 www.broad.mit.e...
Broad MORF_AP3D1 View Gene Set 0.004731 119 0.01519 133 Neighborhood of AP3D1 www.broad.mit.e...
Broad MORF_NME2 View Gene Set 0.00491 145 0.01564 134 Neighborhood of NME2 www.broad.mit.e...
Broad GCM_AQP4 View Gene Set 0.005318 43 0.01682 135 Neighborhood of AQP4 www.broad.mit.e...
Broad GCM_RAN View Gene Set 0.005361 160 0.01683 136 Neighborhood of RAN www.broad.mit.e...
Broad GNF2_FBL View Gene Set 0.005403 119 0.01684 137 Neighborhood of FBL www.broad.mit.e...
Broad GCM_RAP2A View Gene Set 0.005485 30 0.01697 138 Neighborhood of RAP2A www.broad.mit.e...
Broad GNF2_HLA-C View Gene Set 0.005664 44 0.0174 139 Neighborhood of HLA-C www.broad.mit.e...
Broad MORF_SNRP70 View Gene Set 0.005811 50 0.01772 140 Neighborhood of SNRP70 www.broad.mit.e...
Broad GCM_UBE2N View Gene Set 0.005863 125 0.01776 141 Neighborhood of UBE2N www.broad.mit.e...
Broad MORF_SP3 View Gene Set 0.005928 69 0.01782 142 Neighborhood of SP3 www.broad.mit.e...
Broad GCM_RAB10 View Gene Set 0.006232 143 0.01861 143 Neighborhood of RAB10 www.broad.mit.e...
Broad MORF_RFC1 View Gene Set 0.00631 98 0.01871 144 Neighborhood of RFC1 www.broad.mit.e...
Broad GNF2_PAK2 View Gene Set 0.006418 27 0.0189 145 Neighborhood of PAK2 www.broad.mit.e...
Broad GNF2_NPM1 View Gene Set 0.006925 57 0.02025 146 Neighborhood of NPM1 www.broad.mit.e...
Broad GCM_CBFB View Gene Set 0.00768 59 0.02231 147 Neighborhood of CBFB www.broad.mit.e...
Broad MORF_GSPT1 View Gene Set 0.00788 41 0.02274 148 Neighborhood of GSPT1 www.broad.mit.e...
Broad GNF2_PCNA View Gene Set 0.008005 62 0.02294 149 Neighborhood of PCNA www.broad.mit.e...
Broad GNF2_SMC1L1 View Gene Set 0.008322 24 0.02369 150 Neighborhood of SMC1L1 www.broad.mit.e...
Broad MORF_PRDX3 View Gene Set 0.008594 79 0.0243 151 Neighborhood of PRDX3 www.broad.mit.e...
Broad GNF2_CDC2 View Gene Set 0.008726 56 0.02451 152 Neighborhood of CDC2 www.broad.mit.e...
Broad GNF2_CENPF View Gene Set 0.008919 56 0.02489 153 Neighborhood of CENPF www.broad.mit.e...
Broad MORF_MBD4 View Gene Set 0.0092 76 0.02551 154 Neighborhood of MBD4 www.broad.mit.e...
Broad GNF2_HAT1 View Gene Set 0.01136 45 0.03129 155 Neighborhood of HAT1 www.broad.mit.e...
Broad MORF_PPP5C View Gene Set 0.01168 81 0.03198 156 Neighborhood of PPP5C www.broad.mit.e...
Broad GNF2_CDC20 View Gene Set 0.01193 52 0.03245 157 Neighborhood of CDC20 www.broad.mit.e...
Broad MORF_SS18 View Gene Set 0.01275 55 0.03445 158 Neighborhood of SS18 www.broad.mit.e...
Broad GCM_SIRT2 View Gene Set 0.0133 39 0.03571 159 Neighborhood of SIRT2 www.broad.mit.e...
Broad GNF2_PECAM1 View Gene Set 0.0141 50 0.03764 160 Neighborhood of PECAM1 www.broad.mit.e...
Broad MORF_HEAB View Gene Set 0.01595 71 0.04231 161 Neighborhood of HEAB www.broad.mit.e...
Broad GNF2_CCNA2 View Gene Set 0.01667 62 0.04393 162 Neighborhood of CCNA2 www.broad.mit.e...
Broad GCM_BCL2L1 View Gene Set 0.01747 25 0.04509 163 Neighborhood of BCL2L1 www.broad.mit.e...
Broad GCM_IL6ST View Gene Set 0.01733 48 0.04509 163 Neighborhood of IL6ST www.broad.mit.e...
Broad GNF2_XRCC5 View Gene Set 0.01738 61 0.04509 163 Neighborhood of XRCC5 www.broad.mit.e...
Broad GNF2_TTK View Gene Set 0.01753 34 0.04509 163 Neighborhood of TTK www.broad.mit.e...
Broad GCM_RAD21 View Gene Set 0.01791 30 0.04579 167 Neighborhood of RAD21 www.broad.mit.e...
Broad GCM_DFFA View Gene Set 0.01846 100 0.04691 168 Neighborhood of DFFA www.broad.mit.e...
Broad MORF_DAP View Gene Set 0.01978 72 0.04965 169 Neighborhood of DAP www.broad.mit.e...
Broad GCM_DLG1 View Gene Set 0.01988 63 0.04965 169 Neighborhood of DLG1 www.broad.mit.e...
Broad GNF2_CKS2 View Gene Set 0.01966 45 0.04965 169 Neighborhood of CKS2 www.broad.mit.e...
Broad GCM_NPM1 View Gene Set 0.02007 108 0.04982 172 Neighborhood of NPM1 www.broad.mit.e...

Gene Set Collection: Broad.c4.CM

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad module_3 View Gene Set 1.783e-20 374 8.097e-18 1 Genes in module_3 www.broad.mit.e...
Broad module_17 View Gene Set 2.03e-14 351 4.609e-12 2 Genes in module_17 www.broad.mit.e...
Broad module_18 View Gene Set 1.168e-12 434 1.767e-10 3 Genes in module_18 www.broad.mit.e...
Broad module_8 View Gene Set 3.063e-11 403 3.374e-09 4 Genes in module_8 www.broad.mit.e...
Broad module_54 View Gene Set 3.716e-11 242 3.374e-09 4 Genes in module_54 www.broad.mit.e...
Broad module_52 View Gene Set 2.479e-10 415 1.608e-08 6 Genes in module_52 www.broad.mit.e...
Broad module_126 View Gene Set 2.475e-10 173 1.608e-08 6 Genes in module_126 www.broad.mit.e...
Broad module_198 View Gene Set 5.291e-09 288 3.003e-07 8 Genes in module_198 www.broad.mit.e...
Broad module_321 View Gene Set 1.746e-08 107 8.806e-07 9 Genes in module_321 www.broad.mit.e...
Broad module_105 View Gene Set 7.741e-08 192 3.514e-06 10 Genes in module_105 www.broad.mit.e...
Broad module_98 View Gene Set 1.266e-07 375 5.226e-06 11 Genes in module_98 www.broad.mit.e...
Broad module_151 View Gene Set 2.224e-07 297 8.416e-06 12 Genes in module_151 www.broad.mit.e...
Broad module_114 View Gene Set 4.968e-07 314 1.735e-05 13 Genes in module_114 www.broad.mit.e...
Broad module_159 View Gene Set 9.928e-07 81 3.22e-05 14 Genes in module_159 www.broad.mit.e...
Broad module_252 View Gene Set 1.797e-06 224 5.438e-05 15 Genes in module_252 www.broad.mit.e...
Broad module_15 View Gene Set 2.099e-06 347 5.606e-05 16 Genes in module_15 www.broad.mit.e...
Broad module_61 View Gene Set 1.991e-06 50 5.606e-05 16 Genes in module_61 www.broad.mit.e...
Broad module_83 View Gene Set 3.332e-06 296 8.404e-05 18 Genes in module_83 www.broad.mit.e...
Broad module_118 View Gene Set 1.031e-05 393 0.0002464 19 Genes in module_118 www.broad.mit.e...
Broad module_357 View Gene Set 1.511e-05 78 0.0003429 20 Genes in module_357 www.broad.mit.e...
Broad module_219 View Gene Set 1.853e-05 26 0.0004006 21 Genes in module_219 www.broad.mit.e...
Broad module_5 View Gene Set 2.199e-05 420 0.0004537 22 Genes in module_5 www.broad.mit.e...
Broad module_144 View Gene Set 2.698e-05 8 0.0005326 23 Genes in module_144 www.broad.mit.e...
Broad module_155 View Gene Set 3.204e-05 25 0.0005478 24 Genes in module_155 www.broad.mit.e...
Broad module_223 View Gene Set 3.379e-05 140 0.0005478 24 Genes in module_223 www.broad.mit.e...
Broad module_297 View Gene Set 3.282e-05 78 0.0005478 24 Genes in module_297 www.broad.mit.e...
Broad module_503 View Gene Set 3.3e-05 106 0.0005478 24 Genes in module_503 www.broad.mit.e...
Broad module_576 View Gene Set 3.066e-05 104 0.0005478 24 Genes in module_576 www.broad.mit.e...
Broad module_86 View Gene Set 5.397e-05 43 0.0008449 29 Genes in module_86 www.broad.mit.e...
Broad module_32 View Gene Set 7.299e-05 227 0.001088 30 Genes in module_32 www.broad.mit.e...
Broad module_212 View Gene Set 7.431e-05 316 0.001088 30 Genes in module_212 www.broad.mit.e...
Broad module_102 View Gene Set 7.972e-05 18 0.001097 32 Genes in module_102 www.broad.mit.e...
Broad module_397 View Gene Set 7.908e-05 114 0.001097 32 Genes in module_397 www.broad.mit.e...
Broad module_72 View Gene Set 8.626e-05 293 0.001152 34 Genes in module_72 www.broad.mit.e...
Broad module_154 View Gene Set 0.0001661 73 0.002069 35 Genes in module_154 www.broad.mit.e...
Broad module_177 View Gene Set 0.0001686 101 0.002069 35 Genes in module_177 www.broad.mit.e...
Broad module_245 View Gene Set 0.0001661 26 0.002069 35 Genes in module_245 www.broad.mit.e...
Broad module_1 View Gene Set 0.0001968 355 0.002352 38 Genes in module_1 www.broad.mit.e...
Broad module_312 View Gene Set 0.0002194 45 0.002554 39 Genes in module_312 www.broad.mit.e...
Broad module_36 View Gene Set 0.0004153 146 0.004714 40 Genes in module_36 www.broad.mit.e...
Broad module_121 View Gene Set 0.0004472 98 0.004952 41 Genes in module_121 www.broad.mit.e...
Broad module_124 View Gene Set 0.0004595 92 0.004967 42 Genes in module_124 www.broad.mit.e...
Broad module_152 View Gene Set 0.0005548 121 0.005761 43 Genes in module_152 www.broad.mit.e...
Broad module_293 View Gene Set 0.0005584 12 0.005761 43 Genes in module_293 www.broad.mit.e...
Broad module_516 View Gene Set 0.0005789 16 0.00584 45 Genes in module_516 www.broad.mit.e...
Broad module_568 View Gene Set 0.0006197 70 0.006116 46 Genes in module_568 www.broad.mit.e...
Broad module_197 View Gene Set 0.0007056 170 0.006816 47 Genes in module_197 www.broad.mit.e...
Broad module_53 View Gene Set 0.000748 389 0.006875 48 Genes in module_53 www.broad.mit.e...
Broad module_254 View Gene Set 0.0007411 58 0.006875 48 Genes in module_254 www.broad.mit.e...
Broad module_392 View Gene Set 0.0007571 18 0.006875 48 Genes in module_392 www.broad.mit.e...
Broad module_356 View Gene Set 0.0008077 141 0.00719 51 Genes in module_356 www.broad.mit.e...
Broad module_16 View Gene Set 0.0008238 495 0.007193 52 Genes in module_16 www.broad.mit.e...
Broad module_567 View Gene Set 0.0008802 90 0.00754 53 Genes in module_567 www.broad.mit.e...
Broad module_195 View Gene Set 0.001162 138 0.009626 54 Genes in module_195 www.broad.mit.e...
Broad module_444 View Gene Set 0.001166 18 0.009626 54 Genes in module_444 www.broad.mit.e...
Broad module_56 View Gene Set 0.001221 12 0.009898 56 Genes in module_56 www.broad.mit.e...
Broad module_2 View Gene Set 0.001369 373 0.01091 57 Genes in module_2 www.broad.mit.e...
Broad module_21 View Gene Set 0.001556 10 0.01218 58 Genes in module_21 www.broad.mit.e...
Broad module_182 View Gene Set 0.001706 94 0.01313 59 Genes in module_182 www.broad.mit.e...
Broad module_537 View Gene Set 0.001736 17 0.01313 60 Genes in module_537 www.broad.mit.e...
Broad module_244 View Gene Set 0.001842 182 0.01371 61 Genes in module_244 www.broad.mit.e...
Broad module_97 View Gene Set 0.001881 91 0.01377 62 Genes in module_97 www.broad.mit.e...
Broad module_457 View Gene Set 0.001916 9 0.0138 63 Genes in module_457 www.broad.mit.e...
Broad module_6 View Gene Set 0.002187 403 0.01552 64 Genes in module_6 www.broad.mit.e...
Broad module_491 View Gene Set 0.002342 74 0.01636 65 Genes in module_491 www.broad.mit.e...
Broad module_317 View Gene Set 0.002776 377 0.0191 66 Genes in module_317 www.broad.mit.e...
Broad module_524 View Gene Set 0.002821 30 0.01912 67 Genes in module_524 www.broad.mit.e...
Broad module_87 View Gene Set 0.003083 44 0.02029 68 Genes in module_87 www.broad.mit.e...
Broad module_278 View Gene Set 0.003064 34 0.02029 68 Genes in module_278 www.broad.mit.e...
Broad module_143 View Gene Set 0.003357 14 0.02169 70 Genes in module_143 www.broad.mit.e...
Broad module_299 View Gene Set 0.003392 33 0.02169 70 Genes in module_299 www.broad.mit.e...
Broad module_38 View Gene Set 0.003552 453 0.02214 72 Genes in module_38 www.broad.mit.e...
Broad module_412 View Gene Set 0.00356 13 0.02214 72 Genes in module_412 www.broad.mit.e...
Broad module_57 View Gene Set 0.003712 54 0.02278 74 Genes in module_57 www.broad.mit.e...
Broad module_362 View Gene Set 0.004222 21 0.02489 75 Genes in module_362 www.broad.mit.e...
Broad module_378 View Gene Set 0.0042 372 0.02489 75 Genes in module_378 www.broad.mit.e...
Broad module_459 View Gene Set 0.004185 370 0.02489 75 Genes in module_459 www.broad.mit.e...
Broad module_363 View Gene Set 0.004322 48 0.02512 78 Genes in module_363 www.broad.mit.e...
Broad module_403 View Gene Set 0.004371 44 0.02512 78 Genes in module_403 www.broad.mit.e...
Broad module_261 View Gene Set 0.004428 91 0.02513 80 Genes in module_261 www.broad.mit.e...
Broad module_255 View Gene Set 0.004783 386 0.02681 81 Genes in module_255 www.broad.mit.e...
Broad module_147 View Gene Set 0.004994 102 0.02765 82 Genes in module_147 www.broad.mit.e...
Broad module_31 View Gene Set 0.005181 7 0.02834 83 Genes in module_31 www.broad.mit.e...
Broad module_349 View Gene Set 0.005354 17 0.02894 84 Genes in module_349 www.broad.mit.e...
Broad module_275 View Gene Set 0.00548 16 0.02927 85 Genes in module_275 www.broad.mit.e...
Broad module_532 View Gene Set 0.005678 346 0.02997 86 Genes in module_532 www.broad.mit.e...
Broad module_419 View Gene Set 0.005873 34 0.03065 87 Genes in module_419 www.broad.mit.e...
Broad module_439 View Gene Set 0.006055 20 0.03124 88 Genes in module_439 www.broad.mit.e...
Broad module_178 View Gene Set 0.007306 17 0.03685 89 Genes in module_178 www.broad.mit.e...
Broad module_179 View Gene Set 0.00729 404 0.03685 89 Genes in module_179 www.broad.mit.e...
Broad module_82 View Gene Set 0.007401 24 0.03692 91 Genes in module_82 www.broad.mit.e...
Broad module_337 View Gene Set 0.007859 59 0.03878 92 Genes in module_337 www.broad.mit.e...
Broad module_127 View Gene Set 0.008708 26 0.04251 93 Genes in module_127 www.broad.mit.e...
Broad module_323 View Gene Set 0.008937 54 0.04316 94 Genes in module_323 www.broad.mit.e...
Broad module_19 View Gene Set 0.009409 306 0.04497 95 Genes in module_19 www.broad.mit.e...
Broad module_192 View Gene Set 0.009555 100 0.04519 96 Genes in module_192 www.broad.mit.e...
Broad module_291 View Gene Set 0.01006 63 0.04711 97 Genes in module_291 www.broad.mit.e...

Gene Set Collection: Broad.c5.BP

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad ORGANELLE_ORGANIZATION_AND_BIOGENESIS View Gene Set 1.513e-08 458 1.249e-05 1 Genes annotated by the GO term GO:0006996. A process that is carried out at the cellular level which results in the formation arrangement of constituent parts or disassembly of any organelle within a cell. www.broad.mit.e...
Broad BIOPOLYMER_METABOLIC_PROCESS View Gene Set 1.837e-07 1623 7.576e-05 2 Genes annotated by the GO term GO:0043283. The chemical reactions and pathways involving biopolymers long repeating chains of monomers found in nature e.g. polysaccharides and proteins. www.broad.mit.e...
Broad NUCLEOBASENUCLEOSIDENUCLEOTIDE_AND_NUCLEIC_ACID_METABOLIC_PROCESS View Gene Set 1.567e-06 1197 0.0003233 3 Genes annotated by the GO term GO:0006139. The chemical reactions and pathways involving nucleobases nucleosides nucleotides and nucleic acids. www.broad.mit.e...
Broad CHROMOSOME_ORGANIZATION_AND_BIOGENESIS View Gene Set 1.314e-06 117 0.0003233 3 Genes annotated by the GO term GO:0051276. A process that is carried out at the cellular level that results in the formation arrangement of constituent parts or disassembly of chromosomes structures composed of a very long molecule of DNA and associated proteins that carries hereditary information. www.broad.mit.e...
Broad CELLULAR_PROTEIN_METABOLIC_PROCESS View Gene Set 8.291e-06 1085 0.001319 5 Genes annotated by the GO term GO:0044267. The chemical reactions and pathways involving a specific protein rather than of proteins in general occurring at the level of an individual cell. Includes protein modification. www.broad.mit.e...
Broad PROTEIN_METABOLIC_PROCESS View Gene Set 9.595e-06 1198 0.001319 5 Genes annotated by the GO term GO:0019538. The chemical reactions and pathways involving a specific protein rather than of proteins in general. Includes protein modification. www.broad.mit.e...
Broad CELLULAR_MACROMOLECULE_METABOLIC_PROCESS View Gene Set 1.234e-05 1099 0.001455 7 Genes annotated by the GO term GO:0044260. The chemical reactions and pathways involving macromolecules large molecules including proteins nucleic acids and carbohydrates as carried out by individual cells. www.broad.mit.e...
Broad ESTABLISHMENT_AND_OR_MAINTENANCE_OF_CHROMATIN_ARCHITECTURE View Gene Set 3.073e-05 72 0.003169 8 Genes annotated by the GO term GO:0006325. The specification formation and maintenance of the physical structure of eukaryotic chromatin. www.broad.mit.e...
Broad COFACTOR_METABOLIC_PROCESS View Gene Set 5.275e-05 53 0.004835 9 Genes annotated by the GO term GO:0051186. The chemical reactions and pathways involving a cofactor a substance that is required for the activity of an enzyme or other protein. Cofactors may be inorganic such as the metal atoms zinc iron and copper in certain forms or organic in which case they are referred to as coenzymes. Cofactors may either be bound tightly to active sites or bind loosely with the substrate. www.broad.mit.e...
Broad RIBONUCLEOPROTEIN_COMPLEX_BIOGENESIS_AND_ASSEMBLY View Gene Set 6.806e-05 74 0.005615 10 Genes annotated by the GO term GO:0022613. The cellular process by which a complex containing RNA and proteins is synthesized aggregates and bonds together. www.broad.mit.e...
Broad REGULATION_OF_CYTOSKELETON_ORGANIZATION_AND_BIOGENESIS View Gene Set 0.0001209 29 0.009064 11 Genes annotated by the GO term GO:0051493. Any process that modulates the frequency rate or extent of the formation arrangement of constituent parts or disassembly of cytoskeletal structures. www.broad.mit.e...
Broad COENZYME_METABOLIC_PROCESS View Gene Set 0.000201 37 0.01382 12 Genes annotated by the GO term GO:0006732. The chemical reactions and pathways involving coenzymes any of various nonprotein organic cofactors that are required in addition to an enzyme and a substrate for an enzymatic reaction to proceed. www.broad.mit.e...
Broad DNA_METABOLIC_PROCESS View Gene Set 0.0002659 253 0.01687 13 Genes annotated by the GO term GO:0006259. The chemical reactions and pathways involving DNA deoxyribonucleic acid one of the two main types of nucleic acid consisting of a long unbranched macromolecule formed from one or more commonly two strands of linked deoxyribonucleotides. www.broad.mit.e...
Broad MITOTIC_CELL_CYCLE View Gene Set 0.0003421 148 0.01881 14 Genes annotated by the GO term GO:0000278. Progression through the phases of the mitotic cell cycle the most common eukaryotic cell cycle which canonically comprises four successive phases called G1 S G2 and M and includes replication of the genome and the subsequent segregation of chromosomes into daughter cells. In some variant cell cycles nuclear replication or nuclear division may not be followed by cell division or G1 and G2 phases may be absent. www.broad.mit.e...
Broad REGULATION_OF_ORGANELLE_ORGANIZATION_AND_BIOGENESIS View Gene Set 0.0003284 39 0.01881 14 Genes annotated by the GO term GO:0033043. Any process that modulates the frequency rate or extent of the processes involved in the formation arrangement of constituent parts or disassembly of an organelle. www.broad.mit.e...
Broad CHROMATIN_MODIFICATION View Gene Set 0.0004111 50 0.02119 16 Genes annotated by the GO term GO:0016568. The alteration of DNA or protein in chromatin which may result in changing the chromatin structure. www.broad.mit.e...
Broad NEGATIVE_REGULATION_OF_CELLULAR_PROCESS View Gene Set 0.0005901 629 0.02864 17 Genes annotated by the GO term GO:0048523. Any process that stops prevents or reduces the frequency rate or extent of cellular processes those that are carried out at the cellular level but are not necessarily restricted to a single cell. For example cell communication occurs among more than one cell but occurs at the cellular level. www.broad.mit.e...
Broad CELL_CYCLE_PROCESS View Gene Set 0.001116 187 0.04929 18 Genes annotated by the GO term GO:0022402. A cellular process that is involved in the progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. www.broad.mit.e...
Broad POSITIVE_REGULATION_OF_CYTOSKELETON_ORGANIZATION_AND_BIOGENESIS View Gene Set 0.001135 10 0.04929 18 Genes annotated by the GO term GO:0051495. Any process that activates or increases the frequency rate or extent of the formation arrangement of constituent parts or disassembly of cytoskeletal structures. www.broad.mit.e...

Gene Set Collection: Broad.c5.CC

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad CYTOPLASM View Gene Set 9.549e-19 2054 2.225e-16 1 Genes annotated by the GO term GO:0005737. All of the contents of a cell excluding the plasma membrane and nucleus but including other subcellular structures. www.broad.mit.e...
Broad NUCLEUS View Gene Set 9.343e-14 1353 1.088e-11 2 Genes annotated by the GO term GO:0005634. A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells the nucleus contains all of the cell's chromosomes except the organellar chromosomes and is the site of RNA synthesis and processing. In some species or in specialized cell types RNA metabolism or DNA replication may be absent. www.broad.mit.e...
Broad ORGANELLE_PART View Gene Set 5.862e-13 1149 3.415e-11 3 Genes annotated by the GO term GO:0044422. Any constituent part of an organelle an organized structure of distinctive morphology and function. Includes constituent parts of the nucleus mitochondria plastids vacuoles vesicles ribosomes and the cytoskeleton but excludes the plasma membrane. www.broad.mit.e...
Broad INTRACELLULAR_ORGANELLE_PART View Gene Set 5.684e-13 1144 3.415e-11 3 Genes annotated by the GO term GO:0044446. A constituent part of an intracellular organelle an organized structure of distinctive morphology and function occurring within the cell. Includes constituent parts of the nucleus mitochondria plastids vacuoles vesicles ribosomes and the cytoskeleton but excludes the plasma membrane. www.broad.mit.e...
Broad CYTOPLASMIC_PART View Gene Set 1.019e-11 1350 4.75e-10 5 Genes annotated by the GO term GO:0044444. Any constituent part of the cytoplasm all of the contents of a cell excluding the plasma membrane and nucleus but including other subcellular structures. www.broad.mit.e...
Broad NUCLEAR_PART View Gene Set 3.73e-10 543 1.449e-08 6 Genes annotated by the GO term GO:0044428. Any constituent part of the nucleus a membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. www.broad.mit.e...
Broad MITOCHONDRION View Gene Set 6.247e-09 335 2.079e-07 7 Genes annotated by the GO term GO:0005739. A semiautonomous self replicating organelle that occurs in varying numbers shapes and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration. www.broad.mit.e...
Broad NON_MEMBRANE_BOUND_ORGANELLE View Gene Set 3.569e-08 613 9.241e-07 8 Genes annotated by the GO term GO:0043228. Organized structure of distinctive morphology and function not bounded by a lipid bilayer membrane. Includes ribosomes the cytoskeleton and chromosomes. www.broad.mit.e...
Broad INTRACELLULAR_NON_MEMBRANE_BOUND_ORGANELLE View Gene Set 3.569e-08 613 9.241e-07 8 Genes annotated by the GO term GO:0043232. Organized structure of distinctive morphology and function not bounded by a lipid bilayer membrane and occurring within the cell. Includes ribosomes the cytoskeleton and chromosomes. www.broad.mit.e...
Broad NUCLEAR_LUMEN View Gene Set 3.5e-06 365 8.155e-05 10 Genes annotated by the GO term GO:0031981. The volume enclosed by the nuclear inner membrane. www.broad.mit.e...
Broad NUCLEOLUS View Gene Set 4.172e-06 116 8.838e-05 11 Genes annotated by the GO term GO:0005730. A small dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein is not bounded by a limiting membrane and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA the processing of this RNA into 5.8S 18S and 28S components of ribosomal RNA and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome. www.broad.mit.e...
Broad ORGANELLE_LUMEN View Gene Set 6.636e-06 434 0.0001189 12 Genes annotated by the GO term GO:0043233. The volume enclosed by the membranes of a particular organelle e.g. endoplasmic reticulum lumen or the space between the two lipid bilayers of a double membrane surrounding an organelle e.g. nuclear membrane lumen. www.broad.mit.e...
Broad MEMBRANE_ENCLOSED_LUMEN View Gene Set 6.636e-06 434 0.0001189 12 Genes annotated by the GO term GO:0031974. The enclosed volume within a sealed membrane or between two sealed membranes. www.broad.mit.e...
Broad MACROMOLECULAR_COMPLEX View Gene Set 2.126e-05 914 0.0003539 14 Genes annotated by the GO term GO:0032991. A stable assembly of two or more macromolecules i.e. proteins nucleic acids carbohydrates or lipids in which the constituent parts function together. www.broad.mit.e...
Broad ORGANELLE_MEMBRANE View Gene Set 8.973e-05 290 0.001394 15 Genes annotated by the GO term GO:0031090. The lipid bilayer surrounding an organelle. www.broad.mit.e...
Broad NUCLEOLAR_PART View Gene Set 0.000117 16 0.001704 16 Genes annotated by the GO term GO:0044452. Any constituent part of a nucleolus a small dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein is not bounded by a limiting membrane and is not seen during mitosis. www.broad.mit.e...
Broad ENDOPLASMIC_RETICULUM View Gene Set 0.0003001 282 0.004114 17 Genes annotated by the GO term GO:0005783. The irregular network of unit membranes visible only by electron microscopy that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels which are often expanded into slitlike cavities called cisternae. The ER takes two forms rough (or granular) with ribosomes adhering to the outer surface and smooth (with no ribosomes attached). www.broad.mit.e...
Broad ENVELOPE View Gene Set 0.0004255 165 0.004957 18 Genes annotated by the GO term GO:0031975. A multilayered structure surrounding all or part of a cell; encompasses one or more lipid bilayers and may include a cell wall layer also includes the space between layers. www.broad.mit.e...
Broad ENDOMEMBRANE_SYSTEM View Gene Set 0.0004133 213 0.004957 18 Genes annotated by the GO term GO:0012505. A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum Golgi bodies vesicles cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles. www.broad.mit.e...
Broad ORGANELLE_ENVELOPE View Gene Set 0.0004255 165 0.004957 18 Genes annotated by the GO term GO:0031967. A double membrane structure enclosing an organelle including two lipid bilayers and the region between them. In some cases an organelle envelope may have more than two membranes. www.broad.mit.e...
Broad PROTEIN_COMPLEX View Gene Set 0.0006506 799 0.007218 21 Genes annotated by the GO term GO:0043234. Any protein group composed of two or more subunits which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups such as nucleic acids metal ions or carbohydrate groups. www.broad.mit.e...
Broad CYTOSKELETON View Gene Set 0.001943 359 0.02058 22 Genes annotated by the GO term GO:0005856. Any of the various filamentous elements that form the internal framework of cells and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments microfilaments microtubules the microtrabecular lattice and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions including cellular movement cell division endocytosis and movement of organelles. www.broad.mit.e...
Broad MITOCHONDRIAL_PART View Gene Set 0.003525 140 0.03042 23 Genes annotated by the GO term GO:0044429. Any constituent part of a mitochondrion a semiautonomous self replicating organelle that occurs in varying numbers shapes and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration. www.broad.mit.e...
Broad GOLGI_APPARATUS_PART View Gene Set 0.003325 98 0.03042 23 Genes annotated by the GO term GO:0044431. Any constituent part of the Golgi apparatus a compound membranous cytoplasmic organelle of eukaryotic cells consisting of flattened ribosome-free vesicles arranged in a more or less regular stack. www.broad.mit.e...
Broad CYTOSOL View Gene Set 0.003158 203 0.03042 23 Genes annotated by the GO term GO:0005829. That part of the cytoplasm that does not contain membranous or particulate subcellular components. www.broad.mit.e...
Broad EARLY_ENDOSOME View Gene Set 0.003366 18 0.03042 23 Genes annotated by the GO term GO:0005769. Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered. www.broad.mit.e...
Broad ENDOSOME View Gene Set 0.003434 64 0.03042 23 Genes annotated by the GO term GO:0005768. A membrane-bound organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation. www.broad.mit.e...
Broad RIBONUCLEOPROTEIN_COMPLEX View Gene Set 0.003883 129 0.03231 28 Genes annotated by the GO term GO:0030529. A macromolecular complex containing both protein and RNA molecules. www.broad.mit.e...
Broad MITOCHONDRIAL_ENVELOPE View Gene Set 0.004267 95 0.03429 29 Genes annotated by the GO term GO:0005740. The double lipid bilayer enclosing the mitochondrion and separating its contents from the cell cytoplasm; includes the intermembrane space. www.broad.mit.e...
Broad MITOCHONDRIAL_MEMBRANE View Gene Set 0.005353 85 0.03935 30 Genes annotated by the GO term GO:0031966. Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope. www.broad.mit.e...
Broad FOCAL_ADHESION View Gene Set 0.005404 11 0.03935 30 Genes annotated by the GO term GO:0005925. Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments. www.broad.mit.e...
Broad CHROMOSOME View Gene Set 0.005206 122 0.03935 30 Genes annotated by the GO term GO:0005694. A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information. www.broad.mit.e...
Broad SMALL_NUCLEAR_RIBONUCLEOPROTEIN_COMPLEX View Gene Set 0.006883 20 0.0486 33 Genes annotated by the GO term GO:0030532. A complex composed of RNA of the small nuclear RNA (snRNA) class and protein found in the nucleus of a eukaryotic cell. These are typically named after the snRNA(s) they contain e.g. U1 snRNP or U4/U6 snRNP. Many but not all of these complexes are involved in splicing of nuclear mRNAs. www.broad.mit.e...

Gene Set Collection: Broad.c5.MF

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad LIGASE_ACTIVITY View Gene Set 7.173e-05 97 0.0284 1 Genes annotated by the GO term GO:0016874. Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6. www.broad.mit.e...

Gene Set Collection: PMID

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
PMID 12429849 View Gene Set 1.607e-15 106 2.014e-12 1 Functional proteomic analysis of human nucleolus. www.ncbi.nlm.ni...
PMID 15635413 View Gene Set 8.104e-16 421 2.014e-12 1 Nucleolar proteome dynamics. www.ncbi.nlm.ni...
PMID 11042152 View Gene Set 2.354e-13 315 1.967e-10 3 Cloning and functional analysis of cDNAs with open reading frames for 300 previously undefined genes expressed in CD34+ hematopoietic stem/progenitor cells. www.ncbi.nlm.ni...
PMID 11790298 View Gene Set 5.253e-12 208 3.292e-09 4 Directed proteomic analysis of the human nucleolus. www.ncbi.nlm.ni...
PMID 16964243 View Gene Set 5.159e-10 504 2.587e-07 5 A probability-based approach for high-throughput protein phosphorylation analysis and site localization. www.ncbi.nlm.ni...
PMID 16130169 View Gene Set 4.56e-09 74 1.905e-06 6 Proteomics of human umbilical vein endothelial cells applied to etoposide-induced apoptosis. www.ncbi.nlm.ni...
PMID 10810093 View Gene Set 1.802e-08 151 6.453e-06 7 Identification of novel human genes evolutionarily conserved in Caenorhabditis elegans by comparative proteomics. www.ncbi.nlm.ni...
PMID 16565220 View Gene Set 2.273e-07 210 7.122e-05 8 Phosphoproteome analysis of the human mitotic spindle. www.ncbi.nlm.ni...
PMID 11689053 View Gene Set 7.291e-07 70 0.0002031 9 Enhancement of the p300 HAT activity by HIV-1 Tat on chromatin DNA. www.ncbi.nlm.ni...
PMID 15231747 View Gene Set 9.259e-07 212 0.0002174 10 A protein interaction framework for human mRNA degradation. www.ncbi.nlm.ni...
PMID 16341674 View Gene Set 1.127e-06 392 0.0002174 10 Transcriptome analysis of human gastric cancer. www.ncbi.nlm.ni...
PMID 17643375 View Gene Set 1.026e-06 391 0.0002174 10 Systematic analysis of the protein interaction network for the human transcription machinery reveals the identity of the 7SK capping enzyme. www.ncbi.nlm.ni...
PMID 9439656 View Gene Set 1.105e-06 55 0.0002174 10 The human histone gene cluster at the D6S105 locus. www.ncbi.nlm.ni...
PMID 11080476 View Gene Set 1.491e-06 87 0.000267 14 Acetylation of HIV-1 Tat by CBP/P300 increases transcription of integrated HIV-1 genome and enhances binding to core histones. www.ncbi.nlm.ni...
PMID 12706105 View Gene Set 1.984e-06 182 0.0003316 15 Identification and characterization of over 100 mitochondrial ribosomal protein pseudogenes in the human genome. www.ncbi.nlm.ni...
PMID 9566873 View Gene Set 2.225e-06 74 0.0003486 16 Transcriptional activation of the integrated chromatin-associated human immunodeficiency virus type 1 promoter. www.ncbi.nlm.ni...
PMID 11543634 View Gene Set 2.796e-06 58 0.0003948 17 The human mitochondrial ribosomal protein genes: mapping of 54 genes to the chromosomes and implications for human disorders. www.ncbi.nlm.ni...
PMID 14657027 View Gene Set 2.835e-06 74 0.0003948 17 Regulation of HIV-1 gene expression by histone acetylation and factor recruitment at the LTR promoter. www.ncbi.nlm.ni...
PMID 12408966 View Gene Set 3.351e-06 76 0.0004422 19 The human and mouse replication-dependent histone genes. www.ncbi.nlm.ni...
PMID 15592455 View Gene Set 1.498e-05 317 0.001878 20 Immunoaffinity profiling of tyrosine phosphorylation in cancer cells. www.ncbi.nlm.ni...
PMID 15302935 View Gene Set 2.045e-05 773 0.002442 21 Large-scale characterization of HeLa cell nuclear phosphoproteins. www.ncbi.nlm.ni...
PMID 12665801 View Gene Set 2.76e-05 261 0.003145 22 Exploring proteomes and analyzing protein processing by mass spectrometric identification of sorted N-terminal peptides. www.ncbi.nlm.ni...
PMID 15146197 View Gene Set 5.964e-05 693 0.006501 23 Transcriptome characterization elucidates signaling networks that control human ES cell growth and differentiation. www.ncbi.nlm.ni...
PMID 16916647 View Gene Set 7.665e-05 76 0.008007 24 Substrate and functional diversity of lysine acetylation revealed by a proteomics survey. www.ncbi.nlm.ni...
PMID 12620389 View Gene Set 8.028e-05 23 0.008051 25 Novel raf kinase protein-protein interactions found by an exhaustive yeast two-hybrid analysis. www.ncbi.nlm.ni...
PMID 12391170 View Gene Set 9.863e-05 18 0.009158 26 Characterization of human RNA polymerase III identifies orthologues for Saccharomyces cerevisiae RNA polymerase III subunits. www.ncbi.nlm.ni...
PMID 17466952 View Gene Set 9.649e-05 11 0.009158 26 Role of IKK and ERK pathways in intrinsic inflammation of cystic fibrosis airways. www.ncbi.nlm.ni...
PMID 16120388 View Gene Set 0.0001044 12 0.00935 28 Mitochondrial membrane permeabilization by HIV-1 Vpr. www.ncbi.nlm.ni...
PMID 15761153 View Gene Set 0.0001109 211 0.009589 29 High-throughput mapping of a dynamic signaling network in mammalian cells. www.ncbi.nlm.ni...
PMID 17041588 View Gene Set 0.0001171 19 0.009782 30 CUL4-DDB1 ubiquitin ligase interacts with multiple WD40-repeat proteins and regulates histone methylation. www.ncbi.nlm.ni...
PMID 11721045 View Gene Set 0.0001338 10 0.01082 31 Crystal structure of Arp2/3 complex. www.ncbi.nlm.ni...
PMID 16236267 View Gene Set 0.0001502 77 0.01176 32 Proteomic analysis of SUMO4 substrates in HEK293 cells under serum starvation-induced stress. www.ncbi.nlm.ni...
PMID 11076961 View Gene Set 0.0001694 14 0.01249 33 Characterization of vertebrate cohesin complexes and their regulation in prophase. www.ncbi.nlm.ni...
PMID 16381901 View Gene Set 0.0001653 720 0.01249 33 The LIFEdb database in 2006. www.ncbi.nlm.ni...
PMID 15489336 View Gene Set 0.0001791 722 0.01283 35 From ORFeome to biology: a functional genomics pipeline. www.ncbi.nlm.ni...
PMID 14519844 View Gene Set 0.0001954 17 0.01309 36 Divergent retroviral late-budding domains recruit vacuolar protein sorting factors by using alternative adaptor proteins. www.ncbi.nlm.ni...
PMID 19027726 View Gene Set 0.0001939 73 0.01309 36 The SDR (short-chain dehydrogenase/reductase and related enzymes) nomenclature initiative. www.ncbi.nlm.ni...
PMID 19710015 View Gene Set 0.0001984 48 0.01309 36 The metastasis efficiency modifier ribosomal RNA processing 1 homolog B (RRP1B) is a chromatin-associated factor. www.ncbi.nlm.ni...
PMID 1916825 View Gene Set 0.0002092 13 0.01345 39 Isolation and characterization of two human H1 histone genes within clusters of core histone genes. www.ncbi.nlm.ni...
PMID 17540176 View Gene Set 0.0002231 28 0.01398 40 The tumor suppressor PP2A Abeta regulates the RalA GTPase. www.ncbi.nlm.ni...
PMID 12963728 View Gene Set 0.0002479 21 0.01516 41 Identification of new subunits of the multiprotein mammalian TRRAP/TIP60-containing histone acetyltransferase complex. www.ncbi.nlm.ni...
PMID 16697956 View Gene Set 0.0002547 13 0.0152 42 Mitochondria primed by death signals determine cellular addiction to antiapoptotic BCL-2 family members. www.ncbi.nlm.ni...
PMID 15231748 View Gene Set 0.0002954 519 0.01722 43 Functional proteomics mapping of a human signaling pathway. www.ncbi.nlm.ni...
PMID 16627869 View Gene Set 0.0003024 17 0.01723 44 Quantitative proteomic analysis of post-translational modifications of human histones. www.ncbi.nlm.ni...
PMID 15952740 View Gene Set 0.0003164 58 0.01763 45 Protein profiling of human pancreatic islets by two-dimensional gel electrophoresis and mass spectrometry. www.ncbi.nlm.ni...
PMID 11256614 View Gene Set 0.0003295 522 0.01796 46 Systematic subcellular localization of novel proteins identified by large-scale cDNA sequencing. www.ncbi.nlm.ni...
PMID 15694340 View Gene Set 0.0004528 15 0.02415 47 Differential targeting of prosurvival Bcl-2 proteins by their BH3-only ligands allows complementary apoptotic function. www.ncbi.nlm.ni...
PMID 1403646 View Gene Set 0.0004646 17 0.02426 48 The human immunodeficiency virus tat protein increases the transcription of human Alu repeated sequences by increasing the activity of the cellular transcription factor TFIIIC. www.ncbi.nlm.ni...
PMID 16319397 View Gene Set 0.000551 20 0.02607 49 Characterization of histone H2A and H2B variants and their post-translational modifications by mass spectrometry. www.ncbi.nlm.ni...
PMID 16713563 View Gene Set 0.000535 19 0.02607 49 Histone H2B monoubiquitination functions cooperatively with FACT to regulate elongation by RNA polymerase II. www.ncbi.nlm.ni...
PMID 19571811 View Gene Set 0.0005467 15 0.02607 49 Common polygenic variation contributes to risk of schizophrenia and bipolar disorder. www.ncbi.nlm.ni...
PMID 20085707 View Gene Set 0.0005189 42 0.02607 49 Aire's partners in the molecular control of immunological tolerance. www.ncbi.nlm.ni...
PMID 9119399 View Gene Set 0.000522 35 0.02607 49 Human histone gene organization: nonregular arrangement within a large cluster. www.ncbi.nlm.ni...
PMID 19738611 View Gene Set 0.0005672 39 0.02633 54 Cell cycle genes and ovarian cancer susceptibility: a tagSNP analysis. www.ncbi.nlm.ni...
PMID 20508983 View Gene Set 0.000712 102 0.03246 55 Centrosome-related genes genetic variation and risk of breast cancer. www.ncbi.nlm.ni...
PMID 12757711 View Gene Set 0.0007805 18 0.03494 56 Apoptotic phosphorylation of histone H2B is mediated by mammalian sterile twenty kinase. www.ncbi.nlm.ni...
PMID 16303743 View Gene Set 0.0008343 427 0.03669 57 Signal sequence and keyword trap in silico for selection of full-length human cDNAs encoding secretion or membrane proteins from oligo-capped cDNA libraries. www.ncbi.nlm.ni...
PMID 18063578 View Gene Set 0.0009013 31 0.03896 58 The layered structure of human mitochondrial DNA nucleoids. www.ncbi.nlm.ni...
PMID 11551941 View Gene Set 0.0009501 26 0.04037 59 The large subunit of the mammalian mitochondrial ribosome. Analysis of the complement of ribosomal proteins present. www.ncbi.nlm.ni...
PMID 12221128 View Gene Set 0.001049 70 0.04246 60 Centrosomal proteins CG-NAP and kendrin provide microtubule nucleation sites by anchoring gamma-tubulin ring complex. www.ncbi.nlm.ni...
PMID 15725353 View Gene Set 0.001032 21 0.04246 60 The Vpr protein from HIV-1: distinct roles along the viral life cycle. www.ncbi.nlm.ni...
PMID 17620599 View Gene Set 0.00105 14 0.04246 60 Functional specialization of beta-arrestin interactions revealed by proteomic analysis. www.ncbi.nlm.ni...

Gene Set Collection: ChromosomalTiles5Mb

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null chr14_57.5-62.5Mb View Gene Set 4.621e-05 23 0.03035 1 Genomic tile: chr14 ; 57500001-62500001 Mb genome.ucsc.edu...
Null chr19_10-15Mb View Gene Set 5.449e-05 87 0.03035 1 Genomic tile: chr19 ; 10000001-15000001 Mb genome.ucsc.edu...

Gene Set Collection: ppi.BIND

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null ppi.CDKN1A View Gene Set 0.0001767 9 0.02326 1 Protein-protein-interaction for CDKN1A www.ncbi.nlm.ni...
Null ppi.RB1 View Gene Set 0.0002462 44 0.02326 1 Protein-protein-interaction for RB1 www.ncbi.nlm.ni...

Gene Set Collection: ppi.BioGRID

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null ppi.155871 View Gene Set 2.3e-07 236 0.0005284 1 Protein-protein-interaction for 155871 www.ncbi.nlm.ni...
Null ppi.TP53 View Gene Set 5.047e-06 168 0.005797 2 Protein-protein-interaction for TP53 www.ncbi.nlm.ni...
Null ppi.SIN3A View Gene Set 1.626e-05 104 0.01245 3 Protein-protein-interaction for SIN3A www.ncbi.nlm.ni...
Null ppi.FAM107A View Gene Set 0.0001056 10 0.04851 4 Protein-protein-interaction for FAM107A www.ncbi.nlm.ni...
Null ppi.USP32 View Gene Set 0.0001032 18 0.04851 4 Protein-protein-interaction for USP32 www.ncbi.nlm.ni...
Null ppi.HGS View Gene Set 0.0001288 46 0.04931 6 Protein-protein-interaction for HGS www.ncbi.nlm.ni...

Gene Set Collection: ppi.HPRD

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null ppi.TP53 View Gene Set 7.696e-06 166 0.01827 1 Protein-protein-interaction for TP53 www.ncbi.nlm.ni...
Null ppi.PTMA View Gene Set 2.711e-05 18 0.03218 2 Protein-protein-interaction for PTMA www.ncbi.nlm.ni...

Gene Set Collection: ppi.anyDB

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null ppi.TP53 View Gene Set 1.489e-07 220 0.0005353 1 Protein-protein-interaction for TP53 www.ncbi.nlm.ni...
Null ppi.155871 View Gene Set 3.584e-07 251 0.000644 2 Protein-protein-interaction for 155871 www.ncbi.nlm.ni...
Null ppi.PTMA View Gene Set 1.085e-05 21 0.013 3 Protein-protein-interaction for PTMA www.ncbi.nlm.ni...
Null ppi.SH3D19 View Gene Set 7.235e-05 12 0.03757 4 Protein-protein-interaction for SH3D19 www.ncbi.nlm.ni...
Null ppi.SIN3A View Gene Set 7.318e-05 116 0.03757 4 Protein-protein-interaction for SIN3A www.ncbi.nlm.ni...
Null ppi.SUMO4 View Gene Set 6.321e-05 76 0.03757 4 Protein-protein-interaction for SUMO4 www.ncbi.nlm.ni...
Null ppi.GEMIN4 View Gene Set 6.116e-05 29 0.03757 4 Protein-protein-interaction for GEMIN4 www.ncbi.nlm.ni...
Null ppi.FAM107A View Gene Set 0.0001082 11 0.04321 8 Protein-protein-interaction for FAM107A www.ncbi.nlm.ni...
Null ppi.USP32 View Gene Set 0.0001032 18 0.04321 8 Protein-protein-interaction for USP32 www.ncbi.nlm.ni...

Gene Set Collection: pathwayCommons.cell-map

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null EGFR1 View Gene Set 0.0001358 137 0.001358 1 CELL_MAP - EGFR1 gene set www.pathwaycomm...
Null TNF alpha/NF-kB View Gene Set 0.003276 170 0.01092 2 CELL_MAP - TNF alpha/NF-kB gene set www.pathwaycomm...
Null TGFBR View Gene Set 0.003234 124 0.01092 2 CELL_MAP - TGFBR gene set www.pathwaycomm...
Null AndrogenReceptor View Gene Set 0.007767 78 0.01942 4 CELL_MAP - AndrogenReceptor gene set www.pathwaycomm...

Gene Set Collection: pathwayCommons.nci-nature

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null ErbB1 downstream signaling View Gene Set 6.035e-10 812 3.742e-08 1 NCI_NATURE - ErbB1 downstream signaling gene set www.pathwaycomm...
Null EGF receptor (ErbB1) signaling pathway View Gene Set 6.035e-10 812 3.742e-08 1 NCI_NATURE - EGF receptor (ErbB1) signaling pathway gene set www.pathwaycomm...
Null Internalization of ErbB1 View Gene Set 6.035e-10 812 3.742e-08 1 NCI_NATURE - Internalization of ErbB1 gene set www.pathwaycomm...
Null Proteogylcan syndecan-mediated signaling events View Gene Set 1.118e-09 875 5.003e-08 4 NCI_NATURE - Proteogylcan syndecan-mediated signaling events gene set www.pathwaycomm...
Null ErbB receptor signaling network View Gene Set 1.345e-09 841 5.003e-08 4 NCI_NATURE - ErbB receptor signaling network gene set www.pathwaycomm...
Null Glypican pathway View Gene Set 1.055e-08 937 3.27e-07 6 NCI_NATURE - Glypican pathway gene set www.pathwaycomm...
Null Glypican 1 network View Gene Set 1.271e-08 796 3.377e-07 7 NCI_NATURE - Glypican 1 network gene set www.pathwaycomm...
Null Validated targets of C-MYC transcriptional activation View Gene Set 1.058e-07 80 1.79e-06 8 NCI_NATURE - Validated targets of C-MYC transcriptional activation gene set www.pathwaycomm...
Null TRAIL signaling pathway View Gene Set 1.038e-07 686 1.79e-06 8 NCI_NATURE - TRAIL signaling pathway gene set www.pathwaycomm...
Null C-MYC pathway View Gene Set 8.785e-08 149 1.79e-06 8 NCI_NATURE - C-MYC pathway gene set www.pathwaycomm...
Null Syndecan-1-mediated signaling events View Gene Set 9.702e-08 688 1.79e-06 8 NCI_NATURE - Syndecan-1-mediated signaling events gene set www.pathwaycomm...
Null Signaling events mediated by Hepatocyte Growth Factor Receptor (c-Met) View Gene Set 1.372e-07 677 2.126e-06 12 NCI_NATURE - Signaling events mediated by Hepatocyte Growth Factor Receptor (c-Met) gene set www.pathwaycomm...
Null Signaling events mediated by focal adhesion kinase View Gene Set 7.379e-07 660 1.056e-05 13 NCI_NATURE - Signaling events mediated by focal adhesion kinase gene set www.pathwaycomm...
Null Class I PI3K signaling events View Gene Set 1.983e-06 632 2.634e-05 14 NCI_NATURE - Class I PI3K signaling events gene set www.pathwaycomm...
Null Class I PI3K signaling events mediated by Akt View Gene Set 5.252e-06 532 6.512e-05 15 NCI_NATURE - Class I PI3K signaling events mediated by Akt gene set www.pathwaycomm...
Null TGF-beta receptor signaling View Gene Set 1.283e-05 306 0.0001289 16 NCI_NATURE - TGF-beta receptor signaling gene set www.pathwaycomm...
Null Regulation of nuclear SMAD2/3 signaling View Gene Set 1.283e-05 306 0.0001289 16 NCI_NATURE - Regulation of nuclear SMAD2/3 signaling gene set www.pathwaycomm...
Null Regulation of cytoplasmic and nuclear SMAD2/3 signaling View Gene Set 1.283e-05 306 0.0001289 16 NCI_NATURE - Regulation of cytoplasmic and nuclear SMAD2/3 signaling gene set www.pathwaycomm...
Null IFN-gamma pathway View Gene Set 1.317e-05 590 0.0001289 16 NCI_NATURE - IFN-gamma pathway gene set www.pathwaycomm...
Null p53 pathway View Gene Set 1.719e-05 190 0.0001598 20 NCI_NATURE - p53 pathway gene set www.pathwaycomm...
Null ALK1 signaling events View Gene Set 2.895e-05 322 0.0002564 21 NCI_NATURE - ALK1 signaling events gene set www.pathwaycomm...
Null Signaling mediated by p38-alpha and p38-beta View Gene Set 3.214e-05 50 0.0002717 22 NCI_NATURE - Signaling mediated by p38-alpha and p38-beta gene set www.pathwaycomm...
Null ALK1 pathway View Gene Set 3.693e-05 324 0.0002986 23 NCI_NATURE - ALK1 pathway gene set www.pathwaycomm...
Null Direct p53 effectors View Gene Set 8.276e-05 139 0.0006414 24 NCI_NATURE - Direct p53 effectors gene set www.pathwaycomm...
Null IL1-mediated signaling events View Gene Set 0.0002539 234 0.001889 25 NCI_NATURE - IL1-mediated signaling events gene set www.pathwaycomm...
Null Syndecan-4-mediated signaling events View Gene Set 0.0003162 212 0.002262 26 NCI_NATURE - Syndecan-4-mediated signaling events gene set www.pathwaycomm...
Null TNF receptor signaling pathway View Gene Set 0.0003363 299 0.002317 27 NCI_NATURE - TNF receptor signaling pathway gene set www.pathwaycomm...
Null LKB1 signaling events View Gene Set 0.0007753 372 0.00515 28 NCI_NATURE - LKB1 signaling events gene set www.pathwaycomm...
Null Regulation of Telomerase View Gene Set 0.0008927 68 0.005725 29 NCI_NATURE - Regulation of Telomerase gene set www.pathwaycomm...
Null Regulation of p38-alpha and p38-beta View Gene Set 0.001181 164 0.007323 30 NCI_NATURE - Regulation of p38-alpha and p38-beta gene set www.pathwaycomm...
Null Endothelins View Gene Set 0.001804 439 0.01082 31 NCI_NATURE - Endothelins gene set www.pathwaycomm...
Null p38 MAPK signaling pathway View Gene Set 0.002445 189 0.01378 32 NCI_NATURE - p38 MAPK signaling pathway gene set www.pathwaycomm...
Null p75(NTR)-mediated signaling View Gene Set 0.002391 180 0.01378 32 NCI_NATURE - p75(NTR)-mediated signaling gene set www.pathwaycomm...
Null CDC42 signaling events View Gene Set 0.002899 219 0.01586 34 NCI_NATURE - CDC42 signaling events gene set www.pathwaycomm...
Null EGFR-dependent Endothelin signaling events View Gene Set 0.003239 345 0.01721 35 NCI_NATURE - EGFR-dependent Endothelin signaling events gene set www.pathwaycomm...
Null FoxO family signaling View Gene Set 0.003632 49 0.01778 36 NCI_NATURE - FoxO family signaling gene set www.pathwaycomm...
Null mTOR signaling pathway View Gene Set 0.003622 343 0.01778 36 NCI_NATURE - mTOR signaling pathway gene set www.pathwaycomm...
Null a6b1 and a6b4 Integrin signaling View Gene Set 0.003509 44 0.01778 36 NCI_NATURE - a6b1 and a6b4 Integrin signaling gene set www.pathwaycomm...
Null Noncanonical Wnt signaling pathway View Gene Set 0.003791 185 0.01808 39 NCI_NATURE - Noncanonical Wnt signaling pathway gene set www.pathwaycomm...
Null BMP receptor signaling View Gene Set 0.005599 226 0.02604 40 NCI_NATURE - BMP receptor signaling gene set www.pathwaycomm...
Null Regulation of CDC42 activity View Gene Set 0.005828 231 0.02644 41 NCI_NATURE - Regulation of CDC42 activity gene set www.pathwaycomm...
Null Validated targets of C-MYC transcriptional repression View Gene Set 0.00721 64 0.02915 42 NCI_NATURE - Validated targets of C-MYC transcriptional repression gene set www.pathwaycomm...
Null Signaling events mediated by HDAC Class III View Gene Set 0.006981 39 0.02915 42 NCI_NATURE - Signaling events mediated by HDAC Class III gene set www.pathwaycomm...
Null Signaling events mediated by VEGFR1 and VEGFR2 View Gene Set 0.006757 69 0.02915 42 NCI_NATURE - Signaling events mediated by VEGFR1 and VEGFR2 gene set www.pathwaycomm...
Null Glypican 3 network View Gene Set 0.007152 209 0.02915 42 NCI_NATURE - Glypican 3 network gene set www.pathwaycomm...
Null Caspase cascade in apoptosis View Gene Set 0.006965 52 0.02915 42 NCI_NATURE - Caspase cascade in apoptosis gene set www.pathwaycomm...
Null Wnt signaling network View Gene Set 0.00916 203 0.03599 47 NCI_NATURE - Wnt signaling network gene set www.pathwaycomm...
Null BCR signaling pathway View Gene Set 0.009288 67 0.03599 47 NCI_NATURE - BCR signaling pathway gene set www.pathwaycomm...
Null Nectin adhesion pathway View Gene Set 0.009695 126 0.0368 49 NCI_NATURE - Nectin adhesion pathway gene set www.pathwaycomm...
Null Sphingosine 1-phosphate (S1P) pathway View Gene Set 0.01067 138 0.0397 50 NCI_NATURE - Sphingosine 1-phosphate (S1P) pathway gene set www.pathwaycomm...
Null Plasma membrane estrogen receptor signaling View Gene Set 0.01094 297 0.03989 51 NCI_NATURE - Plasma membrane estrogen receptor signaling gene set www.pathwaycomm...

Gene Set Collection: pathwayCommons.reactome

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null Cell Cycle Mitotic View Gene Set 4.88e-07 312 0.0005452 1 REACTOME - Cell Cycle Mitotic gene set www.pathwaycomm... Mitotic&format=...
Null RNA Polymerase I Chain Elongation View Gene Set 8.126e-06 49 0.002269 2 REACTOME - RNA Polymerase I Chain Elongation gene set www.pathwaycomm...
Null G1/S Transition View Gene Set 5.696e-06 104 0.002269 2 REACTOME - G1/S Transition gene set www.pathwaycomm...
Null Mitotic G1-G1/S phases View Gene Set 7.248e-06 113 0.002269 2 REACTOME - Mitotic G1-G1/S phases gene set www.pathwaycomm...
Null RNA Polymerase I RNA Polymerase III and Mitochondrial Transcription View Gene Set 1.148e-05 93 0.002564 5 REACTOME - RNA Polymerase I RNA Polymerase III and Mitochondrial Transcription gene set www.pathwaycomm... RNA Polymerase ... and Mitochondri...
Null RNA Polymerase I Promoter Clearance View Gene Set 1.816e-05 55 0.003381 6 REACTOME - RNA Polymerase I Promoter Clearance gene set www.pathwaycomm...
Null Chromosome Maintenance View Gene Set 2.663e-05 69 0.00425 7 REACTOME - Chromosome Maintenance gene set www.pathwaycomm...
Null Telomere Maintenance View Gene Set 3.546e-05 49 0.004951 8 REACTOME - Telomere Maintenance gene set www.pathwaycomm...
Null Mitotic G2-G2/M phases View Gene Set 6.826e-05 98 0.008472 9 REACTOME - Mitotic G2-G2/M phases gene set www.pathwaycomm...
Null RNA Polymerase I Transcription View Gene Set 8.994e-05 57 0.009133 10 REACTOME - RNA Polymerase I Transcription gene set www.pathwaycomm...
Null G2/M Transition View Gene Set 8.657e-05 96 0.009133 10 REACTOME - G2/M Transition gene set www.pathwaycomm...
Null Transcription View Gene Set 0.0001347 178 0.01254 12 REACTOME - Transcription gene set www.pathwaycomm...
Null Purine metabolism View Gene Set 0.0001545 24 0.01328 13 REACTOME - Purine metabolism gene set www.pathwaycomm...
Null Metabolism of proteins View Gene Set 0.0002129 263 0.01487 14 REACTOME - Metabolism of proteins gene set www.pathwaycomm...
Null S Phase View Gene Set 0.0002118 113 0.01487 14 REACTOME - S Phase gene set www.pathwaycomm...
Null Metabolism of RNA View Gene Set 0.0002094 174 0.01487 14 REACTOME - Metabolism of RNA gene set www.pathwaycomm...
Null RNA Polymerase I Promoter Opening View Gene Set 0.0002545 31 0.01636 17 REACTOME - RNA Polymerase I Promoter Opening gene set www.pathwaycomm...
Null Gene Expression View Gene Set 0.0002637 381 0.01636 17 REACTOME - Gene Expression gene set www.pathwaycomm...
Null Smooth Muscle Contraction View Gene Set 0.000474 24 0.02787 19 REACTOME - Smooth Muscle Contraction gene set www.pathwaycomm...
Null Apoptosis View Gene Set 0.0005133 148 0.02867 20 REACTOME - Apoptosis gene set www.pathwaycomm...
Null Metabolism of nucleotides View Gene Set 0.0005676 66 0.03019 21 REACTOME - Metabolism of nucleotides gene set www.pathwaycomm...
Null Signaling by Robo receptor View Gene Set 0.0006113 23 0.03042 22 REACTOME - Signaling by Robo receptor gene set www.pathwaycomm...
Null Respiratory electron transport View Gene Set 0.0006264 76 0.03042 22 REACTOME - Respiratory electron transport gene set www.pathwaycomm...
Null Destabilization of mRNA by Tristetraprolin (TTP) View Gene Set 0.0009964 18 0.04637 24 REACTOME - Destabilization of mRNA by Tristetraprolin (TTP) gene set www.pathwaycomm...

Gene Set Collection: miranda.targets

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null hsa-miR-548c-3p View Gene Set 3.447e-09 3130 2.333e-06 1 microRNA targets for hsa-miR-548c-3p from miranda.targets www.mirbase.org...
Null hsa-miR-655 View Gene Set 8.908e-08 1858 3.015e-05 2 microRNA targets for hsa-miR-655 from miranda.targets www.mirbase.org...
Null hsa-miR-548i View Gene Set 2.544e-07 2860 5.741e-05 3 microRNA targets for hsa-miR-548i from miranda.targets www.mirbase.org...
Null hsa-miR-561 View Gene Set 4.347e-07 2925 7.357e-05 4 microRNA targets for hsa-miR-561 from miranda.targets www.mirbase.org...
Null hsa-miR-548d-3p View Gene Set 8.189e-07 2210 0.0001109 5 microRNA targets for hsa-miR-548d-3p from miranda.targets www.mirbase.org...
Null hsa-miR-513a-3p View Gene Set 1.439e-06 2711 0.0001298 6 microRNA targets for hsa-miR-513a-3p from miranda.targets www.mirbase.org...
Null hsa-miR-548a-5p View Gene Set 1.534e-06 2983 0.0001298 6 microRNA targets for hsa-miR-548a-5p from miranda.targets www.mirbase.org...
Null hsa-miR-548c-5p View Gene Set 1.387e-06 2909 0.0001298 6 microRNA targets for hsa-miR-548c-5p from miranda.targets www.mirbase.org...
Null hsa-miR-200b View Gene Set 1.963e-06 1789 0.0001332 9 microRNA targets for hsa-miR-200b from miranda.targets www.mirbase.org...
Null hsa-miR-200c View Gene Set 2.147e-06 1794 0.0001332 9 microRNA targets for hsa-miR-200c from miranda.targets www.mirbase.org...
Null hsa-miR-548a-3p View Gene Set 2.383e-06 2420 0.0001332 9 microRNA targets for hsa-miR-548a-3p from miranda.targets www.mirbase.org...
Null hsa-miR-548d-5p View Gene Set 2.335e-06 3270 0.0001332 9 microRNA targets for hsa-miR-548d-5p from miranda.targets www.mirbase.org...
Null hsa-miR-548n View Gene Set 2.558e-06 3830 0.0001332 9 microRNA targets for hsa-miR-548n from miranda.targets www.mirbase.org...
Null hsa-miR-548b-5p View Gene Set 3.152e-06 3175 0.0001362 14 microRNA targets for hsa-miR-548b-5p from miranda.targets www.mirbase.org...
Null hsa-miR-548h View Gene Set 3.218e-06 2539 0.0001362 14 microRNA targets for hsa-miR-548h from miranda.targets www.mirbase.org...
Null hsa-miR-548j View Gene Set 2.963e-06 2652 0.0001362 14 microRNA targets for hsa-miR-548j from miranda.targets www.mirbase.org...
Null hsa-miR-548k View Gene Set 3.424e-06 1874 0.0001364 17 microRNA targets for hsa-miR-548k from miranda.targets www.mirbase.org...
Null hsa-miR-548p View Gene Set 4.83e-06 2743 0.0001817 18 microRNA targets for hsa-miR-548p from miranda.targets www.mirbase.org...
Null hsa-miR-142-5p View Gene Set 5.81e-06 2312 0.0001873 19 microRNA targets for hsa-miR-142-5p from miranda.targets www.mirbase.org...
Null hsa-miR-335 View Gene Set 5.75e-06 1631 0.0001873 19 microRNA targets for hsa-miR-335 from miranda.targets www.mirbase.org...
Null hsa-miR-570 View Gene Set 5.611e-06 3124 0.0001873 19 microRNA targets for hsa-miR-570 from miranda.targets www.mirbase.org...
Null hsa-miR-944 View Gene Set 7.115e-06 2438 0.0002189 22 microRNA targets for hsa-miR-944 from miranda.targets www.mirbase.org...
Null hsa-miR-300 View Gene Set 8.242e-06 1644 0.0002325 23 microRNA targets for hsa-miR-300 from miranda.targets www.mirbase.org...
Null hsa-miR-429 View Gene Set 8.218e-06 1921 0.0002325 23 microRNA targets for hsa-miR-429 from miranda.targets www.mirbase.org...
Null hsa-miR-548e View Gene Set 8.962e-06 2325 0.0002427 25 microRNA targets for hsa-miR-548e from miranda.targets www.mirbase.org...
Null hsa-miR-522 View Gene Set 9.757e-06 1877 0.0002446 26 microRNA targets for hsa-miR-522 from miranda.targets www.mirbase.org...
Null hsa-miR-607 View Gene Set 9.494e-06 2322 0.0002446 26 microRNA targets for hsa-miR-607 from miranda.targets www.mirbase.org...
Null hsa-miR-1283 View Gene Set 1.16e-05 1960 0.0002804 28 microRNA targets for hsa-miR-1283 from miranda.targets www.mirbase.org...
Null hsa-miR-146a View Gene Set 1.319e-05 1323 0.0003079 29 microRNA targets for hsa-miR-146a from miranda.targets www.mirbase.org...
Null hsa-miR-891b View Gene Set 1.768e-05 1022 0.0003989 30 microRNA targets for hsa-miR-891b from miranda.targets www.mirbase.org...
Null hsa-miR-590-3p View Gene Set 1.935e-05 3575 0.0004225 31 microRNA targets for hsa-miR-590-3p from miranda.targets www.mirbase.org...
Null hsa-miR-548g View Gene Set 3.133e-05 2114 0.0006627 32 microRNA targets for hsa-miR-548g from miranda.targets www.mirbase.org...
Null hsa-miR-26b View Gene Set 3.377e-05 1511 0.0006929 33 microRNA targets for hsa-miR-26b from miranda.targets www.mirbase.org...
Null hsa-miR-633 View Gene Set 3.873e-05 1452 0.0007711 34 microRNA targets for hsa-miR-633 from miranda.targets www.mirbase.org...
Null hsa-miR-548f View Gene Set 4.045e-05 2082 0.0007825 35 microRNA targets for hsa-miR-548f from miranda.targets www.mirbase.org...
Null hsa-miR-380 View Gene Set 4.398e-05 1449 0.000827 36 microRNA targets for hsa-miR-380 from miranda.targets www.mirbase.org...
Null hsa-miR-1197 View Gene Set 5.79e-05 1210 0.001059 37 microRNA targets for hsa-miR-1197 from miranda.targets www.mirbase.org...
Null hsa-miR-496 View Gene Set 7.628e-05 1044 0.001359 38 microRNA targets for hsa-miR-496 from miranda.targets www.mirbase.org...
Null hsa-miR-1323 View Gene Set 8.597e-05 2071 0.001492 39 microRNA targets for hsa-miR-1323 from miranda.targets www.mirbase.org...
Null hsa-miR-146b-5p View Gene Set 9.353e-05 1330 0.001582 40 microRNA targets for hsa-miR-146b-5p from miranda.targets www.mirbase.org...
Null hsa-miR-301a View Gene Set 9.579e-05 2114 0.001582 40 microRNA targets for hsa-miR-301a from miranda.targets www.mirbase.org...
Null hsa-miR-559 View Gene Set 0.0001037 2900 0.001671 42 microRNA targets for hsa-miR-559 from miranda.targets www.mirbase.org...
Null hsa-miR-181a View Gene Set 0.0001105 1946 0.0017 43 microRNA targets for hsa-miR-181a from miranda.targets www.mirbase.org...
Null hsa-miR-181d View Gene Set 0.00011 2212 0.0017 43 microRNA targets for hsa-miR-181d from miranda.targets www.mirbase.org...
Null hsa-miR-199a-3p View Gene Set 0.0001242 1232 0.001806 45 microRNA targets for hsa-miR-199a-3p from miranda.targets www.mirbase.org...
Null hsa-miR-199b-3p View Gene Set 0.0001242 1232 0.001806 45 microRNA targets for hsa-miR-199b-3p from miranda.targets www.mirbase.org...
Null hsa-miR-301b View Gene Set 0.0001254 2090 0.001806 45 microRNA targets for hsa-miR-301b from miranda.targets www.mirbase.org...
Null hsa-miR-183 View Gene Set 0.0001392 1239 0.001963 48 microRNA targets for hsa-miR-183 from miranda.targets www.mirbase.org...
Null hsa-miR-374a View Gene Set 0.0001565 1933 0.002162 49 microRNA targets for hsa-miR-374a from miranda.targets www.mirbase.org...
Null hsa-miR-142-3p View Gene Set 0.0001728 1169 0.002339 50 microRNA targets for hsa-miR-142-3p from miranda.targets www.mirbase.org...
Null hsa-miR-579 View Gene Set 0.000194 1840 0.002576 51 microRNA targets for hsa-miR-579 from miranda.targets www.mirbase.org...
Null hsa-miR-338-5p View Gene Set 0.0002232 1707 0.002848 52 microRNA targets for hsa-miR-338-5p from miranda.targets www.mirbase.org...
Null hsa-miR-381 View Gene Set 0.0002313 1638 0.002848 52 microRNA targets for hsa-miR-381 from miranda.targets www.mirbase.org...
Null hsa-miR-545 View Gene Set 0.0002306 2246 0.002848 52 microRNA targets for hsa-miR-545 from miranda.targets www.mirbase.org...
Null hsa-miR-548o View Gene Set 0.0002221 2216 0.002848 52 microRNA targets for hsa-miR-548o from miranda.targets www.mirbase.org...
Null hsa-miR-888 View Gene Set 0.0002786 1379 0.003369 56 microRNA targets for hsa-miR-888 from miranda.targets www.mirbase.org...
Null hsa-miR-641 View Gene Set 0.0003031 2384 0.0036 57 microRNA targets for hsa-miR-641 from miranda.targets www.mirbase.org...
Null hsa-miR-369-3p View Gene Set 0.0003476 1454 0.004057 58 microRNA targets for hsa-miR-369-3p from miranda.targets www.mirbase.org...
Null hsa-miR-181b View Gene Set 0.0003811 2118 0.004373 59 microRNA targets for hsa-miR-181b from miranda.targets www.mirbase.org...
Null hsa-miR-206 View Gene Set 0.0003931 1605 0.004436 60 microRNA targets for hsa-miR-206 from miranda.targets www.mirbase.org...
Null hsa-miR-181c View Gene Set 0.0004066 1844 0.004439 61 microRNA targets for hsa-miR-181c from miranda.targets www.mirbase.org...
Null hsa-miR-27b View Gene Set 0.0004052 1732 0.004439 61 microRNA targets for hsa-miR-27b from miranda.targets www.mirbase.org...
Null hsa-miR-606 View Gene Set 0.0004974 1040 0.005346 63 microRNA targets for hsa-miR-606 from miranda.targets www.mirbase.org...
Null hsa-miR-30a View Gene Set 0.0005311 1611 0.005618 64 microRNA targets for hsa-miR-30a from miranda.targets www.mirbase.org...
Null hsa-miR-452 View Gene Set 0.0005744 1919 0.005892 65 microRNA targets for hsa-miR-452 from miranda.targets www.mirbase.org...
Null hsa-miR-524-5p View Gene Set 0.0005727 2574 0.005892 65 microRNA targets for hsa-miR-524-5p from miranda.targets www.mirbase.org...
Null hsa-miR-124 View Gene Set 0.0006897 1319 0.006969 67 microRNA targets for hsa-miR-124 from miranda.targets www.mirbase.org...
Null hsa-miR-223 View Gene Set 0.0007368 1344 0.007336 68 microRNA targets for hsa-miR-223 from miranda.targets www.mirbase.org...
Null hsa-miR-331-5p View Gene Set 0.0007598 815 0.007455 69 microRNA targets for hsa-miR-331-5p from miranda.targets www.mirbase.org...
Null hsa-miR-130a View Gene Set 0.0007748 1687 0.007471 70 microRNA targets for hsa-miR-130a from miranda.targets www.mirbase.org...
Null hsa-miR-421 View Gene Set 0.0007835 1629 0.007471 70 microRNA targets for hsa-miR-421 from miranda.targets www.mirbase.org...
Null hsa-miR-105 View Gene Set 0.0008103 1644 0.007619 72 microRNA targets for hsa-miR-105 from miranda.targets www.mirbase.org...
Null hsa-miR-454 View Gene Set 0.0008377 1949 0.007768 73 microRNA targets for hsa-miR-454 from miranda.targets www.mirbase.org...
Null hsa-miR-580 View Gene Set 0.0008496 2207 0.007772 74 microRNA targets for hsa-miR-580 from miranda.targets www.mirbase.org...
Null hsa-miR-802 View Gene Set 0.0008897 1859 0.008031 75 microRNA targets for hsa-miR-802 from miranda.targets www.mirbase.org...
Null hsa-miR-20a View Gene Set 0.0009375 2324 0.008351 76 microRNA targets for hsa-miR-20a from miranda.targets www.mirbase.org...
Null hsa-miR-374b View Gene Set 0.0009525 1802 0.008351 76 microRNA targets for hsa-miR-374b from miranda.targets www.mirbase.org...
Null hsa-miR-568 View Gene Set 0.0009621 2065 0.008351 76 microRNA targets for hsa-miR-568 from miranda.targets www.mirbase.org...
Null hsa-miR-494 View Gene Set 0.001012 1886 0.008673 79 microRNA targets for hsa-miR-494 from miranda.targets www.mirbase.org...
Null hsa-miR-23a View Gene Set 0.001059 1861 0.008848 80 microRNA targets for hsa-miR-23a from miranda.targets www.mirbase.org...
Null hsa-miR-922 View Gene Set 0.001051 2129 0.008848 80 microRNA targets for hsa-miR-922 from miranda.targets www.mirbase.org...
Null hsa-miR-23b View Gene Set 0.001145 1858 0.009452 82 microRNA targets for hsa-miR-23b from miranda.targets www.mirbase.org...
Null hsa-miR-20b View Gene Set 0.001171 2122 0.009551 83 microRNA targets for hsa-miR-20b from miranda.targets www.mirbase.org...
Null hsa-miR-590-5p View Gene Set 0.001223 1206 0.009855 84 microRNA targets for hsa-miR-590-5p from miranda.targets www.mirbase.org...
Null hsa-miR-1259 View Gene Set 0.001315 1309 0.01033 85 microRNA targets for hsa-miR-1259 from miranda.targets www.mirbase.org...
Null hsa-miR-1264 View Gene Set 0.001327 2008 0.01033 85 microRNA targets for hsa-miR-1264 from miranda.targets www.mirbase.org...
Null hsa-miR-216b View Gene Set 0.001302 1416 0.01033 85 microRNA targets for hsa-miR-216b from miranda.targets www.mirbase.org...
Null hsa-miR-365 View Gene Set 0.001371 788 0.01055 88 microRNA targets for hsa-miR-365 from miranda.targets www.mirbase.org...
Null hsa-miR-130b View Gene Set 0.001435 1682 0.01067 89 microRNA targets for hsa-miR-130b from miranda.targets www.mirbase.org...
Null hsa-miR-18a View Gene Set 0.00141 1494 0.01067 89 microRNA targets for hsa-miR-18a from miranda.targets www.mirbase.org...
Null hsa-miR-582-5p View Gene Set 0.001428 1971 0.01067 89 microRNA targets for hsa-miR-582-5p from miranda.targets www.mirbase.org...
Null hsa-miR-19a View Gene Set 0.001551 2189 0.01132 92 microRNA targets for hsa-miR-19a from miranda.targets www.mirbase.org...
Null hsa-miR-656 View Gene Set 0.001556 1774 0.01132 92 microRNA targets for hsa-miR-656 from miranda.targets www.mirbase.org...
Null hsa-miR-1278 View Gene Set 0.001635 1219 0.01142 94 microRNA targets for hsa-miR-1278 from miranda.targets www.mirbase.org...
Null hsa-miR-1297 View Gene Set 0.001613 1019 0.01142 94 microRNA targets for hsa-miR-1297 from miranda.targets www.mirbase.org...
Null hsa-miR-30d View Gene Set 0.001616 1500 0.01142 94 microRNA targets for hsa-miR-30d from miranda.targets www.mirbase.org...
Null hsa-miR-576-5p View Gene Set 0.001636 1494 0.01142 94 microRNA targets for hsa-miR-576-5p from miranda.targets www.mirbase.org...
Null hsa-miR-302b View Gene Set 0.001708 2091 0.0118 98 microRNA targets for hsa-miR-302b from miranda.targets www.mirbase.org...
Null hsa-miR-1284 View Gene Set 0.001885 1108 0.01289 99 microRNA targets for hsa-miR-1284 from miranda.targets www.mirbase.org...
Null hsa-miR-567 View Gene Set 0.001921 1183 0.013 100 microRNA targets for hsa-miR-567 from miranda.targets www.mirbase.org...
Null hsa-miR-1 View Gene Set 0.002016 1772 0.01328 101 microRNA targets for hsa-miR-1 from miranda.targets www.mirbase.org...
Null hsa-miR-186 View Gene Set 0.00202 2681 0.01328 101 microRNA targets for hsa-miR-186 from miranda.targets www.mirbase.org...
Null hsa-miR-664 View Gene Set 0.001996 2111 0.01328 101 microRNA targets for hsa-miR-664 from miranda.targets www.mirbase.org...
Null hsa-miR-30e View Gene Set 0.002042 1792 0.01329 104 microRNA targets for hsa-miR-30e from miranda.targets www.mirbase.org...
Null hsa-miR-26a View Gene Set 0.002073 1414 0.01337 105 microRNA targets for hsa-miR-26a from miranda.targets www.mirbase.org...
Null hsa-miR-569 View Gene Set 0.002114 1013 0.01343 106 microRNA targets for hsa-miR-569 from miranda.targets www.mirbase.org...
Null hsa-miR-613 View Gene Set 0.002123 1335 0.01343 106 microRNA targets for hsa-miR-613 from miranda.targets www.mirbase.org...
Null hsa-miR-340 View Gene Set 0.002221 2504 0.01392 108 microRNA targets for hsa-miR-340 from miranda.targets www.mirbase.org...
Null hsa-miR-30b View Gene Set 0.002381 1695 0.01477 109 microRNA targets for hsa-miR-30b from miranda.targets www.mirbase.org...
Null hsa-miR-548l View Gene Set 0.0024 2599 0.01477 109 microRNA targets for hsa-miR-548l from miranda.targets www.mirbase.org...
Null hsa-miR-141 View Gene Set 0.002505 1773 0.01528 111 microRNA targets for hsa-miR-141 from miranda.targets www.mirbase.org...
Null hsa-miR-1248 View Gene Set 0.002744 3013 0.01633 112 microRNA targets for hsa-miR-1248 from miranda.targets www.mirbase.org...
Null hsa-miR-200a View Gene Set 0.002822 1619 0.01633 112 microRNA targets for hsa-miR-200a from miranda.targets www.mirbase.org...
Null hsa-miR-424 View Gene Set 0.002711 2392 0.01633 112 microRNA targets for hsa-miR-424 from miranda.targets www.mirbase.org...
Null hsa-miR-495 View Gene Set 0.002799 1793 0.01633 112 microRNA targets for hsa-miR-495 from miranda.targets www.mirbase.org...
Null hsa-miR-583 View Gene Set 0.002753 2115 0.01633 112 microRNA targets for hsa-miR-583 from miranda.targets www.mirbase.org...
Null hsa-miR-768-3p View Gene Set 0.002812 2025 0.01633 112 microRNA targets for hsa-miR-768-3p from miranda.targets www.mirbase.org...
Null hsa-miR-1272 View Gene Set 0.002924 1955 0.01658 118 microRNA targets for hsa-miR-1272 from miranda.targets www.mirbase.org...
Null hsa-miR-1305 View Gene Set 0.003028 1619 0.01658 118 microRNA targets for hsa-miR-1305 from miranda.targets www.mirbase.org...
Null hsa-miR-18b View Gene Set 0.003015 1494 0.01658 118 microRNA targets for hsa-miR-18b from miranda.targets www.mirbase.org...
Null hsa-miR-21 View Gene Set 0.003024 1053 0.01658 118 microRNA targets for hsa-miR-21 from miranda.targets www.mirbase.org...
Null hsa-miR-498 View Gene Set 0.003015 1182 0.01658 118 microRNA targets for hsa-miR-498 from miranda.targets www.mirbase.org...
Null hsa-miR-506 View Gene Set 0.003036 1386 0.01658 118 microRNA targets for hsa-miR-506 from miranda.targets www.mirbase.org...
Null hsa-miR-605 View Gene Set 0.003024 1295 0.01658 118 microRNA targets for hsa-miR-605 from miranda.targets www.mirbase.org...
Null hsa-miR-577 View Gene Set 0.003155 2745 0.01708 125 microRNA targets for hsa-miR-577 from miranda.targets www.mirbase.org...
Null hsa-miR-410 View Gene Set 0.003571 1101 0.01918 126 microRNA targets for hsa-miR-410 from miranda.targets www.mirbase.org...
Null hsa-miR-27a View Gene Set 0.003885 1723 0.02071 127 microRNA targets for hsa-miR-27a from miranda.targets www.mirbase.org...
Null hsa-miR-144 View Gene Set 0.004251 1767 0.02249 128 microRNA targets for hsa-miR-144 from miranda.targets www.mirbase.org...
Null hsa-miR-548m View Gene Set 0.004574 2295 0.02382 129 microRNA targets for hsa-miR-548m from miranda.targets www.mirbase.org...
Null hsa-miR-600 View Gene Set 0.004551 1431 0.02382 129 microRNA targets for hsa-miR-600 from miranda.targets www.mirbase.org...
Null hsa-miR-382 View Gene Set 0.004757 1641 0.02458 131 microRNA targets for hsa-miR-382 from miranda.targets www.mirbase.org...
Null hsa-miR-544 View Gene Set 0.004813 2072 0.02469 132 microRNA targets for hsa-miR-544 from miranda.targets www.mirbase.org...
Null hsa-miR-19b View Gene Set 0.00514 2017 0.02617 133 microRNA targets for hsa-miR-19b from miranda.targets www.mirbase.org...
Null hsa-miR-513c View Gene Set 0.005241 1451 0.02648 134 microRNA targets for hsa-miR-513c from miranda.targets www.mirbase.org...
Null hsa-miR-155 View Gene Set 0.005317 1331 0.02651 135 microRNA targets for hsa-miR-155 from miranda.targets www.mirbase.org...
Null hsa-miR-576-3p View Gene Set 0.005326 1704 0.02651 135 microRNA targets for hsa-miR-576-3p from miranda.targets www.mirbase.org...
Null hsa-miR-208b View Gene Set 0.005619 499 0.02777 137 microRNA targets for hsa-miR-208b from miranda.targets www.mirbase.org...
Null hsa-miR-302c View Gene Set 0.005774 2046 0.02833 138 microRNA targets for hsa-miR-302c from miranda.targets www.mirbase.org...
Null hsa-miR-873 View Gene Set 0.005924 1393 0.02885 139 microRNA targets for hsa-miR-873 from miranda.targets www.mirbase.org...
Null hsa-miR-1276 View Gene Set 0.005968 1352 0.02886 140 microRNA targets for hsa-miR-1276 from miranda.targets www.mirbase.org...
Null hsa-miR-1299 View Gene Set 0.006365 2168 0.03056 141 microRNA targets for hsa-miR-1299 from miranda.targets www.mirbase.org...
Null hsa-miR-1253 View Gene Set 0.006714 1976 0.03092 142 microRNA targets for hsa-miR-1253 from miranda.targets www.mirbase.org...
Null hsa-miR-182 View Gene Set 0.006542 1930 0.03092 142 microRNA targets for hsa-miR-182 from miranda.targets www.mirbase.org...
Null hsa-miR-320a View Gene Set 0.006711 2080 0.03092 142 microRNA targets for hsa-miR-320a from miranda.targets www.mirbase.org...
Null hsa-miR-320b View Gene Set 0.006711 2080 0.03092 142 microRNA targets for hsa-miR-320b from miranda.targets www.mirbase.org...
Null hsa-miR-935 View Gene Set 0.006709 943 0.03092 142 microRNA targets for hsa-miR-935 from miranda.targets www.mirbase.org...
Null hsa-miR-938 View Gene Set 0.006542 580 0.03092 142 microRNA targets for hsa-miR-938 from miranda.targets www.mirbase.org...
Null hsa-miR-556-5p View Gene Set 0.007377 1236 0.03374 148 microRNA targets for hsa-miR-556-5p from miranda.targets www.mirbase.org...
Null hsa-miR-30c View Gene Set 0.007671 1792 0.03471 149 microRNA targets for hsa-miR-30c from miranda.targets www.mirbase.org...
Null hsa-miR-587 View Gene Set 0.007691 1524 0.03471 149 microRNA targets for hsa-miR-587 from miranda.targets www.mirbase.org...
Null hsa-miR-106a View Gene Set 0.007933 2173 0.03533 151 microRNA targets for hsa-miR-106a from miranda.targets www.mirbase.org...
Null hsa-miR-17 View Gene Set 0.007933 2173 0.03533 151 microRNA targets for hsa-miR-17 from miranda.targets www.mirbase.org...
Null hsa-miR-193b View Gene Set 0.008477 857 0.03751 153 microRNA targets for hsa-miR-193b from miranda.targets www.mirbase.org...
Null hsa-miR-376a View Gene Set 0.008575 1199 0.0377 154 microRNA targets for hsa-miR-376a from miranda.targets www.mirbase.org...
Null hsa-miR-216a View Gene Set 0.009448 1454 0.04127 155 microRNA targets for hsa-miR-216a from miranda.targets www.mirbase.org...
Null hsa-miR-320c View Gene Set 0.009638 1860 0.04183 156 microRNA targets for hsa-miR-320c from miranda.targets www.mirbase.org...
Null hsa-miR-208a View Gene Set 0.009985 472 0.04285 157 microRNA targets for hsa-miR-208a from miranda.targets www.mirbase.org...
Null hsa-miR-330-3p View Gene Set 0.009999 2124 0.04285 157 microRNA targets for hsa-miR-330-3p from miranda.targets www.mirbase.org...
Null hsa-miR-448 View Gene Set 0.01023 1660 0.04327 159 microRNA targets for hsa-miR-448 from miranda.targets www.mirbase.org...
Null hsa-miR-539 View Gene Set 0.01022 2308 0.04327 159 microRNA targets for hsa-miR-539 from miranda.targets www.mirbase.org...
Null hsa-miR-377 View Gene Set 0.0103 1713 0.04333 161 microRNA targets for hsa-miR-377 from miranda.targets www.mirbase.org...
Null hsa-miR-515-5p View Gene Set 0.01051 1821 0.04394 162 microRNA targets for hsa-miR-515-5p from miranda.targets www.mirbase.org...
Null hsa-miR-491-3p View Gene Set 0.01067 1136 0.04431 163 microRNA targets for hsa-miR-491-3p from miranda.targets www.mirbase.org...
Null hsa-miR-597 View Gene Set 0.01163 729 0.04803 164 microRNA targets for hsa-miR-597 from miranda.targets www.mirbase.org...
Null hsa-miR-152 View Gene Set 0.01209 1451 0.04874 165 microRNA targets for hsa-miR-152 from miranda.targets www.mirbase.org...
Null hsa-miR-32 View Gene Set 0.01205 1319 0.04874 165 microRNA targets for hsa-miR-32 from miranda.targets www.mirbase.org...
Null hsa-miR-582-3p View Gene Set 0.01201 1217 0.04874 165 microRNA targets for hsa-miR-582-3p from miranda.targets www.mirbase.org...
Null hsa-miR-889 View Gene Set 0.01196 873 0.04874 165 microRNA targets for hsa-miR-889 from miranda.targets www.mirbase.org...

Gene Set Collection: mirbase.targets

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null hsa-miR-548c-3p View Gene Set 1.331e-06 863 0.0009463 1 microRNA targets for hsa-miR-548c-3p from mirbase.targets www.mirbase.org...
Null hsa-let-7b* View Gene Set 1.012e-05 772 0.002399 2 microRNA targets for hsa-let-7b* from mirbase.targets www.mirbase.org...
Null hsa-miR-144 View Gene Set 7.53e-06 796 0.002399 2 microRNA targets for hsa-miR-144 from mirbase.targets www.mirbase.org...
Null hsa-miR-561 View Gene Set 3.151e-05 651 0.005601 4 microRNA targets for hsa-miR-561 from mirbase.targets www.mirbase.org...
Null hsa-miR-1 View Gene Set 5.085e-05 659 0.006738 5 microRNA targets for hsa-miR-1 from mirbase.targets www.mirbase.org...
Null hsa-miR-26b View Gene Set 5.686e-05 696 0.006738 5 microRNA targets for hsa-miR-26b from mirbase.targets www.mirbase.org...
Null hsa-miR-222 View Gene Set 6.792e-05 714 0.006899 7 microRNA targets for hsa-miR-222 from mirbase.targets www.mirbase.org...
Null hsa-miR-583 View Gene Set 8.206e-05 632 0.007293 8 microRNA targets for hsa-miR-583 from mirbase.targets www.mirbase.org...
Null hsa-miR-19a View Gene Set 0.0001049 803 0.008289 9 microRNA targets for hsa-miR-19a from mirbase.targets www.mirbase.org...
Null hsa-let-7f-2* View Gene Set 0.0001376 820 0.009781 10 microRNA targets for hsa-let-7f-2* from mirbase.targets www.mirbase.org...
Null hsa-miR-216b View Gene Set 0.0002179 745 0.01213 11 microRNA targets for hsa-miR-216b from mirbase.targets www.mirbase.org...
Null hsa-miR-454 View Gene Set 0.0002559 769 0.01213 11 microRNA targets for hsa-miR-454 from mirbase.targets www.mirbase.org...
Null hsa-miR-455-3p View Gene Set 0.0002093 824 0.01213 11 microRNA targets for hsa-miR-455-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-518b View Gene Set 0.0002538 883 0.01213 11 microRNA targets for hsa-miR-518b from mirbase.targets www.mirbase.org...
Null hsa-miR-802 View Gene Set 0.0002327 683 0.01213 11 microRNA targets for hsa-miR-802 from mirbase.targets www.mirbase.org...
Null hsa-miR-26a View Gene Set 0.0002731 718 0.01214 16 microRNA targets for hsa-miR-26a from mirbase.targets www.mirbase.org...
Null hsa-miR-10a* View Gene Set 0.0003283 585 0.01229 17 microRNA targets for hsa-miR-10a* from mirbase.targets www.mirbase.org...
Null hsa-miR-200c View Gene Set 0.0003153 871 0.01229 17 microRNA targets for hsa-miR-200c from mirbase.targets www.mirbase.org...
Null hsa-miR-518f View Gene Set 0.0003183 948 0.01229 17 microRNA targets for hsa-miR-518f from mirbase.targets www.mirbase.org...
Null hsa-miR-206 View Gene Set 0.0003868 683 0.0131 20 microRNA targets for hsa-miR-206 from mirbase.targets www.mirbase.org...
Null hsa-miR-889 View Gene Set 0.0003788 650 0.0131 20 microRNA targets for hsa-miR-889 from mirbase.targets www.mirbase.org...
Null hsa-miR-146a* View Gene Set 0.000506 556 0.01439 22 microRNA targets for hsa-miR-146a* from mirbase.targets www.mirbase.org...
Null hsa-miR-376a View Gene Set 0.0004918 746 0.01439 22 microRNA targets for hsa-miR-376a from mirbase.targets www.mirbase.org...
Null hsa-miR-518d-3p View Gene Set 0.0004954 916 0.01439 22 microRNA targets for hsa-miR-518d-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-9* View Gene Set 0.0004686 570 0.01439 22 microRNA targets for hsa-miR-9* from mirbase.targets www.mirbase.org...
Null hsa-miR-199a-3p View Gene Set 0.0006003 789 0.01607 26 microRNA targets for hsa-miR-199a-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-518c View Gene Set 0.0006165 921 0.01607 26 microRNA targets for hsa-miR-518c from mirbase.targets www.mirbase.org...
Null hsa-miR-616* View Gene Set 0.0006327 533 0.01607 26 microRNA targets for hsa-miR-616* from mirbase.targets www.mirbase.org...
Null hsa-let-7e* View Gene Set 0.0007387 790 0.01811 29 microRNA targets for hsa-let-7e* from mirbase.targets www.mirbase.org...
Null hsa-miR-429 View Gene Set 0.000814 793 0.01907 30 microRNA targets for hsa-miR-429 from mirbase.targets www.mirbase.org...
Null hsa-miR-7-1* View Gene Set 0.0008315 524 0.01907 30 microRNA targets for hsa-miR-7-1* from mirbase.targets www.mirbase.org...
Null hsa-let-7d* View Gene Set 0.000885 781 0.01966 32 microRNA targets for hsa-let-7d* from mirbase.targets www.mirbase.org...
Null hsa-miR-30a* View Gene Set 0.001085 726 0.021 33 microRNA targets for hsa-miR-30a* from mirbase.targets www.mirbase.org...
Null hsa-miR-518e View Gene Set 0.00106 923 0.021 33 microRNA targets for hsa-miR-518e from mirbase.targets www.mirbase.org...
Null hsa-miR-549 View Gene Set 0.001093 718 0.021 33 microRNA targets for hsa-miR-549 from mirbase.targets www.mirbase.org...
Null hsa-miR-562 View Gene Set 0.001074 697 0.021 33 microRNA targets for hsa-miR-562 from mirbase.targets www.mirbase.org...
Null hsa-miR-888* View Gene Set 0.00108 572 0.021 33 microRNA targets for hsa-miR-888* from mirbase.targets www.mirbase.org...
Null hsa-miR-7-2* View Gene Set 0.001309 531 0.02448 38 microRNA targets for hsa-miR-7-2* from mirbase.targets www.mirbase.org...
Null hsa-miR-320 View Gene Set 0.001448 771 0.0264 39 microRNA targets for hsa-miR-320 from mirbase.targets www.mirbase.org...
Null hsa-miR-301b View Gene Set 0.001522 763 0.02671 40 microRNA targets for hsa-miR-301b from mirbase.targets www.mirbase.org...
Null hsa-miR-325 View Gene Set 0.00154 720 0.02671 40 microRNA targets for hsa-miR-325 from mirbase.targets www.mirbase.org...
Null hsa-miR-369-3p View Gene Set 0.001582 750 0.02678 42 microRNA targets for hsa-miR-369-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-655 View Gene Set 0.001636 654 0.02706 43 microRNA targets for hsa-miR-655 from mirbase.targets www.mirbase.org...
Null hsa-miR-200a View Gene Set 0.00175 908 0.02801 44 microRNA targets for hsa-miR-200a from mirbase.targets www.mirbase.org...
Null hsa-miR-548d-3p View Gene Set 0.001812 978 0.02801 44 microRNA targets for hsa-miR-548d-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-891b View Gene Set 0.001782 755 0.02801 44 microRNA targets for hsa-miR-891b from mirbase.targets www.mirbase.org...
Null hsa-let-7f-1* View Gene Set 0.002034 751 0.02952 47 microRNA targets for hsa-let-7f-1* from mirbase.targets www.mirbase.org...
Null hsa-miR-194 View Gene Set 0.002015 731 0.02952 47 microRNA targets for hsa-miR-194 from mirbase.targets www.mirbase.org...
Null hsa-miR-302d* View Gene Set 0.001998 693 0.02952 47 microRNA targets for hsa-miR-302d* from mirbase.targets www.mirbase.org...
Null hsa-miR-374b View Gene Set 0.002304 574 0.03258 50 microRNA targets for hsa-miR-374b from mirbase.targets www.mirbase.org...
Null hsa-miR-570 View Gene Set 0.002337 603 0.03258 50 microRNA targets for hsa-miR-570 from mirbase.targets www.mirbase.org...
Null hsa-miR-101 View Gene Set 0.002564 818 0.0343 52 microRNA targets for hsa-miR-101 from mirbase.targets www.mirbase.org...
Null hsa-miR-200b View Gene Set 0.002605 854 0.0343 52 microRNA targets for hsa-miR-200b from mirbase.targets www.mirbase.org...
Null hsa-miR-376b View Gene Set 0.002553 779 0.0343 52 microRNA targets for hsa-miR-376b from mirbase.targets www.mirbase.org...
Null hsa-miR-871 View Gene Set 0.002671 707 0.03454 55 microRNA targets for hsa-miR-871 from mirbase.targets www.mirbase.org...
Null hsa-miR-146b-5p View Gene Set 0.002857 690 0.03563 56 microRNA targets for hsa-miR-146b-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-152 View Gene Set 0.002807 792 0.03563 56 microRNA targets for hsa-miR-152 from mirbase.targets www.mirbase.org...
Null hsa-miR-382 View Gene Set 0.003017 714 0.03659 58 microRNA targets for hsa-miR-382 from mirbase.targets www.mirbase.org...
Null hsa-miR-498 View Gene Set 0.003099 744 0.03659 58 microRNA targets for hsa-miR-498 from mirbase.targets www.mirbase.org...
Null hsa-miR-548c-5p View Gene Set 0.003133 801 0.03659 58 microRNA targets for hsa-miR-548c-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-95 View Gene Set 0.003139 787 0.03659 58 microRNA targets for hsa-miR-95 from mirbase.targets www.mirbase.org...
Null hsa-miR-221 View Gene Set 0.003277 783 0.03758 62 microRNA targets for hsa-miR-221 from mirbase.targets www.mirbase.org...
Null hsa-miR-548b-5p View Gene Set 0.003334 818 0.03762 63 microRNA targets for hsa-miR-548b-5p from mirbase.targets www.mirbase.org...
Null hsa-let-7a* View Gene Set 0.003493 772 0.03855 64 microRNA targets for hsa-let-7a* from mirbase.targets www.mirbase.org...
Null hsa-miR-146a View Gene Set 0.003524 717 0.03855 64 microRNA targets for hsa-miR-146a from mirbase.targets www.mirbase.org...
Null hsa-miR-525-3p View Gene Set 0.003679 790 0.03963 66 microRNA targets for hsa-miR-525-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-191 View Gene Set 0.003879 709 0.04116 67 microRNA targets for hsa-miR-191 from mirbase.targets www.mirbase.org...
Null hsa-miR-524-5p View Gene Set 0.00394 708 0.0412 68 microRNA targets for hsa-miR-524-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-105 View Gene Set 0.004294 719 0.04424 69 microRNA targets for hsa-miR-105 from mirbase.targets www.mirbase.org...
Null hsa-miR-154* View Gene Set 0.004529 516 0.04472 70 microRNA targets for hsa-miR-154* from mirbase.targets www.mirbase.org...
Null hsa-miR-181b View Gene Set 0.004523 874 0.04472 70 microRNA targets for hsa-miR-181b from mirbase.targets www.mirbase.org...
Null hsa-miR-606 View Gene Set 0.004515 596 0.04472 70 microRNA targets for hsa-miR-606 from mirbase.targets www.mirbase.org...
Null hsa-miR-491-3p View Gene Set 0.004592 767 0.04472 73 microRNA targets for hsa-miR-491-3p from mirbase.targets www.mirbase.org...
Null hsa-let-7c* View Gene Set 0.004758 755 0.04511 74 microRNA targets for hsa-let-7c* from mirbase.targets www.mirbase.org...
Null hsa-miR-493* View Gene Set 0.004698 522 0.04511 74 microRNA targets for hsa-miR-493* from mirbase.targets www.mirbase.org...
Null hsa-miR-485-3p View Gene Set 0.004959 735 0.0464 76 microRNA targets for hsa-miR-485-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-338-5p View Gene Set 0.005129 814 0.04736 77 microRNA targets for hsa-miR-338-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-124 View Gene Set 0.005472 793 0.04863 78 microRNA targets for hsa-miR-124 from mirbase.targets www.mirbase.org...
Null hsa-miR-181a View Gene Set 0.005541 842 0.04863 78 microRNA targets for hsa-miR-181a from mirbase.targets www.mirbase.org...
Null hsa-miR-19b View Gene Set 0.005608 789 0.04863 78 microRNA targets for hsa-miR-19b from mirbase.targets www.mirbase.org...
Null hsa-miR-374a View Gene Set 0.005537 548 0.04863 78 microRNA targets for hsa-miR-374a from mirbase.targets www.mirbase.org...
Null hsa-miR-551b* View Gene Set 0.005377 473 0.04863 78 microRNA targets for hsa-miR-551b* from mirbase.targets www.mirbase.org...
Null hsa-miR-433 View Gene Set 0.005685 731 0.0487 83 microRNA targets for hsa-miR-433 from mirbase.targets www.mirbase.org...

Gene Set Collection: mirtarget2.targets

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null hsa-miR-548d-3p View Gene Set 6.224e-10 1107 3.442e-07 1 microRNA targets for hsa-miR-548d-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-590-3p View Gene Set 2.165e-08 2046 5.985e-06 2 microRNA targets for hsa-miR-590-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-548c-3p View Gene Set 6.417e-08 1804 1.183e-05 3 microRNA targets for hsa-miR-548c-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-944 View Gene Set 2.075e-07 1362 2.869e-05 4 microRNA targets for hsa-miR-944 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-106b View Gene Set 9.689e-07 736 8.93e-05 5 microRNA targets for hsa-miR-106b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-607 View Gene Set 9.548e-07 1137 8.93e-05 5 microRNA targets for hsa-miR-607 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-124 View Gene Set 2.143e-06 432 0.0001185 7 microRNA targets for hsa-miR-124 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-20a View Gene Set 1.588e-06 754 0.0001185 7 microRNA targets for hsa-miR-20a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-545 View Gene Set 2e-06 600 0.0001185 7 microRNA targets for hsa-miR-545 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-559 View Gene Set 1.99e-06 977 0.0001185 7 microRNA targets for hsa-miR-559 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-20b View Gene Set 3.476e-06 795 0.0001602 11 microRNA targets for hsa-miR-20b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-93 View Gene Set 3.327e-06 775 0.0001602 11 microRNA targets for hsa-miR-93 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-641 View Gene Set 4.95e-06 659 0.0002106 13 microRNA targets for hsa-miR-641 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-519d View Gene Set 5.777e-06 714 0.000213 14 microRNA targets for hsa-miR-519d from mirtarget2.targets www.mirbase.org...
Null hsa-miR-548d-5p View Gene Set 5.421e-06 1147 0.000213 14 microRNA targets for hsa-miR-548d-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-17 View Gene Set 8.039e-06 784 0.0002615 16 microRNA targets for hsa-miR-17 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-548b-5p View Gene Set 7.724e-06 1157 0.0002615 16 microRNA targets for hsa-miR-548b-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-522 View Gene Set 1.101e-05 618 0.0003206 18 microRNA targets for hsa-miR-522 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-524-5p View Gene Set 1.08e-05 862 0.0003206 18 microRNA targets for hsa-miR-524-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-200a View Gene Set 1.437e-05 589 0.0003974 20 microRNA targets for hsa-miR-200a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-141 View Gene Set 1.993e-05 574 0.0005247 21 microRNA targets for hsa-miR-141 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-548a-5p View Gene Set 2.669e-05 1120 0.0006709 22 microRNA targets for hsa-miR-548a-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-548c-5p View Gene Set 3.106e-05 1151 0.0007468 23 microRNA targets for hsa-miR-548c-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-106a View Gene Set 3.887e-05 781 0.0008834 24 microRNA targets for hsa-miR-106a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-23a View Gene Set 4.309e-05 858 0.0008834 24 microRNA targets for hsa-miR-23a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-23b View Gene Set 4.313e-05 875 0.0008834 24 microRNA targets for hsa-miR-23b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-506 View Gene Set 4.005e-05 439 0.0008834 24 microRNA targets for hsa-miR-506 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-584 View Gene Set 5.089e-05 278 0.001005 28 microRNA targets for hsa-miR-584 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-494 View Gene Set 6.002e-05 696 0.001144 29 microRNA targets for hsa-miR-494 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-570 View Gene Set 8.067e-05 983 0.001487 30 microRNA targets for hsa-miR-570 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-299-5p View Gene Set 8.406e-05 163 0.0015 31 microRNA targets for hsa-miR-299-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-548a-3p View Gene Set 9.811e-05 900 0.001695 32 microRNA targets for hsa-miR-548a-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-181b View Gene Set 0.0001108 887 0.001813 33 microRNA targets for hsa-miR-181b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-520d-5p View Gene Set 0.0001115 826 0.001813 33 microRNA targets for hsa-miR-520d-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-181d View Gene Set 0.0001353 882 0.002024 35 microRNA targets for hsa-miR-181d from mirtarget2.targets www.mirbase.org...
Null hsa-miR-199a-3p View Gene Set 0.0001354 262 0.002024 35 microRNA targets for hsa-miR-199a-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-199b-3p View Gene Set 0.0001354 262 0.002024 35 microRNA targets for hsa-miR-199b-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-181c View Gene Set 0.0001506 909 0.002136 38 microRNA targets for hsa-miR-181c from mirtarget2.targets www.mirbase.org...
Null hsa-miR-26b View Gene Set 0.0001486 493 0.002136 38 microRNA targets for hsa-miR-26b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-495 View Gene Set 0.0001788 1246 0.002472 40 microRNA targets for hsa-miR-495 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-561 View Gene Set 0.0001895 1193 0.002557 41 microRNA targets for hsa-miR-561 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-513-3p View Gene Set 0.0002208 1119 0.002907 42 microRNA targets for hsa-miR-513-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-605 View Gene Set 0.000228 294 0.002932 43 microRNA targets for hsa-miR-605 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-26a View Gene Set 0.000251 498 0.003155 44 microRNA targets for hsa-miR-26a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-186 View Gene Set 0.0003116 1020 0.00383 45 microRNA targets for hsa-miR-186 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-130b View Gene Set 0.0003222 445 0.003873 46 microRNA targets for hsa-miR-130b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-655 View Gene Set 0.0003373 820 0.003969 47 microRNA targets for hsa-miR-655 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-320 View Gene Set 0.0003657 550 0.004214 48 microRNA targets for hsa-miR-320 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-603 View Gene Set 0.0004178 446 0.004716 49 microRNA targets for hsa-miR-603 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-181a View Gene Set 0.0004282 879 0.004736 50 microRNA targets for hsa-miR-181a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-935 View Gene Set 0.0004886 283 0.005298 51 microRNA targets for hsa-miR-935 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-369-3p View Gene Set 0.0005642 686 0.006 52 microRNA targets for hsa-miR-369-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-214 View Gene Set 0.0006014 332 0.006275 53 microRNA targets for hsa-miR-214 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-183 View Gene Set 0.0006735 240 0.006897 54 microRNA targets for hsa-miR-183 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-501-5p View Gene Set 0.0006861 462 0.006898 55 microRNA targets for hsa-miR-501-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-505 View Gene Set 0.0008121 240 0.008019 56 microRNA targets for hsa-miR-505 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-27b View Gene Set 0.0008653 528 0.008179 57 microRNA targets for hsa-miR-27b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-374a View Gene Set 0.0008726 894 0.008179 57 microRNA targets for hsa-miR-374a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-659 View Gene Set 0.0008575 247 0.008179 57 microRNA targets for hsa-miR-659 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-9 View Gene Set 0.0009336 423 0.008604 60 microRNA targets for hsa-miR-9 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-544 View Gene Set 0.0009576 484 0.008682 61 microRNA targets for hsa-miR-544 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-19a View Gene Set 0.001064 539 0.009494 62 microRNA targets for hsa-miR-19a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-543 View Gene Set 0.001121 710 0.009739 63 microRNA targets for hsa-miR-543 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-613 View Gene Set 0.001127 322 0.009739 63 microRNA targets for hsa-miR-613 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-146b-3p View Gene Set 0.001183 106 0.01006 65 microRNA targets for hsa-miR-146b-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-142-3p View Gene Set 0.001275 150 0.01017 66 microRNA targets for hsa-miR-142-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-205 View Gene Set 0.001287 348 0.01017 66 microRNA targets for hsa-miR-205 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-27a View Gene Set 0.001282 518 0.01017 66 microRNA targets for hsa-miR-27a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-384 View Gene Set 0.001232 251 0.01017 66 microRNA targets for hsa-miR-384 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-634 View Gene Set 0.001271 215 0.01017 66 microRNA targets for hsa-miR-634 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-873 View Gene Set 0.001342 273 0.01045 71 microRNA targets for hsa-miR-873 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-130a View Gene Set 0.001401 440 0.01061 72 microRNA targets for hsa-miR-130a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-454 View Gene Set 0.001397 442 0.01061 72 microRNA targets for hsa-miR-454 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-374b View Gene Set 0.001839 902 0.01374 74 microRNA targets for hsa-miR-374b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-582-3p View Gene Set 0.00203 231 0.01497 75 microRNA targets for hsa-miR-582-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-330-3p View Gene Set 0.002318 682 0.01665 76 microRNA targets for hsa-miR-330-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-595 View Gene Set 0.002319 245 0.01665 76 microRNA targets for hsa-miR-595 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-520e View Gene Set 0.002582 443 0.01831 78 microRNA targets for hsa-miR-520e from mirtarget2.targets www.mirbase.org...
Null hsa-miR-144 View Gene Set 0.002771 649 0.01843 79 microRNA targets for hsa-miR-144 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-203 View Gene Set 0.002644 754 0.01843 79 microRNA targets for hsa-miR-203 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-206 View Gene Set 0.002696 358 0.01843 79 microRNA targets for hsa-miR-206 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-455-3p View Gene Set 0.002765 184 0.01843 79 microRNA targets for hsa-miR-455-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-520a-3p View Gene Set 0.002799 468 0.01843 79 microRNA targets for hsa-miR-520a-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-938 View Gene Set 0.002727 97 0.01843 79 microRNA targets for hsa-miR-938 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-211 View Gene Set 0.002941 549 0.01913 85 microRNA targets for hsa-miR-211 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-590-5p View Gene Set 0.003095 275 0.01967 86 microRNA targets for hsa-miR-590-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-892b View Gene Set 0.00308 290 0.01967 86 microRNA targets for hsa-miR-892b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-216a View Gene Set 0.003226 352 0.02008 88 microRNA targets for hsa-miR-216a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-30e View Gene Set 0.003268 693 0.02008 88 microRNA targets for hsa-miR-30e from mirtarget2.targets www.mirbase.org...
Null hsa-miR-874 View Gene Set 0.003252 181 0.02008 88 microRNA targets for hsa-miR-874 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-30d View Gene Set 0.00346 694 0.02058 91 microRNA targets for hsa-miR-30d from mirtarget2.targets www.mirbase.org...
Null hsa-miR-539 View Gene Set 0.003415 601 0.02058 91 microRNA targets for hsa-miR-539 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-587 View Gene Set 0.003457 590 0.02058 91 microRNA targets for hsa-miR-587 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-582-5p View Gene Set 0.003578 526 0.02105 94 microRNA targets for hsa-miR-582-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-450b-5p View Gene Set 0.003909 691 0.02276 95 microRNA targets for hsa-miR-450b-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-19b View Gene Set 0.004162 536 0.02397 96 microRNA targets for hsa-miR-19b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-301a View Gene Set 0.004247 448 0.02421 97 microRNA targets for hsa-miR-301a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-188-5p View Gene Set 0.004481 265 0.02528 98 microRNA targets for hsa-miR-188-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-30a View Gene Set 0.004587 680 0.02537 99 microRNA targets for hsa-miR-30a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-520b View Gene Set 0.004573 451 0.02537 99 microRNA targets for hsa-miR-520b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-340 View Gene Set 0.00472 874 0.02539 101 microRNA targets for hsa-miR-340 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-656 View Gene Set 0.00473 876 0.02539 101 microRNA targets for hsa-miR-656 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-885-5p View Gene Set 0.004681 167 0.02539 101 microRNA targets for hsa-miR-885-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-301b View Gene Set 0.004858 442 0.02583 104 microRNA targets for hsa-miR-301b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-212 View Gene Set 0.005127 314 0.027 105 microRNA targets for hsa-miR-212 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-105 View Gene Set 0.005221 524 0.02724 106 microRNA targets for hsa-miR-105 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-609 View Gene Set 0.005556 85 0.02871 107 microRNA targets for hsa-miR-609 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-381 View Gene Set 0.005952 544 0.03047 108 microRNA targets for hsa-miR-381 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-1 View Gene Set 0.006019 342 0.03053 109 microRNA targets for hsa-miR-1 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-520c-3p View Gene Set 0.006216 452 0.03125 110 microRNA targets for hsa-miR-520c-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-483-3p View Gene Set 0.006708 124 0.03342 111 microRNA targets for hsa-miR-483-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-204 View Gene Set 0.007126 538 0.03495 112 microRNA targets for hsa-miR-204 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-338-5p View Gene Set 0.007147 948 0.03495 112 microRNA targets for hsa-miR-338-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-888 View Gene Set 0.007204 450 0.03495 112 microRNA targets for hsa-miR-888 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-520d-3p View Gene Set 0.007314 456 0.03517 115 microRNA targets for hsa-miR-520d-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-802 View Gene Set 0.007612 428 0.03629 116 microRNA targets for hsa-miR-802 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-142-5p View Gene Set 0.00796 727 0.03762 117 microRNA targets for hsa-miR-142-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-500 View Gene Set 0.008445 378 0.03958 118 microRNA targets for hsa-miR-500 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-155 View Gene Set 0.00861 427 0.03968 119 microRNA targets for hsa-miR-155 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-768-3p View Gene Set 0.008544 333 0.03968 119 microRNA targets for hsa-miR-768-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-151-5p View Gene Set 0.009069 27 0.04133 121 microRNA targets for hsa-miR-151-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-487a View Gene Set 0.009118 267 0.04133 121 microRNA targets for hsa-miR-487a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-300 View Gene Set 0.009586 528 0.04278 123 microRNA targets for hsa-miR-300 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-515-5p View Gene Set 0.009593 396 0.04278 123 microRNA targets for hsa-miR-515-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-630 View Gene Set 0.009852 248 0.04359 125 microRNA targets for hsa-miR-630 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-519b-3p View Gene Set 0.0103 484 0.04519 126 microRNA targets for hsa-miR-519b-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-549 View Gene Set 0.0104 200 0.04529 127 microRNA targets for hsa-miR-549 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-30b View Gene Set 0.01069 670 0.04614 128 microRNA targets for hsa-miR-30b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-519a View Gene Set 0.01081 486 0.04614 128 microRNA targets for hsa-miR-519a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-631 View Gene Set 0.01085 96 0.04614 128 microRNA targets for hsa-miR-631 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-628-3p View Gene Set 0.01109 196 0.04682 131 microRNA targets for hsa-miR-628-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-579 View Gene Set 0.01119 625 0.04687 132 microRNA targets for hsa-miR-579 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-220b View Gene Set 0.01172 210 0.04872 133 microRNA targets for hsa-miR-220b from mirtarget2.targets www.mirbase.org...

Gene Set Collection: pictar.targets

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null hsa-miR-1 View Gene Set 0.0001343 408 0.007966 1 microRNA targets for hsa-miR-1 from pictar.targets www.mirbase.org...
Null hsa-miR-142-3p View Gene Set 0.0001326 166 0.007966 1 microRNA targets for hsa-miR-142-3p from pictar.targets www.mirbase.org...
Null hsa-miR-206 View Gene Set 6.708e-05 404 0.007966 1 microRNA targets for hsa-miR-206 from pictar.targets www.mirbase.org...
Null hsa-miR-320 View Gene Set 0.0004357 405 0.01939 4 microRNA targets for hsa-miR-320 from pictar.targets www.mirbase.org...

Gene Set Collection: tarbase.targets

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null hsa-miR-124 View Gene Set 5.433e-08 133 2.771e-06 1 microRNA targets for hsa-miR-124 from tarbase.targets www.mirbase.org...
Null hsa-miR-1 View Gene Set 2.145e-06 149 5.469e-05 2 microRNA targets for hsa-miR-1 from tarbase.targets www.mirbase.org...
Null hsa-miR-373 View Gene Set 2.376e-05 40 0.000404 3 microRNA targets for hsa-miR-373 from tarbase.targets www.mirbase.org...
Null hsa-let-7b View Gene Set 4.64e-05 83 0.0005915 4 microRNA targets for hsa-let-7b from tarbase.targets www.mirbase.org...
Null hsa-miR-30a-3p View Gene Set 0.001424 7 0.01452 5 microRNA targets for hsa-miR-30a-3p from tarbase.targets www.mirbase.org...

Gene Set Collection: targetscan.targets

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null hsa-miR-124 View Gene Set 1.248e-06 1299 0.0001523 1 microRNA targets for hsa-miR-124 from targetscan.targets www.mirbase.org...
Null hsa-miR-506 View Gene Set 1.248e-06 1299 0.0001523 1 microRNA targets for hsa-miR-506 from targetscan.targets www.mirbase.org...
Null hsa-miR-1 View Gene Set 3.972e-06 583 0.0001686 3 microRNA targets for hsa-miR-1 from targetscan.targets www.mirbase.org...
Null hsa-miR-205 View Gene Set 4.147e-06 288 0.0001686 3 microRNA targets for hsa-miR-205 from targetscan.targets www.mirbase.org...
Null hsa-miR-206 View Gene Set 3.972e-06 583 0.0001686 3 microRNA targets for hsa-miR-206 from targetscan.targets www.mirbase.org...
Null hsa-miR-613 View Gene Set 3.972e-06 583 0.0001686 3 microRNA targets for hsa-miR-613 from targetscan.targets www.mirbase.org...
Null hsa-miR-30a View Gene Set 9.66e-05 1080 0.002143 7 microRNA targets for hsa-miR-30a from targetscan.targets www.mirbase.org...
Null hsa-miR-30b View Gene Set 9.66e-05 1080 0.002143 7 microRNA targets for hsa-miR-30b from targetscan.targets www.mirbase.org...
Null hsa-miR-30c View Gene Set 9.66e-05 1080 0.002143 7 microRNA targets for hsa-miR-30c from targetscan.targets www.mirbase.org...
Null hsa-miR-30d View Gene Set 9.66e-05 1080 0.002143 7 microRNA targets for hsa-miR-30d from targetscan.targets www.mirbase.org...
Null hsa-miR-30e View Gene Set 9.66e-05 1080 0.002143 7 microRNA targets for hsa-miR-30e from targetscan.targets www.mirbase.org...
Null hsa-miR-193a-3p View Gene Set 0.0002394 142 0.004493 12 microRNA targets for hsa-miR-193a-3p from targetscan.targets www.mirbase.org...
Null hsa-miR-193b View Gene Set 0.0002394 142 0.004493 12 microRNA targets for hsa-miR-193b from targetscan.targets www.mirbase.org...
Null hsa-miR-183 View Gene Set 0.0002719 295 0.004738 14 microRNA targets for hsa-miR-183 from targetscan.targets www.mirbase.org...
Null hsa-miR-9 View Gene Set 0.0004233 936 0.006886 15 microRNA targets for hsa-miR-9 from targetscan.targets www.mirbase.org...
Null hsa-miR-142-3p View Gene Set 0.0004816 250 0.007345 16 microRNA targets for hsa-miR-142-3p from targetscan.targets www.mirbase.org...
Null hsa-miR-340 View Gene Set 0.00145 963 0.02081 17 microRNA targets for hsa-miR-340 from targetscan.targets www.mirbase.org...
Null hsa-miR-590-3p View Gene Set 0.001988 796 0.02695 18 microRNA targets for hsa-miR-590-3p from targetscan.targets www.mirbase.org...
Null hsa-miR-320a View Gene Set 0.004132 539 0.04383 19 microRNA targets for hsa-miR-320a from targetscan.targets www.mirbase.org...
Null hsa-miR-320b View Gene Set 0.004132 539 0.04383 19 microRNA targets for hsa-miR-320b from targetscan.targets www.mirbase.org...
Null hsa-miR-320c View Gene Set 0.004132 539 0.04383 19 microRNA targets for hsa-miR-320c from targetscan.targets www.mirbase.org...
Null hsa-miR-320d View Gene Set 0.004132 539 0.04383 19 microRNA targets for hsa-miR-320d from targetscan.targets www.mirbase.org...
Null hsa-miR-495 View Gene Set 0.004 570 0.04383 19 microRNA targets for hsa-miR-495 from targetscan.targets www.mirbase.org...
Null hsa-miR-433 View Gene Set 0.004847 207 0.04912 24 microRNA targets for hsa-miR-433 from targetscan.targets www.mirbase.org...
Null hsa-miR-451 View Gene Set 0.005033 14 0.04912 24 microRNA targets for hsa-miR-451 from targetscan.targets www.mirbase.org...

Gene Set Collection: miRNAtargetIntersection

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-106b View Gene Set 6.963e-06 372 0.00765 1 microRNA targets for miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-106b from miRNAtargetIntersection www.mirbase.org...
Null miranda.tarbase.targetscan.targetsIntersection.hsa-miR-124 View Gene Set 7.449e-06 52 0.00765 1 microRNA targets for miranda.tarbase.targetscan.targetsIntersection.hsa-miR-124 from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-20a View Gene Set 3.457e-05 268 0.008399 3 microRNA targets for miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-20a from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-124 View Gene Set 3.68e-05 243 0.008399 3 microRNA targets for miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-124 from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-17 View Gene Set 2.474e-05 384 0.008399 3 microRNA targets for miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-17 from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-20a View Gene Set 1.595e-05 390 0.008399 3 microRNA targets for miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-20a from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-20b View Gene Set 2.071e-05 394 0.008399 3 microRNA targets for miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-20b from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-519d View Gene Set 3.415e-05 360 0.008399 3 microRNA targets for miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-519d from miRNAtargetIntersection www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsIntersection.hsa-miR-369-3p View Gene Set 3.583e-05 37 0.008399 3 microRNA targets for mirbase.mirtarget2.pictar.targetsIntersection.hsa-miR-369-3p from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-181a View Gene Set 5.34e-05 113 0.009971 10 microRNA targets for miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-181a from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-93 View Gene Set 5.1e-05 381 0.009971 10 microRNA targets for miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-93 from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-106b View Gene Set 6.89e-05 257 0.01179 12 microRNA targets for miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-106b from miRNAtargetIntersection www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsIntersection.hsa-miR-124 View Gene Set 0.0001025 85 0.01619 13 microRNA targets for mirbase.mirtarget2.targetscan.targetsIntersection.hsa-miR-124 from miRNAtargetIntersection www.mirbase.org...
Null mirtarget2.pictar.targetscan.targetsIntersection.hsa-miR-106b View Gene Set 0.0001367 281 0.02005 14 microRNA targets for mirtarget2.pictar.targetscan.targetsIntersection.hsa-miR-106b from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-20b View Gene Set 0.0001466 272 0.02007 15 microRNA targets for miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-20b from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirbase.targetscan.targetsIntersection.hsa-miR-124 View Gene Set 0.0001645 116 0.02112 16 microRNA targets for miranda.mirbase.targetscan.targetsIntersection.hsa-miR-124 from miRNAtargetIntersection www.mirbase.org...
Null mirtarget2.tarbase.targetscan.targetsIntersection.hsa-miR-124 View Gene Set 0.0001788 48 0.0216 17 microRNA targets for mirtarget2.tarbase.targetscan.targetsIntersection.hsa-miR-124 from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-302c View Gene Set 0.0002333 96 0.02282 18 microRNA targets for miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-302c from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-93 View Gene Set 0.0002232 258 0.02282 18 microRNA targets for miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-93 from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-106a View Gene Set 0.0002069 389 0.02282 18 microRNA targets for miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-106a from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-205 View Gene Set 0.0002118 90 0.02282 18 microRNA targets for miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-205 from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-181c View Gene Set 0.0002517 120 0.0235 22 microRNA targets for miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-181c from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-340 View Gene Set 0.0002942 69 0.02533 23 microRNA targets for miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-340 from miRNAtargetIntersection www.mirbase.org...
Null mirtarget2.pictar.targetscan.targetsIntersection.hsa-miR-20a View Gene Set 0.000296 290 0.02533 23 microRNA targets for mirtarget2.pictar.targetscan.targetsIntersection.hsa-miR-20a from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirbase.pictar.targetsIntersection.hsa-miR-369-3p View Gene Set 0.0003484 46 0.0278 25 microRNA targets for miranda.mirbase.pictar.targetsIntersection.hsa-miR-369-3p from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-302a View Gene Set 0.0003655 102 0.0278 25 microRNA targets for miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-302a from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-506 View Gene Set 0.0003575 238 0.0278 25 microRNA targets for miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-506 from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-144 View Gene Set 0.0003957 101 0.02898 28 microRNA targets for miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-144 from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-548c-3p View Gene Set 0.0004092 167 0.02898 28 microRNA targets for miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-548c-3p from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-140-3p View Gene Set 0.0005134 35 0.0314 30 microRNA targets for miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-140-3p from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-181b View Gene Set 0.0005657 119 0.0314 30 microRNA targets for miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-181b from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-181d View Gene Set 0.0005562 122 0.0314 30 microRNA targets for miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-181d from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-369-3p View Gene Set 0.0004999 93 0.0314 30 microRNA targets for miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-369-3p from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-30d View Gene Set 0.000551 379 0.0314 30 microRNA targets for miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-30d from miRNAtargetIntersection www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsIntersection.hsa-miR-506 View Gene Set 0.0004732 86 0.0314 30 microRNA targets for mirbase.mirtarget2.targetscan.targetsIntersection.hsa-miR-506 from miRNAtargetIntersection www.mirbase.org...
Null mirtarget2.pictar.targetscan.targetsIntersection.hsa-miR-302a View Gene Set 0.0005451 93 0.0314 30 microRNA targets for mirtarget2.pictar.targetscan.targetsIntersection.hsa-miR-302a from miRNAtargetIntersection www.mirbase.org...
Null mirtarget2.pictar.targetscan.targetsIntersection.hsa-miR-93 View Gene Set 0.0004772 281 0.0314 30 microRNA targets for mirtarget2.pictar.targetscan.targetsIntersection.hsa-miR-93 from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-302d View Gene Set 0.0007359 109 0.03687 38 microRNA targets for miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-302d from miRNAtargetIntersection www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsIntersection.hsa-miR-181b View Gene Set 0.0007157 71 0.03687 38 microRNA targets for mirbase.mirtarget2.targetscan.targetsIntersection.hsa-miR-181b from miRNAtargetIntersection www.mirbase.org...
Null mirtarget2.pictar.targetscan.targetsIntersection.hsa-miR-20b View Gene Set 0.0006975 291 0.03687 38 microRNA targets for mirtarget2.pictar.targetscan.targetsIntersection.hsa-miR-20b from miRNAtargetIntersection www.mirbase.org...
Null mirtarget2.pictar.targetscan.targetsIntersection.hsa-miR-302c View Gene Set 0.000727 88 0.03687 38 microRNA targets for mirtarget2.pictar.targetscan.targetsIntersection.hsa-miR-302c from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-9 View Gene Set 0.0007724 192 0.03777 42 microRNA targets for miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-9 from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-193b View Gene Set 0.0008124 24 0.03797 43 microRNA targets for miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-193b from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirbase.targetscan.targetsIntersection.hsa-miR-9 View Gene Set 0.0008133 77 0.03797 43 microRNA targets for miranda.mirbase.targetscan.targetsIntersection.hsa-miR-9 from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-105 View Gene Set 0.0009139 63 0.04171 45 microRNA targets for miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-105 from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-495 View Gene Set 0.001003 156 0.04382 46 microRNA targets for miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-495 from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-214 View Gene Set 0.0009819 52 0.04382 46 microRNA targets for miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-214 from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirbase.targetscan.targetsIntersection.hsa-miR-374b View Gene Set 0.001158 49 0.04957 48 microRNA targets for miranda.mirbase.targetscan.targetsIntersection.hsa-miR-374b from miRNAtargetIntersection www.mirbase.org...

Gene Set Collection: miRNAtargetUnion

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-548c-3p View Gene Set 1.605e-13 4092 3.714e-10 1 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-548c-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-561 View Gene Set 9.823e-11 3650 1.136e-07 2 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-561 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-548d-3p View Gene Set 2.379e-10 3139 1.835e-07 3 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-548d-3p from miRNAtargetUnion www.mirbase.org...
Null mirbase.tarbase.targetscan.targetsUnion.hsa-miR-1 View Gene Set 3.787e-10 1233 2.191e-07 4 microRNA targets for mirbase.tarbase.targetscan.targetsUnion.hsa-miR-1 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-590-3p View Gene Set 1.755e-09 2774 6.767e-07 5 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-590-3p from miRNAtargetUnion www.mirbase.org...
Null mirbase.pictar.targetscan.targetsUnion.hsa-miR-1 View Gene Set 1.628e-09 1256 6.767e-07 5 microRNA targets for mirbase.pictar.targetscan.targetsUnion.hsa-miR-1 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-590-3p View Gene Set 4.242e-09 4554 1.016e-06 7 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-590-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-590-3p View Gene Set 4.391e-09 4420 1.016e-06 7 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-590-3p from miRNAtargetUnion www.mirbase.org...
Null mirbase.pictar.tarbase.targetsUnion.hsa-miR-1 View Gene Set 4.022e-09 1078 1.016e-06 7 microRNA targets for mirbase.pictar.tarbase.targetsUnion.hsa-miR-1 from miRNAtargetUnion www.mirbase.org...
Null pictar.tarbase.targetscan.targetsUnion.hsa-miR-1 View Gene Set 4.244e-09 783 1.016e-06 7 microRNA targets for pictar.tarbase.targetscan.targetsUnion.hsa-miR-1 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-548b-5p View Gene Set 5.854e-09 3963 1.232e-06 11 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-548b-5p from miRNAtargetUnion www.mirbase.org...
Null mirtarget2.tarbase.targetscan.targetsUnion.hsa-miR-1 View Gene Set 1.149e-08 832 2.215e-06 12 microRNA targets for mirtarget2.tarbase.targetscan.targetsUnion.hsa-miR-1 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-548a-5p View Gene Set 1.741e-08 3746 3.086e-06 13 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-548a-5p from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-1 View Gene Set 1.938e-08 1281 3.086e-06 13 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-1 from miRNAtargetUnion www.mirbase.org...
Null mirbase.pictar.targetscan.targetsUnion.hsa-miR-206 View Gene Set 2.001e-08 1275 3.086e-06 13 microRNA targets for mirbase.pictar.targetscan.targetsUnion.hsa-miR-206 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-548a-3p View Gene Set 2.656e-08 3211 3.842e-06 16 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-548a-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-548c-5p View Gene Set 3.192e-08 3706 4.345e-06 17 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-548c-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-200b View Gene Set 3.977e-08 2373 5.113e-06 18 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-200b from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-26b View Gene Set 4.2e-08 2088 5.115e-06 19 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-26b from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-200b View Gene Set 5.258e-08 2444 5.953e-06 20 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-200b from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-655 View Gene Set 5.403e-08 2490 5.953e-06 20 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-655 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-522 View Gene Set 7.528e-08 2524 7.918e-06 22 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-522 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-429 View Gene Set 8.623e-08 2506 7.936e-06 23 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-429 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-548d-5p View Gene Set 7.899e-08 4039 7.936e-06 23 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-548d-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-26b View Gene Set 9.603e-08 2177 7.936e-06 23 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-26b from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.tarbase.targetsUnion.hsa-miR-1 View Gene Set 9.099e-08 1008 7.936e-06 23 microRNA targets for mirbase.mirtarget2.tarbase.targetsUnion.hsa-miR-1 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-206 View Gene Set 8.797e-08 1315 7.936e-06 23 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-206 from miRNAtargetUnion www.mirbase.org...
Null mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-206 View Gene Set 9.339e-08 867 7.936e-06 23 microRNA targets for mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-206 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-200c View Gene Set 1.066e-07 2480 8.505e-06 29 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-200c from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-570 View Gene Set 1.232e-07 3769 8.91e-06 30 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-570 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-26b View Gene Set 1.22e-07 1361 8.91e-06 30 microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-26b from miRNAtargetUnion www.mirbase.org...
Null pictar.tarbase.targetscan.targetsUnion.hsa-miR-206 View Gene Set 1.161e-07 702 8.91e-06 30 microRNA targets for pictar.tarbase.targetscan.targetsUnion.hsa-miR-206 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-200c View Gene Set 1.323e-07 2410 9.274e-06 33 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-200c from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-26a View Gene Set 1.632e-07 1388 1.111e-05 34 microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-26a from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.tarbase.targetsUnion.hsa-miR-200c View Gene Set 2.087e-07 2316 1.31e-05 35 microRNA targets for miranda.mirbase.tarbase.targetsUnion.hsa-miR-200c from miRNAtargetUnion www.mirbase.org...
Null mirbase.tarbase.targetscan.targetsUnion.hsa-miR-206 View Gene Set 2.095e-07 1175 1.31e-05 35 microRNA targets for mirbase.tarbase.targetscan.targetsUnion.hsa-miR-206 from miRNAtargetUnion www.mirbase.org...
Null mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-1 View Gene Set 2.038e-07 860 1.31e-05 35 microRNA targets for mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-1 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-590-3p View Gene Set 2.833e-07 4159 1.725e-05 38 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-590-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-142-5p View Gene Set 4.175e-07 2649 2.477e-05 39 microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-142-5p from miRNAtargetUnion www.mirbase.org...
Null mirtarget2.tarbase.targetscan.targetsUnion.hsa-miR-124 View Gene Set 4.502e-07 1448 2.605e-05 40 microRNA targets for mirtarget2.tarbase.targetscan.targetsUnion.hsa-miR-124 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-200c View Gene Set 4.899e-07 2095 2.765e-05 41 microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-200c from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-200b View Gene Set 5.94e-07 2083 3.273e-05 42 microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-200b from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.tarbase.targetsUnion.hsa-miR-200c View Gene Set 7.52e-07 2013 3.783e-05 43 microRNA targets for miranda.mirtarget2.tarbase.targetsUnion.hsa-miR-200c from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-1 View Gene Set 7.272e-07 1160 3.783e-05 43 microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-1 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.tarbase.targetsUnion.hsa-miR-124 View Gene Set 7.509e-07 1174 3.783e-05 43 microRNA targets for mirbase.mirtarget2.tarbase.targetsUnion.hsa-miR-124 from miRNAtargetUnion www.mirbase.org...
Null mirtarget2.tarbase.targetscan.targetsUnion.hsa-miR-206 View Gene Set 7.421e-07 768 3.783e-05 43 microRNA targets for mirtarget2.tarbase.targetscan.targetsUnion.hsa-miR-206 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.tarbase.targetsUnion.hsa-miR-26a View Gene Set 1.039e-06 1103 5.113e-05 47 microRNA targets for mirbase.mirtarget2.tarbase.targetsUnion.hsa-miR-26a from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-320 View Gene Set 1.151e-06 1474 5.549e-05 48 microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-320 from miRNAtargetUnion www.mirbase.org...
Null miranda.pictar.tarbase.targetsUnion.hsa-miR-200c View Gene Set 1.215e-06 1905 5.666e-05 49 microRNA targets for miranda.pictar.tarbase.targetsUnion.hsa-miR-200c from miRNAtargetUnion www.mirbase.org...
Null mirbase.pictar.tarbase.targetsUnion.hsa-miR-206 View Gene Set 1.224e-06 1015 5.666e-05 49 microRNA targets for mirbase.pictar.tarbase.targetsUnion.hsa-miR-206 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-607 View Gene Set 1.265e-06 3059 5.71e-05 51 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-607 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-142-3p View Gene Set 1.283e-06 1810 5.71e-05 51 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-142-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-559 View Gene Set 1.398e-06 3456 6.104e-05 53 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-559 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.tarbase.targetsUnion.hsa-miR-124 View Gene Set 1.425e-06 1518 6.107e-05 54 microRNA targets for miranda.mirtarget2.tarbase.targetsUnion.hsa-miR-124 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-802 View Gene Set 1.512e-06 2387 6.363e-05 55 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-802 from miRNAtargetUnion www.mirbase.org...
Null mirtarget2.pictar.tarbase.targetsUnion.hsa-miR-1 View Gene Set 1.546e-06 703 6.39e-05 56 microRNA targets for mirtarget2.pictar.tarbase.targetsUnion.hsa-miR-1 from miRNAtargetUnion www.mirbase.org...
Null mirbase.pictar.tarbase.targetsUnion.hsa-miR-26a View Gene Set 1.59e-06 1142 6.455e-05 57 microRNA targets for mirbase.pictar.tarbase.targetsUnion.hsa-miR-26a from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-206 View Gene Set 1.63e-06 1189 6.504e-05 58 microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-206 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-524-5p View Gene Set 1.742e-06 3213 6.717e-05 59 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-524-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-26b View Gene Set 1.728e-06 1882 6.717e-05 59 microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-26b from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-300 View Gene Set 1.836e-06 2254 6.963e-05 61 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-300 from miRNAtargetUnion www.mirbase.org...
Null miranda.pictar.targetscan.targetsUnion.hsa-miR-206 View Gene Set 1.984e-06 1924 7.403e-05 62 microRNA targets for miranda.pictar.targetscan.targetsUnion.hsa-miR-206 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-26b View Gene Set 2.201e-06 2211 8.084e-05 63 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-26b from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-146a View Gene Set 2.256e-06 1953 8.157e-05 64 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-146a from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-944 View Gene Set 2.717e-06 3201 9.527e-05 65 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-944 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-146a View Gene Set 2.709e-06 1911 9.527e-05 65 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-146a from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-421 View Gene Set 2.868e-06 2238 9.904e-05 67 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-421 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-142-3p View Gene Set 3.074e-06 1778 0.0001024 68 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-142-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-142-3p View Gene Set 3.076e-06 1792 0.0001024 68 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-142-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-206 View Gene Set 3.098e-06 2208 0.0001024 68 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-206 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.tarbase.targetsUnion.hsa-miR-124 View Gene Set 3.199e-06 1943 0.0001043 71 microRNA targets for miranda.mirbase.tarbase.targetsUnion.hsa-miR-124 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-633 View Gene Set 3.288e-06 1943 0.0001057 72 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-633 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-142-5p View Gene Set 3.461e-06 2931 0.0001082 73 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-142-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.tarbase.targetsUnion.hsa-miR-1 View Gene Set 3.427e-06 2270 0.0001082 73 microRNA targets for miranda.mirbase.tarbase.targetsUnion.hsa-miR-1 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-1 View Gene Set 3.962e-06 2328 0.0001207 75 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-1 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-206 View Gene Set 3.965e-06 2269 0.0001207 75 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-206 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-26a View Gene Set 4.136e-06 2034 0.0001243 77 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-26a from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-199a-3p View Gene Set 4.232e-06 1869 0.0001255 78 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-199a-3p from miRNAtargetUnion www.mirbase.org...
Null mirbase.tarbase.targetscan.targetsUnion.hsa-miR-124 View Gene Set 4.525e-06 1909 0.0001325 79 microRNA targets for mirbase.tarbase.targetscan.targetsUnion.hsa-miR-124 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-146b-5p View Gene Set 4.782e-06 1913 0.0001383 80 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-146b-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-146a View Gene Set 5.02e-06 1921 0.0001434 81 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-146a from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-26a View Gene Set 5.097e-06 2119 0.0001438 82 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-26a from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-300 View Gene Set 5.383e-06 2113 0.0001501 83 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-300 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-142-5p View Gene Set 5.599e-06 2782 0.0001542 84 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-142-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-454 View Gene Set 5.916e-06 2494 0.000161 85 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-454 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-421 View Gene Set 6.542e-06 2222 0.000176 86 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-421 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-146a View Gene Set 7.116e-06 1486 0.000183 87 microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-146a from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-495 View Gene Set 7.03e-06 2518 0.000183 87 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-495 from miRNAtargetUnion www.mirbase.org...
Null miranda.pictar.tarbase.targetsUnion.hsa-miR-1 View Gene Set 7.098e-06 2000 0.000183 87 microRNA targets for miranda.pictar.tarbase.targetsUnion.hsa-miR-1 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-26b View Gene Set 7.02e-06 1418 0.000183 87 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-26b from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-374a View Gene Set 8.272e-06 2340 0.0002081 91 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-374a from miRNAtargetUnion www.mirbase.org...
Null mirbase.pictar.tarbase.targetsUnion.hsa-miR-222 View Gene Set 8.26e-06 899 0.0002081 91 microRNA targets for mirbase.pictar.tarbase.targetsUnion.hsa-miR-222 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-1 View Gene Set 8.369e-06 2393 0.0002082 93 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-1 from miRNAtargetUnion www.mirbase.org...
Null mirbase.pictar.targetscan.targetsUnion.hsa-miR-222 View Gene Set 8.689e-06 1089 0.0002139 94 microRNA targets for mirbase.pictar.targetscan.targetsUnion.hsa-miR-222 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-891b View Gene Set 8.899e-06 1644 0.0002145 95 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-891b from miRNAtargetUnion www.mirbase.org...
Null miranda.tarbase.targetscan.targetsUnion.hsa-miR-1 View Gene Set 8.85e-06 2072 0.0002145 95 microRNA targets for miranda.tarbase.targetscan.targetsUnion.hsa-miR-1 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-181a View Gene Set 9.113e-06 2345 0.0002152 97 microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-181a from miRNAtargetUnion www.mirbase.org...
Null mirtarget2.pictar.tarbase.targetsUnion.hsa-miR-200a View Gene Set 9.063e-06 682 0.0002152 97 microRNA targets for mirtarget2.pictar.tarbase.targetsUnion.hsa-miR-200a from miRNAtargetUnion www.mirbase.org...
Null miranda.tarbase.targetscan.targetsUnion.hsa-miR-124 View Gene Set 9.458e-06 2020 0.0002211 99 microRNA targets for miranda.tarbase.targetscan.targetsUnion.hsa-miR-124 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-300 View Gene Set 9.788e-06 2370 0.0002265 100 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-300 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-888 View Gene Set 1.144e-05 1983 0.0002622 101 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-888 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-335 View Gene Set 1.189e-05 2172 0.0002628 102 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-335 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-454 View Gene Set 1.18e-05 2596 0.0002628 102 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-454 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-340 View Gene Set 1.192e-05 3195 0.0002628 102 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-340 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-222 View Gene Set 1.179e-05 1027 0.0002628 102 microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-222 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-146b-5p View Gene Set 1.212e-05 1889 0.0002645 106 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-146b-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-146a View Gene Set 1.277e-05 1490 0.0002734 107 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-146a from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-206 View Gene Set 1.288e-05 1942 0.0002734 107 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-206 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-494 View Gene Set 1.275e-05 2251 0.0002734 107 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-494 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-216b View Gene Set 1.312e-05 1976 0.000276 110 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-216b from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-374a View Gene Set 1.325e-05 2500 0.0002763 111 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-374a from miRNAtargetUnion www.mirbase.org...
Null miranda.pictar.tarbase.targetsUnion.hsa-miR-206 View Gene Set 1.367e-05 1776 0.0002825 112 microRNA targets for miranda.pictar.tarbase.targetsUnion.hsa-miR-206 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-301a View Gene Set 1.392e-05 2688 0.0002837 113 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-301a from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-301b View Gene Set 1.398e-05 2655 0.0002837 113 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-301b from miRNAtargetUnion www.mirbase.org...
Null miranda.tarbase.targetscan.targetsUnion.hsa-miR-206 View Gene Set 1.418e-05 1845 0.0002853 115 microRNA targets for miranda.tarbase.targetscan.targetsUnion.hsa-miR-206 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-200a View Gene Set 1.473e-05 1393 0.0002938 116 microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-200a from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-335 View Gene Set 1.556e-05 1754 0.0003078 117 microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-335 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-454 View Gene Set 1.627e-05 1460 0.0003191 118 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-454 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.tarbase.targetsUnion.hsa-miR-26a View Gene Set 1.65e-05 1896 0.0003208 119 microRNA targets for miranda.mirbase.tarbase.targetsUnion.hsa-miR-26a from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-124 View Gene Set 1.774e-05 2458 0.0003418 120 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-124 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-124 View Gene Set 1.787e-05 1965 0.0003418 120 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-124 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-206 View Gene Set 1.834e-05 1890 0.0003478 122 microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-206 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-579 View Gene Set 1.869e-05 2479 0.0003517 123 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-579 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-496 View Gene Set 1.939e-05 1171 0.0003618 124 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-496 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.tarbase.targetsUnion.hsa-miR-23a View Gene Set 1.993e-05 2178 0.000362 125 microRNA targets for miranda.mirtarget2.tarbase.targetsUnion.hsa-miR-23a from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-19a View Gene Set 1.976e-05 1473 0.000362 125 microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-19a from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-495 View Gene Set 2.002e-05 2114 0.000362 125 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-495 from miRNAtargetUnion www.mirbase.org...
Null mirbase.pictar.targetscan.targetsUnion.hsa-miR-26b View Gene Set 2.001e-05 1405 0.000362 125 microRNA targets for mirbase.pictar.targetscan.targetsUnion.hsa-miR-26b from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-335 View Gene Set 2.024e-05 1762 0.0003631 129 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-335 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-374a View Gene Set 2.064e-05 2329 0.0003674 130 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-374a from miRNAtargetUnion www.mirbase.org...
Null mirbase.pictar.targetscan.targetsUnion.hsa-miR-26a View Gene Set 2.088e-05 1416 0.0003689 131 microRNA targets for mirbase.pictar.targetscan.targetsUnion.hsa-miR-26a from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-19a View Gene Set 2.185e-05 1678 0.0003831 132 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-19a from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-181b View Gene Set 2.248e-05 1794 0.000391 133 microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-181b from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-369-3p View Gene Set 2.279e-05 2149 0.0003935 134 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-369-3p from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-26a View Gene Set 2.324e-05 1454 0.0003984 135 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-26a from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-124 View Gene Set 2.376e-05 1984 0.0004042 136 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-124 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-142-3p View Gene Set 2.544e-05 1299 0.0004297 137 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-142-3p from miRNAtargetUnion www.mirbase.org...
Null mirtarget2.pictar.tarbase.targetsUnion.hsa-miR-206 View Gene Set 2.602e-05 632 0.0004363 138 microRNA targets for mirtarget2.pictar.tarbase.targetsUnion.hsa-miR-206 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-124 View Gene Set 2.652e-05 2056 0.0004384 139 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-124 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-183 View Gene Set 2.644e-05 1395 0.0004384 139 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-183 from miRNAtargetUnion www.mirbase.org...
Null miranda.pictar.targetscan.targetsUnion.hsa-miR-1 View Gene Set 2.749e-05 2071 0.000448 141 microRNA targets for miranda.pictar.targetscan.targetsUnion.hsa-miR-1 from miRNAtargetUnion www.mirbase.org...
Null miranda.pictar.targetscan.targetsUnion.hsa-miR-146a View Gene Set 2.741e-05 1425 0.000448 141 microRNA targets for miranda.pictar.targetscan.targetsUnion.hsa-miR-146a from miRNAtargetUnion www.mirbase.org...
Null miranda.pictar.targetscan.targetsUnion.hsa-miR-142-3p View Gene Set 2.774e-05 1279 0.0004489 143 microRNA targets for miranda.pictar.targetscan.targetsUnion.hsa-miR-142-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-369-3p View Gene Set 2.925e-05 2089 0.00047 144 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-369-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-301a View Gene Set 2.98e-05 2387 0.0004755 145 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-301a from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-186 View Gene Set 3.049e-05 1788 0.0004833 146 microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-186 from miRNAtargetUnion www.mirbase.org...
Null mirbase.pictar.targetscan.targetsUnion.hsa-miR-30d View Gene Set 3.17e-05 1780 0.0004989 147 microRNA targets for mirbase.pictar.targetscan.targetsUnion.hsa-miR-30d from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-181c View Gene Set 3.203e-05 2256 0.0005007 148 microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-181c from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-27b View Gene Set 3.29e-05 2168 0.0005109 149 microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-27b from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-19a View Gene Set 3.343e-05 2708 0.0005157 150 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-19a from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-922 View Gene Set 3.393e-05 2731 0.0005199 151 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-922 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-144 View Gene Set 3.554e-05 2413 0.000541 152 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-144 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-335 View Gene Set 3.615e-05 2157 0.0005468 153 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-335 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-335 View Gene Set 3.68e-05 2171 0.0005504 154 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-335 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-183 View Gene Set 3.71e-05 1100 0.0005504 154 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-183 from miRNAtargetUnion www.mirbase.org...
Null mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-183 View Gene Set 3.706e-05 497 0.0005504 154 microRNA targets for mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-183 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-200a View Gene Set 3.796e-05 2264 0.0005595 157 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-200a from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-144 View Gene Set 3.863e-05 1652 0.0005658 158 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-144 from miRNAtargetUnion www.mirbase.org...
Null miranda.pictar.targetscan.targetsUnion.hsa-miR-340 View Gene Set 3.893e-05 2961 0.0005666 159 microRNA targets for miranda.pictar.targetscan.targetsUnion.hsa-miR-340 from miRNAtargetUnion www.mirbase.org...
Null miranda.pictar.targetscan.targetsUnion.hsa-miR-26b View Gene Set 3.941e-05 1890 0.00057 160 microRNA targets for miranda.pictar.targetscan.targetsUnion.hsa-miR-26b from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.tarbase.targetsUnion.hsa-miR-222 View Gene Set 4.013e-05 886 0.0005768 161 microRNA targets for mirbase.mirtarget2.tarbase.targetsUnion.hsa-miR-222 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-495 View Gene Set 4.057e-05 2495 0.0005796 162 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-495 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-142-3p View Gene Set 4.24e-05 1283 0.0005879 163 microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-142-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-23b View Gene Set 4.243e-05 2255 0.0005879 163 microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-23b from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-181d View Gene Set 4.158e-05 2688 0.0005879 163 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-181d from miRNAtargetUnion www.mirbase.org...
Null mirbase.tarbase.targetscan.targetsUnion.hsa-miR-26a View Gene Set 4.237e-05 1269 0.0005879 163 microRNA targets for mirbase.tarbase.targetscan.targetsUnion.hsa-miR-26a from miRNAtargetUnion www.mirbase.org...
Null mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-181c View Gene Set 4.222e-05 1529 0.0005879 163 microRNA targets for mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-181c from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-23b View Gene Set 4.497e-05 2593 0.0006147 168 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-23b from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-26b View Gene Set 4.51e-05 1906 0.0006147 168 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-26b from miRNAtargetUnion www.mirbase.org...
Null mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-205 View Gene Set 4.516e-05 635 0.0006147 168 microRNA targets for mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-205 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-19a View Gene Set 4.816e-05 2824 0.0006332 171 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-19a from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.tarbase.targetsUnion.hsa-miR-200a View Gene Set 4.804e-05 1304 0.0006332 171 microRNA targets for mirbase.mirtarget2.tarbase.targetsUnion.hsa-miR-200a from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-30d View Gene Set 4.682e-05 1845 0.0006332 171 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-30d from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-30e View Gene Set 4.746e-05 1855 0.0006332 171 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-30e from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-340 View Gene Set 4.785e-05 1956 0.0006332 171 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-340 from miRNAtargetUnion www.mirbase.org...
Null mirbase.tarbase.targetscan.targetsUnion.hsa-miR-222 View Gene Set 4.74e-05 982 0.0006332 171 microRNA targets for mirbase.tarbase.targetscan.targetsUnion.hsa-miR-222 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-606 View Gene Set 4.857e-05 1506 0.000635 177 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-606 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-216b View Gene Set 4.895e-05 1142 0.0006364 178 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-216b from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-146b-5p View Gene Set 4.969e-05 1486 0.0006397 179 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-146b-5p from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.tarbase.targetsUnion.hsa-miR-206 View Gene Set 4.976e-05 961 0.0006397 179 microRNA targets for mirbase.mirtarget2.tarbase.targetsUnion.hsa-miR-206 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-181b View Gene Set 5.008e-05 2510 0.0006403 181 microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-181b from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-181b View Gene Set 5.049e-05 2000 0.0006419 182 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-181b from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-301a View Gene Set 5.144e-05 2780 0.0006505 183 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-301a from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-181a View Gene Set 5.211e-05 2438 0.0006554 184 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-181a from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-23a View Gene Set 5.29e-05 2242 0.0006616 185 microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-23a from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-26a View Gene Set 5.392e-05 2154 0.0006709 186 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-26a from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-181a View Gene Set 5.466e-05 2602 0.0006763 187 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-181a from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-301b View Gene Set 5.739e-05 2745 0.0007026 188 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-301b from miRNAtargetUnion www.mirbase.org...
Null mirbase.pictar.targetscan.targetsUnion.hsa-miR-30c View Gene Set 5.729e-05 1796 0.0007026 188 microRNA targets for mirbase.pictar.targetscan.targetsUnion.hsa-miR-30c from miRNAtargetUnion www.mirbase.org...
Null miranda.pictar.targetscan.targetsUnion.hsa-miR-183 View Gene Set 5.827e-05 1399 0.000709 190 microRNA targets for miranda.pictar.targetscan.targetsUnion.hsa-miR-183 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-144 View Gene Set 5.852e-05 1553 0.000709 190 microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-144 from miRNAtargetUnion www.mirbase.org...
Null mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-142-3p View Gene Set 5.969e-05 361 0.0007194 192 microRNA targets for mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-142-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-30d View Gene Set 6.029e-05 2339 0.0007229 193 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-30d from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-23a View Gene Set 6.221e-05 2605 0.000742 194 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-23a from miRNAtargetUnion www.mirbase.org...
Null miranda.pictar.targetscan.targetsUnion.hsa-miR-335 View Gene Set 6.302e-05 1731 0.0007478 195 microRNA targets for miranda.pictar.targetscan.targetsUnion.hsa-miR-335 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-506 View Gene Set 6.452e-05 2120 0.0007617 196 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-506 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-222 View Gene Set 6.597e-05 1505 0.0007749 197 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-222 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-200a View Gene Set 6.811e-05 2347 0.0007842 198 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-200a from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-301b View Gene Set 6.807e-05 2363 0.0007842 198 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-301b from miRNAtargetUnion www.mirbase.org...
Null mirbase.pictar.targetscan.targetsUnion.hsa-miR-19a View Gene Set 6.738e-05 1633 0.0007842 198 microRNA targets for mirbase.pictar.targetscan.targetsUnion.hsa-miR-19a from miRNAtargetUnion www.mirbase.org...

Gene Set Collection: hprdBatch.UP

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null TGF-beta Receptor Signaling Pathway View Gene Set 2.744e-14 792 5.487e-13 1 From NetPath for TGF-beta Receptor Signaling Pathway www.netpath.org...
Null EGFR1 Signaling Pathway View Gene Set 6.186e-14 159 6.186e-13 2 From NetPath for EGFR1 Signaling Pathway www.netpath.org...
Null Androgen Receptor Signaling Pathway View Gene Set 6.378e-12 437 4.252e-11 3 From NetPath for Androgen Receptor Signaling Pathway www.netpath.org...
Null TNF-alpha Signaling Pathway View Gene Set 2.081e-09 728 1.04e-08 4 From NetPath for TNF-alpha Signaling Pathway www.netpath.org...
Null IL-1 Signaling Pathway View Gene Set 2.792e-07 154 1.117e-06 5 From NetPath for IL-1 Signaling Pathway www.netpath.org...
Null T Cell Receptor Signaling Pathway View Gene Set 0.0001342 291 0.0004474 6 From NetPath for T Cell Receptor Signaling Pathway www.netpath.org...
Null B Cell Receptor Signaling Pathway View Gene Set 0.002411 242 0.006889 7 From NetPath for B Cell Receptor Signaling Pathway www.netpath.org...
Null IL-2 Signaling Pathway View Gene Set 0.002787 408 0.006966 8 From NetPath for IL-2 Signaling Pathway www.netpath.org...
Null Wnt Signaling Pathway View Gene Set 0.01435 86 0.03189 9 From NetPath for Wnt Signaling Pathway www.netpath.org...

Gene Set Collection: hprdBatch.DOWN

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null TGF-beta Receptor Signaling Pathway View Gene Set 2.785e-08 739 5.292e-07 1 From NetPath for TGF-beta Receptor Signaling Pathway www.netpath.org...
Null TNF-alpha Signaling Pathway View Gene Set 1.408e-06 162 1.338e-05 2 From NetPath for TNF-alpha Signaling Pathway www.netpath.org...
Null EGFR1 Signaling Pathway View Gene Set 0.006449 98 0.03063 3 From NetPath for EGFR1 Signaling Pathway www.netpath.org...
Null IL-2 Signaling Pathway View Gene Set 0.005079 291 0.03063 3 From NetPath for IL-2 Signaling Pathway www.netpath.org...

Gene Set Collection: hprdBatch.DIFFERENT

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null TGF-beta Receptor Signaling Pathway View Gene Set 3.367e-14 1296 6.733e-13 1 From NetPath for TGF-beta Receptor Signaling Pathway www.netpath.org...
Null EGFR1 Signaling Pathway View Gene Set 3.35e-13 253 3.35e-12 2 From NetPath for EGFR1 Signaling Pathway www.netpath.org...
Null Androgen Receptor Signaling Pathway View Gene Set 3.98e-12 586 2.653e-11 3 From NetPath for Androgen Receptor Signaling Pathway www.netpath.org...
Null TNF-alpha Signaling Pathway View Gene Set 1.264e-11 863 6.318e-11 4 From NetPath for TNF-alpha Signaling Pathway www.netpath.org...
Null IL-1 Signaling Pathway View Gene Set 5.022e-05 233 0.0001674 5 From NetPath for IL-1 Signaling Pathway www.netpath.org...
Null T Cell Receptor Signaling Pathway View Gene Set 4.226e-05 349 0.0001674 5 From NetPath for T Cell Receptor Signaling Pathway www.netpath.org...
Null IL-2 Signaling Pathway View Gene Set 0.000192 685 0.0005485 7 From NetPath for IL-2 Signaling Pathway www.netpath.org...
Null B Cell Receptor Signaling Pathway View Gene Set 0.002741 418 0.006275 8 From NetPath for B Cell Receptor Signaling Pathway www.netpath.org...
Null IL-4 Signaling Pathway View Gene Set 0.002824 301 0.006275 8 From NetPath for IL-4 Signaling Pathway www.netpath.org...
Null Wnt Signaling Pathway View Gene Set 0.0216 110 0.04321 10 From NetPath for Wnt Signaling Pathway www.netpath.org...
Null Notch Signaling Pathway View Gene Set 0.02526 106 0.04592 11 From NetPath for Notch Signaling Pathway www.netpath.org...

Gene Set Collection: hprdManual.UP

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null EGFR1 View Gene Set 3.889e-10 105 9.334e-09 1 From NetPath for EGFR1 www.netpath.org...
Null TCR View Gene Set 1.528e-09 448 1.834e-08 2 From NetPath for TCR www.netpath.org...
Null IL1 View Gene Set 5.148e-06 85 4.119e-05 3 From NetPath for IL1 www.netpath.org...
Null TGF_beta_Receptor View Gene Set 7.292e-05 212 0.0004375 4 From NetPath for TGF_beta_Receptor www.netpath.org...
Null FSH View Gene Set 0.000796 164 0.003821 5 From NetPath for FSH www.netpath.org...
Null IL2 View Gene Set 0.002501 514 0.01 6 From NetPath for IL2 www.netpath.org...

Gene Set Collection: hprdManual.DOWN

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null TGF_beta_Receptor View Gene Set 1.595e-05 399 0.0001516 1 From NetPath for TGF_beta_Receptor www.netpath.org...
Null TSH View Gene Set 1.356e-05 45 0.0001516 1 From NetPath for TSH www.netpath.org...
Null TCR View Gene Set 0.001186 178 0.007514 3 From NetPath for TCR www.netpath.org...
Null IL2 View Gene Set 0.0066 297 0.03135 4 From NetPath for IL2 www.netpath.org...
Null Wnt View Gene Set 0.008997 10 0.03419 5 From NetPath for Wnt www.netpath.org...

Gene Set Collection: hprdManual.DIFFERENT

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null TCR View Gene Set 5.634e-11 605 1.352e-09 1 From NetPath for TCR www.netpath.org...
Null EGFR1 View Gene Set 1.024e-09 153 1.229e-08 2 From NetPath for EGFR1 www.netpath.org...
Null TGF_beta_Receptor View Gene Set 3.213e-08 594 2.57e-07 3 From NetPath for TGF_beta_Receptor www.netpath.org...
Null IL1 View Gene Set 0.0001011 120 0.0006068 4 From NetPath for IL1 www.netpath.org...
Null FSH View Gene Set 0.0002453 263 0.000981 5 From NetPath for FSH www.netpath.org...
Null IL2 View Gene Set 0.0002085 796 0.000981 5 From NetPath for IL2 www.netpath.org...
Null TSH View Gene Set 0.0009425 90 0.003231 7 From NetPath for TSH www.netpath.org...
Null IL4 View Gene Set 0.00378 269 0.01134 8 From NetPath for IL4 www.netpath.org...