AFA results for: tSAHAda4PC3

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Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
KEGG 00240	View Gene Set	1.662e-05	99	0.001185	1	Pyrimidine metabolism	www.genome.jp/d...
KEGG 01100	View Gene Set	1.336e-05	1120	0.001185	1	Metabolic pathways	www.genome.jp/d...
KEGG 03040	View Gene Set	1.032e-05	128	0.001185	1	Spliceosome	www.genome.jp/d...
KEGG 00970	View Gene Set	4.064e-05	41	0.002174	4	Aminoacyl-tRNA biosynthesis	www.genome.jp/d...
KEGG 04110	View Gene Set	0.0001256	128	0.005377	5	Cell cycle	www.genome.jp/d...
KEGG 00230	View Gene Set	0.0008611	161	0.02785	6	Purine metabolism	www.genome.jp/d...
KEGG 04145	View Gene Set	0.000911	158	0.02785	6	Phagosome	www.genome.jp/d...
KEGG 03020	View Gene Set	0.001425	29	0.03578	8	RNA polymerase	www.genome.jp/d...
KEGG 05222	View Gene Set	0.001505	84	0.03578	8	Small cell lung cancer	www.genome.jp/d...
KEGG 00290	View Gene Set	0.002035	11	0.03958	10	Valine leucine and isoleucine biosynthesis	www.genome.jp/d...
KEGG 05416	View Gene Set	0.001989	74	0.03958	10	Viral myocarditis	www.genome.jp/d...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
GO GO:0044424	View Gene Set	1.401e-50	10976	1.872e-46	1	intracellular part	amigo.geneontol...
GO GO:0005622	View Gene Set	5.574e-49	11329	3.723e-45	2	intracellular	amigo.geneontol...
GO GO:0043227	View Gene Set	1.028e-46	8383	4.577e-43	3	membrane-bounded organelle	amigo.geneontol...
GO GO:0043231	View Gene Set	2.199e-46	8376	7.343e-43	4	intracellular membrane-bounded organelle	amigo.geneontol...
GO GO:0043229	View Gene Set	2.463e-43	9346	6.581e-40	5	intracellular organelle	amigo.geneontol...
GO GO:0043226	View Gene Set	6.248e-43	9360	1.391e-39	6	organelle	amigo.geneontol...
GO GO:0005737	View Gene Set	2.622e-37	7676	5.005e-34	7	cytoplasm	amigo.geneontol...
GO GO:0044446	View Gene Set	9.959e-31	5019	1.663e-27	8	intracellular organelle part	amigo.geneontol...
GO GO:0044422	View Gene Set	2.058e-30	5089	3.055e-27	9	organelle part	amigo.geneontol...
GO GO:0005739	View Gene Set	3.25e-29	1274	4.342e-26	10	mitochondrion	amigo.geneontol...
GO GO:0031974	View Gene Set	7.834e-28	1917	9.514e-25	11	membrane-enclosed lumen	amigo.geneontol...
GO GO:0070013	View Gene Set	1.025e-27	1845	1.141e-24	12	intracellular organelle lumen	amigo.geneontol...
GO GO:0043233	View Gene Set	6.168e-27	1881	6.339e-24	13	organelle lumen	amigo.geneontol...
GO GO:0044444	View Gene Set	2.841e-25	5184	2.711e-22	14	cytoplasmic part	amigo.geneontol...
GO GO:0005634	View Gene Set	1.214e-20	5198	1.081e-17	15	nucleus	amigo.geneontol...
GO GO:0005515	View Gene Set	1.426e-20	8146	1.191e-17	16	protein binding	amigo.geneontol...
GO GO:0044428	View Gene Set	7.314e-20	1938	5.748e-17	17	nuclear part	amigo.geneontol...
GO GO:0044429	View Gene Set	7.567e-18	619	5.617e-15	18	mitochondrial part	amigo.geneontol...
GO GO:0031981	View Gene Set	9.941e-18	1518	6.99e-15	19	nuclear lumen	amigo.geneontol...
GO GO:0044237	View Gene Set	4.746e-16	7431	3.17e-13	20	cellular metabolic process	amigo.geneontol...
GO GO:0005759	View Gene Set	7.979e-16	223	4.732e-13	21	mitochondrial matrix	amigo.geneontol...
GO GO:0031980	View Gene Set	7.979e-16	223	4.732e-13	21	mitochondrial lumen	amigo.geneontol...
GO GO:0005488	View Gene Set	8.146e-16	12334	4.732e-13	21	binding	amigo.geneontol...
GO GO:0044260	View Gene Set	9.96e-16	5699	5.545e-13	24	cellular macromolecule metabolic process	amigo.geneontol...
GO GO:0030529	View Gene Set	7.703e-15	504	4.116e-12	25	ribonucleoprotein complex	amigo.geneontol...
GO GO:0032991	View Gene Set	8.184e-14	3237	4.205e-11	26	macromolecular complex	amigo.geneontol...
GO GO:0006396	View Gene Set	8.767e-14	578	4.338e-11	27	RNA processing	amigo.geneontol...
GO GO:0009987	View Gene Set	1.306e-13	11620	6.016e-11	28	cellular process	amigo.geneontol...
GO GO:0003723	View Gene Set	1.281e-13	732	6.016e-11	28	RNA binding	amigo.geneontol...
GO GO:0043228	View Gene Set	7.523e-13	2690	3.242e-10	30	non-membrane-bounded organelle	amigo.geneontol...
GO GO:0043232	View Gene Set	7.523e-13	2690	3.242e-10	30	intracellular non-membrane-bounded organelle	amigo.geneontol...
GO GO:0043170	View Gene Set	5.114e-12	6274	2.135e-09	32	macromolecule metabolic process	amigo.geneontol...
GO GO:0005730	View Gene Set	2.298e-11	734	9.304e-09	33	nucleolus	amigo.geneontol...
GO GO:0008152	View Gene Set	4.678e-11	8439	1.838e-08	34	metabolic process	amigo.geneontol...
GO GO:0006996	View Gene Set	6.385e-11	1501	2.437e-08	35	organelle organization	amigo.geneontol...
GO GO:0010467	View Gene Set	1.573e-10	3806	5.838e-08	36	gene expression	amigo.geneontol...
GO GO:0034660	View Gene Set	1.751e-10	236	6.321e-08	37	ncRNA metabolic process	amigo.geneontol...
GO GO:0022613	View Gene Set	2.151e-10	194	7.564e-08	38	ribonucleoprotein complex biogenesis	amigo.geneontol...
GO GO:0003676	View Gene Set	3.991e-10	2979	1.367e-07	39	nucleic acid binding	amigo.geneontol...
GO GO:0090304	View Gene Set	5.359e-10	3724	1.79e-07	40	nucleic acid metabolic process	amigo.geneontol...
GO GO:0005654	View Gene Set	5.871e-10	939	1.913e-07	41	nucleoplasm	amigo.geneontol...
GO GO:0034470	View Gene Set	6.101e-10	193	1.941e-07	42	ncRNA processing	amigo.geneontol...
GO GO:0016043	View Gene Set	9.681e-10	2937	3.008e-07	43	cellular component organization	amigo.geneontol...
GO GO:0005740	View Gene Set	1.178e-09	444	3.578e-07	44	mitochondrial envelope	amigo.geneontol...
GO GO:0044238	View Gene Set	1.727e-09	7629	5.129e-07	45	primary metabolic process	amigo.geneontol...
GO GO:0006412	View Gene Set	3.026e-09	412	8.789e-07	46	translation	amigo.geneontol...
GO GO:0006139	View Gene Set	3.367e-09	4294	9.571e-07	47	nucleobase nucleoside nucleotide and nucleic acid metabolic process	amigo.geneontol...
GO GO:0006807	View Gene Set	3.937e-09	4698	1.079e-06	48	nitrogen compound metabolic process	amigo.geneontol...
GO GO:0034641	View Gene Set	3.957e-09	4584	1.079e-06	48	cellular nitrogen compound metabolic process	amigo.geneontol...
GO GO:0007049	View Gene Set	4.512e-09	1006	1.206e-06	50	cell cycle	amigo.geneontol...
GO GO:0044267	View Gene Set	6.184e-09	2465	1.62e-06	51	cellular protein metabolic process	amigo.geneontol...
GO GO:0031966	View Gene Set	6.555e-09	420	1.684e-06	52	mitochondrial membrane	amigo.geneontol...
GO GO:0044085	View Gene Set	1.182e-08	1167	2.98e-06	53	cellular component biogenesis	amigo.geneontol...
GO GO:0008380	View Gene Set	1.22e-08	300	3.02e-06	54	RNA splicing	amigo.geneontol...
GO GO:0005829	View Gene Set	1.467e-08	1323	3.564e-06	55	cytosol	amigo.geneontol...
GO GO:0031967	View Gene Set	2.067e-08	672	4.93e-06	56	organelle envelope	amigo.geneontol...
GO GO:0006399	View Gene Set	2.991e-08	118	7.01e-06	57	tRNA metabolic process	amigo.geneontol...
GO GO:0034621	View Gene Set	3.216e-08	458	7.407e-06	58	cellular macromolecular complex subunit organization	amigo.geneontol...
GO GO:0003824	View Gene Set	3.575e-08	5198	8.094e-06	59	catalytic activity	amigo.geneontol...
GO GO:0009295	View Gene Set	5.754e-08	31	1.26e-05	60	nucleoid	amigo.geneontol...
GO GO:0042645	View Gene Set	5.754e-08	31	1.26e-05	60	mitochondrial nucleoid	amigo.geneontol...
GO GO:0007005	View Gene Set	7.157e-08	139	1.449e-05	62	mitochondrion organization	amigo.geneontol...
GO GO:0005623	View Gene Set	6.808e-08	15067	1.449e-05	62	cell	amigo.geneontol...
GO GO:0031090	View Gene Set	7.067e-08	1905	1.449e-05	62	organelle membrane	amigo.geneontol...
GO GO:0031975	View Gene Set	7.107e-08	685	1.449e-05	62	envelope	amigo.geneontol...
GO GO:0044464	View Gene Set	7.115e-08	15066	1.449e-05	62	cell part	amigo.geneontol...
GO GO:0000278	View Gene Set	9.358e-08	489	1.866e-05	67	mitotic cell cycle	amigo.geneontol...
GO GO:0043933	View Gene Set	1.24e-07	836	2.436e-05	68	macromolecular complex subunit organization	amigo.geneontol...
GO GO:0042254	View Gene Set	2.305e-07	130	4.462e-05	69	ribosome biogenesis	amigo.geneontol...
GO GO:0044249	View Gene Set	2.749e-07	4326	5.247e-05	70	cellular biosynthetic process	amigo.geneontol...
GO GO:0043234	View Gene Set	3.878e-07	2680	7.297e-05	71	protein complex	amigo.geneontol...
GO GO:0046907	View Gene Set	3.978e-07	753	7.381e-05	72	intracellular transport	amigo.geneontol...
GO GO:0034622	View Gene Set	4.219e-07	393	7.722e-05	73	cellular macromolecular complex assembly	amigo.geneontol...
GO GO:0016070	View Gene Set	4.594e-07	2596	8.294e-05	74	RNA metabolic process	amigo.geneontol...
GO GO:0022402	View Gene Set	4.799e-07	676	8.549e-05	75	cell cycle process	amigo.geneontol...
GO GO:0009058	View Gene Set	5.223e-07	4436	9.181e-05	76	biosynthetic process	amigo.geneontol...
GO GO:0022403	View Gene Set	7.078e-07	522	0.0001228	77	cell cycle phase	amigo.geneontol...
GO GO:0051188	View Gene Set	7.99e-07	112	0.0001369	78	cofactor biosynthetic process	amigo.geneontol...
GO GO:0065003	View Gene Set	8.562e-07	763	0.0001448	79	macromolecular complex assembly	amigo.geneontol...
GO GO:0034645	View Gene Set	8.701e-07	3529	0.0001453	80	cellular macromolecule biosynthetic process	amigo.geneontol...
GO GO:0019866	View Gene Set	9.517e-07	334	0.000157	81	organelle inner membrane	amigo.geneontol...
GO GO:0033554	View Gene Set	1.014e-06	698	0.0001652	82	cellular response to stress	amigo.geneontol...
GO GO:0000279	View Gene Set	1.104e-06	406	0.0001777	83	M phase	amigo.geneontol...
GO GO:0005681	View Gene Set	1.174e-06	135	0.0001868	84	spliceosomal complex	amigo.geneontol...
GO GO:0005743	View Gene Set	1.268e-06	305	0.0001993	85	mitochondrial inner membrane	amigo.geneontol...
GO GO:0016604	View Gene Set	1.375e-06	198	0.0002135	86	nuclear body	amigo.geneontol...
GO GO:0016071	View Gene Set	1.973e-06	381	0.0003029	87	mRNA metabolic process	amigo.geneontol...
GO GO:0048285	View Gene Set	2.311e-06	286	0.0003509	88	organelle fission	amigo.geneontol...
GO GO:0006364	View Gene Set	2.427e-06	97	0.0003643	89	rRNA processing	amigo.geneontol...
GO GO:0000280	View Gene Set	2.997e-06	276	0.00044	90	nuclear division	amigo.geneontol...
GO GO:0007067	View Gene Set	2.997e-06	276	0.00044	90	mitosis	amigo.geneontol...
GO GO:0000087	View Gene Set	3.135e-06	286	0.0004503	92	M phase of mitotic cell cycle	amigo.geneontol...
GO GO:0008033	View Gene Set	3.116e-06	78	0.0004503	92	tRNA processing	amigo.geneontol...
GO GO:0012501	View Gene Set	3.591e-06	1141	0.0005104	94	programmed cell death	amigo.geneontol...
GO GO:0006974	View Gene Set	3.668e-06	412	0.0005159	95	response to DNA damage stimulus	amigo.geneontol...
GO GO:0051186	View Gene Set	4.179e-06	215	0.0005756	96	cofactor metabolic process	amigo.geneontol...
GO GO:0005840	View Gene Set	4.156e-06	198	0.0005756	96	ribosome	amigo.geneontol...
GO GO:0006397	View Gene Set	4.364e-06	317	0.0005889	98	mRNA processing	amigo.geneontol...
GO GO:0009059	View Gene Set	4.349e-06	3597	0.0005889	98	macromolecule biosynthetic process	amigo.geneontol...
GO GO:0006915	View Gene Set	4.586e-06	1133	0.0006127	100	apoptosis	amigo.geneontol...
GO GO:0005793	View Gene Set	5.102e-06	52	0.0006749	101	ER-Golgi intermediate compartment	amigo.geneontol...
GO GO:0019538	View Gene Set	5.522e-06	2935	0.0007233	102	protein metabolic process	amigo.geneontol...
GO GO:0016072	View Gene Set	5.595e-06	101	0.0007257	103	rRNA metabolic process	amigo.geneontol...
GO GO:0022618	View Gene Set	5.86e-06	76	0.0007527	104	ribonucleoprotein complex assembly	amigo.geneontol...
GO GO:0022607	View Gene Set	7.085e-06	1043	0.0009014	105	cellular component assembly	amigo.geneontol...
GO GO:0016628	View Gene Set	8.958e-06	21	0.001129	106	oxidoreductase activity acting on the CH-CH group of donors NAD or NADP as acceptor	amigo.geneontol...
GO GO:0044451	View Gene Set	9.347e-06	600	0.001167	107	nucleoplasm part	amigo.geneontol...
GO GO:0051726	View Gene Set	1.276e-05	451	0.001579	108	regulation of cell cycle	amigo.geneontol...
GO GO:0015031	View Gene Set	1.323e-05	888	0.001622	109	protein transport	amigo.geneontol...
GO GO:0051100	View Gene Set	1.637e-05	84	0.001988	110	negative regulation of binding	amigo.geneontol...
GO GO:0010608	View Gene Set	1.854e-05	247	0.002232	111	posttranscriptional regulation of gene expression	amigo.geneontol...
GO GO:0045184	View Gene Set	1.984e-05	904	0.002367	112	establishment of protein localization	amigo.geneontol...
GO GO:0000775	View Gene Set	2.143e-05	146	0.002534	113	chromosome centromeric region	amigo.geneontol...
GO GO:0009108	View Gene Set	2.565e-05	77	0.003006	114	coenzyme biosynthetic process	amigo.geneontol...
GO GO:0016853	View Gene Set	2.665e-05	132	0.003096	115	isomerase activity	amigo.geneontol...
GO GO:0033036	View Gene Set	2.708e-05	1256	0.003119	116	macromolecule localization	amigo.geneontol...
GO GO:0016874	View Gene Set	2.974e-05	436	0.003396	117	ligase activity	amigo.geneontol...
GO GO:0022900	View Gene Set	3.454e-05	115	0.00391	118	electron transport chain	amigo.geneontol...
GO GO:0018130	View Gene Set	3.781e-05	63	0.004245	119	heterocycle biosynthetic process	amigo.geneontol...
GO GO:0006259	View Gene Set	3.908e-05	592	0.00435	120	DNA metabolic process	amigo.geneontol...
GO GO:0000313	View Gene Set	4.144e-05	49	0.004538	121	organellar ribosome	amigo.geneontol...
GO GO:0005761	View Gene Set	4.144e-05	49	0.004538	121	mitochondrial ribosome	amigo.geneontol...
GO GO:0000375	View Gene Set	4.496e-05	106	0.004868	123	RNA splicing via transesterification reactions	amigo.geneontol...
GO GO:0008104	View Gene Set	4.555e-05	1048	0.004868	123	protein localization	amigo.geneontol...
GO GO:0010941	View Gene Set	4.545e-05	904	0.004868	123	regulation of cell death	amigo.geneontol...
GO GO:0043067	View Gene Set	5.729e-05	897	0.006075	126	regulation of programmed cell death	amigo.geneontol...
GO GO:0006732	View Gene Set	6.637e-05	164	0.006981	127	coenzyme metabolic process	amigo.geneontol...
GO GO:0010008	View Gene Set	7.066e-05	210	0.007318	128	endosome membrane	amigo.geneontol...
GO GO:0044440	View Gene Set	7.066e-05	210	0.007318	128	endosomal part	amigo.geneontol...
GO GO:0006417	View Gene Set	7.335e-05	151	0.007539	130	regulation of translation	amigo.geneontol...
GO GO:0009163	View Gene Set	8.242e-05	9	0.008218	131	nucleoside biosynthetic process	amigo.geneontol...
GO GO:0042451	View Gene Set	8.242e-05	9	0.008218	131	purine nucleoside biosynthetic process	amigo.geneontol...
GO GO:0042455	View Gene Set	8.242e-05	9	0.008218	131	ribonucleoside biosynthetic process	amigo.geneontol...
GO GO:0046129	View Gene Set	8.242e-05	9	0.008218	131	purine ribonucleoside biosynthetic process	amigo.geneontol...
GO GO:0030532	View Gene Set	8.923e-05	32	0.00883	135	small nuclear ribonucleoprotein complex	amigo.geneontol...
GO GO:0005773	View Gene Set	0.0001119	286	0.01099	136	vacuole	amigo.geneontol...
GO GO:0008219	View Gene Set	0.0001138	1250	0.0111	137	cell death	amigo.geneontol...
GO GO:0016779	View Gene Set	0.0001148	120	0.01111	138	nucleotidyltransferase activity	amigo.geneontol...
GO GO:0006457	View Gene Set	0.0001189	172	0.01143	139	protein folding	amigo.geneontol...
GO GO:0042981	View Gene Set	0.0001237	889	0.01181	140	regulation of apoptosis	amigo.geneontol...
GO GO:0016265	View Gene Set	0.0001257	1253	0.01191	141	death	amigo.geneontol...
GO GO:0051301	View Gene Set	0.0001298	358	0.01222	142	cell division	amigo.geneontol...
GO GO:0006281	View Gene Set	0.000135	309	0.01255	143	DNA repair	amigo.geneontol...
GO GO:0043069	View Gene Set	0.0001353	409	0.01255	143	negative regulation of programmed cell death	amigo.geneontol...
GO GO:0060548	View Gene Set	0.0001412	415	0.01301	145	negative regulation of cell death	amigo.geneontol...
GO GO:0009057	View Gene Set	0.0001461	570	0.01337	146	macromolecule catabolic process	amigo.geneontol...
GO GO:0006446	View Gene Set	0.0001661	45	0.0151	147	regulation of translational initiation	amigo.geneontol...
GO GO:0000323	View Gene Set	0.0001888	239	0.01682	148	lytic vacuole	amigo.geneontol...
GO GO:0005764	View Gene Set	0.0001888	239	0.01682	148	lysosome	amigo.geneontol...
GO GO:0005765	View Gene Set	0.0001888	96	0.01682	148	lysosomal membrane	amigo.geneontol...
GO GO:0016363	View Gene Set	0.0001906	64	0.01686	151	nuclear matrix	amigo.geneontol...
GO GO:0048523	View Gene Set	0.0001955	1895	0.01719	152	negative regulation of cellular process	amigo.geneontol...
GO GO:0016627	View Gene Set	0.0002066	53	0.01804	153	oxidoreductase activity acting on the CH-CH group of donors	amigo.geneontol...
GO GO:0005819	View Gene Set	0.0002123	167	0.01842	154	spindle	amigo.geneontol...
GO GO:0044452	View Gene Set	0.0002213	28	0.01907	155	nucleolar part	amigo.geneontol...
GO GO:0044427	View Gene Set	0.000229	420	0.01961	156	chromosomal part	amigo.geneontol...
GO GO:0000377	View Gene Set	0.0002498	97	0.02108	157	RNA splicing via transesterification reactions with bulged adenosine as nucleophile	amigo.geneontol...
GO GO:0000398	View Gene Set	0.0002498	97	0.02108	157	nuclear mRNA splicing via spliceosome	amigo.geneontol...
GO GO:0010498	View Gene Set	0.0002556	166	0.02108	157	proteasomal protein catabolic process	amigo.geneontol...
GO GO:0004812	View Gene Set	0.0002542	46	0.02108	157	aminoacyl-tRNA ligase activity	amigo.geneontol...
GO GO:0016875	View Gene Set	0.0002542	46	0.02108	157	ligase activity forming carbon-oxygen bonds	amigo.geneontol...
GO GO:0016876	View Gene Set	0.0002542	46	0.02108	157	ligase activity forming aminoacyl-tRNA and related compounds	amigo.geneontol...
GO GO:0043066	View Gene Set	0.0002643	404	0.02163	163	negative regulation of apoptosis	amigo.geneontol...
GO GO:0031902	View Gene Set	0.0002656	64	0.02163	163	late endosome membrane	amigo.geneontol...
GO GO:0006413	View Gene Set	0.0002712	62	0.02196	165	translational initiation	amigo.geneontol...
GO GO:0006461	View Gene Set	0.0002869	595	0.02296	166	protein complex assembly	amigo.geneontol...
GO GO:0070271	View Gene Set	0.0002869	595	0.02296	166	protein complex biogenesis	amigo.geneontol...
GO GO:0000166	View Gene Set	0.0002903	2257	0.02309	168	nucleotide binding	amigo.geneontol...
GO GO:0009394	View Gene Set	0.0002963	21	0.02343	169	2'-deoxyribonucleotide metabolic process	amigo.geneontol...
GO GO:0043392	View Gene Set	0.0003194	69	0.02503	170	negative regulation of DNA binding	amigo.geneontol...
GO GO:0044265	View Gene Set	0.0003204	479	0.02503	170	cellular macromolecule catabolic process	amigo.geneontol...
GO GO:0032268	View Gene Set	0.0003716	576	0.02887	172	regulation of cellular protein metabolic process	amigo.geneontol...
GO GO:0042026	View Gene Set	0.0003773	11	0.02914	173	protein refolding	amigo.geneontol...
GO GO:0008553	View Gene Set	0.0003882	8	0.02981	174	hydrogen-exporting ATPase activity phosphorylative mechanism	amigo.geneontol...
GO GO:0006886	View Gene Set	0.0003943	439	0.0301	175	intracellular protein transport	amigo.geneontol...
GO GO:0003899	View Gene Set	0.0004172	42	0.03149	176	DNA-directed RNA polymerase activity	amigo.geneontol...
GO GO:0034062	View Gene Set	0.0004172	42	0.03149	176	RNA polymerase activity	amigo.geneontol...
GO GO:0030134	View Gene Set	0.0004372	16	0.03282	178	ER to Golgi transport vesicle	amigo.geneontol...
GO GO:0008637	View Gene Set	0.0004508	34	0.03365	179	apoptotic mitochondrial changes	amigo.geneontol...
GO GO:0034399	View Gene Set	0.0004847	71	0.03597	180	nuclear periphery	amigo.geneontol...
GO GO:0051246	View Gene Set	0.0004987	652	0.03681	181	regulation of protein metabolic process	amigo.geneontol...
GO GO:0003735	View Gene Set	0.0005028	158	0.03691	182	structural constituent of ribosome	amigo.geneontol...
GO GO:0030163	View Gene Set	0.0005113	398	0.03733	183	protein catabolic process	amigo.geneontol...
GO GO:0042770	View Gene Set	0.0005269	103	0.03809	184	DNA damage response signal transduction	amigo.geneontol...
GO GO:0043161	View Gene Set	0.0005274	162	0.03809	184	proteasomal ubiquitin-dependent protein catabolic process	amigo.geneontol...
GO GO:0030684	View Gene Set	0.0005327	14	0.03826	186	preribosome	amigo.geneontol...
GO GO:0032446	View Gene Set	0.0005437	310	0.03884	187	protein modification by small protein conjugation	amigo.geneontol...
GO GO:0006839	View Gene Set	0.0005686	75	0.0404	188	mitochondrial transport	amigo.geneontol...
GO GO:0010605	View Gene Set	0.0006502	827	0.04596	189	negative regulation of macromolecule metabolic process	amigo.geneontol...
GO GO:0003743	View Gene Set	0.0006704	52	0.04714	190	translation initiation factor activity	amigo.geneontol...
GO GO:0045333	View Gene Set	0.0006749	100	0.04721	191	cellular respiration	amigo.geneontol...
GO GO:0005774	View Gene Set	0.0006873	131	0.04783	192	vacuolar membrane	amigo.geneontol...

Gene Set Collection: Broad.c2.CGP

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Broad NUYTTEN_EZH2_TARGETS_UP	View Gene Set	7.872e-43	944	1.883e-39	1	Genes up-regulated in PC3 cells (prostate cancer) after knockdown of EZH2 [Gene ID=2146] by RNAi.	www.broad.mit.e...
Broad KRIGE_RESPONSE_TO_TOSEDOSTAT_24HR_DN	View Gene Set	9.763e-40	920	1.168e-36	2	Genes down-regulated in HL-60 cells (acute promyelocytic leukemia APL) after treatment with the aminopeptidase inhibitor tosedostat (CHR-2797) [PubChem=15547703] for 24 h.	www.broad.mit.e...
Broad KRIGE_RESPONSE_TO_TOSEDOSTAT_6HR_DN	View Gene Set	2.354e-36	832	1.877e-33	3	Genes down-regulated in HL-60 cells (acute promyelocytic leukemia APL) after treatment with the aminopeptidase inhibitor tosedostat (CHR-2797) [PubChem=15547703] for 6 h.	www.broad.mit.e...
Broad DIAZ_CHRONIC_MEYLOGENOUS_LEUKEMIA_UP	View Gene Set	2.462e-31	1353	1.472e-28	4	Genes up-regulated in CD34+ [Gene ID=947] cells isolated from bone marrow of CML (chronic myelogenous leukemia) patients compared to those from normal donors.	www.broad.mit.e...
Broad CAIRO_HEPATOBLASTOMA_CLASSES_UP	View Gene Set	2.405e-30	577	1.151e-27	5	Genes up-regulated in robust Cluster 2 (rC2) of hepatoblastoma samples compared to those in the robust Cluster 1 (rC1).	www.broad.mit.e...
Broad TIEN_INTESTINE_PROBIOTICS_24HR_UP	View Gene Set	1.825e-29	537	7.274e-27	6	Genes up-regulated in Caco-2 cells (intestinal epithelium) after coculture with the probiotic bacteria L. casei for 24h.	www.broad.mit.e...
Broad NUYTTEN_NIPP1_TARGETS_UP	View Gene Set	2.76e-29	657	9.43e-27	7	Genes up-regulated in PC3 cells (prostate cancer) after knockdown of NIPP1 [Gene ID=5511] by RNAi.	www.broad.mit.e...
Broad DODD_NASOPHARYNGEAL_CARCINOMA_DN	View Gene Set	4.242e-28	1253	1.268e-25	8	Genes down-regulated in nasopharyngeal carcinoma (NPC) compared to the normal tissue.	www.broad.mit.e...
Broad NUYTTEN_EZH2_TARGETS_DN	View Gene Set	2.096e-27	859	5.57e-25	9	Genes down-regulated in PC3 cells (prostate cancer) after knockdown of EZH2 [Gene ID=2146] by RNAi.	www.broad.mit.e...
Broad CHARAFE_BREAST_CANCER_LUMINAL_VS_BASAL_DN	View Gene Set	3.402e-27	437	8.138e-25	10	Genes down-regulated in luminal-like breast cancer cell lines compared to the basal-like ones.	www.broad.mit.e...
Broad MANALO_HYPOXIA_DN	View Gene Set	4.203e-26	276	9.141e-24	11	Genes down-regulated in response to both hypoxia and overexpression of an active form of HIF1A [Gene ID=3091].	www.broad.mit.e...
Broad WEI_MYCN_TARGETS_WITH_E_BOX	View Gene Set	1.027e-24	757	2.047e-22	12	Genes whose promoters contain E-box motifs and whose expression changed in MYCN-3 cells (neuroblastoma) upon induction of MYCN [Gene ID=4613].	www.broad.mit.e...
Broad NUYTTEN_NIPP1_TARGETS_DN	View Gene Set	2.535e-24	758	4.664e-22	13	Genes down-regulated in PC3 cells (prostate cancer) after knockdown of NIPP1 [Gene ID=5511] by RNAi.	www.broad.mit.e...
Broad BUYTAERT_PHOTODYNAMIC_THERAPY_STRESS_DN	View Gene Set	1.224e-23	599	2.092e-21	14	Genes down-regulated in T24 (bladder cancer) cells in response to the photodynamic therapy (PDT) stress.	www.broad.mit.e...
Broad KINSEY_TARGETS_OF_EWSR1_FLII_FUSION_UP	View Gene Set	8.324e-22	1180	1.327e-19	15	Genes up-regulated in TC71 and EWS502 cells (Ewing's sarcoma) upon knockdown of the EWSR1-FLII fusion [Gene ID=2130 2314].	www.broad.mit.e...
Broad CASORELLI_ACUTE_PROMYELOCYTIC_LEUKEMIA_DN	View Gene Set	5.414e-21	639	8.094e-19	16	Genes down-regulated in APL (acute promyeolocytic leukemia) blasts expressing PML-RARA fusion [Gene ID=5371 5914] compared to normal promyeloblasts.	www.broad.mit.e...
Broad REN_ALVEOLAR_RHABDOMYOSARCOMA_DN	View Gene Set	1.549e-20	402	2.179e-18	17	Genes commonly down-regulated in human alveolar rhabdomyosarcoma (ARMS) and its mouse model overexpressing PAX3-FOXO1 [Gene ID=5077 2308] fusion.	www.broad.mit.e...
Broad BERENJENO_TRANSFORMED_BY_RHOA_UP	View Gene Set	1.983e-20	485	2.636e-18	18	Genes up-regulated in NIH3T3 cells (fibroblasts) transformed by expression of contitutively active (Q63L) form of RHOA [Gene ID=387] off plasmid vector.	www.broad.mit.e...
Broad PUJANA_BRCA1_PCC_NETWORK	View Gene Set	2.154e-20	1582	2.712e-18	19	Genes constituting the BRCA1-PCC network of transcripts whose expression positively correlated (Pearson correlation coefficient PCC >= 0.4) with that of BRCA1 [Gene ID=672] across a compendium of normal tissues.	www.broad.mit.e...
Broad PUJANA_CHEK2_PCC_NETWORK	View Gene Set	4.747e-20	744	5.678e-18	20	Genes constituting the CHEK2-PCC network of transcripts whose expression positively correlates (Pearson correlation coefficient PCC >= 0.4) with that of CHEK2 [Gene ID=11200].	www.broad.mit.e...
Broad RODRIGUES_THYROID_CARCINOMA_ANAPLASTIC_UP	View Gene Set	7.158e-20	681	8.153e-18	21	Genes up-regulated in anaplastic thyroid carcinoma (ATC) compared to normal thyroid tissue.	www.broad.mit.e...
Broad GARY_CD5_TARGETS_DN	View Gene Set	1.146e-19	415	1.246e-17	22	Genes down-regulated in Daudi cells (B lymphocytes) stably expressing CD5 [Gene ID=921] off a plasmid vector.	www.broad.mit.e...
Broad KRIGE_RESPONSE_TO_TOSEDOSTAT_6HR_UP	View Gene Set	5.051e-19	869	5.253e-17	23	Genes up-regulated in HL-60 cells (acute promyelocytic leukemia APL) after treatment with the aminopeptidase inhibitor tosedostat (CHR-2797) [PubChem=15547703] for 6 h.	www.broad.mit.e...
Broad WANG_SMARCE1_TARGETS_DN	View Gene Set	1.325e-18	329	1.32e-16	24	Genes down-regulated in BT549 cells (breast cancer) by expression of SMARCE1 [Gene ID=6605] off a retroviral vector.	www.broad.mit.e...
Broad FLECHNER_BIOPSY_KIDNEY_TRANSPLANT_OK_VS_DONOR_UP	View Gene Set	3.665e-18	532	3.507e-16	25	Genes diffierentially expressed in kidney biopsies from patients with well functioning kidneys more than 1-year post transplant compared to the biopsies from normal living kidney donors.	www.broad.mit.e...
Broad BILD_MYC_ONCOGENIC_SIGNATURE	View Gene Set	8.632e-18	187	7.941e-16	26	Genes selected in supervised analyses to discriminate cells expressing c-Myc [Gene ID=4609] from control cells expressing GFP.	www.broad.mit.e...
Broad MOOTHA_MITOCHONDRIA	View Gene Set	1.055e-17	433	9.344e-16	27	Mitochondrial genes	www.broad.mit.e...
Broad MOOTHA_HUMAN_MITODB_6_2002	View Gene Set	3.119e-17	420	2.664e-15	28	Mitochondrial genes; based on literature and sequence annotation resources and converted to Affymetrix HG-U133A probe sets.	www.broad.mit.e...
Broad RODRIGUES_THYROID_CARCINOMA_POORLY_DIFFERENTIATED_UP	View Gene Set	3.496e-17	589	2.884e-15	29	Genes up-regulated in poorly differentiated thyroid carcinoma (PDTC) compared to normal thyroid tissue.	www.broad.mit.e...
Broad HSIAO_HOUSEKEEPING_GENES	View Gene Set	3.905e-17	384	3.114e-15	30	Housekeeping genes identified as expressed across 19 normal tissues.	www.broad.mit.e...
Broad SENESE_HDAC1_TARGETS_UP	View Gene Set	4.078e-17	427	3.146e-15	31	Genes up-regulated in U2OS cells (osteosarcoma) upon knockdown of HDAC1 [Gene ID=3065] by RNAi.	www.broad.mit.e...
Broad FOURNIER_ACINAR_DEVELOPMENT_LATE_2	View Gene Set	7.162e-17	265	5.354e-15	32	Genes identified by method 2 as coordinately down-regulated late in HMEC cells (mammary epithelium) during acinar development in vitro.	www.broad.mit.e...
Broad STEIN_ESRRA_TARGETS	View Gene Set	8.175e-17	508	5.926e-15	33	Genes regulated by ESRRA [Gene ID=2101] in MCF-7 cells (breast cancer).	www.broad.mit.e...
Broad ACEVEDO_LIVER_TUMOR_VS_NORMAL_ADJACENT_TISSUE_UP	View Gene Set	3.349e-16	806	2.356e-14	34	Genes up-regulated in liver tumor compared to the normal adjacent tissue.	www.broad.mit.e...
Broad ACEVEDO_LIVER_CANCER_UP	View Gene Set	5.091e-16	915	3.479e-14	35	Genes up-regulated in hepatocellular carcinoma (HCC) compared to normal liver samples.	www.broad.mit.e...
Broad ENK_UV_RESPONSE_KERATINOCYTE_UP	View Gene Set	6.014e-16	517	3.996e-14	36	Genes up-regulated in NHEK cells (normal epidermal keratinocytes) after UVB irradiation.	www.broad.mit.e...
Broad WU_CELL_MIGRATION	View Gene Set	6.284e-16	182	4.062e-14	37	Genes associated with migration rate of 40 human bladder cancer cells.	www.broad.mit.e...
Broad BLALOCK_ALZHEIMERS_DISEASE_DN	View Gene Set	2.637e-15	1209	1.66e-13	38	Genes down-regulated in brain from patients with Alzheimer's disease.	www.broad.mit.e...
Broad ALONSO_METASTASIS_UP	View Gene Set	7.837e-15	152	4.807e-13	39	Up-regulated genes in melanoma tumous that developed metastatic disease compared to primary melanoma that did not.	www.broad.mit.e...
Broad ONKEN_UVEAL_MELANOMA_UP	View Gene Set	2.134e-14	739	1.276e-12	40	Genes up-regulated in uveal melanoma: class 2 vs class 1 tumors.	www.broad.mit.e...
Broad ENK_UV_RESPONSE_KERATINOCYTE_DN	View Gene Set	2.32e-14	475	1.353e-12	41	Genes down-regulated in NHEK cells (normal epidermal keratinocytes) after UVB irradiation.	www.broad.mit.e...
Broad SCHLOSSER_SERUM_RESPONSE_DN	View Gene Set	2.439e-14	666	1.389e-12	42	Cluster 4: genes down-regulated in B493-6 cells (B lymphocytes) upon serum stimulation but not affected by MYC [Gene ID=4609].	www.broad.mit.e...
Broad BENPORATH_NANOG_TARGETS	View Gene Set	3.262e-14	946	1.814e-12	43	Set 'Nanog targets': genes upregulated and identified by ChIP on chip as Nanog [Gene ID=79923] transcription factor targets in human embryonic stem cells.	www.broad.mit.e...
Broad RHEIN_ALL_GLUCOCORTICOID_THERAPY_DN	View Gene Set	3.842e-14	351	2.088e-12	44	Genes down-regulated in ALL (acute lymphoblastic leukemia) blasts after 1 week of treatment with glucocorticoids.	www.broad.mit.e...
Broad CHARAFE_BREAST_CANCER_LUMINAL_VS_MESENCHYMAL_DN	View Gene Set	4.773e-14	444	2.537e-12	45	Genes down-regulated in luminal-like breast cancer cell lines compared to the mesenchymal-like ones.	www.broad.mit.e...
Broad GRADE_COLON_CANCER_UP	View Gene Set	6.175e-14	711	3.211e-12	46	Up-regulated genes in colon carcinoma tumors compared to the matched normal mucosa samples.	www.broad.mit.e...
Broad MONNIER_POSTRADIATION_TUMOR_ESCAPE_UP	View Gene Set	6.592e-14	359	3.355e-12	47	The postradiation tumor escape signature: genes up-regulated in tumors from irradiated stroma vs those from non-irradiated stroma.	www.broad.mit.e...
Broad ONDER_CDH1_TARGETS_2_DN	View Gene Set	9.008e-14	453	4.489e-12	48	Genes down-regulated in HMLE cells (immortalized nontransformed mammary epithelium) after E-cadhedrin (CDH1) [Gene ID=999] knockdown by RNAi.	www.broad.mit.e...
Broad COLDREN_GEFITINIB_RESISTANCE_DN	View Gene Set	1.036e-13	217	5.059e-12	49	Genes down-regulated in NSCLC (non-small cell lung carcinoma) cell lines resistant to gefitinib [PubChem=123631] compared to the sensitive ones.	www.broad.mit.e...
Broad GRUETZMANN_PANCREATIC_CANCER_UP	View Gene Set	2.339e-13	345	1.119e-11	50	Genes up-regulated in pancreatic ductal adenocarcinoma (PDAC) identified in a meta analysis across four independent studies.	www.broad.mit.e...
Broad KOBAYASHI_EGFR_SIGNALING_24HR_DN	View Gene Set	3.89e-13	243	1.825e-11	51	Genes down-regulated in H1975 cells (non-small cell lung cancer NSCLC) resistant to gefitinib [PubChem=123631] after treatment with EGFR inhibitor CL-387785 [PubChem=2776] for 24h.	www.broad.mit.e...
Broad BILD_HRAS_ONCOGENIC_SIGNATURE	View Gene Set	4.262e-13	248	1.96e-11	52	Genes selected in supervised analyses to discriminate cells expressing activated HRAS [Gene ID=3265] oncogene from control cells expressing GFP.	www.broad.mit.e...
Broad VECCHI_GASTRIC_CANCER_EARLY_UP	View Gene Set	4.473e-13	408	1.982e-11	53	Up-regulated genes distinguishing between early gastric cancer (EGC) and normal tissue samples.	www.broad.mit.e...
Broad STEIN_ESRRA_TARGETS_UP	View Gene Set	4.391e-13	368	1.982e-11	53	Genes up-regulated by ESRRA [Gene ID=2101] only.	www.broad.mit.e...
Broad BUYTAERT_PHOTODYNAMIC_THERAPY_STRESS_UP	View Gene Set	6.58e-13	783	2.862e-11	55	Genes up-regulated in T24 (bladder cancer) cells in response to the photodynamic therapy (PDT) stress.	www.broad.mit.e...
Broad WONG_EMBRYONIC_STEM_CELL_CORE	View Gene Set	7.529e-13	331	3.216e-11	56	The 'core ESC-like gene module': genes coordinately up-regulated in a compendium of mouse embryonic stem cells (ESC) which are shared with the human ESC-like module.	www.broad.mit.e...
Broad LANDIS_ERBB2_BREAST_TUMORS_324_UP	View Gene Set	8.017e-13	132	3.364e-11	57	The 324 genes identified by two analytical methods as changed in the mammary tumors induced by transgenic expression of ERBB2 [Gene ID=2064].	www.broad.mit.e...
Broad BLUM_RESPONSE_TO_SALIRASIB_UP	View Gene Set	8.7e-13	240	3.588e-11	58	Selected genes up-regulated in response to the Ras inhibitor salirasib [PubChem=5469318] in a panel of cancer cell lines with constantly active HRAS [Gene ID=3265].	www.broad.mit.e...
Broad DACOSTA_UV_RESPONSE_VIA_ERCC3_DN	View Gene Set	1.532e-12	825	6.209e-11	59	Genes down-regulated in fibroblasts expressing mutant forms of ERCC3 [Gene ID=2071] after UV irradiation.	www.broad.mit.e...
Broad BORCZUK_MALIGNANT_MESOTHELIOMA_UP	View Gene Set	1.613e-12	290	6.43e-11	60	Genes up-regulated in biphasic (mixed) vs epithelial subtypes of malignant peritoneal mesothelioma.	www.broad.mit.e...
Broad HORIUCHI_WTAP_TARGETS_DN	View Gene Set	1.853e-12	289	7.265e-11	61	Genes down-regulated in primary endothelial cells (HUVEC) after knockdown of WTAP [Gene ID=9589] by RNAi.	www.broad.mit.e...
Broad NAKAMURA_TUMOR_ZONE_PERIPHERAL_VS_CENTRAL_UP	View Gene Set	2.502e-12	263	9.655e-11	62	Up-regulated genes in peripheral zone of human pancreatic cancer growing in the pancreas of nude mice compared to that of the tumor from the central zone.	www.broad.mit.e...
Broad DANG_BOUND_BY_MYC	View Gene Set	3.565e-12	1045	1.354e-10	63	Genes whose promoters are bound by MYC [Gene ID=4609] according to MYC Target Gene Database.	www.broad.mit.e...
Broad MUELLER_PLURINET	View Gene Set	4.276e-12	294	1.598e-10	64	Genes constituting the PluriNet protein-protein network shared by the pluripotent cells (embryonic stem cells embryonical carcinomas and induced pluripotent cells).	www.broad.mit.e...
Broad RAMALHO_STEMNESS_UP	View Gene Set	4.833e-12	192	1.779e-10	65	Genes enriched in embryonic neural and hematopoietic stem cells.	www.broad.mit.e...
Broad SHEDDEN_LUNG_CANCER_POOR_SURVIVAL_A6	View Gene Set	5.852e-12	435	2.121e-10	66	Cluster 6 of method A: up-regulation of these genes in patients with non???small cell lung cancer (NSCLC) predicts poor survival outcome.	www.broad.mit.e...
Broad YAO_TEMPORAL_RESPONSE_TO_PROGESTERONE_CLUSTER_17	View Gene Set	6.36e-12	165	2.271e-10	67	Genes co-regulated in uterus during a time course response to progesterone [PubChem=5994]: SOM cluster 17.	www.broad.mit.e...
Broad LAIHO_COLORECTAL_CANCER_SERRATED_UP	View Gene Set	9.535e-12	108	3.354e-10	68	Genes up-regulated in serrated vs conventional colorectal carcinoma (CRC) samples.	www.broad.mit.e...
Broad SENESE_HDAC3_TARGETS_UP	View Gene Set	1.939e-11	471	6.723e-10	69	Genes up-regulated in U2OS cells (osteosarcoma) upon knockdown of HDAC3 [Gene ID=8841] by RNAi.	www.broad.mit.e...
Broad CREIGHTON_ENDOCRINE_THERAPY_RESISTANCE_1	View Gene Set	3.457e-11	491	1.181e-09	70	The 'group 1 set' of genes associated with acquired endocrine therapy resistance in breast tumors expressing ESR1 and ERBB2 [Gene ID=2099 2064].	www.broad.mit.e...
Broad WONG_MITOCHONDRIA_GENE_MODULE	View Gene Set	4.019e-11	208	1.354e-09	71	Genes that comprise the mitochondria gene module	www.broad.mit.e...
Broad VANTVEER_BREAST_CANCER_ESR1_DN	View Gene Set	5.979e-11	217	1.986e-09	72	Down-regulated genes from the optimal set of 550 markers discriminating breast cancer samples by ESR1 [Gene ID=2099] expression: ER(+) vs ER(-) tumors.	www.broad.mit.e...
Broad GEORGES_TARGETS_OF_MIR192_AND_MIR215	View Gene Set	6.386e-11	809	2.093e-09	73	Genes down-regulated in HCT116 cells (colon cancer) by expression of MIR192 or MIR215 [Gene ID=406967 406997] at 24 h.	www.broad.mit.e...
Broad MILI_PSEUDOPODIA_HAPTOTAXIS_UP	View Gene Set	7.39e-11	452	2.389e-09	74	Transcripts enriched in pseudopodia of NIH/3T3 cells (fibroblast) in response to haptotactic migratory stimulus by fibronectin FN1 [Gene ID=2335].	www.broad.mit.e...
Broad PROVENZANI_METASTASIS_DN	View Gene Set	8.02e-11	135	2.558e-09	75	Genes down-regulated in polysomal and total RNA samples from SW480 cells (primary colorectal carcinoma CRC) compared to the SW620 cells (lymph node metastasis from the same individual).	www.broad.mit.e...
Broad KRIGE_RESPONSE_TO_TOSEDOSTAT_24HR_UP	View Gene Set	9.892e-11	716	3.114e-09	76	Genes up-regulated in HL-60 cells (acute promyelocytic leukemia APL) after treatment with the aminopeptidase inhibitor tosedostat (CHR-2797) [PubChem=15547703] for 24 h.	www.broad.mit.e...
Broad WANG_CLIM2_TARGETS_DN	View Gene Set	1.136e-10	166	3.529e-09	77	Genes down-regulated in MCF7 cells (breast cancer) engineered to conditionally express a dominant negative form of CLIM2 [Gene ID=8861] by a Tet Off system.	www.broad.mit.e...
Broad HELLER_HDAC_TARGETS_SILENCED_BY_METHYLATION_UP	View Gene Set	1.327e-10	399	4.068e-09	78	Genes up-regulated in multiple myeloma (MM) cell lines treated with both decitabine [PubChem=451668] TSA [PubChem=5562].	www.broad.mit.e...
Broad MISSIAGLIA_REGULATED_BY_METHYLATION_UP	View Gene Set	1.503e-10	99	4.551e-09	79	Genes up-regulated in PaCa44 and CFPAC1 cells (pancreatic cancer) after treatment with decitabine [PubChem=451668] a DNA hypomethylating agent similar to azacitidine [PubChem=9444].	www.broad.mit.e...
Broad ZHANG_RESPONSE_TO_IKK_INHIBITOR_AND_TNF_UP	View Gene Set	1.619e-10	208	4.841e-09	80	Genes up-regulated in BxPC3 cells (pancreatic cancer) after treatment with TNF [Gene ID=7124] or IKI-1 an inhibitor of I?B kinase (IKK).	www.broad.mit.e...
Broad BERENJENO_TRANSFORMED_BY_RHOA_DN	View Gene Set	2.125e-10	353	6.276e-09	81	Genes down-regulated in NIH3T3 cells (fibroblasts) transformed by expression of contitutively active (Q63L) form of RHOA [Gene ID=387] off plasmid vector.	www.broad.mit.e...
Broad LOPEZ_MBD_TARGETS	View Gene Set	2.573e-10	855	7.505e-09	82	Genes up-regulated in HeLa cells (cervical cancer) after simultaneus knockdown of all three MBD (methyl-CpG binding domain) proteins MeCP2 MBD1 and MBD2 [Gene ID=4204 4152 8932] by RNAi.	www.broad.mit.e...
Broad TONKS_TARGETS_OF_RUNX1_RUNX1T1_FUSION_MONOCYTE_UP	View Gene Set	3.057e-10	195	8.809e-09	83	Genes up-regulated in monocytes by RUNX1-RUNX1T1 [Gene ID=861 862] fusion.	www.broad.mit.e...
Broad FULCHER_INFLAMMATORY_RESPONSE_LECTIN_VS_LPS_UP	View Gene Set	3.29e-10	539	9.368e-09	84	Genes up-regulated in monocyte-derived dendritic cells (MDDC) after stimulation with galecin-1 (lectin LGALS1) [Gene ID=3956] compared to that with bacterial lipopolysaccharide (LPS).	www.broad.mit.e...
Broad ONDER_CDH1_TARGETS_1_DN	View Gene Set	3.997e-10	161	1.125e-08	85	Genes down-regulated in HMLE cells (mmortalized nontransformed mammary epithelial) by expression of a dominant-negative form of E-cadhedrin (CDH1) [Gene ID=999].	www.broad.mit.e...
Broad DACOSTA_UV_RESPONSE_VIA_ERCC3_COMMON_DN	View Gene Set	4.81e-10	418	1.338e-08	86	Common down-regulated transcripts in fibroblasts expressing either XP/CS or TDD mutant forms of ERCC3 [Gene ID=2071] after UVC irradiation.	www.broad.mit.e...
Broad BASAKI_YBX1_TARGETS_UP	View Gene Set	4.962e-10	279	1.364e-08	87	Genes up-regulated in SKOC-3 cells (ovarian cancer) after YB-1 (YBX1) [Gene ID=4904] knockdown by RNAi.	www.broad.mit.e...
Broad SPIELMAN_LYMPHOBLAST_EUROPEAN_VS_ASIAN_DN	View Gene Set	7.742e-10	571	2.105e-08	88	Genes down-regulated in lymphoblastoid cells from the European population compared to those from the Asian population.	www.broad.mit.e...
Broad TIEN_INTESTINE_PROBIOTICS_6HR_DN	View Gene Set	8.626e-10	160	2.318e-08	89	Genes down-regulated in Caco-2 cells (intestinal epithelium) after coculture with the probiotic bacteria L. casei for 6h.	www.broad.mit.e...
Broad ZHANG_BREAST_CANCER_PROGENITORS_UP	View Gene Set	8.842e-10	370	2.35e-08	90	Genes changed in cancer stem cells isolated from mammary tumors compared to the non-tumorigenic cells.	www.broad.mit.e...
Broad LEE_LIVER_CANCER_SURVIVAL_DN	View Gene Set	9.207e-10	123	2.42e-08	91	Genes highly expressed in hepatocellular carcinoma with poor survival.	www.broad.mit.e...
Broad LINDGREN_BLADDER_CANCER_CLUSTER_3_UP	View Gene Set	1.015e-09	314	2.625e-08	92	Genes whose expression profile is specific to Cluster III of urothelial cell carcinoma (UCC) tumors.	www.broad.mit.e...
Broad SHEN_SMARCA2_TARGETS_UP	View Gene Set	1.021e-09	406	2.625e-08	92	Genes whose expression positively correlated with that of SMARCA2 [Gene ID=6595] in prostate cancer samples.	www.broad.mit.e...
Broad SCHUHMACHER_MYC_TARGETS_UP	View Gene Set	1.034e-09	68	2.632e-08	94	Genes up-regulated in P493-6 cells (Burkitt's lymphoma) induced to express MYC [Gene ID=4609].	www.broad.mit.e...
Broad WELCSH_BRCA1_TARGETS_1_DN	View Gene Set	1.125e-09	124	2.832e-08	95	Upregulated by induction of exogenous BRCA1 in EcR-293 cells	www.broad.mit.e...
Broad SPIELMAN_LYMPHOBLAST_EUROPEAN_VS_ASIAN_UP	View Gene Set	1.322e-09	469	3.294e-08	96	Genes up-regulated in lymphoblastoid cells from the European population compared to those from the Asian population.	www.broad.mit.e...
Broad WELCSH_BRCA1_TARGETS_1_UP	View Gene Set	1.581e-09	171	3.9e-08	97	Upregulated by induction of exogenous BRCA1 in EcR-293 cells	www.broad.mit.e...
Broad ENK_UV_RESPONSE_EPIDERMIS_UP	View Gene Set	1.605e-09	283	3.918e-08	98	Genes up-regulated in epidermis after to UVB irradiation.	www.broad.mit.e...
Broad HUPER_BREAST_BASAL_VS_LUMINAL_DN	View Gene Set	1.807e-09	59	4.323e-08	99	Genes down-regulated in basal mammary epithelial cells compared to the luminal ones.	www.broad.mit.e...
Broad BOYAULT_LIVER_CANCER_SUBCLASS_G3_UP	View Gene Set	1.806e-09	184	4.323e-08	99	Up-regulated genes in hepatocellular carcinoma (HCC) subclass G3 defined by unsupervised clustering.	www.broad.mit.e...
Broad BENPORATH_SOX2_TARGETS	View Gene Set	2.612e-09	704	6.186e-08	101	Set 'Sox2 targets': genes upregulated and identified by ChIP on chip as SOX2 [Gene ID=6657] transcription factor targets in human embryonic stem cells.	www.broad.mit.e...
Broad HELLER_HDAC_TARGETS_UP	View Gene Set	2.788e-09	268	6.538e-08	102	Genes up-regulated in at least one of three multiple myeloma (MM) cell lines by TSA [PubChem=5562].	www.broad.mit.e...
Broad DEBIASI_APOPTOSIS_BY_REOVIRUS_INFECTION_UP	View Gene Set	2.838e-09	242	6.592e-08	103	Genes up-regulated in HEK293 cells (embryonic kidney) at 6 h 12 h or 24 h after infection with reovirus strain T3A (known as a strong inducer of apoptosis).	www.broad.mit.e...
Broad CREIGHTON_ENDOCRINE_THERAPY_RESISTANCE_5	View Gene Set	3.072e-09	446	7.066e-08	104	The 'group 5 set' of genes associated with acquired endocrine therapy resistance in breast tumors expressing ESR1 but not ERBB2 [Gene ID=2099 2064].	www.broad.mit.e...
Broad HUANG_DASATINIB_RESISTANCE_UP	View Gene Set	3.3e-09	75	7.506e-08	105	Genes whose expression positively correlated with sensitivity of breast cancer cell lines to dasatinib [PubChem=3062316].	www.broad.mit.e...
Broad SESTO_RESPONSE_TO_UV_C7	View Gene Set	3.326e-09	69	7.506e-08	105	Cluster 7: genes changed in primary keratinocytes by UVB irradiation.	www.broad.mit.e...
Broad BENPORATH_CYCLING_GENES	View Gene Set	3.372e-09	630	7.539e-08	107	Genes showing cell-cycle stage-specific expression [PMID=12058064].	www.broad.mit.e...
Broad STARK_PREFRONTAL_CORTEX_22Q11_DELETION_DN	View Gene Set	3.416e-09	437	7.566e-08	108	Genes down-regulated in prefrontal cortex (PFC) of mice carrying a hemizygotic microdeletion in the 22q11.2 region.	www.broad.mit.e...
Broad KIM_WT1_TARGETS_DN	View Gene Set	4.743e-09	431	1.041e-07	109	Genes down-regulated in UB27 cells (osteosarcoma) at any time point after inducing the expression of a mutant form of WT1 [Gene ID=7490].	www.broad.mit.e...
Broad FLECHNER_BIOPSY_KIDNEY_TRANSPLANT_REJECTED_VS_OK_DN	View Gene Set	4.929e-09	532	1.072e-07	110	Genes differentially expressed in kidney biopsies from patients with acute transplant rejection compared to the biopsies from patients with well functioning kidneys more than 1-year post transplant.	www.broad.mit.e...
Broad WAMUNYOKOLI_OVARIAN_CANCER_LMP_UP	View Gene Set	6.552e-09	244	1.412e-07	111	Genes up-regulated in mucinous ovarian carcinoma tumors of low malignant potential (LMP) compared to normal ovarian surface epithelium tissue.	www.broad.mit.e...
Broad AMIT_EGF_RESPONSE_60_MCF10A	View Gene Set	7.244e-09	38	1.547e-07	112	Genes whose expression peaked at 60 min after stimulation of MCF10A cells with EGF [Gene ID=1950].	www.broad.mit.e...
Broad MONNIER_POSTRADIATION_TUMOR_ESCAPE_DN	View Gene Set	7.364e-09	317	1.559e-07	113	The postradiation tumor escape signature: genes down-regulated in tumors from irradiated stroma vs those from non-irradiated stroma.	www.broad.mit.e...
Broad MOOTHA_PGC	View Gene Set	8.585e-09	329	1.801e-07	114	Genes up-regulated in differentiating C2C12 cells (myoblasts) upon expression of PPARGC1A [Gene ID=10891] off an adenoviral vector.	www.broad.mit.e...
Broad DACOSTA_UV_RESPONSE_VIA_ERCC3_UP	View Gene Set	9.025e-09	301	1.877e-07	115	Genes up-regulated in fibroblasts expressing mutant forms of ERCC3 [Gene ID=2071] after UV irradiation.	www.broad.mit.e...
Broad GOLDRATH_HOMEOSTATIC_PROLIFERATION	View Gene Set	1.018e-08	154	2.094e-07	116	Up-regulated in CD8+ [Gene ID=925] T lymphocytes undergoing homeostatic proliferation (HP) versus the naive cells; these genes are not up-regulated versus effector or memory cell population.	www.broad.mit.e...
Broad JIANG_HYPOXIA_NORMAL	View Gene Set	1.024e-08	213	2.094e-07	116	Genes up-regulated in RPTEC cells (normal kidney) by hypoxia.	www.broad.mit.e...
Broad NAGASHIMA_NRG1_SIGNALING_UP	View Gene Set	1.051e-08	171	2.131e-07	118	Genes up-regulated in MCF7 cells (breast cancer) after stimulation with NRG1 [Gene ID=3084].	www.broad.mit.e...
Broad SMID_BREAST_CANCER_BASAL_UP	View Gene Set	1.151e-08	629	2.313e-07	119	Genes up-regulated in basal subtype of breast cancer samles.	www.broad.mit.e...
Broad BLALOCK_ALZHEIMERS_DISEASE_UP	View Gene Set	1.176e-08	1641	2.344e-07	120	Genes up-regulated in brain from patients with Alzheimer's disease.	www.broad.mit.e...
Broad SHAFFER_IRF4_TARGETS_IN_MYELOMA_VS_MATURE_B_LYMPHOCYTE	View Gene Set	1.274e-08	95	2.519e-07	121	IRF4 [Gene ID=3662] target genes up-regulated in primary myeloma vs. mature B lymphocytes.	www.broad.mit.e...
Broad WANG_LMO4_TARGETS_UP	View Gene Set	1.289e-08	341	2.527e-07	122	Genes up-regulated in MCF7 cells (breast cancer) engineered to conditionally express LMO4 [Gene ID=8543] by a Tet Off system.	www.broad.mit.e...
Broad BENPORATH_MYC_MAX_TARGETS	View Gene Set	1.427e-08	768	2.776e-07	123	Set 'Myc targets2': targets of c-Myc [Gene ID=4609] and Max [Gene ID=4149] identified by ChIP on chip in a Burkitt???s lymphoma cell line; overlap set.	www.broad.mit.e...
Broad MISSIAGLIA_REGULATED_BY_METHYLATION_DN	View Gene Set	1.892e-08	96	3.65e-07	124	Genes down-regulated in PaCa44 and CFPAC1 cells (pancreatic cancer) after treatment with decitabine [PubChem=451668] a DNA hypomethylating agent similar to azacitidine [PubChem=9444].	www.broad.mit.e...
Broad WATANABE_RECTAL_CANCER_RADIOTHERAPY_RESPONSIVE_DN	View Gene Set	2.211e-08	90	4.231e-07	125	Genes down-regulated in rectal cancer patients resistant to radiotherapy (non-responders) relative to the sensitive ones (responders).	www.broad.mit.e...
Broad RUTELLA_RESPONSE_TO_CSF2RB_AND_IL4_UP	View Gene Set	2.272e-08	331	4.313e-07	126	Genes up-regulated in peripheral blood monocytes by CSF2RB (GM-CSF) [Gene ID=1437] and IL4 [Gene ID=3565].	www.broad.mit.e...
Broad LIU_CMYB_TARGETS_UP	View Gene Set	2.722e-08	158	5.127e-07	127	Genes up-regulated in MCF-7 cells (breast cancer) by overexpression of CMYB [Gene ID=4602] off adenovirus vector.	www.broad.mit.e...
Broad GRADE_COLON_AND_RECTAL_CANCER_UP	View Gene Set	3.271e-08	213	6.112e-07	128	Up-regulated genes in both rectal and colon carcinoma compared to normal mucosa samples.	www.broad.mit.e...
Broad DELYS_THYROID_CANCER_UP	View Gene Set	3.311e-08	397	6.139e-07	129	Genes up-regulated in papillary thyroid carcinoma (PTC) compared to normal tissue.	www.broad.mit.e...
Broad SCHLOSSER_MYC_TARGETS_REPRESSED_BY_SERUM	View Gene Set	3.798e-08	154	6.988e-07	130	Cluster 7: genes up-regulated in B493-6 cells (B lymphocytes) by MYC [Gene ID=4609] and down-regulated by the combination of MYC and serum.	www.broad.mit.e...
Broad NAKAMURA_TUMOR_ZONE_PERIPHERAL_VS_CENTRAL_DN	View Gene Set	4.672e-08	583	8.467e-07	131	Down-regulated genes in peripheral zone of human pancreatic cancer growing in the pancreas of nude mice compared to that of the tumor from the central zone.	www.broad.mit.e...
Broad MILI_PSEUDOPODIA_HAPTOTAXIS_DN	View Gene Set	4.651e-08	607	8.467e-07	131	Transcripts depleted from pseudopodia of NIH/3T3 cells (fibroblast) in response to haptotactic migratory stimulus by fibronectin FN1 [Gene ID=2335].	www.broad.mit.e...
Broad CHIARADONNA_NEOPLASTIC_TRANSFORMATION_CDC25_UP	View Gene Set	5.121e-08	110	9.21e-07	133	Genes up-regulated in reverted NIH3T3 cells (fibroblasts transformed by activated KRAS [Gene ID=3845] which then reverted to normal cells upon stable over-expression of a dominant negative form of CDC25 [Gene ID=5923]) vs normal fibroblasts.	www.broad.mit.e...
Broad RUIZ_TNC_TARGETS_DN	View Gene Set	6.669e-08	138	1.19e-06	134	Genes down-regulated in T98G cells (glioblastoma) by TNC [Gene ID=3371].	www.broad.mit.e...
Broad LIU_VMYB_TARGETS_UP	View Gene Set	6.923e-08	121	1.219e-06	135	Genes up-regulated in MCF-7 cells (breast cancer) by overexpression of v-MYB oncogenic varian of CMYB [Gene ID=4602] off adenovirus vector.	www.broad.mit.e...
Broad SEIDEN_ONCOGENESIS_BY_MET	View Gene Set	6.932e-08	83	1.219e-06	135	Genes changed in xenograft tumors formed by DLD-1 or DKO-4 cells (colon cancer) overexpressing MET [Gene ID=4233].	www.broad.mit.e...
Broad BLUM_RESPONSE_TO_SALIRASIB_DN	View Gene Set	8.006e-08	332	1.398e-06	137	Selected genes down-regulated in response to the Ras inhibitor salirasib [PubChem=5469318] in a panel of cancer cell lines with constantly active HRAS [Gene ID=3265].	www.broad.mit.e...
Broad LIU_SOX4_TARGETS_DN	View Gene Set	8.937e-08	297	1.546e-06	138	Genes down-regulated in LNCaP cells (prostate cancer) by overexpression of SOX4 [Gene ID=6659] and up-regulated by its RNAi knockdown.	www.broad.mit.e...
Broad HAMAI_APOPTOSIS_VIA_TRAIL_UP	View Gene Set	8.982e-08	328	1.546e-06	138	Genes up-regulated in T1 cells (primary melanoma sensitive to TRAIL [Gene ID=8743]) compared to G1 cells (metastatic melanoma resistant to TRAIL).	www.broad.mit.e...
Broad KAAB_FAILED_HEART_ATRIUM_DN	View Gene Set	1.069e-07	139	1.827e-06	140	Genes down-regulated in atria of failing hearts (DCM and ICM) compared to healthy controls.	www.broad.mit.e...
Broad SOTIRIOU_BREAST_CANCER_GRADE_1_VS_3_UP	View Gene Set	1.155e-07	143	1.96e-06	141	Up-regulated genes whose expression correlated with histologic grade of invasive breast cancer tumors: comparison of grade 1 vs grade 3.	www.broad.mit.e...
Broad LIAO_METASTASIS	View Gene Set	1.191e-07	513	2.007e-06	142	Genes up-regulated in the samples with intrahepatic metastatic hepatocellular carcinoma (HCC) vs primary HCC.	www.broad.mit.e...
Broad HOLLMAN_APOPTOSIS_VIA_CD40_UP	View Gene Set	1.252e-07	193	2.095e-06	143	Genes up-regulated in DLBCL (diffuse large B-cell lymphoma) cell lines sensitive to stimulation of CD40 [Gene ID=958] relative to the resistant ones.	www.broad.mit.e...
Broad PARENT_MTOR_SIGNALING_UP	View Gene Set	1.34e-07	541	2.226e-06	144	Genes up-regulated in HepaRG cells (liver cancer) expressing constituvely active form of MTOR [Gene ID=2475].	www.broad.mit.e...
Broad LINDGREN_BLADDER_CANCER_CLUSTER_1_DN	View Gene Set	1.381e-07	368	2.279e-06	145	Genes whose expression profile is specific to Custer I of urothelial cell carcinoma (UCC) tumors.	www.broad.mit.e...
Broad GOZGIT_ESR1_TARGETS_DN	View Gene Set	1.436e-07	710	2.337e-06	146	Genes down-regulated in TMX2-28 cells (breast cancer) which do not express ESR1 [Gene ID=2099]) compared to the parental MCF7 cells which do.	www.broad.mit.e...
Broad SCHLOSSER_MYC_TARGETS_AND_SERUM_RESPONSE_UP	View Gene Set	1.435e-07	45	2.337e-06	146	Cluster 5: genes up-regulated in B493-6 cells (B lymphocytes) by MYC [Gene ID=4609] alone or in combination with serum but not by serum alone.	www.broad.mit.e...
Broad ONKEN_UVEAL_MELANOMA_DN	View Gene Set	1.458e-07	509	2.356e-06	148	Genes down-regulated in uveal melanoma: class 2 vs class 1 tumors.	www.broad.mit.e...
Broad ENK_UV_RESPONSE_EPIDERMIS_DN	View Gene Set	1.681e-07	504	2.699e-06	149	Genes down-regulated in epidermis after to UVB irradiation.	www.broad.mit.e...
Broad FARMER_BREAST_CANCER_BASAL_VS_LULMINAL	View Gene Set	1.739e-07	317	2.774e-06	150	Genes which best discriminated between two groups of breast cancer according to the status of ESR1 and AR [Gene ID=2099 367]: basal (ESR1- AR-) and luminal (ESR1+ AR+).	www.broad.mit.e...
Broad PROVENZANI_METASTASIS_UP	View Gene Set	1.816e-07	188	2.874e-06	151	Genes up-regulated in polysomal and total RNA samples from SW480 cells (primary colorectal carcinoma CRC) compared to the SW620 cells (lymph node metastasis from the same individual).	www.broad.mit.e...
Broad ZHU_CMV_24_HR_UP	View Gene Set	1.826e-07	41	2.874e-06	151	Up-regulated at 24 h following infection of primary human foreskin fibroblasts with CMV	www.broad.mit.e...
Broad TOYOTA_TARGETS_OF_MIR34B_AND_MIR34C	View Gene Set	2.355e-07	436	3.682e-06	153	Genes down-regulated in HCT116 cells (colon cancer) upon expression of MIR34B or MIR34C [Gene ID=407041 407042] microRNAs.	www.broad.mit.e...
Broad DAIRKEE_TERT_TARGETS_UP	View Gene Set	2.581e-07	317	4.009e-06	154	Genes up-regulated in non-spontaneously immortalizing (NSI) primary breast cancer tumor cultures upon expression of TERT [Gene ID=7015] off a retroviral vector.	www.broad.mit.e...
Broad WINTER_HYPOXIA_METAGENE	View Gene Set	2.656e-07	216	4.099e-06	155	Genes regulated by hypoxia based on literature searches.	www.broad.mit.e...
Broad GOLDRATH_ANTIGEN_RESPONSE	View Gene Set	2.915e-07	315	4.469e-06	156	Genes up-regulated at the peak of an antigen response of naive CD8+ [Gene ID=925 926] T-cells.	www.broad.mit.e...
Broad CHEN_HOXA5_TARGETS_9HR_UP	View Gene Set	2.973e-07	210	4.53e-06	157	Differentially expressed genes 9 hr after tinduction of HoxA5 [Gene ID=3205] expression in a breast cancer cell line.	www.broad.mit.e...
Broad DANG_REGULATED_BY_MYC_DN	View Gene Set	3.124e-07	242	4.729e-06	158	Genes down-regulated by MYC [Gene ID=4609] according to the MYC Target Gene Database.	www.broad.mit.e...
Broad KIM_WT1_TARGETS_UP	View Gene Set	3.471e-07	207	5.21e-06	159	Genes up-regulated in UB27 cells (osteosarcoma) at any time point after inducing the expression of a mutant form of WT1 [Gene ID=7490].	www.broad.mit.e...
Broad BENPORATH_ES_1	View Gene Set	3.485e-07	367	5.21e-06	159	Set 'ES exp1': genes overexpressed in human embryonic stem cells according to 5 or more out of 20 profiling studies.	www.broad.mit.e...
Broad MARKEY_RB1_ACUTE_LOF_DN	View Gene Set	3.653e-07	201	5.427e-06	161	Genes down-regulated in adult fibroblasts with inactivated RB1 [Gene ID=5925] by Cre-lox: acute loss of function (LOF) of RB1.	www.broad.mit.e...
Broad TIEN_INTESTINE_PROBIOTICS_2HR_DN	View Gene Set	4.042e-07	85	5.969e-06	162	Genes down-regulated in Caco-2 cells (intestinal epithelium) after coculture with the probiotic bacteria L. casei for 2h.	www.broad.mit.e...
Broad FARMER_BREAST_CANCER_APOCRINE_VS_BASAL	View Gene Set	4.281e-07	321	6.283e-06	163	Genes which best discriminate between two groups of breast cancer according the status of ESR1 and AR [Gene ID=2099 367]: apocrine (ESR1- AR+) vs basal (ESR1- AR-).	www.broad.mit.e...
Broad RUTELLA_RESPONSE_TO_HGF_VS_CSF2RB_AND_IL4_DN	View Gene Set	4.376e-07	238	6.382e-06	164	Genes down-regulated in peripheral blood mononucleocytes by HGF [Gene ID=3082] compared to those regulated by CSF2RB (GM-CSF) [Gene ID=1437] and IL4 [Gene ID=3565].	www.broad.mit.e...
Broad KAAB_HEART_ATRIUM_VS_VENTRICLE_DN	View Gene Set	4.811e-07	257	6.974e-06	165	Genes up-regulated in the ventricles of healthy hearts compared to atria.	www.broad.mit.e...
Broad PAPASPYRIDONOS_UNSTABLE_ATEROSCLEROTIC_PLAQUE_UP	View Gene Set	5.023e-07	49	7.195e-06	166	Genes up-regulated in unstable ateroslerotic plaques compared to the stable ones.	www.broad.mit.e...
Broad PUJANA_ATM_PCC_NETWORK	View Gene Set	5.009e-07	1375	7.195e-06	166	Genes constituting the ATM-PCC network of transcripts whose expression positively correlated (Pearson correlation coefficient PCC >= 0.4) with that of ATM [Gene ID=472] across a compendium of normal tissues.	www.broad.mit.e...
Broad TARTE_PLASMA_CELL_VS_PLASMABLAST_DN	View Gene Set	5.093e-07	303	7.252e-06	168	Genes down-regulated in mature plasma cells compared with plasmablastic B lymphocytes.	www.broad.mit.e...
Broad CREIGHTON_ENDOCRINE_THERAPY_RESISTANCE_3	View Gene Set	5.492e-07	681	7.773e-06	169	The 'group 3 set' of genes associated with acquired endocrine therapy resistance in breast tumors expressing ESR1 and ERBB2 [Gene ID=2099 2064].	www.broad.mit.e...
Broad PODAR_RESPONSE_TO_ADAPHOSTIN_UP	View Gene Set	5.584e-07	140	7.857e-06	170	Up-regulated genes in MM1.S cells (multiple myeloma) treated with adaphostin [PubChem=387042] a tyrosine kinase inhibitor with anticancer properties.	www.broad.mit.e...
Broad AMIT_SERUM_RESPONSE_240_MCF10A	View Gene Set	5.909e-07	57	8.266e-06	171	Genes whose expression peaked at 240 min after stimulation of MCF10A cells with serum.	www.broad.mit.e...
Broad LINDGREN_BLADDER_CANCER_CLUSTER_2B	View Gene Set	6.061e-07	384	8.429e-06	172	Genes specifically up-regulated in Cluster IIb of urothelial cell carcinom (UCC) tumors.	www.broad.mit.e...
Broad SCHLOSSER_MYC_TARGETS_AND_SERUM_RESPONSE_DN	View Gene Set	6.443e-07	46	8.851e-06	173	Cluster 6: genes down-regulated in B493-6 cells (B lymphocytes) by MYC [Gene ID=4609] in combination with serum but not affected by serum alone; they are also up-regulated by MYC alone.	www.broad.mit.e...
Broad LIEN_BREAST_CARCINOMA_METAPLASTIC_VS_DUCTAL_UP	View Gene Set	6.456e-07	79	8.851e-06	173	Genes up-regulated between two breast carcinoma subtypes: metaplastic (MCB) and ductal (DCB).	www.broad.mit.e...
Broad BHATI_G2M_ARREST_BY_2METHOXYESTRADIOL_UP	View Gene Set	6.502e-07	116	8.851e-06	173	Up-regulated genes in MDA-MB-435 cells (breast cancer) undergoing G2/M arrest after treatment with 2-methoxyestradiol (2ME2)[PubChem=1573].	www.broad.mit.e...
Broad HAN_SATB1_TARGETS_UP	View Gene Set	6.513e-07	303	8.851e-06	173	Genes up-regulated in MDA-MB-231 cells (breast cancer) after knockdown of SATB1 [Gene ID=6304] by RNAi.	www.broad.mit.e...
Broad MARTINEZ_RESPONSE_TO_TRABECTEDIN_DN	View Gene Set	6.563e-07	212	8.869e-06	177	Genes down-regulated in at least 8 of 11 sarcoma cell lines by trabectedin [PubChem=3199].	www.broad.mit.e...
Broad DANG_MYC_TARGETS_UP	View Gene Set	7.09e-07	127	9.527e-06	178	Genes up-regulated by MYC [Gene ID=4609] and whose promoters are bound by MYC according to MYC Target Gene Database.	www.broad.mit.e...
Broad SWEET_LUNG_CANCER_KRAS_UP	View Gene Set	8.919e-07	436	1.192e-05	179	Genes up-regulated in the mouse lung cancer model with mutated KRAS [Gene ID=3845].	www.broad.mit.e...
Broad ROSTY_CERVICAL_CANCER_PROLIFERATION_CLUSTER	View Gene Set	9.183e-07	138	1.22e-05	180	The 'Cervical Cancer Proliferation Cluster' (CCPC): genes whose expression in cervical carcinoma positively correlates with that of the HPV E6 and E7 oncogenes; they are also differentially expressed according to disease outcome.	www.broad.mit.e...
Broad OUELLET_OVARIAN_CANCER_INVASIVE_VS_LMP_UP	View Gene Set	1.012e-06	114	1.337e-05	181	Genes up-regulated in epithelial ovarian cancer (EOC) biopsies: invasive (TOV) vs low malignant potential (LMP) tumors.	www.broad.mit.e...
Broad KIM_WT1_TARGETS_12HR_DN	View Gene Set	1.047e-06	200	1.377e-05	182	Genes down-regulated in UB27 cells (osteosarcoma) at 12 hr after inducing the expression of a mutated form of WT1 [Gene ID=7490].	www.broad.mit.e...
Broad PUJANA_BRCA2_PCC_NETWORK	View Gene Set	1.1e-06	410	1.438e-05	183	Genes constituting the BRCA2-PCC network of transcripts whose expression positively correlated (Pearson correlation coefficient PCC >= 0.4) with that of BRCA2 [Gene ID=675] across a compendium of normal tissues.	www.broad.mit.e...
Broad KAN_RESPONSE_TO_ARSENIC_TRIOXIDE	View Gene Set	1.184e-06	117	1.539e-05	184	Genes changed in U373-MG cells (malignant glioma) upon treatment with arsenic trioxide [PubChem=14888] a chemical that can cause autophagic cell death.	www.broad.mit.e...
Broad LU_AGING_BRAIN_DN	View Gene Set	1.252e-06	255	1.619e-05	185	Genes down-regulated in postmortem brain frontal cortex samples from old subjects compared to those from the young ones.	www.broad.mit.e...
Broad WANG_LMO4_TARGETS_DN	View Gene Set	1.314e-06	327	1.69e-05	186	Genes down-regulated in MCF7 cells (breast cancer) engineered to conditionally express LMO4 [Gene ID=8543] by a Tet Off system.	www.broad.mit.e...
Broad BYSTRYKH_HEMATOPOIESIS_STEM_CELL_QTL_TRANS	View Gene Set	1.386e-06	805	1.773e-05	187	Transcripts in hematopoietic stem cells (HSC) which are trans-regulated (i.e. modulated by a QTL (quantitative trait locus) not in a close proximity to the gene).	www.broad.mit.e...
Broad CHIANG_LIVER_CANCER_SUBCLASS_UNANNOTATED_DN	View Gene Set	1.417e-06	155	1.803e-05	188	Marker genes down-regulated in the 'unannotated' subclass of hepatocellular carcinoma (HCC) samples.	www.broad.mit.e...
Broad MOHANKUMAR_TLX1_TARGETS_UP	View Gene Set	1.518e-06	388	1.922e-05	189	Up-regulated in MCF7 cells (breast cancer) by TLX1 (HOX11) [Gene ID=3195].	www.broad.mit.e...
Broad RUTELLA_RESPONSE_TO_HGF_UP	View Gene Set	1.926e-06	409	2.424e-05	190	Genes up-regulated in peripheral blood monocytes by HGF [Gene ID=3082].	www.broad.mit.e...
Broad PAL_PRMT5_TARGETS_UP	View Gene Set	2.164e-06	178	2.711e-05	191	Genes up-regulated in NIH-3T3 cells (fibroblast) after knockdown of PRMT5 [Gene ID=10419] by RNAi.	www.broad.mit.e...
Broad MASSARWEH_TAMOXIFEN_RESISTANCE_UP	View Gene Set	2.252e-06	531	2.805e-05	192	Genes up-regulated in breast cancer tumors (formed by MCF-7 xenografts) resistant to tamoxifen [PubChem=5376].	www.broad.mit.e...
Broad RIGGINS_TAMOXIFEN_RESISTANCE_DN	View Gene Set	2.305e-06	211	2.856e-05	193	Genes down-regulated SUM44/LCCTam cells (breast cancer) resistant to 4-hydroxytamoxifen [PubChem=63062] relative to the parental SUM44 cells sensitive to the drug.	www.broad.mit.e...
Broad KOBAYASHI_EGFR_SIGNALING_6HR_DN	View Gene Set	2.325e-06	18	2.867e-05	194	Genes down-regulated in H1975 cells (non-small cell lung cancer NSCLC) resistant to gefitinib [PubChem=123631] after treatment with EGFR inhibitor CL-387785 [PubChem=2776] for 6h.	www.broad.mit.e...
Broad LI_WILMS_TUMOR_VS_FETAL_KIDNEY_1_UP	View Gene Set	2.775e-06	178	3.404e-05	195	Genes up-regulated in Wilm's tumor samples compared to fetal kidney.	www.broad.mit.e...
Broad HINATA_NFKB_TARGETS_KERATINOCYTE_UP	View Gene Set	2.813e-06	71	3.433e-05	196	Genes up-regulated in primary keratinocytes by expression of p50 (NFKB1) and p65 (RELA) [Gene ID=4790 5970] components of NFKB.	www.broad.mit.e...
Broad SESTO_RESPONSE_TO_UV_C6	View Gene Set	2.95e-06	39	3.582e-05	197	Cluster 6: genes changed in primary keratinocytes by UVB irradiation.	www.broad.mit.e...
Broad AMIT_EGF_RESPONSE_480_HELA	View Gene Set	3.496e-06	159	4.223e-05	198	Genes whose expression peaked at 480 min after stimulation of HeLa cells with EGF [Gene ID=1950].	www.broad.mit.e...
Broad WINNEPENNINCKX_MELANOMA_METASTASIS_UP	View Gene Set	3.532e-06	152	4.245e-05	199	Genes from the 254-gene classifier which were up-regulated in melanoma patients with a reported distant metastasis within 4 years.	www.broad.mit.e...
Broad ZHU_CMV_ALL_UP	View Gene Set	3.706e-06	60	4.432e-05	200	Up-regulated at any timepoint following infection of primary human foreskin fibroblasts with CMV	www.broad.mit.e...

Gene Set Collection: Broad.c2.CP

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: Broad.c2.CP.KEGG

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: Broad.c2.CP.REACTOME

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: Broad.c3.MIR

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: Broad.c3.TFT

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: Broad.c4.CGN

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Broad SA_FAS_SIGNALING	View Gene Set	0.001006	6	0.04728	1	The TNF-type receptor Fas induces apoptosis on ligand binding.	www.broad.mit.e...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Broad KEGG_PYRIMIDINE_METABOLISM	View Gene Set	1.662e-05	98	0.00252	1	Pyrimidine metabolism	www.broad.mit.e...
Broad KEGG_AMINOACYL_TRNA_BIOSYNTHESIS	View Gene Set	4.064e-05	41	0.00252	1	Aminoacyl-tRNA biosynthesis	www.broad.mit.e...
Broad KEGG_SPLICEOSOME	View Gene Set	3.394e-05	118	0.00252	1	Spliceosome	www.broad.mit.e...
Broad KEGG_CELL_CYCLE	View Gene Set	0.0001256	128	0.005842	4	Cell cycle	www.broad.mit.e...
Broad KEGG_PURINE_METABOLISM	View Gene Set	0.0004992	157	0.01857	5	Purine metabolism	www.broad.mit.e...
Broad KEGG_RNA_POLYMERASE	View Gene Set	0.001425	29	0.03998	6	RNA polymerase	www.broad.mit.e...
Broad KEGG_SMALL_CELL_LUNG_CANCER	View Gene Set	0.001505	84	0.03998	6	Small cell lung cancer	www.broad.mit.e...
Broad KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_BIOSYNTHESIS	View Gene Set	0.002035	11	0.04205	8	Valine leucine and isoleucine biosynthesis	www.broad.mit.e...
Broad KEGG_VIRAL_MYOCARDITIS	View Gene Set	0.001989	73	0.04205	8	Viral myocarditis	www.broad.mit.e...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Broad REACTOME_CELL_CYCLE_MITOTIC	View Gene Set	4.156e-06	306	0.001787	1	Genes involved in Cell Cycle Mitotic	www.broad.mit.e...
Broad REACTOME_ELONGATION_AND_PROCESSING_OF_CAPPED_TRANSCRIPTS	View Gene Set	7.249e-05	124	0.007793	2	Genes involved in Elongation and Processing of Capped Transcripts	www.broad.mit.e...
Broad REACTOME_GENE_EXPRESSION	View Gene Set	6.35e-05	415	0.007793	2	Genes involved in Gene Expression	www.broad.mit.e...
Broad REACTOME_MRNA_SPLICING	View Gene Set	4.311e-05	97	0.007793	2	Genes involved in mRNA Splicing	www.broad.mit.e...
Broad REACTOME_FORMATION_AND_MATURATION_OF_MRNA_TRANSCRIPT	View Gene Set	0.000229	142	0.01094	5	Genes involved in Formation and Maturation of mRNA Transcript	www.broad.mit.e...
Broad REACTOME_HIV_INFECTION	View Gene Set	0.0002192	183	0.01094	5	Genes involved in HIV Infection	www.broad.mit.e...
Broad REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA	View Gene Set	0.0001382	128	0.01094	5	Genes involved in Processing of Capped Intron-Containing Pre-mRNA	www.broad.mit.e...
Broad REACTOME_TRANSCRIPTION	View Gene Set	0.000204	188	0.01094	5	Genes involved in Transcription	www.broad.mit.e...
Broad REACTOME_CELLEXTRACELLULAR_MATRIX_INTERACTIONS	View Gene Set	0.0002054	16	0.01094	5	Genes involved in Cell-extracellular matrix interactions	www.broad.mit.e...
Broad REACTOME_S_PHASE	View Gene Set	0.0002742	103	0.01179	10	Genes involved in S Phase	www.broad.mit.e...
Broad REACTOME_RNA_POLYMERASE_I_PROMOTER_CLEARANCE	View Gene Set	0.0004093	82	0.01467	11	Genes involved in RNA PolymerasePromoter Clearance	www.broad.mit.e...
Broad REACTOME_MITOTIC_M_M_G1_PHASES	View Gene Set	0.0003874	157	0.01467	11	Genes involved in Mitotic M-M/G1 phases	www.broad.mit.e...
Broad REACTOME_MITOCHONDRIAL_TRNA_AMINOACYLATION	View Gene Set	0.0004794	20	0.01472	13	Genes involved in Mitochondrial tRNA aminoacylation	www.broad.mit.e...
Broad REACTOME_RNA_POLYMERASE_I_III_AND_MITOCHONDRIAL_TRANSCRIPTION	View Gene Set	0.0004698	120	0.01472	13	Genes involved in RNA Polymerase I RNA Polymerase III and Mitochondrial Transcription	www.broad.mit.e...
Broad REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS	View Gene Set	0.0005315	42	0.01524	15	Genes involved in Metabolism of vitamins and cofactors	www.broad.mit.e...
Broad REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS	View Gene Set	0.0008011	120	0.02153	16	Genes involved in Host Interactions of HIV factors	www.broad.mit.e...
Broad REACTOME_SMOOTH_MUSCLE_CONTRACTION	View Gene Set	0.001104	24	0.02793	17	Genes involved in Smooth Muscle Contraction	www.broad.mit.e...
Broad REACTOME_RNA_POLYMERASE_I_PROMOTER_OPENING	View Gene Set	0.001211	59	0.02893	18	Genes involved in RNA Polymerase I Promoter Opening	www.broad.mit.e...
Broad REACTOME_DNA_REPAIR	View Gene Set	0.001412	102	0.03195	19	Genes involved in DNA Repair	www.broad.mit.e...
Broad REACTOME_G1_S_TRANSITION	View Gene Set	0.001658	102	0.03564	20	Genes involved in G1/S Transition	www.broad.mit.e...
Broad REACTOME_TRNA_AMINOACYLATION	View Gene Set	0.001806	40	0.03698	21	Genes involved in tRNA Aminoacylation	www.broad.mit.e...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Broad GTGCCTT MIR-506	View Gene Set	0.0002652	605	0.03705	1	Targets of MicroRNA GTGCCTT MIR-506	www.broad.mit.e... MIR-506...
Broad TATCTGG MIR-488	View Gene Set	0.0005029	49	0.03705	1	Targets of MicroRNA TATCTGG MIR-488	www.broad.mit.e... MIR-488...
Broad ATTCTTT MIR-186	View Gene Set	0.0003763	232	0.03705	1	Targets of MicroRNA ATTCTTT MIR-186	www.broad.mit.e... MIR-186...
Broad CTACTGT MIR-199A	View Gene Set	0.0008286	146	0.03806	4	Targets of MicroRNA CTACTGT MIR-199A	www.broad.mit.e... MIR-199A...
Broad ACACTAC MIR-142-3P	View Gene Set	0.000861	110	0.03806	4	Targets of MicroRNA ACACTAC MIR-142-3P	www.broad.mit.e... MIR-142-3P...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Broad SCGGAAGY_V$ELK1_02	View Gene Set	8.248e-08	784	2.849e-05	1	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif SCGGAAGY which matches annotation for ELK1: ELK1 member of ETS oncogene family	www.broad.mit.e...
Broad GGGCGGR_V$SP1_Q6	View Gene Set	9.267e-08	2120	2.849e-05	1	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GGGCGGR which matches annotation for SP1: Sp1 transcription factor	www.broad.mit.e...
Broad CACGTG_V$MYC_Q2	View Gene Set	2.287e-06	734	0.0004688	3	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif CACGTG which matches annotation for MYC: v-myc myelocytomatosis viral oncogene homolog (avian)	www.broad.mit.e...
Broad V$USF_01	View Gene Set	4.983e-06	186	0.0007661	4	Genes with promoter regions [-2kb 2kb] around transcription start site containing motif NNRYCACGTGRYNN. Motif does not match any known transcription factor	www.broad.mit.e...
Broad V$SREBP1_01	View Gene Set	3.012e-05	133	0.003705	5	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NATCACGTGAY which matches annotation for SREBF1: sterol regulatory element binding transcription factor 1	www.broad.mit.e...
Broad MGGAAGTG_V$GABP_B	View Gene Set	7.622e-05	512	0.007509	6	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif MGGAAGTG which matches annotation for GABPA: GA binding protein transcription factor alpha subunit 60kDa<br> GABPB2: GA binding protein transcription factor beta subunit 2	www.broad.mit.e...
Broad RCGCANGCGY_V$NRF1_Q6	View Gene Set	8.547e-05	580	0.007509	6	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif RCGCANGCGY which matches annotation for NRF1: nuclear respiratory factor 1	www.broad.mit.e...
Broad GCGNNANTTCC_UNKNOWN	View Gene Set	0.0003477	85	0.02673	8	Genes with promoter regions [-2kb 2kb] around transcription start site containing motif GCGNNANTTCC. Motif does not match any known transcription factor	www.broad.mit.e...
Broad TGANTCA_V$AP1_C	View Gene Set	0.0005233	850	0.03576	9	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TGANTCA which matches annotation for JUN: jun oncogene	www.broad.mit.e...
Broad V$ELK1_02	View Gene Set	0.0005961	170	0.03666	10	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNNNCCGGAARTNN which matches annotation for ELK1: ELK1 member of ETS oncogene family	www.broad.mit.e...
Broad V$MAX_01	View Gene Set	0.0007927	194	0.04432	11	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNANCACGTGNTNN which matches annotation for MAX: MYC associated factor X	www.broad.mit.e...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Broad MORF_RAD23A	View Gene Set	4.627e-19	316	1.976e-16	1	Neighborhood of RAD23A	www.broad.mit.e...
Broad MORF_BUB3	View Gene Set	1.542e-18	256	3.292e-16	2	Neighborhood of BUB3	www.broad.mit.e...
Broad MORF_EIF3S2	View Gene Set	2.226e-16	220	3.168e-14	3	Neighborhood of EIF3S2	www.broad.mit.e...
Broad MORF_HDAC2	View Gene Set	9.431e-16	256	1.007e-13	4	Neighborhood of HDAC2	www.broad.mit.e...
Broad MORF_SOD1	View Gene Set	1.145e-14	247	9.781e-13	5	Neighborhood of SOD1	www.broad.mit.e...
Broad MORF_CSNK2B	View Gene Set	5.04e-14	256	3.587e-12	6	Neighborhood of CSNK2B	www.broad.mit.e...
Broad MORF_HDAC1	View Gene Set	2.12e-13	222	1.293e-11	7	Neighborhood of HDAC1	www.broad.mit.e...
Broad MORF_GNB1	View Gene Set	1.147e-12	276	6.124e-11	8	Neighborhood of GNB1	www.broad.mit.e...
Broad MORF_PRKDC	View Gene Set	4.079e-11	173	1.935e-09	9	Neighborhood of PRKDC	www.broad.mit.e...
Broad MORF_FBL	View Gene Set	5.402e-11	121	2.306e-09	10	Neighborhood of FBL	www.broad.mit.e...
Broad MORF_AATF	View Gene Set	9.854e-11	179	3.506e-09	11	Neighborhood of AATF	www.broad.mit.e...
Broad MORF_PPP1CC	View Gene Set	9.488e-11	150	3.506e-09	11	Neighborhood of PPP1CC	www.broad.mit.e...
Broad MORF_DEK	View Gene Set	1.756e-10	229	5.769e-09	13	Neighborhood of DEK	www.broad.mit.e...
Broad MORF_PPP1CA	View Gene Set	2.402e-10	145	7.326e-09	14	Neighborhood of PPP1CA	www.broad.mit.e...
Broad MORF_XRCC5	View Gene Set	3e-10	210	8.541e-09	15	Neighborhood of XRCC5	www.broad.mit.e...
Broad MORF_HAT1	View Gene Set	4.816e-10	155	1.285e-08	16	Neighborhood of HAT1	www.broad.mit.e...
Broad MORF_RPA2	View Gene Set	1.031e-09	170	2.447e-08	17	Neighborhood of RPA2	www.broad.mit.e...
Broad MORF_SKP1A	View Gene Set	1.002e-09	175	2.447e-08	17	Neighborhood of SKP1A	www.broad.mit.e...
Broad MORF_RAD23B	View Gene Set	1.441e-09	159	3.179e-08	19	Neighborhood of RAD23B	www.broad.mit.e...
Broad GCM_APEX1	View Gene Set	1.489e-09	102	3.179e-08	19	Neighborhood of APEX1	www.broad.mit.e...
Broad MORF_RAD21	View Gene Set	5.24e-09	157	1.036e-07	21	Neighborhood of RAD21	www.broad.mit.e...
Broad MORF_ANP32B	View Gene Set	5.336e-09	174	1.036e-07	21	Neighborhood of ANP32B	www.broad.mit.e...
Broad MORF_RAN	View Gene Set	8.214e-09	242	1.525e-07	23	Neighborhood of RAN	www.broad.mit.e...
Broad MORF_DNMT1	View Gene Set	2.417e-08	105	4.142e-07	24	Neighborhood of DNMT1	www.broad.mit.e...
Broad MORF_ACP1	View Gene Set	2.425e-08	178	4.142e-07	24	Neighborhood of ACP1	www.broad.mit.e...
Broad MORF_PAPSS1	View Gene Set	3.333e-08	98	5.474e-07	26	Neighborhood of PAPSS1	www.broad.mit.e...
Broad GNF2_APEX1	View Gene Set	5.982e-08	72	9.46e-07	27	Neighborhood of APEX1	www.broad.mit.e...
Broad MORF_UBE2I	View Gene Set	6.913e-08	208	1.054e-06	28	Neighborhood of UBE2I	www.broad.mit.e...
Broad MORF_AP2M1	View Gene Set	1.044e-07	197	1.537e-06	29	Neighborhood of AP2M1	www.broad.mit.e...
Broad MORF_RFC4	View Gene Set	1.122e-07	137	1.597e-06	30	Neighborhood of RFC4	www.broad.mit.e...
Broad MORF_PCNA	View Gene Set	1.203e-07	71	1.657e-06	31	Neighborhood of PCNA	www.broad.mit.e...
Broad MORF_G22P1	View Gene Set	1.725e-07	145	2.302e-06	32	Neighborhood of G22P1	www.broad.mit.e...
Broad MORF_RRM1	View Gene Set	3.086e-07	90	3.993e-06	33	Neighborhood of RRM1	www.broad.mit.e...
Broad MORF_DAP3	View Gene Set	3.203e-07	175	4.023e-06	34	Neighborhood of DAP3	www.broad.mit.e...
Broad GCM_ACTG1	View Gene Set	3.335e-07	113	4.069e-06	35	Neighborhood of ACTG1	www.broad.mit.e...
Broad MORF_EI24	View Gene Set	4.115e-07	136	4.881e-06	36	Neighborhood of EI24	www.broad.mit.e...
Broad GNF2_NS	View Gene Set	5.107e-07	35	5.893e-06	37	Neighborhood of NS	www.broad.mit.e...
Broad MORF_ESPL1	View Gene Set	9.917e-07	58	1.114e-05	38	Neighborhood of ESPL1	www.broad.mit.e...
Broad MORF_MAP2K2	View Gene Set	1.272e-06	123	1.393e-05	39	Neighborhood of MAP2K2	www.broad.mit.e...
Broad GCM_CSNK2B	View Gene Set	1.412e-06	88	1.507e-05	40	Neighborhood of CSNK2B	www.broad.mit.e...
Broad MORF_DEAF1	View Gene Set	1.962e-06	54	2.043e-05	41	Neighborhood of DEAF1	www.broad.mit.e...
Broad MORF_CDC16	View Gene Set	2.452e-06	67	2.493e-05	42	Neighborhood of CDC16	www.broad.mit.e...
Broad MORF_CTBP1	View Gene Set	2.573e-06	149	2.555e-05	43	Neighborhood of CTBP1	www.broad.mit.e...
Broad MORF_PSMC1	View Gene Set	2.715e-06	162	2.576e-05	44	Neighborhood of PSMC1	www.broad.mit.e...
Broad MORF_CDK2	View Gene Set	2.693e-06	63	2.576e-05	44	Neighborhood of CDK2	www.broad.mit.e...
Broad MORF_RAC1	View Gene Set	3.199e-06	196	2.97e-05	46	Neighborhood of RAC1	www.broad.mit.e...
Broad MORF_ERH	View Gene Set	3.512e-06	103	3.158e-05	47	Neighborhood of ERH	www.broad.mit.e...
Broad GNF2_SERPINB5	View Gene Set	3.55e-06	25	3.158e-05	47	Neighborhood of SERPINB5	www.broad.mit.e...
Broad MORF_PRDX3	View Gene Set	4.824e-06	79	4.204e-05	49	Neighborhood of PRDX3	www.broad.mit.e...
Broad MORF_UBE2N	View Gene Set	5.916e-06	79	5.053e-05	50	Neighborhood of UBE2N	www.broad.mit.e...
Broad MORF_RAB5A	View Gene Set	8.896e-06	83	7.448e-05	51	Neighborhood of RAB5A	www.broad.mit.e...
Broad MORF_EIF3S6	View Gene Set	9.691e-06	108	7.958e-05	52	Neighborhood of EIF3S6	www.broad.mit.e...
Broad MORF_PTPN11	View Gene Set	1.051e-05	93	8.47e-05	53	Neighborhood of PTPN11	www.broad.mit.e...
Broad MORF_PRKAG1	View Gene Set	1.302e-05	202	0.000103	54	Neighborhood of PRKAG1	www.broad.mit.e...
Broad GCM_PSME1	View Gene Set	1.603e-05	76	0.0001229	55	Neighborhood of PSME1	www.broad.mit.e...
Broad GCM_NPM1	View Gene Set	1.612e-05	108	0.0001229	55	Neighborhood of NPM1	www.broad.mit.e...
Broad MORF_AP3D1	View Gene Set	1.983e-05	119	0.0001485	57	Neighborhood of AP3D1	www.broad.mit.e...
Broad GNF2_CDH3	View Gene Set	2.12e-05	24	0.0001561	58	Neighborhood of CDH3	www.broad.mit.e...
Broad MORF_UNG	View Gene Set	2.163e-05	65	0.0001565	59	Neighborhood of UNG	www.broad.mit.e...
Broad GNF2_NPM1	View Gene Set	2.754e-05	57	0.000196	60	Neighborhood of NPM1	www.broad.mit.e...
Broad GNF2_FBL	View Gene Set	3.177e-05	119	0.0002224	61	Neighborhood of FBL	www.broad.mit.e...
Broad GCM_CRKL	View Gene Set	3.358e-05	50	0.0002313	62	Neighborhood of CRKL	www.broad.mit.e...
Broad GCM_CBFB	View Gene Set	3.671e-05	59	0.0002488	63	Neighborhood of CBFB	www.broad.mit.e...
Broad GNF2_KPNB1	View Gene Set	4.639e-05	52	0.0003095	64	Neighborhood of KPNB1	www.broad.mit.e...
Broad GNF2_RAN	View Gene Set	4.722e-05	78	0.0003102	65	Neighborhood of RAN	www.broad.mit.e...
Broad MORF_PHB	View Gene Set	4.826e-05	112	0.0003122	66	Neighborhood of PHB	www.broad.mit.e...
Broad MORF_BMI1	View Gene Set	4.996e-05	71	0.0003184	67	Neighborhood of BMI1	www.broad.mit.e...
Broad GNF2_RRM1	View Gene Set	6.732e-05	82	0.0004227	68	Neighborhood of RRM1	www.broad.mit.e...
Broad MORF_MSH2	View Gene Set	7.249e-05	52	0.0004486	69	Neighborhood of MSH2	www.broad.mit.e...
Broad MORF_MTA1	View Gene Set	7.492e-05	95	0.000457	70	Neighborhood of MTA1	www.broad.mit.e...
Broad GNF2_STAT6	View Gene Set	7.93e-05	75	0.0004769	71	Neighborhood of STAT6	www.broad.mit.e...
Broad MORF_RAB1A	View Gene Set	9.075e-05	179	0.0005382	72	Neighborhood of RAB1A	www.broad.mit.e...
Broad GNF2_PA2G4	View Gene Set	0.000105	73	0.0006144	73	Neighborhood of PA2G4	www.broad.mit.e...
Broad MORF_SMC1L1	View Gene Set	0.0001133	47	0.0006539	74	Neighborhood of SMC1L1	www.broad.mit.e...
Broad MORF_GSPT1	View Gene Set	0.0001155	41	0.0006576	75	Neighborhood of GSPT1	www.broad.mit.e...
Broad MORF_PSMC2	View Gene Set	0.0001499	100	0.000842	76	Neighborhood of PSMC2	www.broad.mit.e...
Broad MORF_RAD54L	View Gene Set	0.0001618	94	0.0008972	77	Neighborhood of RAD54L	www.broad.mit.e...
Broad MORF_GMPS	View Gene Set	0.0001756	48	0.0009614	78	Neighborhood of GMPS	www.broad.mit.e...
Broad MORF_CDC10	View Gene Set	0.0002109	120	0.00114	79	Neighborhood of CDC10	www.broad.mit.e...
Broad GCM_DDX5	View Gene Set	0.0002195	52	0.001172	80	Neighborhood of DDX5	www.broad.mit.e...
Broad GCM_ANP32B	View Gene Set	0.0002692	32	0.001419	81	Neighborhood of ANP32B	www.broad.mit.e...
Broad MORF_NPM1	View Gene Set	0.0002843	152	0.00148	82	Neighborhood of NPM1	www.broad.mit.e...
Broad MORF_DDB1	View Gene Set	0.0002964	220	0.001507	83	Neighborhood of DDB1	www.broad.mit.e...
Broad GCM_PPP1CC	View Gene Set	0.0002952	47	0.001507	83	Neighborhood of PPP1CC	www.broad.mit.e...
Broad GNF2_MMP1	View Gene Set	0.0003065	32	0.001539	85	Neighborhood of MMP1	www.broad.mit.e...
Broad MORF_FEN1	View Gene Set	0.000322	58	0.001599	86	Neighborhood of FEN1	www.broad.mit.e...
Broad GNF2_RRM2	View Gene Set	0.0003856	36	0.001892	87	Neighborhood of RRM2	www.broad.mit.e...
Broad MORF_PPP6C	View Gene Set	0.0004007	88	0.001944	88	Neighborhood of PPP6C	www.broad.mit.e...
Broad GCM_RAB10	View Gene Set	0.0004876	143	0.002339	89	Neighborhood of RAB10	www.broad.mit.e...
Broad MORF_ATOX1	View Gene Set	0.0005253	72	0.002492	90	Neighborhood of ATOX1	www.broad.mit.e...
Broad GCM_MAP4K4	View Gene Set	0.000637	144	0.002989	91	Neighborhood of MAP4K4	www.broad.mit.e...
Broad GNF2_ANP32B	View Gene Set	0.0006525	29	0.003029	92	Neighborhood of ANP32B	www.broad.mit.e...
Broad MORF_DAP	View Gene Set	0.0006867	72	0.003153	93	Neighborhood of DAP	www.broad.mit.e...
Broad MORF_BUB1	View Gene Set	0.0007405	49	0.003364	94	Neighborhood of BUB1	www.broad.mit.e...
Broad MORF_NME2	View Gene Set	0.0007685	145	0.003418	95	Neighborhood of NME2	www.broad.mit.e...
Broad MORF_PPP2CA	View Gene Set	0.0007624	110	0.003418	95	Neighborhood of PPP2CA	www.broad.mit.e...
Broad GNF2_HAT1	View Gene Set	0.0008022	45	0.003531	97	Neighborhood of HAT1	www.broad.mit.e...
Broad GNF2_SMC4L1	View Gene Set	0.0008348	75	0.003637	98	Neighborhood of SMC4L1	www.broad.mit.e...
Broad GNF2_CKS1B	View Gene Set	0.0008693	36	0.003749	99	Neighborhood of CKS1B	www.broad.mit.e...
Broad GNF2_MSH6	View Gene Set	0.0009901	30	0.004228	100	Neighborhood of MSH6	www.broad.mit.e...
Broad MORF_MBD4	View Gene Set	0.00114	76	0.004821	101	Neighborhood of MBD4	www.broad.mit.e...
Broad GCM_HBP1	View Gene Set	0.001317	54	0.00546	102	Neighborhood of HBP1	www.broad.mit.e...
Broad GNF2_CDC2	View Gene Set	0.001312	56	0.00546	102	Neighborhood of CDC2	www.broad.mit.e...
Broad MORF_SART1	View Gene Set	0.001352	55	0.005553	104	Neighborhood of SART1	www.broad.mit.e...
Broad MORF_CCNI	View Gene Set	0.001385	76	0.005634	105	Neighborhood of CCNI	www.broad.mit.e...
Broad GNF2_SMC1L1	View Gene Set	0.001718	24	0.006919	106	Neighborhood of SMC1L1	www.broad.mit.e...
Broad GNF2_INPP5D	View Gene Set	0.0018	38	0.007182	107	Neighborhood of INPP5D	www.broad.mit.e...
Broad GNF2_MLH1	View Gene Set	0.001883	36	0.007322	108	Neighborhood of MLH1	www.broad.mit.e...
Broad GNF2_RFC4	View Gene Set	0.001886	57	0.007322	108	Neighborhood of RFC4	www.broad.mit.e...
Broad GNF2_MSN	View Gene Set	0.001855	24	0.007322	108	Neighborhood of MSN	www.broad.mit.e...
Broad GNF2_HLA-C	View Gene Set	0.002181	44	0.008391	111	Neighborhood of HLA-C	www.broad.mit.e...
Broad GNF2_HDAC1	View Gene Set	0.002224	85	0.00848	112	Neighborhood of HDAC1	www.broad.mit.e...
Broad GCM_PFN1	View Gene Set	0.002285	47	0.008636	113	Neighborhood of PFN1	www.broad.mit.e...
Broad MORF_RPA1	View Gene Set	0.002308	55	0.008643	114	Neighborhood of RPA1	www.broad.mit.e...
Broad GCM_RAD21	View Gene Set	0.002392	30	0.008882	115	Neighborhood of RAD21	www.broad.mit.e...
Broad MORF_CUL1	View Gene Set	0.002525	62	0.009295	116	Neighborhood of CUL1	www.broad.mit.e...
Broad MORF_TERF1	View Gene Set	0.002569	57	0.009298	117	Neighborhood of TERF1	www.broad.mit.e...
Broad GNF2_HMMR	View Gene Set	0.002569	43	0.009298	117	Neighborhood of HMMR	www.broad.mit.e...
Broad GNF2_RFC3	View Gene Set	0.002814	38	0.0101	119	Neighborhood of RFC3	www.broad.mit.e...
Broad GNF2_MCM5	View Gene Set	0.003046	51	0.01084	120	Neighborhood of MCM5	www.broad.mit.e...
Broad MORF_RAB6A	View Gene Set	0.003284	63	0.01159	121	Neighborhood of RAB6A	www.broad.mit.e...
Broad GNF2_ESPL1	View Gene Set	0.003369	35	0.01179	122	Neighborhood of ESPL1	www.broad.mit.e...
Broad GNF2_CENPF	View Gene Set	0.003777	56	0.01311	123	Neighborhood of CENPF	www.broad.mit.e...
Broad GCM_ERBB2IP	View Gene Set	0.004116	57	0.01417	124	Neighborhood of ERBB2IP	www.broad.mit.e...
Broad MORF_PPP2R4	View Gene Set	0.00426	44	0.01432	125	Neighborhood of PPP2R4	www.broad.mit.e...
Broad GNF2_CCNA2	View Gene Set	0.004236	62	0.01432	125	Neighborhood of CCNA2	www.broad.mit.e...
Broad GNF2_CD53	View Gene Set	0.004212	54	0.01432	125	Neighborhood of CD53	www.broad.mit.e...
Broad GCM_CSNK1A1	View Gene Set	0.004438	28	0.0148	128	Neighborhood of CSNK1A1	www.broad.mit.e...
Broad GCM_TPT1	View Gene Set	0.004676	69	0.01548	129	Neighborhood of TPT1	www.broad.mit.e...
Broad MORF_RAF1	View Gene Set	0.00497	94	0.01633	130	Neighborhood of RAF1	www.broad.mit.e...
Broad MORF_IKBKG	View Gene Set	0.006231	119	0.02031	131	Neighborhood of IKBKG	www.broad.mit.e...
Broad GNF2_CDC20	View Gene Set	0.006323	52	0.02045	132	Neighborhood of CDC20	www.broad.mit.e...
Broad GNF2_CENPE	View Gene Set	0.006566	37	0.02108	133	Neighborhood of CENPE	www.broad.mit.e...
Broad MORF_TERF2IP	View Gene Set	0.006765	99	0.0214	134	Neighborhood of TERF2IP	www.broad.mit.e...
Broad GNF2_DENR	View Gene Set	0.006762	39	0.0214	134	Neighborhood of DENR	www.broad.mit.e...
Broad GNF2_PCNA	View Gene Set	0.007019	62	0.02204	136	Neighborhood of PCNA	www.broad.mit.e...
Broad MORF_UBE2A	View Gene Set	0.007132	44	0.02207	137	Neighborhood of UBE2A	www.broad.mit.e...
Broad GNF2_MCL1	View Gene Set	0.007086	49	0.02207	137	Neighborhood of MCL1	www.broad.mit.e...
Broad GNF2_SPTA1	View Gene Set	0.00722	75	0.02218	139	Neighborhood of SPTA1	www.broad.mit.e...
Broad GNF2_CD48	View Gene Set	0.007337	31	0.02238	140	Neighborhood of CD48	www.broad.mit.e...
Broad MORF_XPC	View Gene Set	0.008332	55	0.02514	141	Neighborhood of XPC	www.broad.mit.e...
Broad GNF2_CCNB2	View Gene Set	0.00836	53	0.02514	141	Neighborhood of CCNB2	www.broad.mit.e...
Broad MORF_USP5	View Gene Set	0.008468	46	0.02529	143	Neighborhood of USP5	www.broad.mit.e...
Broad GNF2_VAV1	View Gene Set	0.008821	34	0.02616	144	Neighborhood of VAV1	www.broad.mit.e...
Broad GNF2_RPA1	View Gene Set	0.009006	20	0.02652	145	Neighborhood of RPA1	www.broad.mit.e...
Broad GCM_PTK2	View Gene Set	0.01004	126	0.02921	146	Neighborhood of PTK2	www.broad.mit.e...
Broad GNF2_CBFB	View Gene Set	0.01006	26	0.02921	146	Neighborhood of CBFB	www.broad.mit.e...
Broad GCM_SMARCC1	View Gene Set	0.01023	33	0.02951	148	Neighborhood of SMARCC1	www.broad.mit.e...
Broad GNF2_PTX3	View Gene Set	0.01047	36	0.02981	149	Neighborhood of PTX3	www.broad.mit.e...
Broad GNF2_RBBP6	View Gene Set	0.01045	54	0.02981	149	Neighborhood of RBBP6	www.broad.mit.e...
Broad MORF_SP3	View Gene Set	0.01057	69	0.0299	151	Neighborhood of SP3	www.broad.mit.e...
Broad GNF2_ELAC2	View Gene Set	0.01075	32	0.0302	152	Neighborhood of ELAC2	www.broad.mit.e...
Broad GNF2_BUB1	View Gene Set	0.01115	25	0.03112	153	Neighborhood of BUB1	www.broad.mit.e...
Broad GNF2_MSH2	View Gene Set	0.01141	26	0.03143	154	Neighborhood of MSH2	www.broad.mit.e...
Broad GNF2_DAP3	View Gene Set	0.01139	98	0.03143	154	Neighborhood of DAP3	www.broad.mit.e...
Broad GNF2_BUB1B	View Gene Set	0.01166	46	0.03191	156	Neighborhood of BUB1B	www.broad.mit.e...
Broad GCM_SIRT2	View Gene Set	0.01187	39	0.03227	157	Neighborhood of SIRT2	www.broad.mit.e...
Broad GNF2_XRCC5	View Gene Set	0.01315	61	0.03554	158	Neighborhood of XRCC5	www.broad.mit.e...
Broad MORF_ACTG1	View Gene Set	0.01339	134	0.03595	159	Neighborhood of ACTG1	www.broad.mit.e...
Broad GNF2_MCM4	View Gene Set	0.01397	50	0.03728	160	Neighborhood of MCM4	www.broad.mit.e...
Broad GCM_HDAC1	View Gene Set	0.01427	30	0.03757	161	Neighborhood of HDAC1	www.broad.mit.e...
Broad GNF2_CDC27	View Gene Set	0.01434	56	0.03757	161	Neighborhood of CDC27	www.broad.mit.e...
Broad GNF2_MKI67	View Gene Set	0.01422	26	0.03757	161	Neighborhood of MKI67	www.broad.mit.e...
Broad GNF2_DEK	View Gene Set	0.01449	45	0.03773	164	Neighborhood of DEK	www.broad.mit.e...
Broad MORF_CSNK1D	View Gene Set	0.01491	65	0.03857	165	Neighborhood of CSNK1D	www.broad.mit.e...
Broad GNF2_PECAM1	View Gene Set	0.01594	50	0.04099	166	Neighborhood of PECAM1	www.broad.mit.e...
Broad GNF2_RAP1B	View Gene Set	0.01609	33	0.04113	167	Neighborhood of RAP1B	www.broad.mit.e...
Broad GNF2_LYN	View Gene Set	0.01766	26	0.04488	168	Neighborhood of LYN	www.broad.mit.e...
Broad MORF_EIF4A2	View Gene Set	0.01815	120	0.04539	169	Neighborhood of EIF4A2	www.broad.mit.e...
Broad MORF_PRKAR1A	View Gene Set	0.01818	133	0.04539	169	Neighborhood of PRKAR1A	www.broad.mit.e...
Broad GNF2_MYD88	View Gene Set	0.01808	55	0.04539	169	Neighborhood of MYD88	www.broad.mit.e...
Broad MORF_CCNF	View Gene Set	0.01865	65	0.04631	172	Neighborhood of CCNF	www.broad.mit.e...
Broad GNF2_H2AFX	View Gene Set	0.01962	28	0.04842	173	Neighborhood of H2AFX	www.broad.mit.e...
Broad MORF_ERCC2	View Gene Set	0.01989	91	0.04881	174	Neighborhood of ERCC2	www.broad.mit.e...
Broad MORF_BUB1B	View Gene Set	0.02058	61	0.04936	175	Neighborhood of BUB1B	www.broad.mit.e...
Broad MORF_PPP2R5E	View Gene Set	0.02055	76	0.04936	175	Neighborhood of PPP2R5E	www.broad.mit.e...
Broad GCM_DFFA	View Gene Set	0.02054	100	0.04936	175	Neighborhood of DFFA	www.broad.mit.e...
Broad GNF2_CDH11	View Gene Set	0.02047	25	0.04936	175	Neighborhood of CDH11	www.broad.mit.e...

Gene Set Collection: Broad.c4.CM

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Broad module_3	View Gene Set	1.768e-23	374	8.029e-21	1	Genes in module_3	www.broad.mit.e...
Broad module_52	View Gene Set	4.195e-16	415	9.523e-14	2	Genes in module_52	www.broad.mit.e...
Broad module_17	View Gene Set	4.451e-15	351	6.736e-13	3	Genes in module_17	www.broad.mit.e...
Broad module_8	View Gene Set	1.767e-13	403	2.005e-11	4	Genes in module_8	www.broad.mit.e...
Broad module_18	View Gene Set	1.494e-12	434	1.356e-10	5	Genes in module_18	www.broad.mit.e...
Broad module_198	View Gene Set	1.269e-10	288	9.603e-09	6	Genes in module_198	www.broad.mit.e...
Broad module_252	View Gene Set	2.356e-09	224	1.337e-07	7	Genes in module_252	www.broad.mit.e...
Broad module_321	View Gene Set	2.115e-09	107	1.337e-07	7	Genes in module_321	www.broad.mit.e...
Broad module_105	View Gene Set	3.138e-09	192	1.583e-07	9	Genes in module_105	www.broad.mit.e...
Broad module_54	View Gene Set	7.822e-09	242	3.551e-07	10	Genes in module_54	www.broad.mit.e...
Broad module_98	View Gene Set	2.128e-08	375	8.784e-07	11	Genes in module_98	www.broad.mit.e...
Broad module_32	View Gene Set	2.371e-08	227	8.972e-07	12	Genes in module_32	www.broad.mit.e...
Broad module_357	View Gene Set	9.83e-08	78	3.433e-06	13	Genes in module_357	www.broad.mit.e...
Broad module_118	View Gene Set	1.974e-07	393	6.4e-06	14	Genes in module_118	www.broad.mit.e...
Broad module_297	View Gene Set	2.188e-07	78	6.623e-06	15	Genes in module_297	www.broad.mit.e...
Broad module_124	View Gene Set	2.637e-07	92	7.483e-06	16	Genes in module_124	www.broad.mit.e...
Broad module_15	View Gene Set	5.273e-07	347	1.33e-05	17	Genes in module_15	www.broad.mit.e...
Broad module_126	View Gene Set	5.146e-07	173	1.33e-05	17	Genes in module_126	www.broad.mit.e...
Broad module_61	View Gene Set	7.05e-07	50	1.685e-05	19	Genes in module_61	www.broad.mit.e...
Broad module_154	View Gene Set	1.825e-06	73	4.142e-05	20	Genes in module_154	www.broad.mit.e...
Broad module_159	View Gene Set	2.926e-06	81	6.325e-05	21	Genes in module_159	www.broad.mit.e...
Broad module_363	View Gene Set	6.129e-06	48	0.0001265	22	Genes in module_363	www.broad.mit.e...
Broad module_151	View Gene Set	6.835e-06	297	0.0001349	23	Genes in module_151	www.broad.mit.e...
Broad module_16	View Gene Set	7.802e-06	495	0.0001476	24	Genes in module_16	www.broad.mit.e...
Broad module_114	View Gene Set	1.048e-05	314	0.0001904	25	Genes in module_114	www.broad.mit.e...
Broad module_567	View Gene Set	1.492e-05	90	0.0002605	26	Genes in module_567	www.broad.mit.e...
Broad module_2	View Gene Set	1.611e-05	373	0.000271	27	Genes in module_2	www.broad.mit.e...
Broad module_219	View Gene Set	3.316e-05	26	0.0005377	28	Genes in module_219	www.broad.mit.e...
Broad module_47	View Gene Set	3.449e-05	216	0.00054	29	Genes in module_47	www.broad.mit.e...
Broad module_1	View Gene Set	3.855e-05	355	0.0005833	30	Genes in module_1	www.broad.mit.e...
Broad module_223	View Gene Set	6.253e-05	140	0.0009158	31	Genes in module_223	www.broad.mit.e...
Broad module_57	View Gene Set	0.0001284	54	0.001821	32	Genes in module_57	www.broad.mit.e...
Broad module_293	View Gene Set	0.0001409	12	0.001938	33	Genes in module_293	www.broad.mit.e...
Broad module_5	View Gene Set	0.0001561	420	0.001969	34	Genes in module_5	www.broad.mit.e...
Broad module_83	View Gene Set	0.0001483	296	0.001969	34	Genes in module_83	www.broad.mit.e...
Broad module_524	View Gene Set	0.0001542	30	0.001969	34	Genes in module_524	www.broad.mit.e...
Broad module_254	View Gene Set	0.0001987	58	0.002438	37	Genes in module_254	www.broad.mit.e...
Broad module_525	View Gene Set	0.0002269	61	0.002711	38	Genes in module_525	www.broad.mit.e...
Broad module_152	View Gene Set	0.0002652	121	0.003088	39	Genes in module_152	www.broad.mit.e...
Broad module_337	View Gene Set	0.0002731	59	0.0031	40	Genes in module_337	www.broad.mit.e...
Broad module_312	View Gene Set	0.0003085	45	0.003416	41	Genes in module_312	www.broad.mit.e...
Broad module_21	View Gene Set	0.0003354	10	0.003625	42	Genes in module_21	www.broad.mit.e...
Broad module_392	View Gene Set	0.0003699	18	0.003905	43	Genes in module_392	www.broad.mit.e...
Broad module_323	View Gene Set	0.0004448	54	0.004589	44	Genes in module_323	www.broad.mit.e...
Broad module_72	View Gene Set	0.0004826	293	0.004869	45	Genes in module_72	www.broad.mit.e...
Broad module_239	View Gene Set	0.0005127	112	0.00506	46	Genes in module_239	www.broad.mit.e...
Broad module_102	View Gene Set	0.0005306	18	0.005105	47	Genes in module_102	www.broad.mit.e...
Broad module_261	View Gene Set	0.0005398	91	0.005105	47	Genes in module_261	www.broad.mit.e...
Broad module_144	View Gene Set	0.0006027	8	0.005584	49	Genes in module_144	www.broad.mit.e...
Broad module_6	View Gene Set	0.000697	403	0.006329	50	Genes in module_6	www.broad.mit.e...
Broad module_121	View Gene Set	0.0007153	98	0.006367	51	Genes in module_121	www.broad.mit.e...
Broad module_38	View Gene Set	0.0007322	453	0.006393	52	Genes in module_38	www.broad.mit.e...
Broad module_397	View Gene Set	0.0007497	114	0.006422	53	Genes in module_397	www.broad.mit.e...
Broad module_119	View Gene Set	0.0007693	135	0.006468	54	Genes in module_119	www.broad.mit.e...
Broad module_516	View Gene Set	0.000844	16	0.006967	55	Genes in module_516	www.broad.mit.e...
Broad module_53	View Gene Set	0.0008949	389	0.006978	56	Genes in module_53	www.broad.mit.e...
Broad module_179	View Gene Set	0.0008847	404	0.006978	56	Genes in module_179	www.broad.mit.e...
Broad module_182	View Gene Set	0.0008794	94	0.006978	56	Genes in module_182	www.broad.mit.e...
Broad module_197	View Gene Set	0.0009068	170	0.006978	56	Genes in module_197	www.broad.mit.e...
Broad module_444	View Gene Set	0.0009542	18	0.00722	60	Genes in module_444	www.broad.mit.e...
Broad module_35	View Gene Set	0.000988	16	0.007353	61	Genes in module_35	www.broad.mit.e...
Broad module_136	View Gene Set	0.001068	426	0.007508	62	Genes in module_136	www.broad.mit.e...
Broad module_317	View Gene Set	0.00103	377	0.007508	62	Genes in module_317	www.broad.mit.e...
Broad module_362	View Gene Set	0.001063	21	0.007508	62	Genes in module_362	www.broad.mit.e...
Broad module_378	View Gene Set	0.001075	372	0.007508	62	Genes in module_378	www.broad.mit.e...
Broad module_56	View Gene Set	0.001103	12	0.007585	66	Genes in module_56	www.broad.mit.e...
Broad module_568	View Gene Set	0.001191	70	0.00807	67	Genes in module_568	www.broad.mit.e...
Broad module_153	View Gene Set	0.001331	34	0.008884	68	Genes in module_153	www.broad.mit.e...
Broad module_419	View Gene Set	0.001359	34	0.008942	69	Genes in module_419	www.broad.mit.e...
Broad module_459	View Gene Set	0.001449	370	0.009397	70	Genes in module_459	www.broad.mit.e...
Broad module_358	View Gene Set	0.001633	72	0.01044	71	Genes in module_358	www.broad.mit.e...
Broad module_255	View Gene Set	0.001753	386	0.01105	72	Genes in module_255	www.broad.mit.e...
Broad module_177	View Gene Set	0.001885	101	0.01172	73	Genes in module_177	www.broad.mit.e...
Broad module_110	View Gene Set	0.002074	15	0.01273	74	Genes in module_110	www.broad.mit.e...
Broad module_356	View Gene Set	0.002236	141	0.01354	75	Genes in module_356	www.broad.mit.e...
Broad module_195	View Gene Set	0.002299	138	0.01373	76	Genes in module_195	www.broad.mit.e...
Broad module_532	View Gene Set	0.002541	346	0.01498	77	Genes in module_532	www.broad.mit.e...
Broad module_97	View Gene Set	0.003489	91	0.02031	78	Genes in module_97	www.broad.mit.e...
Broad module_178	View Gene Set	0.004295	17	0.02468	79	Genes in module_178	www.broad.mit.e...
Broad module_19	View Gene Set	0.004387	306	0.0249	80	Genes in module_19	www.broad.mit.e...
Broad module_14	View Gene Set	0.004478	15	0.0251	81	Genes in module_14	www.broad.mit.e...
Broad module_244	View Gene Set	0.004547	182	0.02518	82	Genes in module_244	www.broad.mit.e...
Broad module_69	View Gene Set	0.00465	458	0.02522	83	Genes in module_69	www.broad.mit.e...
Broad module_133	View Gene Set	0.004667	15	0.02522	83	Genes in module_133	www.broad.mit.e...
Broad module_143	View Gene Set	0.004903	14	0.02619	85	Genes in module_143	www.broad.mit.e...
Broad module_180	View Gene Set	0.005074	113	0.02678	86	Genes in module_180	www.broad.mit.e...
Broad module_31	View Gene Set	0.005453	7	0.02765	87	Genes in module_31	www.broad.mit.e...
Broad module_37	View Gene Set	0.005425	412	0.02765	87	Genes in module_37	www.broad.mit.e...
Broad module_412	View Gene Set	0.005307	13	0.02765	87	Genes in module_412	www.broad.mit.e...
Broad module_491	View Gene Set	0.005481	74	0.02765	87	Genes in module_491	www.broad.mit.e...
Broad module_414	View Gene Set	0.005706	17	0.02847	91	Genes in module_414	www.broad.mit.e...
Broad module_488	View Gene Set	0.006407	28	0.03162	92	Genes in module_488	www.broad.mit.e...
Broad module_399	View Gene Set	0.006892	50	0.03365	93	Genes in module_399	www.broad.mit.e...
Broad module_275	View Gene Set	0.007741	16	0.03739	94	Genes in module_275	www.broad.mit.e...
Broad module_183	View Gene Set	0.007865	52	0.03759	95	Genes in module_183	www.broad.mit.e...
Broad module_457	View Gene Set	0.009392	9	0.04442	96	Genes in module_457	www.broad.mit.e...
Broad module_160	View Gene Set	0.009524	15	0.04458	97	Genes in module_160	www.broad.mit.e...
Broad module_433	View Gene Set	0.009681	60	0.04485	98	Genes in module_433	www.broad.mit.e...
Broad module_576	View Gene Set	0.01007	104	0.04619	99	Genes in module_576	www.broad.mit.e...
Broad module_36	View Gene Set	0.01038	146	0.04712	100	Genes in module_36	www.broad.mit.e...
Broad module_503	View Gene Set	0.01086	106	0.04881	101	Genes in module_503	www.broad.mit.e...

Gene Set Collection: Broad.c5.BP

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Broad NUCLEOBASENUCLEOSIDENUCLEOTIDE_AND_NUCLEIC_ACID_METABOLIC_PROCESS	View Gene Set	6.317e-08	1197	5.212e-05	1	Genes annotated by the GO term GO:0006139. The chemical reactions and pathways involving nucleobases nucleosides nucleotides and nucleic acids.	www.broad.mit.e...
Broad BIOPOLYMER_METABOLIC_PROCESS	View Gene Set	1.332e-07	1623	5.493e-05	2	Genes annotated by the GO term GO:0043283. The chemical reactions and pathways involving biopolymers long repeating chains of monomers found in nature e.g. polysaccharides and proteins.	www.broad.mit.e...
Broad COFACTOR_METABOLIC_PROCESS	View Gene Set	8.35e-06	53	0.001651	3	Genes annotated by the GO term GO:0051186. The chemical reactions and pathways involving a cofactor a substance that is required for the activity of an enzyme or other protein. Cofactors may be inorganic such as the metal atoms zinc iron and copper in certain forms or organic in which case they are referred to as coenzymes. Cofactors may either be bound tightly to active sites or bind loosely with the substrate.	www.broad.mit.e...
Broad MITOTIC_CELL_CYCLE	View Gene Set	1.001e-05	148	0.001651	3	Genes annotated by the GO term GO:0000278. Progression through the phases of the mitotic cell cycle the most common eukaryotic cell cycle which canonically comprises four successive phases called G1 S G2 and M and includes replication of the genome and the subsequent segregation of chromosomes into daughter cells. In some variant cell cycles nuclear replication or nuclear division may not be followed by cell division or G1 and G2 phases may be absent.	www.broad.mit.e...
Broad CELL_CYCLE_GO_0007049	View Gene Set	9.241e-06	304	0.001651	3	Genes annotated by the GO term GO:0007049. The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division.	www.broad.mit.e...
Broad RESPONSE_TO_ENDOGENOUS_STIMULUS	View Gene Set	1.347e-05	197	0.001852	6	Genes annotated by the GO term GO:0009719. A change in state or activity of a cell or an organism (in terms of movement secretion enzyme production gene expression etc.) as a result of an endogenous stimulus.	www.broad.mit.e...
Broad CELL_CYCLE_PHASE	View Gene Set	1.763e-05	167	0.002078	7	Genes annotated by the GO term GO:0022403. A cell cycle process comprising the steps by which a cell progresses through one of the biochemical and morphological phases and events that occur during successive cell replication or nuclear replication events.	www.broad.mit.e...
Broad CELL_CYCLE_PROCESS	View Gene Set	2.229e-05	187	0.002299	8	Genes annotated by the GO term GO:0022402. A cellular process that is involved in the progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events.	www.broad.mit.e...
Broad DNA_METABOLIC_PROCESS	View Gene Set	4.012e-05	253	0.00331	9	Genes annotated by the GO term GO:0006259. The chemical reactions and pathways involving DNA deoxyribonucleic acid one of the two main types of nucleic acid consisting of a long unbranched macromolecule formed from one or more commonly two strands of linked deoxyribonucleotides.	www.broad.mit.e...
Broad ORGANELLE_ORGANIZATION_AND_BIOGENESIS	View Gene Set	3.977e-05	458	0.00331	9	Genes annotated by the GO term GO:0006996. A process that is carried out at the cellular level which results in the formation arrangement of constituent parts or disassembly of any organelle within a cell.	www.broad.mit.e...
Broad RNA_METABOLIC_PROCESS	View Gene Set	7.271e-05	801	0.005453	11	Genes annotated by the GO term GO:0016070. The chemical reactions and pathways involving RNA ribonucleic acid one of the two main type of nucleic acid consisting of a long unbranched macromolecule formed from ribonucleotides joined in 3' 5'-phosphodiester linkage.	www.broad.mit.e...
Broad RESPONSE_TO_DNA_DAMAGE_STIMULUS	View Gene Set	8.573e-05	159	0.005894	12	Genes annotated by the GO term GO:0006974. A change in state or activity of a cell or an organism (in terms of movement secretion enzyme production gene expression etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism.	www.broad.mit.e...
Broad COENZYME_METABOLIC_PROCESS	View Gene Set	0.00011	37	0.006983	13	Genes annotated by the GO term GO:0006732. The chemical reactions and pathways involving coenzymes any of various nonprotein organic cofactors that are required in addition to an enzyme and a substrate for an enzymatic reaction to proceed.	www.broad.mit.e...
Broad MITOCHONDRION_ORGANIZATION_AND_BIOGENESIS	View Gene Set	0.0001209	47	0.007124	14	Genes annotated by the GO term GO:0007005. A process that is carried out at the cellular level which results in the formation arrangement of constituent parts or disassembly of a mitochondrion; includes mitochondrial morphology and distribution and replication of the mitochondrial genome as well as synthesis of new mitochondrial components.	www.broad.mit.e...
Broad RIBONUCLEOPROTEIN_COMPLEX_BIOGENESIS_AND_ASSEMBLY	View Gene Set	0.0002041	74	0.0106	15	Genes annotated by the GO term GO:0022613. The cellular process by which a complex containing RNA and proteins is synthesized aggregates and bonds together.	www.broad.mit.e...
Broad PROTEIN_METABOLIC_PROCESS	View Gene Set	0.0002056	1198	0.0106	15	Genes annotated by the GO term GO:0019538. The chemical reactions and pathways involving a specific protein rather than of proteins in general. Includes protein modification.	www.broad.mit.e...
Broad INTERPHASE	View Gene Set	0.0002528	68	0.01227	17	Genes annotated by the GO term GO:0051325. Progression through interphase the stage of cell cycle between successive rounds of chromosome segregation. Canonically interphase is the stage of the cell cycle during which the biochemical and physiologic functions of the cell are performed and replication of chromatin occurs.	www.broad.mit.e...
Broad BASE_EXCISION_REPAIR	View Gene Set	0.0003438	16	0.01576	18	Genes annotated by the GO term GO:0006284. In base excision repair an altered base is removed by a DNA glycosylase enzyme followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase.	www.broad.mit.e...
Broad DNA_REPAIR	View Gene Set	0.0006108	123	0.02299	19	Genes annotated by the GO term GO:0006281. The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations chemical mutagens fungal and bacterial toxins etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal base excision repair nucleotide excision repair photoreactivation bypass double-strand break repair pathway and mismatch repair pathway.	www.broad.mit.e...
Broad NEGATIVE_REGULATION_OF_APOPTOSIS	View Gene Set	0.0006689	147	0.02299	19	Genes annotated by the GO term GO:0043066. Any process that stops prevents or reduces the frequency rate or extent of cell death by apoptosis.	www.broad.mit.e...
Broad REGULATION_OF_GENE_EXPRESSION	View Gene Set	0.0006282	660	0.02299	19	Genes annotated by the GO term GO:0010468. Any process that modulates the frequency rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form.	www.broad.mit.e...
Broad DNA_REPLICATION	View Gene Set	0.0005755	101	0.02299	19	Genes annotated by the GO term GO:0006260. The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA.	www.broad.mit.e...
Broad ANTI_APOPTOSIS	View Gene Set	0.0005938	115	0.02299	19	Genes annotated by the GO term GO:0006916. A process which directly inhibits any of the steps required for cell death by apoptosis.	www.broad.mit.e...
Broad NEGATIVE_REGULATION_OF_PROGRAMMED_CELL_DEATH	View Gene Set	0.0006545	148	0.02299	19	Genes annotated by the GO term GO:0043069. Any process that stops prevents or reduces the frequency rate or extent of programmed cell death cell death resulting from activation of endogenous cellular processes.	www.broad.mit.e...
Broad TRNA_METABOLIC_PROCESS	View Gene Set	0.000705	18	0.02327	25	Genes annotated by the GO term GO:0006399. The chemical reactions and pathways involving tRNA transfer RNA a class of relatively small RNA molecules responsible for mediating the insertion of amino acids into the sequence of nascent polypeptide chains during protein synthesis. Transfer RNA is characterized by the presence of many unusual minor bases the function of which has not been completely established.	www.broad.mit.e...
Broad PROGRAMMED_CELL_DEATH	View Gene Set	0.0008532	424	0.02482	26	Genes annotated by the GO term GO:0012501. Cell death resulting from activation of endogenous cellular processes.	www.broad.mit.e...
Broad CELLULAR_PROTEIN_METABOLIC_PROCESS	View Gene Set	0.0007899	1085	0.02482	26	Genes annotated by the GO term GO:0044267. The chemical reactions and pathways involving a specific protein rather than of proteins in general occurring at the level of an individual cell. Includes protein modification.	www.broad.mit.e...
Broad REGULATION_OF_NUCLEOBASENUCLEOSIDENUCLEOTIDE_AND_NUCLEIC_ACID_METABOLIC_PROCESS	View Gene Set	0.0008529	601	0.02482	26	Genes annotated by the GO term GO:0019219. Any process that modulates the frequency rate or extent of the chemical reactions and pathways involving nucleobases nucleosides nucleotides and nucleic acids.	www.broad.mit.e...
Broad APOPTOSIS_GO	View Gene Set	0.0008726	423	0.02482	26	Genes annotated by the GO term GO:0006915. A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface.	www.broad.mit.e...
Broad CELLULAR_MACROMOLECULE_METABOLIC_PROCESS	View Gene Set	0.001289	1099	0.03544	30	Genes annotated by the GO term GO:0044260. The chemical reactions and pathways involving macromolecules large molecules including proteins nucleic acids and carbohydrates as carried out by individual cells.	www.broad.mit.e...
Broad INTERPHASE_OF_MITOTIC_CELL_CYCLE	View Gene Set	0.001486	62	0.03808	31	Genes annotated by the GO term GO:0051329. Progression through interphase the stage of cell cycle between successive rounds of mitosis. Canonically interphase is the stage of the cell cycle during which the biochemical and physiologic functions of the cell are performed and replication of chromatin occurs.	www.broad.mit.e...
Broad REGULATION_OF_TRANSCRIPTION	View Gene Set	0.001523	555	0.03808	31	Genes annotated by the GO term GO:0045449. Any process that modulates the frequency rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA.	www.broad.mit.e...
Broad REGULATION_OF_CELL_CYCLE	View Gene Set	0.001485	176	0.03808	31	Genes annotated by the GO term GO:0051726. Any process that modulates the rate or extent of progression through the cell cycle.	www.broad.mit.e...
Broad RESPONSE_TO_HORMONE_STIMULUS	View Gene Set	0.001597	33	0.03875	34	Genes annotated by the GO term GO:0009725. A change in state or activity of a cell or an organism (in terms of movement secretion enzyme production gene expression etc.) as a result of a hormone stimulus.	www.broad.mit.e...
Broad REGULATION_OF_METABOLIC_PROCESS	View Gene Set	0.001669	779	0.03934	35	Genes annotated by the GO term GO:0019222. Any process that modulates the frequency rate or extent of the chemical reactions and pathways within a cell or an organism.	www.broad.mit.e...
Broad CELLULAR_COMPONENT_ASSEMBLY	View Gene Set	0.001853	288	0.04224	36	Genes annotated by the GO term GO:0022607. A cellular process that results in the assembly of a part of the cell.	www.broad.mit.e...
Broad M_PHASE_OF_MITOTIC_CELL_CYCLE	View Gene Set	0.001894	83	0.04224	36	Genes annotated by the GO term GO:0000087. Progression through M phase the part of the mitotic cell cycle during which mitosis takes place.	www.broad.mit.e...
Broad REGULATION_OF_CELLULAR_METABOLIC_PROCESS	View Gene Set	0.001976	767	0.04291	38	Genes annotated by the GO term GO:0031323. Any process that modulates the frequency rate or extent of the chemical reactions and pathways by which individual cells transform chemical substances.	www.broad.mit.e...
Broad CELL_DEVELOPMENT	View Gene Set	0.002077	568	0.04394	39	Genes annotated by the GO term GO:0048468. The process whose specific outcome is the progression of the cell over time from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate.	www.broad.mit.e...
Broad G2_M_TRANSITION_OF_MITOTIC_CELL_CYCLE	View Gene Set	0.002175	13	0.04486	40	Genes annotated by the GO term GO:0000086. Progression from G2 phase to M phase of the mitotic cell cycle.	www.broad.mit.e...

Gene Set Collection: Broad.c5.CC

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Broad CYTOPLASM	View Gene Set	1.433e-19	2054	3.34e-17	1	Genes annotated by the GO term GO:0005737. All of the contents of a cell excluding the plasma membrane and nucleus but including other subcellular structures.	www.broad.mit.e...
Broad INTRACELLULAR_ORGANELLE_PART	View Gene Set	4.169e-17	1144	4.857e-15	2	Genes annotated by the GO term GO:0044446. A constituent part of an intracellular organelle an organized structure of distinctive morphology and function occurring within the cell. Includes constituent parts of the nucleus mitochondria plastids vacuoles vesicles ribosomes and the cytoskeleton but excludes the plasma membrane.	www.broad.mit.e...
Broad ORGANELLE_PART	View Gene Set	6.913e-17	1149	5.369e-15	3	Genes annotated by the GO term GO:0044422. Any constituent part of an organelle an organized structure of distinctive morphology and function. Includes constituent parts of the nucleus mitochondria plastids vacuoles vesicles ribosomes and the cytoskeleton but excludes the plasma membrane.	www.broad.mit.e...
Broad MITOCHONDRION	View Gene Set	3.928e-15	335	2.288e-13	4	Genes annotated by the GO term GO:0005739. A semiautonomous self replicating organelle that occurs in varying numbers shapes and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.	www.broad.mit.e...
Broad NUCLEUS	View Gene Set	5.356e-15	1353	2.496e-13	5	Genes annotated by the GO term GO:0005634. A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells the nucleus contains all of the cell's chromosomes except the organellar chromosomes and is the site of RNA synthesis and processing. In some species or in specialized cell types RNA metabolism or DNA replication may be absent.	www.broad.mit.e...
Broad NUCLEAR_PART	View Gene Set	5.013e-14	543	1.947e-12	6	Genes annotated by the GO term GO:0044428. Any constituent part of the nucleus a membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated.	www.broad.mit.e...
Broad CYTOPLASMIC_PART	View Gene Set	1.358e-13	1350	4.519e-12	7	Genes annotated by the GO term GO:0044444. Any constituent part of the cytoplasm all of the contents of a cell excluding the plasma membrane and nucleus but including other subcellular structures.	www.broad.mit.e...
Broad NUCLEAR_LUMEN	View Gene Set	2.169e-08	365	6.316e-07	8	Genes annotated by the GO term GO:0031981. The volume enclosed by the nuclear inner membrane.	www.broad.mit.e...
Broad ORGANELLE_LUMEN	View Gene Set	2.769e-08	434	6.452e-07	9	Genes annotated by the GO term GO:0043233. The volume enclosed by the membranes of a particular organelle e.g. endoplasmic reticulum lumen or the space between the two lipid bilayers of a double membrane surrounding an organelle e.g. nuclear membrane lumen.	www.broad.mit.e...
Broad MEMBRANE_ENCLOSED_LUMEN	View Gene Set	2.769e-08	434	6.452e-07	9	Genes annotated by the GO term GO:0031974. The enclosed volume within a sealed membrane or between two sealed membranes.	www.broad.mit.e...
Broad MACROMOLECULAR_COMPLEX	View Gene Set	4.009e-07	914	8.491e-06	11	Genes annotated by the GO term GO:0032991. A stable assembly of two or more macromolecules i.e. proteins nucleic acids carbohydrates or lipids in which the constituent parts function together.	www.broad.mit.e...
Broad ENVELOPE	View Gene Set	1.939e-06	165	3.474e-05	12	Genes annotated by the GO term GO:0031975. A multilayered structure surrounding all or part of a cell; encompasses one or more lipid bilayers and may include a cell wall layer also includes the space between layers.	www.broad.mit.e...
Broad ORGANELLE_ENVELOPE	View Gene Set	1.939e-06	165	3.474e-05	12	Genes annotated by the GO term GO:0031967. A double membrane structure enclosing an organelle including two lipid bilayers and the region between them. In some cases an organelle envelope may have more than two membranes.	www.broad.mit.e...
Broad ORGANELLE_MEMBRANE	View Gene Set	2.866e-06	290	4.769e-05	14	Genes annotated by the GO term GO:0031090. The lipid bilayer surrounding an organelle.	www.broad.mit.e...
Broad NUCLEOLUS	View Gene Set	3.871e-06	116	6.014e-05	15	Genes annotated by the GO term GO:0005730. A small dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein is not bounded by a limiting membrane and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA the processing of this RNA into 5.8S 18S and 28S components of ribosomal RNA and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.	www.broad.mit.e...
Broad MITOCHONDRIAL_MEMBRANE	View Gene Set	4.678e-06	85	6.812e-05	16	Genes annotated by the GO term GO:0031966. Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope.	www.broad.mit.e...
Broad RIBONUCLEOPROTEIN_COMPLEX	View Gene Set	9.506e-06	129	0.0001303	17	Genes annotated by the GO term GO:0030529. A macromolecular complex containing both protein and RNA molecules.	www.broad.mit.e...
Broad MITOCHONDRIAL_ENVELOPE	View Gene Set	2.003e-05	95	0.0002593	18	Genes annotated by the GO term GO:0005740. The double lipid bilayer enclosing the mitochondrion and separating its contents from the cell cytoplasm; includes the intermembrane space.	www.broad.mit.e...
Broad MITOCHONDRIAL_PART	View Gene Set	2.218e-05	140	0.000272	19	Genes annotated by the GO term GO:0044429. Any constituent part of a mitochondrion a semiautonomous self replicating organelle that occurs in varying numbers shapes and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.	www.broad.mit.e...
Broad NON_MEMBRANE_BOUND_ORGANELLE	View Gene Set	4.495e-05	613	0.0004987	20	Genes annotated by the GO term GO:0043228. Organized structure of distinctive morphology and function not bounded by a lipid bilayer membrane. Includes ribosomes the cytoskeleton and chromosomes.	www.broad.mit.e...
Broad INTRACELLULAR_NON_MEMBRANE_BOUND_ORGANELLE	View Gene Set	4.495e-05	613	0.0004987	20	Genes annotated by the GO term GO:0043232. Organized structure of distinctive morphology and function not bounded by a lipid bilayer membrane and occurring within the cell. Includes ribosomes the cytoskeleton and chromosomes.	www.broad.mit.e...
Broad MITOCHONDRIAL_INNER_MEMBRANE	View Gene Set	5.095e-05	66	0.0005396	22	Genes annotated by the GO term GO:0005743. The inner i.e. lumen-facing lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae.	www.broad.mit.e...
Broad PROTEIN_COMPLEX	View Gene Set	8.693e-05	799	0.0008806	23	Genes annotated by the GO term GO:0043234. Any protein group composed of two or more subunits which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups such as nucleic acids metal ions or carbohydrate groups.	www.broad.mit.e...
Broad ORGANELLE_INNER_MEMBRANE	View Gene Set	0.0001137	74	0.001104	24	Genes annotated by the GO term GO:0019866. The inner i.e. lumen-facing lipid bilayer of an organelle envelope; usually highly selective to most ions and metabolites.	www.broad.mit.e...
Broad NUCLEOPLASM	View Gene Set	0.0001933	266	0.001802	25	Genes annotated by the GO term GO:0005654. That part of the nuclear content other than the chromosomes or the nucleolus.	www.broad.mit.e...
Broad NUCLEOLAR_PART	View Gene Set	0.0002498	16	0.002239	26	Genes annotated by the GO term GO:0044452. Any constituent part of a nucleolus a small dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein is not bounded by a limiting membrane and is not seen during mitosis.	www.broad.mit.e...
Broad SMALL_NUCLEAR_RIBONUCLEOPROTEIN_COMPLEX	View Gene Set	0.0002871	20	0.002478	27	Genes annotated by the GO term GO:0030532. A complex composed of RNA of the small nuclear RNA (snRNA) class and protein found in the nucleus of a eukaryotic cell. These are typically named after the snRNA(s) they contain e.g. U1 snRNP or U4/U6 snRNP. Many but not all of these complexes are involved in splicing of nuclear mRNAs.	www.broad.mit.e...
Broad SPLICEOSOME	View Gene Set	0.0005336	44	0.00444	28	Genes annotated by the GO term GO:0005681. A ribonucleoprotein complex containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron.	www.broad.mit.e...
Broad ENDOPLASMIC_RETICULUM	View Gene Set	0.001677	282	0.01347	29	Genes annotated by the GO term GO:0005783. The irregular network of unit membranes visible only by electron microscopy that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels which are often expanded into slitlike cavities called cisternae. The ER takes two forms rough (or granular) with ribosomes adhering to the outer surface and smooth (with no ribosomes attached).	www.broad.mit.e...
Broad MITOCHONDRIAL_MEMBRANE_PART	View Gene Set	0.002022	52	0.0157	30	Genes annotated by the GO term GO:0044455. Any constituent part of the mitochondrial membrane either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope.	www.broad.mit.e...
Broad ENDOMEMBRANE_SYSTEM	View Gene Set	0.002121	213	0.01594	31	Genes annotated by the GO term GO:0012505. A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum Golgi bodies vesicles cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles.	www.broad.mit.e...
Broad FOCAL_ADHESION	View Gene Set	0.002507	11	0.01825	32	Genes annotated by the GO term GO:0005925. Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments.	www.broad.mit.e...
Broad CHROMOSOME	View Gene Set	0.002618	122	0.01849	33	Genes annotated by the GO term GO:0005694. A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information.	www.broad.mit.e...
Broad NUCLEOPLASM_PART	View Gene Set	0.003732	202	0.02557	34	Genes annotated by the GO term GO:0044451. Any constituent part of the nucleoplasm that part of the nuclear content other than the chromosomes or the nucleolus.	www.broad.mit.e...
Broad CHROMOSOMAL_PART	View Gene Set	0.004016	95	0.02673	35	Genes annotated by the GO term GO:0044427. Any constituent part of a chromosome a structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information.	www.broad.mit.e...
Broad CHROMATIN	View Gene Set	0.004667	35	0.03021	36	Genes annotated by the GO term GO:0000785. The ordered and organized complex of DNA and protein that forms the chromosome.	www.broad.mit.e...
Broad MITOCHONDRIAL_OUTER_MEMBRANE	View Gene Set	0.005407	18	0.03405	37	Genes annotated by the GO term GO:0005741. The outer i.e. cytoplasm-facing lipid bilayer of the mitochondrial envelope.	www.broad.mit.e...
Broad NUCLEAR_ENVELOPE	View Gene Set	0.00666	71	0.04084	38	Genes annotated by the GO term GO:0005635. The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space a gap of width 20-40 nm (also called the perinuclear space).	www.broad.mit.e...

Gene Set Collection: PMID

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
PMID 11042152	View Gene Set	4.632e-13	315	1.161e-09	1	Cloning and functional analysis of cDNAs with open reading frames for 300 previously undefined genes expressed in CD34+ hematopoietic stem/progenitor cells.	www.ncbi.nlm.ni...
PMID 10810093	View Gene Set	2.388e-12	151	2.994e-09	2	Identification of novel human genes evolutionarily conserved in Caenorhabditis elegans by comparative proteomics.	www.ncbi.nlm.ni...
PMID 15635413	View Gene Set	1.265e-11	421	1.057e-08	3	Nucleolar proteome dynamics.	www.ncbi.nlm.ni...
PMID 16341674	View Gene Set	5.509e-11	392	3.453e-08	4	Transcriptome analysis of human gastric cancer.	www.ncbi.nlm.ni...
PMID 16130169	View Gene Set	5.742e-10	74	2.879e-07	5	Proteomics of human umbilical vein endothelial cells applied to etoposide-induced apoptosis.	www.ncbi.nlm.ni...
PMID 11790298	View Gene Set	1.133e-09	208	4.736e-07	6	Directed proteomic analysis of the human nucleolus.	www.ncbi.nlm.ni...
PMID 12706105	View Gene Set	5.483e-09	182	1.964e-06	7	Identification and characterization of over 100 mitochondrial ribosomal protein pseudogenes in the human genome.	www.ncbi.nlm.ni...
PMID 16964243	View Gene Set	1.673e-08	504	5.243e-06	8	A probability-based approach for high-throughput protein phosphorylation analysis and site localization.	www.ncbi.nlm.ni...
PMID 12429849	View Gene Set	2.102e-08	106	5.855e-06	9	Functional proteomic analysis of human nucleolus.	www.ncbi.nlm.ni...
PMID 15302935	View Gene Set	3.022e-08	773	7.575e-06	10	Large-scale characterization of HeLa cell nuclear phosphoproteins.	www.ncbi.nlm.ni...
PMID 18063578	View Gene Set	4.233e-08	31	9.648e-06	11	The layered structure of human mitochondrial DNA nucleoids.	www.ncbi.nlm.ni...
PMID 15231747	View Gene Set	4.91e-08	212	1.026e-05	12	A protein interaction framework for human mRNA degradation.	www.ncbi.nlm.ni...
PMID 16565220	View Gene Set	3.157e-07	210	6.089e-05	13	Phosphoproteome analysis of the human mitotic spindle.	www.ncbi.nlm.ni...
PMID 11543634	View Gene Set	8.903e-07	58	0.0001594	14	The human mitochondrial ribosomal protein genes: mapping of 54 genes to the chromosomes and implications for human disorders.	www.ncbi.nlm.ni...
PMID 12226669	View Gene Set	5.041e-06	108	0.0008425	15	Comprehensive proteomic analysis of the human spliceosome.	www.ncbi.nlm.ni...
PMID 11080476	View Gene Set	1.16e-05	87	0.001711	16	Acetylation of HIV-1 Tat by CBP/P300 increases transcription of integrated HIV-1 genome and enhances binding to core histones.	www.ncbi.nlm.ni...
PMID 17643375	View Gene Set	1.111e-05	391	0.001711	16	Systematic analysis of the protein interaction network for the human transcription machinery reveals the identity of the 7SK capping enzyme.	www.ncbi.nlm.ni...
PMID 15146197	View Gene Set	1.679e-05	693	0.002338	18	Transcriptome characterization elucidates signaling networks that control human ES cell growth and differentiation.	www.ncbi.nlm.ni...
PMID 11689053	View Gene Set	3.079e-05	70	0.004063	19	Enhancement of the p300 HAT activity by HIV-1 Tat on chromatin DNA.	www.ncbi.nlm.ni...
PMID 19738611	View Gene Set	3.821e-05	39	0.004789	20	Cell cycle genes and ovarian cancer susceptibility: a tagSNP analysis.	www.ncbi.nlm.ni...
PMID 12408966	View Gene Set	4.396e-05	76	0.005248	21	The human and mouse replication-dependent histone genes.	www.ncbi.nlm.ni...
PMID 9439656	View Gene Set	5.109e-05	55	0.005822	22	The human histone gene cluster at the D6S105 locus.	www.ncbi.nlm.ni...
PMID 11991638	View Gene Set	5.678e-05	74	0.006188	23	Purification and characterization of native spliceosomes suitable for three-dimensional structural analysis.	www.ncbi.nlm.ni...
PMID 15592455	View Gene Set	6.079e-05	317	0.00635	24	Immunoaffinity profiling of tyrosine phosphorylation in cancer cells.	www.ncbi.nlm.ni...
PMID 16713569	View Gene Set	9.403e-05	570	0.009429	25	A protein-protein interaction network for human inherited ataxias and disorders of Purkinje cell degeneration.	www.ncbi.nlm.ni...
PMID 19571811	View Gene Set	0.0001103	15	0.01036	26	Common polygenic variation contributes to risk of schizophrenia and bipolar disorder.	www.ncbi.nlm.ni...
PMID 9150948	View Gene Set	0.0001116	15	0.01036	26	A two-dimensional gel database of human colon carcinoma proteins.	www.ncbi.nlm.ni...
PMID 12665801	View Gene Set	0.0001257	261	0.01125	28	Exploring proteomes and analyzing protein processing by mass spectrometric identification of sorted N-terminal peptides.	www.ncbi.nlm.ni...
PMID 12031912	View Gene Set	0.0002013	11	0.0174	29	Overexpression of translocation-associated fusion genes of FGFRI MYC NPMI and DEK but absence of the translocations in acute myeloid leukemia. A microarray analysis.	www.ncbi.nlm.ni...
PMID 16730941	View Gene Set	0.0002424	55	0.01961	30	A systematic analysis of human CHMP protein interactions: additional MIT domain-containing proteins bind to multiple components of the human ESCRT III complex.	www.ncbi.nlm.ni...
PMID 17244347	View Gene Set	0.0002404	10	0.01961	30	Pathways and genes differentially expressed in the motor cortex of patients with sporadic amyotrophic lateral sclerosis.	www.ncbi.nlm.ni...
PMID 18830263	View Gene Set	0.000283	36	0.02217	32	Polymorphisms in DNA repair and one-carbon metabolism genes and overall survival in diffuse large B-cell lymphoma and follicular lymphoma.	www.ncbi.nlm.ni...
PMID 1602151	View Gene Set	0.0003248	99	0.02468	33	Treatment of Haemophilus aphrophilus endocarditis with ciprofloxacin.	www.ncbi.nlm.ni...
PMID 11829477	View Gene Set	0.0003523	13	0.02501	34	Interaction network of human aminoacyl-tRNA synthetases and subunits of elongation factor 1 complex.	www.ncbi.nlm.ni...
PMID 1286669	View Gene Set	0.0003592	28	0.02501	34	Human liver protein map: a reference database established by microsequencing and gel comparison.	www.ncbi.nlm.ni...
PMID 9566873	View Gene Set	0.0003467	74	0.02501	34	Transcriptional activation of the integrated chromatin-associated human immunodeficiency virus type 1 promoter.	www.ncbi.nlm.ni...
PMID 14657027	View Gene Set	0.0003784	74	0.02528	37	Regulation of HIV-1 gene expression by histone acetylation and factor recruitment at the LTR promoter.	www.ncbi.nlm.ni...
PMID 15324660	View Gene Set	0.0003832	242	0.02528	37	Proteomic functional and domain-based analysis of in vivo 14-3-3 binding proteins involved in cytoskeletal regulation and cellular organization.	www.ncbi.nlm.ni...
PMID 8619474	View Gene Set	0.0004844	534	0.03114	39	A "double adaptor" method for improved shotgun library construction.	www.ncbi.nlm.ni...
PMID 9110174	View Gene Set	0.0004991	528	0.03128	40	Large-scale concatenation cDNA sequencing.	www.ncbi.nlm.ni...
PMID 2286373	View Gene Set	0.0005325	12	0.03256	41	Human metallothionein genes: structure of the functional locus at 16q13.	www.ncbi.nlm.ni...
PMID 15952740	View Gene Set	0.0005752	58	0.03434	42	Protein profiling of human pancreatic islets by two-dimensional gel electrophoresis and mass spectrometry.	www.ncbi.nlm.ni...
PMID 16120388	View Gene Set	0.0005903	12	0.03442	43	Mitochondrial membrane permeabilization by HIV-1 Vpr.	www.ncbi.nlm.ni...
PMID 11279069	View Gene Set	0.0006423	15	0.0366	44	Structural compensation for the deficit of rRNA with proteins in the mammalian mitochondrial ribosome. Systematic analysis of protein components of the large ribosomal subunit from mammalian mitochondria.	www.ncbi.nlm.ni...
PMID 11279123	View Gene Set	0.0007252	31	0.03957	45	The small subunit of the mammalian mitochondrial ribosome. Identification of the full complement of ribosomal proteins present.	www.ncbi.nlm.ni...
PMID 16303743	View Gene Set	0.0007261	427	0.03957	45	Signal sequence and keyword trap in silico for selection of full-length human cDNAs encoding secretion or membrane proteins from oligo-capped cDNA libraries.	www.ncbi.nlm.ni...
PMID 14559993	View Gene Set	0.0007467	51	0.03983	47	Regulation of alternative splicing by SRrp86 and its interacting proteins.	www.ncbi.nlm.ni...
PMID 16236267	View Gene Set	0.0008089	77	0.04225	48	Proteomic analysis of SUMO4 substrates in HEK293 cells under serum starvation-induced stress.	www.ncbi.nlm.ni...
PMID 16368544	View Gene Set	0.0008431	13	0.04314	49	New insights into potential functions for the protein 4.1 superfamily of proteins in kidney epithelium.	www.ncbi.nlm.ni...
PMID 12539042	View Gene Set	0.0009124	45	0.04345	50	HIV-1 Tat reprograms immature dendritic cells to express chemoattractants for activated T cells and macrophages.	www.ncbi.nlm.ni...
PMID 15761153	View Gene Set	0.0009046	211	0.04345	50	High-throughput mapping of a dynamic signaling network in mammalian cells.	www.ncbi.nlm.ni...
PMID 8084338	View Gene Set	0.0008924	21	0.04345	50	HIV-1 gp41 binding proteins and antibodies to gp41 could inhibit enhancement of human Raji cell MHC class I and II expression by gp41.	www.ncbi.nlm.ni...
PMID 9119399	View Gene Set	0.0009185	35	0.04345	50	Human histone gene organization: nonregular arrangement within a large cluster.	www.ncbi.nlm.ni...
PMID 19209188	View Gene Set	0.001014	13	0.04709	54	Genetic association analysis of 13 nuclear-encoded mitochondrial candidate genes with type II diabetes mellitus: the DAMAGE study.	www.ncbi.nlm.ni...
PMID 11551941	View Gene Set	0.001081	26	0.04927	55	The large subunit of the mammalian mitochondrial ribosome. Analysis of the complement of ribosomal proteins present.	www.ncbi.nlm.ni...

Gene Set Collection: ChromosomalTiles5Mb

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: Prosite

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: ppi.BioGRID

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: ppi.anyDB

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: pathwayCommons.cell-map

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: pathwayCommons.nci-nature

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: pathwayCommons.reactome

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: miranda.targets

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null chr8_95-100Mb	View Gene Set	2.152e-05	26	0.02397	1	Genomic tile: chr8 ; 95000001-100000001 Mb	genome.ucsc.edu...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null PS00203	View Gene Set	3.812e-05	13	0.02802	1	METALLOTHIONEIN_VRT	expasy.org/pros...
Null PS00047	View Gene Set	0.0001864	14	0.04978	2	HISTONE_H4	expasy.org/pros...
Null PS50294	View Gene Set	0.0002032	245	0.04978	2	WD_REPEATS_REGION	expasy.org/pros...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null ppi.155871	View Gene Set	1.99e-07	236	0.0004571	1	Protein-protein-interaction for 155871	www.ncbi.nlm.ni...
Null ppi.MGMT	View Gene Set	2.409e-06	28	0.002767	2	Protein-protein-interaction for MGMT	www.ncbi.nlm.ni...
Null ppi.SRRM2	View Gene Set	4.438e-06	101	0.003398	3	Protein-protein-interaction for SRRM2	www.ncbi.nlm.ni...
Null ppi.ZNF638	View Gene Set	1.255e-05	11	0.007205	4	Protein-protein-interaction for ZNF638	www.ncbi.nlm.ni...
Null ppi.MYC	View Gene Set	4.56e-05	42	0.02095	5	Protein-protein-interaction for MYC	www.ncbi.nlm.ni...
Null ppi.MEPCE	View Gene Set	6.156e-05	147	0.02357	6	Protein-protein-interaction for MEPCE	www.ncbi.nlm.ni...
Null ppi.ATG4B	View Gene Set	7.833e-05	9	0.02495	7	Protein-protein-interaction for ATG4B	www.ncbi.nlm.ni...
Null ppi.NPM1	View Gene Set	8.691e-05	16	0.02495	7	Protein-protein-interaction for NPM1	www.ncbi.nlm.ni...
Null ppi.PCNA	View Gene Set	0.0002164	40	0.04971	9	Protein-protein-interaction for PCNA	www.ncbi.nlm.ni...
Null ppi.PIM1	View Gene Set	0.0002151	8	0.04971	9	Protein-protein-interaction for PIM1	www.ncbi.nlm.ni...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null ppi.155871	View Gene Set	1.57e-07	251	0.0005641	1	Protein-protein-interaction for 155871	www.ncbi.nlm.ni...
Null ppi.MGMT	View Gene Set	2.409e-06	28	0.004329	2	Protein-protein-interaction for MGMT	www.ncbi.nlm.ni...
Null ppi.SRRM2	View Gene Set	4.438e-06	101	0.005316	3	Protein-protein-interaction for SRRM2	www.ncbi.nlm.ni...
Null ppi.ZNF638	View Gene Set	1.255e-05	11	0.01127	4	Protein-protein-interaction for ZNF638	www.ncbi.nlm.ni...
Null ppi.KIT	View Gene Set	4.547e-05	24	0.03161	5	Protein-protein-interaction for KIT	www.ncbi.nlm.ni...
Null ppi.MYC	View Gene Set	5.453e-05	56	0.03161	5	Protein-protein-interaction for MYC	www.ncbi.nlm.ni...
Null ppi.MEPCE	View Gene Set	6.156e-05	147	0.03161	5	Protein-protein-interaction for MEPCE	www.ncbi.nlm.ni...
Null ppi.ATG4B	View Gene Set	7.833e-05	9	0.03519	8	Protein-protein-interaction for ATG4B	www.ncbi.nlm.ni...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null EGFR1	View Gene Set	0.001331	137	0.01331	1	CELL_MAP - EGFR1 gene set	www.pathwaycomm...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null Proteogylcan syndecan-mediated signaling events	View Gene Set	2.124e-07	875	3.95e-05	1	NCI_NATURE - Proteogylcan syndecan-mediated signaling events gene set	www.pathwaycomm...
Null C-MYC pathway	View Gene Set	4.551e-07	149	4.232e-05	2	NCI_NATURE - C-MYC pathway gene set	www.pathwaycomm...
Null ErbB1 downstream signaling	View Gene Set	2.634e-06	812	8.167e-05	3	NCI_NATURE - ErbB1 downstream signaling gene set	www.pathwaycomm...
Null EGF receptor (ErbB1) signaling pathway	View Gene Set	2.634e-06	812	8.167e-05	3	NCI_NATURE - EGF receptor (ErbB1) signaling pathway gene set	www.pathwaycomm...
Null Glypican pathway	View Gene Set	2.225e-06	937	8.167e-05	3	NCI_NATURE - Glypican pathway gene set	www.pathwaycomm...
Null Internalization of ErbB1	View Gene Set	2.634e-06	812	8.167e-05	3	NCI_NATURE - Internalization of ErbB1 gene set	www.pathwaycomm...
Null Glypican 1 network	View Gene Set	4.395e-06	796	9.357e-05	7	NCI_NATURE - Glypican 1 network gene set	www.pathwaycomm...
Null Validated targets of C-MYC transcriptional activation	View Gene Set	4.432e-06	80	9.357e-05	7	NCI_NATURE - Validated targets of C-MYC transcriptional activation gene set	www.pathwaycomm...
Null ErbB receptor signaling network	View Gene Set	4.527e-06	841	9.357e-05	7	NCI_NATURE - ErbB receptor signaling network gene set	www.pathwaycomm...
Null TRAIL signaling pathway	View Gene Set	4.166e-05	686	0.0007749	10	NCI_NATURE - TRAIL signaling pathway gene set	www.pathwaycomm...
Null Syndecan-1-mediated signaling events	View Gene Set	6.045e-05	688	0.001022	11	NCI_NATURE - Syndecan-1-mediated signaling events gene set	www.pathwaycomm...
Null Signaling events mediated by Hepatocyte Growth Factor Receptor (c-Met)	View Gene Set	8.479e-05	677	0.001314	12	NCI_NATURE - Signaling events mediated by Hepatocyte Growth Factor Receptor (c-Met) gene set	www.pathwaycomm...
Null p53 pathway	View Gene Set	0.0001087	190	0.001555	13	NCI_NATURE - p53 pathway gene set	www.pathwaycomm...
Null Class I PI3K signaling events	View Gene Set	0.0002517	632	0.003345	14	NCI_NATURE - Class I PI3K signaling events gene set	www.pathwaycomm...
Null Signaling events mediated by focal adhesion kinase	View Gene Set	0.000341	660	0.003965	15	NCI_NATURE - Signaling events mediated by focal adhesion kinase gene set	www.pathwaycomm...
Null Syndecan-4-mediated signaling events	View Gene Set	0.000327	212	0.003965	15	NCI_NATURE - Syndecan-4-mediated signaling events gene set	www.pathwaycomm...
Null Signaling mediated by p38-alpha and p38-beta	View Gene Set	0.0004071	50	0.004454	17	NCI_NATURE - Signaling mediated by p38-alpha and p38-beta gene set	www.pathwaycomm...
Null FOXM1 transcription factor network	View Gene Set	0.0006816	42	0.007044	18	NCI_NATURE - FOXM1 transcription factor network gene set	www.pathwaycomm...
Null TGF-beta receptor signaling	View Gene Set	0.001165	306	0.009418	19	NCI_NATURE - TGF-beta receptor signaling gene set	www.pathwaycomm...
Null Regulation of nuclear SMAD2/3 signaling	View Gene Set	0.001165	306	0.009418	19	NCI_NATURE - Regulation of nuclear SMAD2/3 signaling gene set	www.pathwaycomm...
Null Regulation of cytoplasmic and nuclear SMAD2/3 signaling	View Gene Set	0.001165	306	0.009418	19	NCI_NATURE - Regulation of cytoplasmic and nuclear SMAD2/3 signaling gene set	www.pathwaycomm...
Null Direct p53 effectors	View Gene Set	0.001051	139	0.009418	19	NCI_NATURE - Direct p53 effectors gene set	www.pathwaycomm...
Null ALK1 signaling events	View Gene Set	0.001078	322	0.009418	19	NCI_NATURE - ALK1 signaling events gene set	www.pathwaycomm...
Null ALK1 pathway	View Gene Set	0.001439	324	0.01116	24	NCI_NATURE - ALK1 pathway gene set	www.pathwaycomm...
Null TNF receptor signaling pathway	View Gene Set	0.001767	299	0.01264	25	NCI_NATURE - TNF receptor signaling pathway gene set	www.pathwaycomm...
Null Class I PI3K signaling events mediated by Akt	View Gene Set	0.001722	532	0.01264	25	NCI_NATURE - Class I PI3K signaling events mediated by Akt gene set	www.pathwaycomm...
Null IFN-gamma pathway	View Gene Set	0.002569	590	0.0177	27	NCI_NATURE - IFN-gamma pathway gene set	www.pathwaycomm...
Null Canonical Wnt signaling pathway	View Gene Set	0.002729	156	0.01813	28	NCI_NATURE - Canonical Wnt signaling pathway gene set	www.pathwaycomm...
Null E2F transcription factor network	View Gene Set	0.005584	73	0.03581	29	NCI_NATURE - E2F transcription factor network gene set	www.pathwaycomm...
Null Regulation of retinoblastoma protein	View Gene Set	0.006527	66	0.04047	30	NCI_NATURE - Regulation of retinoblastoma protein gene set	www.pathwaycomm...
Null Signaling events mediated by HDAC Class III	View Gene Set	0.008248	39	0.04079	31	NCI_NATURE - Signaling events mediated by HDAC Class III gene set	www.pathwaycomm...
Null RAC1 signaling pathway	View Gene Set	0.008332	194	0.04079	31	NCI_NATURE - RAC1 signaling pathway gene set	www.pathwaycomm...
Null Coregulation of Androgen receptor activity	View Gene Set	0.006968	61	0.04079	31	NCI_NATURE - Coregulation of Androgen receptor activity gene set	www.pathwaycomm...
Null CDC42 signaling events	View Gene Set	0.007678	219	0.04079	31	NCI_NATURE - CDC42 signaling events gene set	www.pathwaycomm...
Null IL1-mediated signaling events	View Gene Set	0.007456	234	0.04079	31	NCI_NATURE - IL1-mediated signaling events gene set	www.pathwaycomm...
Null Regulation of RAC1 activity	View Gene Set	0.008332	194	0.04079	31	NCI_NATURE - Regulation of RAC1 activity gene set	www.pathwaycomm...
Null Regulation of RhoA activity	View Gene Set	0.008332	194	0.04079	31	NCI_NATURE - Regulation of RhoA activity gene set	www.pathwaycomm...
Null RhoA signaling pathway	View Gene Set	0.008332	194	0.04079	31	NCI_NATURE - RhoA signaling pathway gene set	www.pathwaycomm...
Null Regulation of CDC42 activity	View Gene Set	0.009586	231	0.04572	39	NCI_NATURE - Regulation of CDC42 activity gene set	www.pathwaycomm...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null Deposition of New CENPA-containing Nucleosomes at the Centromere	View Gene Set	2.449e-06	35	0.0009118	1	REACTOME - Deposition of New CENPA-containing Nucleosomes at the Centromere gene set	www.pathwaycomm...
Null Nucleosome assembly	View Gene Set	2.449e-06	35	0.0009118	1	REACTOME - Nucleosome assembly gene set	www.pathwaycomm...
Null Cell Cycle Mitotic	View Gene Set	2.072e-06	312	0.0009118	1	REACTOME - Cell Cycle Mitotic gene set	www.pathwaycomm... Mitotic&format=...
Null Gene Expression	View Gene Set	3.932e-06	381	0.001098	4	REACTOME - Gene Expression gene set	www.pathwaycomm...
Null mRNA Splicing - Major Pathway	View Gene Set	8.161e-06	107	0.001519	5	REACTOME - mRNA Splicing - Major Pathway gene set	www.pathwaycomm...
Null mRNA Splicing	View Gene Set	8.161e-06	107	0.001519	5	REACTOME - mRNA Splicing gene set	www.pathwaycomm...
Null Processing of Capped Intron-Containing Pre-mRNA	View Gene Set	3.062e-05	138	0.004887	7	REACTOME - Processing of Capped Intron-Containing Pre-mRNA gene set	www.pathwaycomm...
Null RNA Polymerase I Chain Elongation	View Gene Set	4.358e-05	49	0.006085	8	REACTOME - RNA Polymerase I Chain Elongation gene set	www.pathwaycomm...
Null Formation and Maturation of mRNA Transcript	View Gene Set	5.156e-05	185	0.006399	9	REACTOME - Formation and Maturation of mRNA Transcript gene set	www.pathwaycomm...
Null mRNA Processing	View Gene Set	6.585e-05	158	0.006686	10	REACTOME - mRNA Processing gene set	www.pathwaycomm...
Null Transcription	View Gene Set	6.571e-05	178	0.006686	10	REACTOME - Transcription gene set	www.pathwaycomm...
Null Interferon gamma signaling	View Gene Set	9.411e-05	48	0.00876	12	REACTOME - Interferon gamma signaling gene set	www.pathwaycomm...
Null Chromosome Maintenance	View Gene Set	0.0001206	69	0.009986	13	REACTOME - Chromosome Maintenance gene set	www.pathwaycomm...
Null RNA Polymerase I Promoter Clearance	View Gene Set	0.000129	55	0.009986	13	REACTOME - RNA Polymerase I Promoter Clearance gene set	www.pathwaycomm...
Null Signaling by Robo receptor	View Gene Set	0.0001341	23	0.009986	13	REACTOME - Signaling by Robo receptor gene set	www.pathwaycomm...
Null RNA Polymerase I Promoter Opening	View Gene Set	0.00015	31	0.01047	16	REACTOME - RNA Polymerase I Promoter Opening gene set	www.pathwaycomm...
Null RNA Polymerase I Transcription	View Gene Set	0.00018	57	0.01183	17	REACTOME - RNA Polymerase I Transcription gene set	www.pathwaycomm...
Null Cell-extracellular matrix interactions	View Gene Set	0.0002054	16	0.01274	18	REACTOME - Cell-extracellular matrix interactions gene set	www.pathwaycomm...
Null Mitotic G1-G1/S phases	View Gene Set	0.0002687	113	0.0158	19	REACTOME - Mitotic G1-G1/S phases gene set	www.pathwaycomm...
Null RNA Polymerase I RNA Polymerase III and Mitochondrial Transcription	View Gene Set	0.0003284	93	0.01747	20	REACTOME - RNA Polymerase I RNA Polymerase III and Mitochondrial Transcription gene set	www.pathwaycomm... RNA Polymerase ... and Mitochondri...
Null Mitotic M-M/G1 phases	View Gene Set	0.000322	180	0.01747	20	REACTOME - Mitotic M-M/G1 phases gene set	www.pathwaycomm...
Null Purine metabolism	View Gene Set	0.0003711	24	0.01884	22	REACTOME - Purine metabolism gene set	www.pathwaycomm...
Null Mitochondrial tRNA aminoacylation	View Gene Set	0.0004579	21	0.02224	23	REACTOME - Mitochondrial tRNA aminoacylation gene set	www.pathwaycomm...
Null Interferon Signaling	View Gene Set	0.000506	86	0.02317	24	REACTOME - Interferon Signaling gene set	www.pathwaycomm...
Null G1/S Transition	View Gene Set	0.0005185	104	0.02317	24	REACTOME - G1/S Transition gene set	www.pathwaycomm...
Null DNA Replication	View Gene Set	0.0006165	200	0.02649	26	REACTOME - DNA Replication gene set	www.pathwaycomm...
Null HIV Infection	View Gene Set	0.0008804	194	0.03598	27	REACTOME - HIV Infection gene set	www.pathwaycomm...
Null Role of Abl in Robo-Slit signaling	View Gene Set	0.000902	9	0.03598	27	REACTOME - Role of Abl in Robo-Slit signaling gene set	www.pathwaycomm...
Null Metabolism of proteins	View Gene Set	0.001034	263	0.03983	29	REACTOME - Metabolism of proteins gene set	www.pathwaycomm...
Null Smooth Muscle Contraction	View Gene Set	0.001104	24	0.04111	30	REACTOME - Smooth Muscle Contraction gene set	www.pathwaycomm...
Null Purine salvage	View Gene Set	0.001144	7	0.04123	31	REACTOME - Purine salvage gene set	www.pathwaycomm...
Null Pyrimidine biosynthesis	View Gene Set	0.001184	6	0.04131	32	REACTOME - Pyrimidine biosynthesis gene set	www.pathwaycomm...
Null Metabolism of water-soluble vitamins and cofactors	View Gene Set	0.001344	47	0.04548	33	REACTOME - Metabolism of water-soluble vitamins and cofactors gene set	www.pathwaycomm...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null hsa-miR-548c-3p	View Gene Set	1.702e-07	3130	9.246e-05	1	microRNA targets for hsa-miR-548c-3p from miranda.targets	www.mirbase.org...
Null hsa-miR-561	View Gene Set	2.732e-07	2925	9.246e-05	1	microRNA targets for hsa-miR-561 from miranda.targets	www.mirbase.org...
Null hsa-miR-559	View Gene Set	6.624e-07	2900	0.0001495	3	microRNA targets for hsa-miR-559 from miranda.targets	www.mirbase.org...
Null hsa-miR-548n	View Gene Set	1.335e-06	3830	0.0002259	4	microRNA targets for hsa-miR-548n from miranda.targets	www.mirbase.org...
Null hsa-miR-548l	View Gene Set	2.471e-06	2599	0.0002788	5	microRNA targets for hsa-miR-548l from miranda.targets	www.mirbase.org...
Null hsa-miR-590-3p	View Gene Set	2.443e-06	3575	0.0002788	5	microRNA targets for hsa-miR-590-3p from miranda.targets	www.mirbase.org...
Null hsa-miR-548d-3p	View Gene Set	3.734e-06	2210	0.0003611	7	microRNA targets for hsa-miR-548d-3p from miranda.targets	www.mirbase.org...
Null hsa-miR-548d-5p	View Gene Set	4.728e-06	3270	0.0004001	8	microRNA targets for hsa-miR-548d-5p from miranda.targets	www.mirbase.org...
Null hsa-miR-548e	View Gene Set	7.303e-06	2325	0.0005493	9	microRNA targets for hsa-miR-548e from miranda.targets	www.mirbase.org...
Null hsa-miR-548i	View Gene Set	8.548e-06	2860	0.0005787	10	microRNA targets for hsa-miR-548i from miranda.targets	www.mirbase.org...
Null hsa-miR-200b	View Gene Set	2.74e-05	1789	0.001144	11	microRNA targets for hsa-miR-200b from miranda.targets	www.mirbase.org...
Null hsa-miR-200c	View Gene Set	2.577e-05	1794	0.001144	11	microRNA targets for hsa-miR-200c from miranda.targets	www.mirbase.org...
Null hsa-miR-429	View Gene Set	2.692e-05	1921	0.001144	11	microRNA targets for hsa-miR-429 from miranda.targets	www.mirbase.org...
Null hsa-miR-513a-3p	View Gene Set	3.042e-05	2711	0.001144	11	microRNA targets for hsa-miR-513a-3p from miranda.targets	www.mirbase.org...
Null hsa-miR-548a-5p	View Gene Set	2.224e-05	2983	0.001144	11	microRNA targets for hsa-miR-548a-5p from miranda.targets	www.mirbase.org...
Null hsa-miR-548b-5p	View Gene Set	2.157e-05	3175	0.001144	11	microRNA targets for hsa-miR-548b-5p from miranda.targets	www.mirbase.org...
Null hsa-miR-548c-5p	View Gene Set	2.921e-05	2909	0.001144	11	microRNA targets for hsa-miR-548c-5p from miranda.targets	www.mirbase.org...
Null hsa-miR-655	View Gene Set	2.365e-05	1858	0.001144	11	microRNA targets for hsa-miR-655 from miranda.targets	www.mirbase.org...
Null hsa-miR-548h	View Gene Set	4.161e-05	2539	0.001483	19	microRNA targets for hsa-miR-548h from miranda.targets	www.mirbase.org...
Null hsa-miR-548j	View Gene Set	4.959e-05	2652	0.001679	20	microRNA targets for hsa-miR-548j from miranda.targets	www.mirbase.org...
Null hsa-miR-548a-3p	View Gene Set	5.325e-05	2420	0.001717	21	microRNA targets for hsa-miR-548a-3p from miranda.targets	www.mirbase.org...
Null hsa-miR-1283	View Gene Set	6.295e-05	1960	0.001937	22	microRNA targets for hsa-miR-1283 from miranda.targets	www.mirbase.org...
Null hsa-miR-142-5p	View Gene Set	0.0001286	2312	0.003785	23	microRNA targets for hsa-miR-142-5p from miranda.targets	www.mirbase.org...
Null hsa-miR-577	View Gene Set	0.0001966	2745	0.005545	24	microRNA targets for hsa-miR-577 from miranda.targets	www.mirbase.org...
Null hsa-miR-1252	View Gene Set	0.0002121	3125	0.00572	25	microRNA targets for hsa-miR-1252 from miranda.targets	www.mirbase.org...
Null hsa-miR-421	View Gene Set	0.0002197	1629	0.00572	25	microRNA targets for hsa-miR-421 from miranda.targets	www.mirbase.org...
Null hsa-miR-582-5p	View Gene Set	0.0002559	1971	0.006416	27	microRNA targets for hsa-miR-582-5p from miranda.targets	www.mirbase.org...
Null hsa-miR-216b	View Gene Set	0.0003378	1416	0.008168	28	microRNA targets for hsa-miR-216b from miranda.targets	www.mirbase.org...
Null hsa-miR-548f	View Gene Set	0.0003921	2082	0.009153	29	microRNA targets for hsa-miR-548f from miranda.targets	www.mirbase.org...
Null hsa-miR-1264	View Gene Set	0.0004398	2008	0.009925	30	microRNA targets for hsa-miR-1264 from miranda.targets	www.mirbase.org...
Null hsa-miR-369-3p	View Gene Set	0.0007185	1454	0.01569	31	microRNA targets for hsa-miR-369-3p from miranda.targets	www.mirbase.org...
Null hsa-miR-605	View Gene Set	0.0007448	1295	0.01576	32	microRNA targets for hsa-miR-605 from miranda.targets	www.mirbase.org...
Null hsa-miR-506	View Gene Set	0.0009128	1386	0.01873	33	microRNA targets for hsa-miR-506 from miranda.targets	www.mirbase.org...
Null hsa-miR-380	View Gene Set	0.0009412	1449	0.01874	34	microRNA targets for hsa-miR-380 from miranda.targets	www.mirbase.org...
Null hsa-miR-1298	View Gene Set	0.001153	406	0.0223	35	microRNA targets for hsa-miR-1298 from miranda.targets	www.mirbase.org...
Null hsa-miR-186	View Gene Set	0.001221	2681	0.02296	36	microRNA targets for hsa-miR-186 from miranda.targets	www.mirbase.org...
Null hsa-miR-1259	View Gene Set	0.001299	1309	0.02312	37	microRNA targets for hsa-miR-1259 from miranda.targets	www.mirbase.org...
Null hsa-miR-1323	View Gene Set	0.001332	2071	0.02312	37	microRNA targets for hsa-miR-1323 from miranda.targets	www.mirbase.org...
Null hsa-miR-944	View Gene Set	0.001317	2438	0.02312	37	microRNA targets for hsa-miR-944 from miranda.targets	www.mirbase.org...
Null hsa-miR-28-3p	View Gene Set	0.001386	838	0.02345	40	microRNA targets for hsa-miR-28-3p from miranda.targets	www.mirbase.org...
Null hsa-miR-410	View Gene Set	0.001509	1101	0.02492	41	microRNA targets for hsa-miR-410 from miranda.targets	www.mirbase.org...
Null hsa-miR-377	View Gene Set	0.001674	1713	0.02636	42	microRNA targets for hsa-miR-377 from miranda.targets	www.mirbase.org...
Null hsa-miR-891b	View Gene Set	0.001645	1022	0.02636	42	microRNA targets for hsa-miR-891b from miranda.targets	www.mirbase.org...
Null hsa-miR-452	View Gene Set	0.001792	1919	0.02757	44	microRNA targets for hsa-miR-452 from miranda.targets	www.mirbase.org...
Null hsa-miR-340	View Gene Set	0.001858	2504	0.02796	45	microRNA targets for hsa-miR-340 from miranda.targets	www.mirbase.org...
Null hsa-miR-338-5p	View Gene Set	0.002038	1707	0.02935	46	microRNA targets for hsa-miR-338-5p from miranda.targets	www.mirbase.org...
Null hsa-miR-888	View Gene Set	0.002007	1379	0.02935	46	microRNA targets for hsa-miR-888 from miranda.targets	www.mirbase.org...
Null hsa-miR-522	View Gene Set	0.002099	1877	0.0296	48	microRNA targets for hsa-miR-522 from miranda.targets	www.mirbase.org...
Null hsa-miR-548g	View Gene Set	0.002185	2114	0.03019	49	microRNA targets for hsa-miR-548g from miranda.targets	www.mirbase.org...
Null hsa-miR-155	View Gene Set	0.002602	1331	0.03352	50	microRNA targets for hsa-miR-155 from miranda.targets	www.mirbase.org...
Null hsa-miR-320a	View Gene Set	0.002674	2080	0.03352	50	microRNA targets for hsa-miR-320a from miranda.targets	www.mirbase.org...
Null hsa-miR-320b	View Gene Set	0.002674	2080	0.03352	50	microRNA targets for hsa-miR-320b from miranda.targets	www.mirbase.org...
Null hsa-miR-320c	View Gene Set	0.002572	1860	0.03352	50	microRNA targets for hsa-miR-320c from miranda.targets	www.mirbase.org...
Null hsa-miR-495	View Gene Set	0.002616	1793	0.03352	50	microRNA targets for hsa-miR-495 from miranda.targets	www.mirbase.org...
Null hsa-miR-548k	View Gene Set	0.002875	1874	0.03475	55	microRNA targets for hsa-miR-548k from miranda.targets	www.mirbase.org...
Null hsa-miR-633	View Gene Set	0.002874	1452	0.03475	55	microRNA targets for hsa-miR-633 from miranda.targets	www.mirbase.org...
Null hsa-miR-181d	View Gene Set	0.003185	2212	0.03686	57	microRNA targets for hsa-miR-181d from miranda.targets	www.mirbase.org...
Null hsa-miR-496	View Gene Set	0.003143	1044	0.03686	57	microRNA targets for hsa-miR-496 from miranda.targets	www.mirbase.org...
Null hsa-miR-524-5p	View Gene Set	0.003213	2574	0.03686	57	microRNA targets for hsa-miR-524-5p from miranda.targets	www.mirbase.org...
Null hsa-miR-1179	View Gene Set	0.003268	1381	0.03687	60	microRNA targets for hsa-miR-1179 from miranda.targets	www.mirbase.org...
Null hsa-miR-302a	View Gene Set	0.003336	2054	0.03703	61	microRNA targets for hsa-miR-302a from miranda.targets	www.mirbase.org...
Null hsa-miR-1197	View Gene Set	0.00345	1210	0.03767	62	microRNA targets for hsa-miR-1197 from miranda.targets	www.mirbase.org...
Null hsa-miR-130a	View Gene Set	0.003756	1687	0.03862	63	microRNA targets for hsa-miR-130a from miranda.targets	www.mirbase.org...
Null hsa-miR-20a	View Gene Set	0.003665	2324	0.03862	63	microRNA targets for hsa-miR-20a from miranda.targets	www.mirbase.org...
Null hsa-miR-570	View Gene Set	0.003764	3124	0.03862	63	microRNA targets for hsa-miR-570 from miranda.targets	www.mirbase.org...
Null hsa-miR-802	View Gene Set	0.003765	1859	0.03862	63	microRNA targets for hsa-miR-802 from miranda.targets	www.mirbase.org...
Null hsa-miR-152	View Gene Set	0.004064	1451	0.03943	67	microRNA targets for hsa-miR-152 from miranda.targets	www.mirbase.org...
Null hsa-miR-302c	View Gene Set	0.00397	2046	0.03943	67	microRNA targets for hsa-miR-302c from miranda.targets	www.mirbase.org...
Null hsa-miR-381	View Gene Set	0.003947	1638	0.03943	67	microRNA targets for hsa-miR-381 from miranda.targets	www.mirbase.org...
Null hsa-miR-600	View Gene Set	0.004077	1431	0.03943	67	microRNA targets for hsa-miR-600 from miranda.targets	www.mirbase.org...
Null hsa-miR-302b	View Gene Set	0.004327	2091	0.04126	71	microRNA targets for hsa-miR-302b from miranda.targets	www.mirbase.org...
Null hsa-miR-513b	View Gene Set	0.0044	1603	0.04137	72	microRNA targets for hsa-miR-513b from miranda.targets	www.mirbase.org...
Null hsa-miR-425	View Gene Set	0.00456	821	0.04229	73	microRNA targets for hsa-miR-425 from miranda.targets	www.mirbase.org...
Null hsa-miR-106b	View Gene Set	0.004948	1804	0.04483	74	microRNA targets for hsa-miR-106b from miranda.targets	www.mirbase.org...
Null hsa-miR-212	View Gene Set	0.005013	1096	0.04483	74	microRNA targets for hsa-miR-212 from miranda.targets	www.mirbase.org...
Null hsa-miR-548o	View Gene Set	0.005033	2216	0.04483	74	microRNA targets for hsa-miR-548o from miranda.targets	www.mirbase.org...
Null hsa-miR-148a	View Gene Set	0.00522	1504	0.04561	77	microRNA targets for hsa-miR-148a from miranda.targets	www.mirbase.org...
Null hsa-miR-579	View Gene Set	0.005254	1840	0.04561	77	microRNA targets for hsa-miR-579 from miranda.targets	www.mirbase.org...
Null hsa-miR-548p	View Gene Set	0.005335	2743	0.04572	79	microRNA targets for hsa-miR-548p from miranda.targets	www.mirbase.org...
Null hsa-miR-144	View Gene Set	0.005463	1767	0.04577	80	microRNA targets for hsa-miR-144 from miranda.targets	www.mirbase.org...
Null hsa-miR-485-3p	View Gene Set	0.005477	1229	0.04577	80	microRNA targets for hsa-miR-485-3p from miranda.targets	www.mirbase.org...
Null hsa-miR-1289	View Gene Set	0.005738	1229	0.04681	82	microRNA targets for hsa-miR-1289 from miranda.targets	www.mirbase.org...
Null hsa-miR-376a	View Gene Set	0.00572	1199	0.04681	82	microRNA targets for hsa-miR-376a from miranda.targets	www.mirbase.org...
Null hsa-miR-183	View Gene Set	0.005959	1239	0.04803	84	microRNA targets for hsa-miR-183 from miranda.targets	www.mirbase.org...

Gene Set Collection: mirbase.targets

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: mirtarget2.targets

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null hsa-miR-320	View Gene Set	4.049e-05	771	0.01554	1	microRNA targets for hsa-miR-320 from mirbase.targets	www.mirbase.org...
Null hsa-miR-518c	View Gene Set	8.744e-05	921	0.01554	1	microRNA targets for hsa-miR-518c from mirbase.targets	www.mirbase.org...
Null hsa-miR-548d-3p	View Gene Set	5.337e-05	978	0.01554	1	microRNA targets for hsa-miR-548d-3p from mirbase.targets	www.mirbase.org...
Null hsa-miR-888*	View Gene Set	7.547e-05	572	0.01554	1	microRNA targets for hsa-miR-888* from mirbase.targets	www.mirbase.org...
Null hsa-let-7e*	View Gene Set	0.0002024	790	0.01602	5	microRNA targets for hsa-let-7e* from mirbase.targets	www.mirbase.org...
Null hsa-let-7i*	View Gene Set	0.0001747	760	0.01602	5	microRNA targets for hsa-let-7i* from mirbase.targets	www.mirbase.org...
Null hsa-miR-19a	View Gene Set	0.000164	803	0.01602	5	microRNA targets for hsa-miR-19a from mirbase.targets	www.mirbase.org...
Null hsa-miR-376a	View Gene Set	0.0001937	746	0.01602	5	microRNA targets for hsa-miR-376a from mirbase.targets	www.mirbase.org...
Null hsa-miR-493*	View Gene Set	0.0002254	522	0.01602	5	microRNA targets for hsa-miR-493* from mirbase.targets	www.mirbase.org...
Null hsa-miR-802	View Gene Set	0.0002084	683	0.01602	5	microRNA targets for hsa-miR-802 from mirbase.targets	www.mirbase.org...
Null hsa-let-7b*	View Gene Set	0.0004315	772	0.01701	11	microRNA targets for hsa-let-7b* from mirbase.targets	www.mirbase.org...
Null hsa-let-7d*	View Gene Set	0.0003935	781	0.01701	11	microRNA targets for hsa-let-7d* from mirbase.targets	www.mirbase.org...
Null hsa-miR-1	View Gene Set	0.0004504	659	0.01701	11	microRNA targets for hsa-miR-1 from mirbase.targets	www.mirbase.org...
Null hsa-miR-144	View Gene Set	0.0003392	796	0.01701	11	microRNA targets for hsa-miR-144 from mirbase.targets	www.mirbase.org...
Null hsa-miR-194	View Gene Set	0.0003353	731	0.01701	11	microRNA targets for hsa-miR-194 from mirbase.targets	www.mirbase.org...
Null hsa-miR-298	View Gene Set	0.0003485	716	0.01701	11	microRNA targets for hsa-miR-298 from mirbase.targets	www.mirbase.org...
Null hsa-miR-337-5p	View Gene Set	0.0004917	795	0.01701	11	microRNA targets for hsa-miR-337-5p from mirbase.targets	www.mirbase.org...
Null hsa-miR-518d-3p	View Gene Set	0.0004747	916	0.01701	11	microRNA targets for hsa-miR-518d-3p from mirbase.targets	www.mirbase.org...
Null hsa-miR-518f	View Gene Set	0.0004407	948	0.01701	11	microRNA targets for hsa-miR-518f from mirbase.targets	www.mirbase.org...
Null hsa-miR-549	View Gene Set	0.0004259	718	0.01701	11	microRNA targets for hsa-miR-549 from mirbase.targets	www.mirbase.org...
Null hsa-miR-891a	View Gene Set	0.0005023	767	0.01701	11	microRNA targets for hsa-miR-891a from mirbase.targets	www.mirbase.org...
Null hsa-miR-548c-3p	View Gene Set	0.0006128	863	0.01894	22	microRNA targets for hsa-miR-548c-3p from mirbase.targets	www.mirbase.org...
Null hsa-miR-891b	View Gene Set	0.0005941	755	0.01894	22	microRNA targets for hsa-miR-891b from mirbase.targets	www.mirbase.org...
Null hsa-miR-200c	View Gene Set	0.0007987	871	0.02184	24	microRNA targets for hsa-miR-200c from mirbase.targets	www.mirbase.org...
Null hsa-miR-454	View Gene Set	0.0007967	769	0.02184	24	microRNA targets for hsa-miR-454 from mirbase.targets	www.mirbase.org...
Null hsa-miR-495	View Gene Set	0.0007864	796	0.02184	24	microRNA targets for hsa-miR-495 from mirbase.targets	www.mirbase.org...
Null hsa-miR-518b	View Gene Set	0.0008991	883	0.02368	27	microRNA targets for hsa-miR-518b from mirbase.targets	www.mirbase.org...
Null hsa-miR-191	View Gene Set	0.001109	709	0.02815	28	microRNA targets for hsa-miR-191 from mirbase.targets	www.mirbase.org...
Null hsa-miR-200b	View Gene Set	0.001152	854	0.02824	29	microRNA targets for hsa-miR-200b from mirbase.targets	www.mirbase.org...
Null hsa-let-7f-2*	View Gene Set	0.001222	820	0.02896	30	microRNA targets for hsa-let-7f-2* from mirbase.targets	www.mirbase.org...
Null hsa-miR-124	View Gene Set	0.001377	793	0.03058	31	microRNA targets for hsa-miR-124 from mirbase.targets	www.mirbase.org...
Null hsa-miR-574-3p	View Gene Set	0.001354	803	0.03058	31	microRNA targets for hsa-miR-574-3p from mirbase.targets	www.mirbase.org...
Null hsa-miR-222	View Gene Set	0.001435	714	0.03091	33	microRNA targets for hsa-miR-222 from mirbase.targets	www.mirbase.org...
Null hsa-miR-561	View Gene Set	0.001514	651	0.03165	34	microRNA targets for hsa-miR-561 from mirbase.targets	www.mirbase.org...
Null hsa-let-7c*	View Gene Set	0.00177	755	0.03505	35	microRNA targets for hsa-let-7c* from mirbase.targets	www.mirbase.org...
Null hsa-miR-498	View Gene Set	0.001775	744	0.03505	35	microRNA targets for hsa-miR-498 from mirbase.targets	www.mirbase.org...
Null hsa-miR-548b-3p	View Gene Set	0.002036	970	0.03913	37	microRNA targets for hsa-miR-548b-3p from mirbase.targets	www.mirbase.org...
Null hsa-miR-616*	View Gene Set	0.00243	533	0.04547	38	microRNA targets for hsa-miR-616* from mirbase.targets	www.mirbase.org...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null hsa-miR-548d-3p	View Gene Set	9.443e-07	1107	0.0002711	1	microRNA targets for hsa-miR-548d-3p from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-590-3p	View Gene Set	9.803e-07	2046	0.0002711	1	microRNA targets for hsa-miR-590-3p from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-124	View Gene Set	6.119e-06	432	0.000564	3	microRNA targets for hsa-miR-124 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-520d-5p	View Gene Set	5.633e-06	826	0.000564	3	microRNA targets for hsa-miR-520d-5p from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-524-5p	View Gene Set	5.863e-06	862	0.000564	3	microRNA targets for hsa-miR-524-5p from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-548c-3p	View Gene Set	4.488e-06	1804	0.000564	3	microRNA targets for hsa-miR-548c-3p from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-570	View Gene Set	1.37e-05	983	0.001082	7	microRNA targets for hsa-miR-570 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-17	View Gene Set	4.808e-05	784	0.002954	8	microRNA targets for hsa-miR-17 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-548b-5p	View Gene Set	4.286e-05	1157	0.002954	8	microRNA targets for hsa-miR-548b-5p from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-186	View Gene Set	6.321e-05	1020	0.003178	10	microRNA targets for hsa-miR-186 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-93	View Gene Set	6.267e-05	775	0.003178	10	microRNA targets for hsa-miR-93 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-20b	View Gene Set	7.678e-05	795	0.003538	12	microRNA targets for hsa-miR-20b from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-519d	View Gene Set	9.978e-05	714	0.003941	13	microRNA targets for hsa-miR-519d from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-548d-5p	View Gene Set	9.654e-05	1147	0.003941	13	microRNA targets for hsa-miR-548d-5p from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-607	View Gene Set	0.0001079	1137	0.003979	15	microRNA targets for hsa-miR-607 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-548c-5p	View Gene Set	0.0001401	1151	0.004841	16	microRNA targets for hsa-miR-548c-5p from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-377	View Gene Set	0.0001642	449	0.005044	17	microRNA targets for hsa-miR-377 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-506	View Gene Set	0.0001585	439	0.005044	17	microRNA targets for hsa-miR-506 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-340	View Gene Set	0.0001789	874	0.005207	19	microRNA targets for hsa-miR-340 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-106b	View Gene Set	0.0002065	736	0.005699	20	microRNA targets for hsa-miR-106b from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-495	View Gene Set	0.0002267	1246	0.005699	20	microRNA targets for hsa-miR-495 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-559	View Gene Set	0.0002241	977	0.005699	20	microRNA targets for hsa-miR-559 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-20a	View Gene Set	0.0002534	754	0.006092	23	microRNA targets for hsa-miR-20a from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-548a-5p	View Gene Set	0.0003702	1120	0.007873	24	microRNA targets for hsa-miR-548a-5p from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-590-5p	View Gene Set	0.0003623	275	0.007873	24	microRNA targets for hsa-miR-590-5p from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-802	View Gene Set	0.0003521	428	0.007873	24	microRNA targets for hsa-miR-802 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-106a	View Gene Set	0.0005027	781	0.009942	27	microRNA targets for hsa-miR-106a from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-603	View Gene Set	0.0005034	446	0.009942	27	microRNA targets for hsa-miR-603 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-888	View Gene Set	0.0005621	450	0.01072	29	microRNA targets for hsa-miR-888 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-21	View Gene Set	0.0006427	312	0.01185	30	microRNA targets for hsa-miR-21 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-483-3p	View Gene Set	0.0007345	124	0.0131	31	microRNA targets for hsa-miR-483-3p from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-320	View Gene Set	0.0007935	550	0.01371	32	microRNA targets for hsa-miR-320 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-515-5p	View Gene Set	0.0008616	396	0.01401	33	microRNA targets for hsa-miR-515-5p from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-561	View Gene Set	0.0008527	1193	0.01401	33	microRNA targets for hsa-miR-561 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-374a	View Gene Set	0.0009023	894	0.01426	35	microRNA targets for hsa-miR-374a from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-200c	View Gene Set	0.0009335	668	0.01434	36	microRNA targets for hsa-miR-200c from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-34b	View Gene Set	0.001312	350	0.01821	37	microRNA targets for hsa-miR-34b from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-454	View Gene Set	0.00135	442	0.01821	37	microRNA targets for hsa-miR-454 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-549	View Gene Set	0.001328	200	0.01821	37	microRNA targets for hsa-miR-549 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-595	View Gene Set	0.001338	245	0.01821	37	microRNA targets for hsa-miR-595 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-935	View Gene Set	0.001319	283	0.01821	37	microRNA targets for hsa-miR-935 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-15a	View Gene Set	0.001421	567	0.01871	42	microRNA targets for hsa-miR-15a from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-374b	View Gene Set	0.001575	902	0.01979	43	microRNA targets for hsa-miR-374b from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-641	View Gene Set	0.001571	659	0.01979	43	microRNA targets for hsa-miR-641 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-142-5p	View Gene Set	0.001828	727	0.02246	45	microRNA targets for hsa-miR-142-5p from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-429	View Gene Set	0.001946	640	0.02339	46	microRNA targets for hsa-miR-429 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-505	View Gene Set	0.002008	240	0.02363	47	microRNA targets for hsa-miR-505 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-200b	View Gene Set	0.002491	671	0.02799	48	microRNA targets for hsa-miR-200b from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-384	View Gene Set	0.002496	251	0.02799	48	microRNA targets for hsa-miR-384 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-9	View Gene Set	0.002531	423	0.02799	48	microRNA targets for hsa-miR-9 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-548a-3p	View Gene Set	0.00298	900	0.03231	51	microRNA targets for hsa-miR-548a-3p from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-448	View Gene Set	0.003094	500	0.0329	52	microRNA targets for hsa-miR-448 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-605	View Gene Set	0.003387	294	0.03534	53	microRNA targets for hsa-miR-605 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-140-3p	View Gene Set	0.003891	246	0.03806	54	microRNA targets for hsa-miR-140-3p from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-15b	View Gene Set	0.0038	575	0.03806	54	microRNA targets for hsa-miR-15b from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-23a	View Gene Set	0.003999	858	0.03806	54	microRNA targets for hsa-miR-23a from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-299-5p	View Gene Set	0.003872	163	0.03806	54	microRNA targets for hsa-miR-299-5p from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-556-3p	View Gene Set	0.004061	245	0.03806	54	microRNA targets for hsa-miR-556-3p from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-636	View Gene Set	0.003936	149	0.03806	54	microRNA targets for hsa-miR-636 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-195	View Gene Set	0.004443	491	0.04095	60	microRNA targets for hsa-miR-195 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-330-3p	View Gene Set	0.004706	682	0.04146	61	microRNA targets for hsa-miR-330-3p from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-497	View Gene Set	0.004723	668	0.04146	61	microRNA targets for hsa-miR-497 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-548b-3p	View Gene Set	0.004687	264	0.04146	61	microRNA targets for hsa-miR-548b-3p from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-542-3p	View Gene Set	0.005094	169	0.04402	64	microRNA targets for hsa-miR-542-3p from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-205	View Gene Set	0.005205	348	0.04428	65	microRNA targets for hsa-miR-205 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-138	View Gene Set	0.005379	183	0.0449	66	microRNA targets for hsa-miR-138 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-23b	View Gene Set	0.00544	875	0.0449	66	microRNA targets for hsa-miR-23b from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-365	View Gene Set	0.005522	156	0.04491	68	microRNA targets for hsa-miR-365 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-582-5p	View Gene Set	0.005656	526	0.04496	69	microRNA targets for hsa-miR-582-5p from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-634	View Gene Set	0.005691	215	0.04496	69	microRNA targets for hsa-miR-634 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-944	View Gene Set	0.005899	1362	0.04594	71	microRNA targets for hsa-miR-944 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-494	View Gene Set	0.006134	696	0.04711	72	microRNA targets for hsa-miR-494 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-135a	View Gene Set	0.006343	301	0.0474	73	microRNA targets for hsa-miR-135a from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-338-5p	View Gene Set	0.006317	948	0.0474	73	microRNA targets for hsa-miR-338-5p from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-135b	View Gene Set	0.006594	296	0.04862	75	microRNA targets for hsa-miR-135b from mirtarget2.targets	www.mirbase.org...

Gene Set Collection: pictar.targets

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: tarbase.targets

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: targetscan.targets

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: miRNAtargetUnion

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null hsa-miR-320	View Gene Set	2.985e-05	405	0.005314	1	microRNA targets for hsa-miR-320 from pictar.targets	www.mirbase.org...
Null hsa-miR-1	View Gene Set	0.001203	408	0.03651	2	microRNA targets for hsa-miR-1 from pictar.targets	www.mirbase.org...
Null hsa-miR-133a	View Gene Set	0.00138	324	0.03651	2	microRNA targets for hsa-miR-133a from pictar.targets	www.mirbase.org...
Null hsa-miR-133b	View Gene Set	0.002277	337	0.03651	2	microRNA targets for hsa-miR-133b from pictar.targets	www.mirbase.org...
Null hsa-miR-142-3p	View Gene Set	0.001157	166	0.03651	2	microRNA targets for hsa-miR-142-3p from pictar.targets	www.mirbase.org...
Null hsa-miR-148a	View Gene Set	0.00256	342	0.03651	2	microRNA targets for hsa-miR-148a from pictar.targets	www.mirbase.org...
Null hsa-miR-148b	View Gene Set	0.002188	341	0.03651	2	microRNA targets for hsa-miR-148b from pictar.targets	www.mirbase.org...
Null hsa-miR-193a	View Gene Set	0.002666	168	0.03651	2	microRNA targets for hsa-miR-193a from pictar.targets	www.mirbase.org...
Null hsa-miR-206	View Gene Set	0.002148	404	0.03651	2	microRNA targets for hsa-miR-206 from pictar.targets	www.mirbase.org...
Null hsa-miR-26a	View Gene Set	0.001066	501	0.03651	2	microRNA targets for hsa-miR-26a from pictar.targets	www.mirbase.org...
Null hsa-miR-26b	View Gene Set	0.001477	508	0.03651	2	microRNA targets for hsa-miR-26b from pictar.targets	www.mirbase.org...
Null hsa-miR-372	View Gene Set	0.002069	608	0.03651	2	microRNA targets for hsa-miR-372 from pictar.targets	www.mirbase.org...
Null hsa-miR-9*	View Gene Set	0.001526	306	0.03651	2	microRNA targets for hsa-miR-9* from pictar.targets	www.mirbase.org...
Null hsa-miR-152	View Gene Set	0.004093	344	0.04553	14	microRNA targets for hsa-miR-152 from pictar.targets	www.mirbase.org...
Null hsa-miR-9	View Gene Set	0.003899	670	0.04553	14	microRNA targets for hsa-miR-9 from pictar.targets	www.mirbase.org...
Null hsa-miR-93	View Gene Set	0.003851	606	0.04553	14	microRNA targets for hsa-miR-93 from pictar.targets	www.mirbase.org...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null hsa-miR-1	View Gene Set	3.857e-07	149	1.967e-05	1	microRNA targets for hsa-miR-1 from tarbase.targets	www.mirbase.org...
Null hsa-let-7b	View Gene Set	5.226e-05	83	0.001333	2	microRNA targets for hsa-let-7b from tarbase.targets	www.mirbase.org...
Null hsa-miR-373	View Gene Set	8.421e-05	40	0.001432	3	microRNA targets for hsa-miR-373 from tarbase.targets	www.mirbase.org...
Null hsa-miR-155	View Gene Set	0.0001468	95	0.001871	4	microRNA targets for hsa-miR-155 from tarbase.targets	www.mirbase.org...
Null hsa-miR-124	View Gene Set	0.001005	133	0.01025	5	microRNA targets for hsa-miR-124 from tarbase.targets	www.mirbase.org...
Null hsa-miR-30	View Gene Set	0.006397	83	0.04661	6	microRNA targets for hsa-miR-30 from tarbase.targets	www.mirbase.org...
Null hsa-miR-30a-3p	View Gene Set	0.005708	7	0.04661	6	microRNA targets for hsa-miR-30a-3p from tarbase.targets	www.mirbase.org...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null hsa-miR-1	View Gene Set	2.952e-05	583	0.001452	1	microRNA targets for hsa-miR-1 from targetscan.targets	www.mirbase.org...
Null hsa-miR-124	View Gene Set	2.976e-05	1299	0.001452	1	microRNA targets for hsa-miR-124 from targetscan.targets	www.mirbase.org...
Null hsa-miR-206	View Gene Set	2.952e-05	583	0.001452	1	microRNA targets for hsa-miR-206 from targetscan.targets	www.mirbase.org...
Null hsa-miR-506	View Gene Set	2.976e-05	1299	0.001452	1	microRNA targets for hsa-miR-506 from targetscan.targets	www.mirbase.org...
Null hsa-miR-613	View Gene Set	2.952e-05	583	0.001452	1	microRNA targets for hsa-miR-613 from targetscan.targets	www.mirbase.org...
Null hsa-miR-193a-3p	View Gene Set	0.0001416	142	0.004937	6	microRNA targets for hsa-miR-193a-3p from targetscan.targets	www.mirbase.org...
Null hsa-miR-193b	View Gene Set	0.0001416	142	0.004937	6	microRNA targets for hsa-miR-193b from targetscan.targets	www.mirbase.org...
Null hsa-miR-142-3p	View Gene Set	0.0004163	250	0.008715	8	microRNA targets for hsa-miR-142-3p from targetscan.targets	www.mirbase.org...
Null hsa-miR-205	View Gene Set	0.0004117	288	0.008715	8	microRNA targets for hsa-miR-205 from targetscan.targets	www.mirbase.org...
Null hsa-miR-30a	View Gene Set	0.0005	1080	0.008715	8	microRNA targets for hsa-miR-30a from targetscan.targets	www.mirbase.org...
Null hsa-miR-30b	View Gene Set	0.0005	1080	0.008715	8	microRNA targets for hsa-miR-30b from targetscan.targets	www.mirbase.org...
Null hsa-miR-30c	View Gene Set	0.0005	1080	0.008715	8	microRNA targets for hsa-miR-30c from targetscan.targets	www.mirbase.org...
Null hsa-miR-30d	View Gene Set	0.0005	1080	0.008715	8	microRNA targets for hsa-miR-30d from targetscan.targets	www.mirbase.org...
Null hsa-miR-30e	View Gene Set	0.0005	1080	0.008715	8	microRNA targets for hsa-miR-30e from targetscan.targets	www.mirbase.org...
Null hsa-miR-9	View Gene Set	0.0008087	936	0.01316	15	microRNA targets for hsa-miR-9 from targetscan.targets	www.mirbase.org...
Null hsa-miR-340	View Gene Set	0.001849	963	0.0282	16	microRNA targets for hsa-miR-340 from targetscan.targets	www.mirbase.org...
Null hsa-miR-451	View Gene Set	0.003252	14	0.04667	17	microRNA targets for hsa-miR-451 from targetscan.targets	www.mirbase.org...
Null hsa-miR-133a	View Gene Set	0.003767	502	0.04838	18	microRNA targets for hsa-miR-133a from targetscan.targets	www.mirbase.org...
Null hsa-miR-133b	View Gene Set	0.003767	502	0.04838	18	microRNA targets for hsa-miR-133b from targetscan.targets	www.mirbase.org...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-548c-3p	View Gene Set	2.159e-10	4092	4.995e-07	1	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-548c-3p from miRNAtargetUnion	www.mirbase.org...
Null mirbase.tarbase.targetscan.targetsUnion.hsa-miR-1	View Gene Set	2.024e-09	1233	2.342e-06	2	microRNA targets for mirbase.tarbase.targetscan.targetsUnion.hsa-miR-1 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-548d-3p	View Gene Set	5.092e-09	3139	2.945e-06	3	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-548d-3p from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-320	View Gene Set	4.754e-09	1474	2.945e-06	3	microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-320 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-561	View Gene Set	1.106e-08	3650	5.12e-06	5	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-561 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-590-3p	View Gene Set	4.538e-08	4554	1.167e-05	6	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-590-3p from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-590-3p	View Gene Set	4.204e-08	4420	1.167e-05	6	microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-590-3p from miRNAtargetUnion	www.mirbase.org...
Null mirtarget2.tarbase.targetscan.targetsUnion.hsa-miR-1	View Gene Set	3.664e-08	832	1.167e-05	6	microRNA targets for mirtarget2.tarbase.targetscan.targetsUnion.hsa-miR-1 from miRNAtargetUnion	www.mirbase.org...
Null pictar.tarbase.targetscan.targetsUnion.hsa-miR-1	View Gene Set	3.053e-08	783	1.167e-05	6	microRNA targets for pictar.tarbase.targetscan.targetsUnion.hsa-miR-1 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-559	View Gene Set	6.499e-08	3456	1.504e-05	10	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-559 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.tarbase.targetsUnion.hsa-miR-1	View Gene Set	1.701e-07	1008	3.579e-05	11	microRNA targets for mirbase.mirtarget2.tarbase.targetsUnion.hsa-miR-1 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.pictar.targetscan.targetsUnion.hsa-miR-1	View Gene Set	1.964e-07	1256	3.788e-05	12	microRNA targets for mirbase.pictar.targetscan.targetsUnion.hsa-miR-1 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-429	View Gene Set	2.39e-07	2506	4.1e-05	13	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-429 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-1	View Gene Set	2.481e-07	1281	4.1e-05	13	microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-1 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-200c	View Gene Set	4.552e-07	2480	7.023e-05	15	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-200c from miRNAtargetUnion	www.mirbase.org...
Null mirbase.pictar.tarbase.targetsUnion.hsa-miR-1	View Gene Set	6.046e-07	1078	8.744e-05	16	microRNA targets for mirbase.pictar.tarbase.targetsUnion.hsa-miR-1 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-548b-5p	View Gene Set	6.822e-07	3963	9.286e-05	17	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-548b-5p from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.tarbase.targetsUnion.hsa-miR-124	View Gene Set	9.67e-07	1174	0.0001243	18	microRNA targets for mirbase.mirtarget2.tarbase.targetsUnion.hsa-miR-124 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-200b	View Gene Set	1.184e-06	2444	0.0001442	19	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-200b from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-548d-5p	View Gene Set	1.464e-06	4039	0.0001693	20	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-548d-5p from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.tarbase.targetsUnion.hsa-miR-200c	View Gene Set	1.77e-06	2316	0.0001862	21	microRNA targets for miranda.mirbase.tarbase.targetsUnion.hsa-miR-200c from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-590-3p	View Gene Set	1.757e-06	4159	0.0001862	21	microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-590-3p from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.tarbase.targetsUnion.hsa-miR-200c	View Gene Set	2.795e-06	2013	0.0002812	23	microRNA targets for miranda.mirtarget2.tarbase.targetsUnion.hsa-miR-200c from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-200c	View Gene Set	3.883e-06	2410	0.0003744	24	microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-200c from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-548a-5p	View Gene Set	4.621e-06	3746	0.0004277	25	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-548a-5p from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-548c-5p	View Gene Set	5.276e-06	3706	0.000436	26	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-548c-5p from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-200c	View Gene Set	5.156e-06	2095	0.000436	26	microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-200c from miRNAtargetUnion	www.mirbase.org...
Null mirbase.tarbase.targetscan.targetsUnion.hsa-miR-124	View Gene Set	4.934e-06	1909	0.000436	26	microRNA targets for mirbase.tarbase.targetscan.targetsUnion.hsa-miR-124 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-200b	View Gene Set	5.696e-06	2373	0.0004471	29	microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-200b from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-340	View Gene Set	5.797e-06	1956	0.0004471	29	microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-340 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-200b	View Gene Set	6.086e-06	2083	0.0004543	31	microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-200b from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-655	View Gene Set	6.872e-06	2490	0.0004969	32	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-655 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-142-5p	View Gene Set	8.238e-06	2649	0.0005154	33	microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-142-5p from miRNAtargetUnion	www.mirbase.org...
Null miranda.tarbase.targetscan.targetsUnion.hsa-miR-1	View Gene Set	8.236e-06	2072	0.0005154	33	microRNA targets for miranda.tarbase.targetscan.targetsUnion.hsa-miR-1 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-495	View Gene Set	8.001e-06	2114	0.0005154	33	microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-495 from miRNAtargetUnion	www.mirbase.org...
Null mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-1	View Gene Set	8.241e-06	860	0.0005154	33	microRNA targets for mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-1 from miRNAtargetUnion	www.mirbase.org...
Null pictar.tarbase.targetscan.targetsUnion.hsa-miR-206	View Gene Set	8.205e-06	702	0.0005154	33	microRNA targets for pictar.tarbase.targetscan.targetsUnion.hsa-miR-206 from miRNAtargetUnion	www.mirbase.org...
Null mirtarget2.tarbase.targetscan.targetsUnion.hsa-miR-206	View Gene Set	8.545e-06	768	0.0005203	38	microRNA targets for mirtarget2.tarbase.targetscan.targetsUnion.hsa-miR-206 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-548a-3p	View Gene Set	9.371e-06	3211	0.0005467	39	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-548a-3p from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-495	View Gene Set	9.45e-06	2495	0.0005467	39	microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-495 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-340	View Gene Set	9.942e-06	3195	0.0005478	41	microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-340 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-495	View Gene Set	9.841e-06	2518	0.0005478	41	microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-495 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-206	View Gene Set	1.036e-05	1315	0.0005577	43	microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-206 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-582-5p	View Gene Set	1.112e-05	2568	0.0005849	44	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-582-5p from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-590-3p	View Gene Set	1.151e-05	2774	0.0005916	45	microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-590-3p from miRNAtargetUnion	www.mirbase.org...
Null mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-340	View Gene Set	1.182e-05	1531	0.0005947	46	microRNA targets for mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-340 from miRNAtargetUnion	www.mirbase.org...
Null mirtarget2.pictar.tarbase.targetsUnion.hsa-miR-1	View Gene Set	1.218e-05	703	0.0005995	47	microRNA targets for mirtarget2.pictar.tarbase.targetsUnion.hsa-miR-1 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-495	View Gene Set	1.354e-05	2691	0.0006526	48	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-495 from miRNAtargetUnion	www.mirbase.org...
Null mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-206	View Gene Set	1.396e-05	867	0.0006594	49	microRNA targets for mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-206 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-802	View Gene Set	1.558e-05	2387	0.0007072	50	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-802 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-888	View Gene Set	1.559e-05	1983	0.0007072	50	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-888 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-124	View Gene Set	1.723e-05	1965	0.0007666	52	microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-124 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.pictar.targetscan.targetsUnion.hsa-miR-206	View Gene Set	1.893e-05	1275	0.0008196	53	microRNA targets for mirbase.pictar.targetscan.targetsUnion.hsa-miR-206 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.tarbase.targetscan.targetsUnion.hsa-miR-206	View Gene Set	1.913e-05	1175	0.0008196	53	microRNA targets for mirbase.tarbase.targetscan.targetsUnion.hsa-miR-206 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-19a	View Gene Set	2.136e-05	1473	0.0008828	55	microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-19a from miRNAtargetUnion	www.mirbase.org...
Null mirtarget2.tarbase.targetscan.targetsUnion.hsa-miR-124	View Gene Set	2.109e-05	1448	0.0008828	55	microRNA targets for mirtarget2.tarbase.targetscan.targetsUnion.hsa-miR-124 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-506	View Gene Set	2.189e-05	2120	0.0008885	57	microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-506 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-518c	View Gene Set	2.317e-05	1471	0.0009106	58	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-518c from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-454	View Gene Set	2.322e-05	1460	0.0009106	58	microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-454 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-124	View Gene Set	2.62e-05	2458	0.00101	60	microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-124 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-570	View Gene Set	3.004e-05	3769	0.001121	61	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-570 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-1	View Gene Set	2.998e-05	1160	0.001121	61	microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-1 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-524-5p	View Gene Set	3.219e-05	3213	0.001182	63	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-524-5p from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-1	View Gene Set	3.404e-05	2393	0.001231	64	microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-1 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-522	View Gene Set	3.559e-05	2524	0.001253	65	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-522 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.tarbase.targetsUnion.hsa-miR-1	View Gene Set	3.573e-05	2270	0.001253	65	microRNA targets for miranda.mirbase.tarbase.targetsUnion.hsa-miR-1 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-421	View Gene Set	4.468e-05	1830	0.001543	67	microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-421 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-142-5p	View Gene Set	4.858e-05	2782	0.001637	68	microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-142-5p from miRNAtargetUnion	www.mirbase.org...
Null miranda.pictar.tarbase.targetsUnion.hsa-miR-1	View Gene Set	4.88e-05	2000	0.001637	68	microRNA targets for miranda.pictar.tarbase.targetsUnion.hsa-miR-1 from miRNAtargetUnion	www.mirbase.org...
Null mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-186	View Gene Set	5.034e-05	1563	0.001664	70	microRNA targets for mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-186 from miRNAtargetUnion	www.mirbase.org...
Null miranda.pictar.tarbase.targetsUnion.hsa-miR-200c	View Gene Set	5.255e-05	1905	0.001713	71	microRNA targets for miranda.pictar.tarbase.targetsUnion.hsa-miR-200c from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-142-5p	View Gene Set	5.738e-05	2931	0.001844	72	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-142-5p from miRNAtargetUnion	www.mirbase.org...
Null miranda.tarbase.targetscan.targetsUnion.hsa-miR-124	View Gene Set	6.249e-05	2020	0.001981	73	microRNA targets for miranda.tarbase.targetscan.targetsUnion.hsa-miR-124 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-340	View Gene Set	7.282e-05	3291	0.002277	74	microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-340 from miRNAtargetUnion	www.mirbase.org...
Null miranda.pictar.targetscan.targetsUnion.hsa-miR-340	View Gene Set	7.443e-05	2961	0.002296	75	microRNA targets for miranda.pictar.targetscan.targetsUnion.hsa-miR-340 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-186	View Gene Set	7.557e-05	3195	0.002301	76	microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-186 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.tarbase.targetscan.targetsUnion.hsa-miR-107	View Gene Set	7.67e-05	1140	0.002305	77	microRNA targets for mirbase.tarbase.targetscan.targetsUnion.hsa-miR-107 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.tarbase.targetsUnion.hsa-miR-124	View Gene Set	8.088e-05	1943	0.002399	78	microRNA targets for miranda.mirbase.tarbase.targetsUnion.hsa-miR-124 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-421	View Gene Set	8.301e-05	2238	0.002427	79	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-421 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-186	View Gene Set	8.392e-05	3166	0.002427	79	microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-186 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-506	View Gene Set	8.669e-05	2522	0.002476	81	microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-506 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-107	View Gene Set	9.085e-05	1282	0.002551	82	microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-107 from miRNAtargetUnion	www.mirbase.org...
Null mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-133a	View Gene Set	9.15e-05	744	0.002551	82	microRNA targets for mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-133a from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-186	View Gene Set	0.0001015	1788	0.002795	84	microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-186 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-454	View Gene Set	0.0001068	2494	0.00284	85	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-454 from miRNAtargetUnion	www.mirbase.org...
Null miranda.pictar.targetscan.targetsUnion.hsa-miR-1	View Gene Set	0.0001045	2071	0.00284	85	microRNA targets for miranda.pictar.targetscan.targetsUnion.hsa-miR-1 from miRNAtargetUnion	www.mirbase.org...
Null miranda.pictar.targetscan.targetsUnion.hsa-miR-206	View Gene Set	0.0001058	1924	0.00284	85	microRNA targets for miranda.pictar.targetscan.targetsUnion.hsa-miR-206 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-340	View Gene Set	0.000112	2801	0.002945	88	microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-340 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-17	View Gene Set	0.0001136	3143	0.002954	89	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-17 from miRNAtargetUnion	www.mirbase.org...
Null mirtarget2.pictar.tarbase.targetsUnion.hsa-miR-21	View Gene Set	0.0001156	404	0.002971	90	microRNA targets for mirtarget2.pictar.tarbase.targetsUnion.hsa-miR-21 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-124	View Gene Set	0.0001237	1984	0.003145	91	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-124 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-144	View Gene Set	0.0001378	2413	0.003467	92	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-144 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-1	View Gene Set	0.0001405	2328	0.003496	93	microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-1 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-124	View Gene Set	0.0001457	2056	0.003586	94	microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-124 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-340	View Gene Set	0.0001512	3099	0.003606	95	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-340 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-568	View Gene Set	0.0001496	2599	0.003606	95	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-568 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-607	View Gene Set	0.0001505	3059	0.003606	95	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-607 from miRNAtargetUnion	www.mirbase.org...
Null mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-133b	View Gene Set	0.0001546	758	0.003649	98	microRNA targets for mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-133b from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-206	View Gene Set	0.0001654	1942	0.003827	99	microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-206 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.pictar.targetscan.targetsUnion.hsa-miR-340	View Gene Set	0.0001641	1482	0.003827	99	microRNA targets for mirbase.pictar.targetscan.targetsUnion.hsa-miR-340 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-212	View Gene Set	0.000167	1277	0.003827	101	microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-212 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-340	View Gene Set	0.0001708	1341	0.003875	102	microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-340 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-337-5p	View Gene Set	0.0001809	1124	0.003923	103	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-337-5p from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-520d-5p	View Gene Set	0.0001801	2818	0.003923	103	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-520d-5p from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-1	View Gene Set	0.0001756	2092	0.003923	103	microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-1 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-194	View Gene Set	0.0001814	1092	0.003923	103	microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-194 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.tarbase.targetsUnion.hsa-miR-200c	View Gene Set	0.0001764	1377	0.003923	103	microRNA targets for mirbase.mirtarget2.tarbase.targetsUnion.hsa-miR-200c from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-369-3p	View Gene Set	0.0001902	2149	0.004037	108	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-369-3p from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-195	View Gene Set	0.0001896	1693	0.004037	108	microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-195 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-103	View Gene Set	0.0001944	1299	0.004089	110	microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-103 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-613	View Gene Set	0.0002044	1353	0.004261	111	microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-613 from miRNAtargetUnion	www.mirbase.org...
Null miranda.tarbase.targetscan.targetsUnion.hsa-miR-206	View Gene Set	0.0002069	1845	0.004275	112	microRNA targets for miranda.tarbase.targetscan.targetsUnion.hsa-miR-206 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-421	View Gene Set	0.0002237	2222	0.004573	113	microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-421 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-506	View Gene Set	0.0002253	1985	0.004573	113	microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-506 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-374a	View Gene Set	0.0002373	2329	0.004775	115	microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-374a from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-26b	View Gene Set	0.0002457	1361	0.004902	116	microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-26b from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-19a	View Gene Set	0.0002533	1678	0.00501	117	microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-19a from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-376a	View Gene Set	0.0002614	1836	0.005053	118	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-376a from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.tarbase.targetsUnion.hsa-miR-124	View Gene Set	0.000262	1518	0.005053	118	microRNA targets for miranda.mirtarget2.tarbase.targetsUnion.hsa-miR-124 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-186	View Gene Set	0.0002598	1780	0.005053	118	microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-186 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-613	View Gene Set	0.0002696	1685	0.005156	121	microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-613 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-518f	View Gene Set	0.0002742	1303	0.005195	122	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-518f from miRNAtargetUnion	www.mirbase.org...
Null miranda.pictar.targetscan.targetsUnion.hsa-miR-182	View Gene Set	0.0002761	2450	0.005195	122	microRNA targets for miranda.pictar.targetscan.targetsUnion.hsa-miR-182 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-452	View Gene Set	0.0002974	2595	0.005382	124	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-452 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-891b	View Gene Set	0.0002964	1644	0.005382	124	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-891b from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.tarbase.targetsUnion.hsa-miR-1	View Gene Set	0.0002919	1979	0.005382	124	microRNA targets for miranda.mirtarget2.tarbase.targetsUnion.hsa-miR-1 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-144	View Gene Set	0.0002977	1652	0.005382	124	microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-144 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-16	View Gene Set	0.0002924	1737	0.005382	124	microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-16 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-186	View Gene Set	0.0003021	3330	0.005418	129	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-186 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-30d	View Gene Set	0.000315	1845	0.005565	130	microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-30d from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-9	View Gene Set	0.0003147	1733	0.005565	130	microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-9 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-377	View Gene Set	0.0003269	1984	0.00573	132	microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-377 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-144	View Gene Set	0.0003488	1553	0.006069	133	microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-144 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-338-5p	View Gene Set	0.0003555	2455	0.006094	134	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-338-5p from miRNAtargetUnion	www.mirbase.org...
Null mirtarget2.tarbase.targetscan.targetsUnion.hsa-miR-155	View Gene Set	0.0003534	668	0.006094	134	microRNA targets for mirtarget2.tarbase.targetscan.targetsUnion.hsa-miR-155 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-600	View Gene Set	0.0003739	1977	0.006253	136	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-600 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-144	View Gene Set	0.0003753	2497	0.006253	136	microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-144 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.pictar.targetscan.targetsUnion.hsa-miR-19a	View Gene Set	0.0003756	1633	0.006253	136	microRNA targets for mirbase.pictar.targetscan.targetsUnion.hsa-miR-19a from miRNAtargetUnion	www.mirbase.org...
Null mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-9	View Gene Set	0.0003729	1260	0.006253	136	microRNA targets for mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-9 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-376a	View Gene Set	0.0003828	1778	0.006327	140	microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-376a from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-454	View Gene Set	0.0003985	2596	0.006541	141	microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-454 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-106b	View Gene Set	0.000405	2713	0.006553	142	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-106b from miRNAtargetUnion	www.mirbase.org...
Null pictar.tarbase.targetscan.targetsUnion.hsa-miR-155	View Gene Set	0.000404	435	0.006553	142	microRNA targets for pictar.tarbase.targetscan.targetsUnion.hsa-miR-155 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-34b	View Gene Set	0.0004112	1848	0.006608	144	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-34b from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-144	View Gene Set	0.0004178	2426	0.006667	145	microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-144 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-216b	View Gene Set	0.0004261	1626	0.006753	146	microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-216b from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-194	View Gene Set	0.0004378	1105	0.006881	147	microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-194 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.pictar.targetscan.targetsUnion.hsa-miR-103	View Gene Set	0.0004401	1559	0.006881	147	microRNA targets for mirbase.pictar.targetscan.targetsUnion.hsa-miR-103 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.pictar.targetscan.targetsUnion.hsa-miR-107	View Gene Set	0.0004445	1545	0.006903	149	microRNA targets for mirbase.pictar.targetscan.targetsUnion.hsa-miR-107 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-20a	View Gene Set	0.0004547	3072	0.007015	150	microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-20a from miRNAtargetUnion	www.mirbase.org...
Null mirbase.pictar.tarbase.targetsUnion.hsa-miR-222	View Gene Set	0.0004585	899	0.007027	151	microRNA targets for mirbase.pictar.tarbase.targetsUnion.hsa-miR-222 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-1	View Gene Set	0.0004618	2285	0.00703	152	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-1 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-30d	View Gene Set	0.0004726	2339	0.007148	153	microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-30d from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-369-3p	View Gene Set	0.000478	2089	0.007182	154	microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-369-3p from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.tarbase.targetsUnion.hsa-miR-16	View Gene Set	0.0004852	1241	0.007243	155	microRNA targets for mirbase.mirtarget2.tarbase.targetsUnion.hsa-miR-16 from miRNAtargetUnion	www.mirbase.org...
Null miranda.pictar.targetscan.targetsUnion.hsa-miR-186	View Gene Set	0.0004894	2993	0.00726	156	microRNA targets for miranda.pictar.targetscan.targetsUnion.hsa-miR-186 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.tarbase.targetsUnion.hsa-miR-107	View Gene Set	0.0004938	1000	0.007278	157	microRNA targets for mirbase.mirtarget2.tarbase.targetsUnion.hsa-miR-107 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-935	View Gene Set	0.0005012	1566	0.00734	158	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-935 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-106b	View Gene Set	0.0005217	2662	0.007545	159	microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-106b from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-191	View Gene Set	0.0005203	1229	0.007545	159	microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-191 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.pictar.targetscan.targetsUnion.hsa-miR-30d	View Gene Set	0.0005462	1780	0.007851	161	microRNA targets for mirbase.pictar.targetscan.targetsUnion.hsa-miR-30d from miRNAtargetUnion	www.mirbase.org...
Null mirbase.pictar.targetscan.targetsUnion.hsa-miR-194	View Gene Set	0.0005531	1030	0.007901	162	microRNA targets for mirbase.pictar.targetscan.targetsUnion.hsa-miR-194 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-621	View Gene Set	0.0005639	1222	0.008006	163	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-621 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-148b	View Gene Set	0.0005822	2141	0.008123	164	microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-148b from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-186	View Gene Set	0.0005769	3176	0.008123	164	microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-186 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-20a	View Gene Set	0.0005827	2679	0.008123	164	microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-20a from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-374a	View Gene Set	0.0005935	2500	0.008224	167	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-374a from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.tarbase.targetsUnion.hsa-miR-155	View Gene Set	0.0006047	1915	0.008329	168	microRNA targets for miranda.mirbase.tarbase.targetsUnion.hsa-miR-155 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-212	View Gene Set	0.0006493	1286	0.008891	169	microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-212 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-17	View Gene Set	0.0006732	3203	0.009057	170	microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-17 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-206	View Gene Set	0.0006655	2269	0.009057	170	microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-206 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-130b	View Gene Set	0.0006708	1947	0.009057	170	microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-130b from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-212	View Gene Set	0.0006916	1753	0.009251	173	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-212 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-26a	View Gene Set	0.0007072	1388	0.009404	174	microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-26a from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-381	View Gene Set	0.0007167	2235	0.009477	175	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-381 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-30d	View Gene Set	0.000742	2216	0.00974	176	microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-30d from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-15b	View Gene Set	0.000745	1773	0.00974	176	microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-15b from miRNAtargetUnion	www.mirbase.org...
Null mirbase.pictar.targetscan.targetsUnion.hsa-miR-144	View Gene Set	0.0007563	1507	0.009832	178	microRNA targets for mirbase.pictar.targetscan.targetsUnion.hsa-miR-144 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-646	View Gene Set	0.0007631	2250	0.009834	179	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-646 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-130a	View Gene Set	0.000765	1949	0.009834	179	microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-130a from miRNAtargetUnion	www.mirbase.org...
Null mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-142-3p	View Gene Set	0.0007798	361	0.009969	181	microRNA targets for mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-142-3p from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-506	View Gene Set	0.0008125	2053	0.01013	182	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-506 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-518d-3p	View Gene Set	0.0008144	1213	0.01013	182	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-518d-3p from miRNAtargetUnion	www.mirbase.org...
Null miranda.pictar.targetscan.targetsUnion.hsa-miR-30b	View Gene Set	0.0008061	2140	0.01013	182	microRNA targets for miranda.pictar.targetscan.targetsUnion.hsa-miR-30b from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-200c	View Gene Set	0.0008066	1568	0.01013	182	microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-200c from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-206	View Gene Set	0.0008109	1189	0.01013	182	microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-206 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-194	View Gene Set	0.0008211	1760	0.01016	187	microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-194 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-34b	View Gene Set	0.0008277	1278	0.01019	188	microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-34b from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-216b	View Gene Set	0.0008373	1976	0.01021	189	microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-216b from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-374a	View Gene Set	0.000838	1519	0.01021	189	microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-374a from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-206	View Gene Set	0.000853	1890	0.01028	191	microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-206 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-9	View Gene Set	0.0008488	1555	0.01028	191	microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-9 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.tarbase.targetsUnion.hsa-miR-130a	View Gene Set	0.0008602	1799	0.01031	193	microRNA targets for miranda.mirtarget2.tarbase.targetsUnion.hsa-miR-130a from miRNAtargetUnion	www.mirbase.org...
Null mirbase.pictar.tarbase.targetsUnion.hsa-miR-26a	View Gene Set	0.0008648	1142	0.01032	194	microRNA targets for mirbase.pictar.tarbase.targetsUnion.hsa-miR-26a from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-144	View Gene Set	0.000935	2184	0.01107	195	microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-144 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.pictar.targetscan.targetsUnion.hsa-miR-191	View Gene Set	0.0009381	752	0.01107	195	microRNA targets for mirbase.pictar.targetscan.targetsUnion.hsa-miR-191 from miRNAtargetUnion	www.mirbase.org...
Null miranda.pictar.targetscan.targetsUnion.hsa-miR-32	View Gene Set	0.0009638	1675	0.01129	197	microRNA targets for miranda.pictar.targetscan.targetsUnion.hsa-miR-32 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.pictar.targetscan.targetsUnion.hsa-miR-9	View Gene Set	0.0009705	1730	0.01129	197	microRNA targets for mirbase.pictar.targetscan.targetsUnion.hsa-miR-9 from miRNAtargetUnion	www.mirbase.org...
Null mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-23a	View Gene Set	0.0009664	1406	0.01129	197	microRNA targets for mirtarget2.pictar.targetscan.targetsUnion.hsa-miR-23a from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-1	View Gene Set	0.001004	2033	0.01146	200	microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-1 from miRNAtargetUnion	www.mirbase.org...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null EGFR1 Signaling Pathway	View Gene Set	1.42e-14	159	1.42e-13	1	From NetPath for EGFR1 Signaling Pathway	www.netpath.org...
Null TGF-beta Receptor Signaling Pathway	View Gene Set	1.395e-14	792	1.42e-13	1	From NetPath for TGF-beta Receptor Signaling Pathway	www.netpath.org...
Null Androgen Receptor Signaling Pathway	View Gene Set	1.07e-09	437	7.133e-09	3	From NetPath for Androgen Receptor Signaling Pathway	www.netpath.org...
Null IL-1 Signaling Pathway	View Gene Set	3.26e-07	154	1.63e-06	4	From NetPath for IL-1 Signaling Pathway	www.netpath.org...
Null TNF-alpha Signaling Pathway	View Gene Set	1.213e-06	728	4.852e-06	5	From NetPath for TNF-alpha Signaling Pathway	www.netpath.org...
Null T Cell Receptor Signaling Pathway	View Gene Set	0.001193	291	0.003976	6	From NetPath for T Cell Receptor Signaling Pathway	www.netpath.org...
Null B Cell Receptor Signaling Pathway	View Gene Set	0.001819	242	0.005197	7	From NetPath for B Cell Receptor Signaling Pathway	www.netpath.org...
Null IL-4 Signaling Pathway	View Gene Set	0.004989	217	0.01247	8	From NetPath for IL-4 Signaling Pathway	www.netpath.org...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null TGF-beta Receptor Signaling Pathway	View Gene Set	8.728e-07	739	1.658e-05	1	From NetPath for TGF-beta Receptor Signaling Pathway	www.netpath.org...
Null TNF-alpha Signaling Pathway	View Gene Set	1.91e-05	162	0.0001815	2	From NetPath for TNF-alpha Signaling Pathway	www.netpath.org...
Null B Cell Receptor Signaling Pathway	View Gene Set	0.0004373	182	0.00277	3	From NetPath for B Cell Receptor Signaling Pathway	www.netpath.org...
Null EGFR1 Signaling Pathway	View Gene Set	0.005648	98	0.02683	4	From NetPath for EGFR1 Signaling Pathway	www.netpath.org...
Null Alpha6 Beta4 Integrin Signaling Pathway	View Gene Set	0.00797	4	0.03028	5	From NetPath for Alpha6 Beta4 Integrin Signaling Pathway	www.netpath.org...
Null Androgen Receptor Signaling Pathway	View Gene Set	0.01325	161	0.03597	6	From NetPath for Androgen Receptor Signaling Pathway	www.netpath.org...
Null IL-4 Signaling Pathway	View Gene Set	0.01245	90	0.03597	6	From NetPath for IL-4 Signaling Pathway	www.netpath.org...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null EGFR1 Signaling Pathway	View Gene Set	3.914e-14	253	7.828e-13	1	From NetPath for EGFR1 Signaling Pathway	www.netpath.org...
Null TGF-beta Receptor Signaling Pathway	View Gene Set	1.873e-13	1296	1.873e-12	2	From NetPath for TGF-beta Receptor Signaling Pathway	www.netpath.org...
Null Androgen Receptor Signaling Pathway	View Gene Set	2.109e-10	586	1.406e-09	3	From NetPath for Androgen Receptor Signaling Pathway	www.netpath.org...
Null TNF-alpha Signaling Pathway	View Gene Set	3.896e-08	863	1.948e-07	4	From NetPath for TNF-alpha Signaling Pathway	www.netpath.org...
Null B Cell Receptor Signaling Pathway	View Gene Set	4.292e-06	418	1.717e-05	5	From NetPath for B Cell Receptor Signaling Pathway	www.netpath.org...
Null IL-1 Signaling Pathway	View Gene Set	3.68e-05	233	0.0001227	6	From NetPath for IL-1 Signaling Pathway	www.netpath.org...
Null IL-4 Signaling Pathway	View Gene Set	0.0004445	301	0.00127	7	From NetPath for IL-4 Signaling Pathway	www.netpath.org...
Null T Cell Receptor Signaling Pathway	View Gene Set	0.0005497	349	0.001374	8	From NetPath for T Cell Receptor Signaling Pathway	www.netpath.org...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null EGFR1	View Gene Set	4.198e-12	105	1.007e-10	1	From NetPath for EGFR1	www.netpath.org...
Null TCR	View Gene Set	4.779e-09	448	5.735e-08	2	From NetPath for TCR	www.netpath.org...
Null IL1	View Gene Set	2.462e-07	85	1.969e-06	3	From NetPath for IL1	www.netpath.org...
Null TGF_beta_Receptor	View Gene Set	2.423e-05	212	0.0001454	4	From NetPath for TGF_beta_Receptor	www.netpath.org...
Null IL4	View Gene Set	0.0006204	199	0.002978	5	From NetPath for IL4	www.netpath.org...
Null FSH	View Gene Set	0.01185	164	0.04741	6	From NetPath for FSH	www.netpath.org...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null EGFR1	View Gene Set	1.128e-10	153	2.707e-09	1	From NetPath for EGFR1	www.netpath.org...
Null TCR	View Gene Set	1.957e-09	605	2.349e-08	2	From NetPath for TCR	www.netpath.org...
Null TGF_beta_Receptor	View Gene Set	1.871e-06	594	1.496e-05	3	From NetPath for TGF_beta_Receptor	www.netpath.org...
Null IL1	View Gene Set	2.017e-05	120	0.000121	4	From NetPath for IL1	www.netpath.org...
Null IL4	View Gene Set	9.14e-05	269	0.0004387	5	From NetPath for IL4	www.netpath.org...
Null FSH	View Gene Set	0.00135	263	0.005401	6	From NetPath for FSH	www.netpath.org...
Null TSH	View Gene Set	0.007602	90	0.02606	7	From NetPath for TSH	www.netpath.org...
Null IL2	View Gene Set	0.01463	796	0.04154	8	From NetPath for IL2	www.netpath.org...
Null Notch	View Gene Set	0.01558	22	0.04154	8	From NetPath for Notch	www.netpath.org...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null TGF_beta_Receptor	View Gene Set	0.0009562	399	0.01817	1	From NetPath for TGF_beta_Receptor	www.netpath.org...
Null TSH	View Gene Set	0.004172	45	0.03963	2	From NetPath for TSH	www.netpath.org...

Results

AFA results for: tSAHAda4PC3

Gene Set Collection: KEGG

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: GO

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: Broad.c2.CGP

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: Broad.c2.CP

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: Broad.c2.CP.KEGG

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: Broad.c2.CP.REACTOME

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: Broad.c3.MIR

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: Broad.c3.TFT

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: Broad.c4.CGN

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: Broad.c4.CM

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: Broad.c5.BP

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: Broad.c5.CC

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: PMID

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: ChromosomalTiles5Mb

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: Prosite

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: ppi.BioGRID

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: ppi.anyDB

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: pathwayCommons.cell-map

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: pathwayCommons.nci-nature

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: pathwayCommons.reactome

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: miranda.targets

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: mirbase.targets

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: mirtarget2.targets

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: pictar.targets

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: tarbase.targets

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: targetscan.targets

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: miRNAtargetUnion

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: hprdBatch.UP

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: hprdBatch.DOWN

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: hprdBatch.DIFFERENT

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: hprdManual.UP

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: hprdManual.DOWN

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: hprdManual.DIFFERENT

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed