Results

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Go to: Gene Set Collection: KEGG
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Go to: Gene Set Collection: Broad.c2.CP.KEGG
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Go to: Gene Set Collection: Broad.c4.CM
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Go to: Gene Set Collection: Broad.c5.MF
Go to: Gene Set Collection: PMID
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Go to: Gene Set Collection: ppi.BIND
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Go to: Gene Set Collection: pathwayCommons.cell-map
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Go to: Gene Set Collection: pathwayCommons.reactome
Go to: Gene Set Collection: miranda.targets
Go to: Gene Set Collection: mirbase.targets
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AFA results for: CG1521vsControl

Click on the heading for any column to sort by that column.

Gene Set Collection: KEGG

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
KEGG 04110 View Gene Set 6.599e-12 128 1.412e-09 1 Cell cycle www.genome.jp/d...
KEGG 03040 View Gene Set 9.343e-10 128 9.997e-08 2 Spliceosome www.genome.jp/d...
KEGG 04914 View Gene Set 1.674e-06 87 0.0001194 3 Progesterone-mediated oocyte maturation www.genome.jp/d...
KEGG 04114 View Gene Set 2.272e-05 114 0.001216 4 Oocyte meiosis www.genome.jp/d...
KEGG 03018 View Gene Set 3.961e-05 59 0.001695 5 RNA degradation www.genome.jp/d...
KEGG 01100 View Gene Set 6.462e-05 1120 0.002305 6 Metabolic pathways www.genome.jp/d...
KEGG 04120 View Gene Set 0.0001435 139 0.004387 7 Ubiquitin mediated proteolysis www.genome.jp/d...
KEGG 00240 View Gene Set 0.0002062 99 0.005342 8 Pyrimidine metabolism www.genome.jp/d...
KEGG 05012 View Gene Set 0.0002247 132 0.005342 8 Parkinson's disease www.genome.jp/d...
KEGG 00290 View Gene Set 0.0004396 11 0.008553 10 Valine leucine and isoleucine biosynthesis www.genome.jp/d...
KEGG 00970 View Gene Set 0.0004021 41 0.008553 10 Aminoacyl-tRNA biosynthesis www.genome.jp/d...
KEGG 00100 View Gene Set 0.0008991 17 0.01603 12 Steroid biosynthesis www.genome.jp/d...
KEGG 03030 View Gene Set 0.001122 36 0.01846 13 DNA replication www.genome.jp/d...
KEGG 05016 View Gene Set 0.001313 184 0.02007 14 Huntington's disease www.genome.jp/d...
KEGG 03010 View Gene Set 0.002552 88 0.03641 15 Ribosome www.genome.jp/d...
KEGG 00230 View Gene Set 0.003095 161 0.0414 16 Purine metabolism www.genome.jp/d...
KEGG 00020 View Gene Set 0.003558 31 0.04203 17 Citrate cycle (TCA cycle) www.genome.jp/d...
KEGG 03060 View Gene Set 0.003533 24 0.04203 17 Protein export www.genome.jp/d...
KEGG 04141 View Gene Set 0.003732 167 0.04203 17 Protein processing in endoplasmic reticulum www.genome.jp/d...

Gene Set Collection: GO

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
GO GO:0044428 View Gene Set 1.614e-55 1938 2.156e-51 1 nuclear part amigo.geneontol...
GO GO:0043227 View Gene Set 5.096e-54 8383 2.462e-50 2 membrane-bounded organelle amigo.geneontol...
GO GO:0043231 View Gene Set 5.528e-54 8376 2.462e-50 2 intracellular membrane-bounded organelle amigo.geneontol...
GO GO:0070013 View Gene Set 3.548e-53 1845 1.185e-49 4 intracellular organelle lumen amigo.geneontol...
GO GO:0031974 View Gene Set 5.725e-52 1917 1.53e-48 5 membrane-enclosed lumen amigo.geneontol...
GO GO:0043233 View Gene Set 1.421e-49 1881 3.164e-46 6 organelle lumen amigo.geneontol...
GO GO:0005634 View Gene Set 2.51e-47 5198 4.79e-44 7 nucleus amigo.geneontol...
GO GO:0043229 View Gene Set 8.227e-47 9346 1.374e-43 8 intracellular organelle amigo.geneontol...
GO GO:0043226 View Gene Set 3.84e-46 9360 5.7e-43 9 organelle amigo.geneontol...
GO GO:0031981 View Gene Set 1.626e-44 1518 2.172e-41 10 nuclear lumen amigo.geneontol...
GO GO:0044446 View Gene Set 6.72e-44 5019 8.162e-41 11 intracellular organelle part amigo.geneontol...
GO GO:0044424 View Gene Set 1.064e-43 10976 1.184e-40 12 intracellular part amigo.geneontol...
GO GO:0044422 View Gene Set 1.547e-42 5089 1.59e-39 13 organelle part amigo.geneontol...
GO GO:0005622 View Gene Set 4.554e-42 11329 4.346e-39 14 intracellular amigo.geneontol...
GO GO:0006396 View Gene Set 2.731e-40 578 2.432e-37 15 RNA processing amigo.geneontol...
GO GO:0003723 View Gene Set 7.266e-30 732 6.067e-27 16 RNA binding amigo.geneontol...
GO GO:0005654 View Gene Set 3.386e-29 939 2.661e-26 17 nucleoplasm amigo.geneontol...
GO GO:0034470 View Gene Set 4.236e-29 193 3.144e-26 18 ncRNA processing amigo.geneontol...
GO GO:0030529 View Gene Set 2.846e-28 504 2.001e-25 19 ribonucleoprotein complex amigo.geneontol...
GO GO:0034660 View Gene Set 4.36e-28 236 2.912e-25 20 ncRNA metabolic process amigo.geneontol...
GO GO:0005730 View Gene Set 7.137e-28 734 4.54e-25 21 nucleolus amigo.geneontol...
GO GO:0044260 View Gene Set 2.364e-26 5699 1.436e-23 22 cellular macromolecule metabolic process amigo.geneontol...
GO GO:0032991 View Gene Set 5.354e-26 3237 3.11e-23 23 macromolecular complex amigo.geneontol...
GO GO:0005694 View Gene Set 9.028e-26 507 5.026e-23 24 chromosome amigo.geneontol...
GO GO:0022403 View Gene Set 7.285e-25 522 3.893e-22 25 cell cycle phase amigo.geneontol...
GO GO:0022613 View Gene Set 1.436e-24 194 7.376e-22 26 ribonucleoprotein complex biogenesis amigo.geneontol...
GO GO:0044237 View Gene Set 3.919e-24 7431 1.939e-21 27 cellular metabolic process amigo.geneontol...
GO GO:0005739 View Gene Set 4.476e-24 1274 2.136e-21 28 mitochondrion amigo.geneontol...
GO GO:0044427 View Gene Set 5.445e-23 420 2.509e-20 29 chromosomal part amigo.geneontol...
GO GO:0007049 View Gene Set 6.806e-23 1006 3.031e-20 30 cell cycle amigo.geneontol...
GO GO:0043228 View Gene Set 2.92e-22 2690 1.219e-19 31 non-membrane-bounded organelle amigo.geneontol...
GO GO:0043232 View Gene Set 2.92e-22 2690 1.219e-19 31 intracellular non-membrane-bounded organelle amigo.geneontol...
GO GO:0000278 View Gene Set 3.139e-22 489 1.271e-19 33 mitotic cell cycle amigo.geneontol...
GO GO:0090304 View Gene Set 8.933e-22 3724 3.51e-19 34 nucleic acid metabolic process amigo.geneontol...
GO GO:0000279 View Gene Set 4.515e-21 406 1.723e-18 35 M phase amigo.geneontol...
GO GO:0000280 View Gene Set 6.433e-21 276 2.323e-18 36 nuclear division amigo.geneontol...
GO GO:0007067 View Gene Set 6.433e-21 276 2.323e-18 36 mitosis amigo.geneontol...
GO GO:0022402 View Gene Set 7.078e-21 676 2.489e-18 38 cell cycle process amigo.geneontol...
GO GO:0000087 View Gene Set 1.971e-20 286 6.751e-18 39 M phase of mitotic cell cycle amigo.geneontol...
GO GO:0043170 View Gene Set 2.087e-20 6274 6.799e-18 40 macromolecule metabolic process amigo.geneontol...
GO GO:0048285 View Gene Set 2.046e-20 286 6.799e-18 40 organelle fission amigo.geneontol...
GO GO:0042254 View Gene Set 4.051e-20 130 1.289e-17 42 ribosome biogenesis amigo.geneontol...
GO GO:0000775 View Gene Set 3.784e-19 146 1.176e-16 43 chromosome centromeric region amigo.geneontol...
GO GO:0010467 View Gene Set 5.901e-19 3806 1.792e-16 44 gene expression amigo.geneontol...
GO GO:0008380 View Gene Set 1.289e-18 300 3.828e-16 45 RNA splicing amigo.geneontol...
GO GO:0034641 View Gene Set 2.565e-18 4584 7.451e-16 46 cellular nitrogen compound metabolic process amigo.geneontol...
GO GO:0003676 View Gene Set 3.742e-18 2979 1.064e-15 47 nucleic acid binding amigo.geneontol...
GO GO:0005737 View Gene Set 4.745e-18 7676 1.321e-15 48 cytoplasm amigo.geneontol...
GO GO:0016071 View Gene Set 4.901e-18 381 1.336e-15 49 mRNA metabolic process amigo.geneontol...
GO GO:0051301 View Gene Set 1.58e-17 358 4.143e-15 50 cell division amigo.geneontol...
GO GO:0044444 View Gene Set 1.581e-17 5184 4.143e-15 50 cytoplasmic part amigo.geneontol...
GO GO:0006139 View Gene Set 1.817e-17 4294 4.668e-15 52 nucleobase nucleoside nucleotide and nucleic acid metabolic process amigo.geneontol...
GO GO:0006807 View Gene Set 2.633e-17 4698 6.637e-15 53 nitrogen compound metabolic process amigo.geneontol...
GO GO:0044238 View Gene Set 6.137e-17 7629 1.518e-14 54 primary metabolic process amigo.geneontol...
GO GO:0008152 View Gene Set 1.597e-16 8439 3.88e-14 55 metabolic process amigo.geneontol...
GO GO:0000793 View Gene Set 1.991e-16 136 4.749e-14 56 condensed chromosome amigo.geneontol...
GO GO:0006364 View Gene Set 2.71e-16 97 6.352e-14 57 rRNA processing amigo.geneontol...
GO GO:0006397 View Gene Set 3.935e-16 317 9.064e-14 58 mRNA processing amigo.geneontol...
GO GO:0006996 View Gene Set 4.186e-16 1501 9.479e-14 59 organelle organization amigo.geneontol...
GO GO:0044429 View Gene Set 4.508e-16 619 1.004e-13 60 mitochondrial part amigo.geneontol...
GO GO:0000776 View Gene Set 1.978e-15 92 4.332e-13 61 kinetochore amigo.geneontol...
GO GO:0016072 View Gene Set 2.696e-15 101 5.809e-13 62 rRNA metabolic process amigo.geneontol...
GO GO:0000166 View Gene Set 7.069e-15 2257 1.499e-12 63 nucleotide binding amigo.geneontol...
GO GO:0009987 View Gene Set 1.956e-14 11620 4.084e-12 64 cellular process amigo.geneontol...
GO GO:0005819 View Gene Set 2.458e-14 167 5.052e-12 65 spindle amigo.geneontol...
GO GO:0044451 View Gene Set 3.038e-14 600 6.149e-12 66 nucleoplasm part amigo.geneontol...
GO GO:0031967 View Gene Set 3.803e-14 672 7.584e-12 67 organelle envelope amigo.geneontol...
GO GO:0006399 View Gene Set 5.111e-14 118 1.004e-11 68 tRNA metabolic process amigo.geneontol...
GO GO:0051276 View Gene Set 1.228e-13 548 2.378e-11 69 chromosome organization amigo.geneontol...
GO GO:0006259 View Gene Set 1.836e-13 592 3.504e-11 70 DNA metabolic process amigo.geneontol...
GO GO:0006412 View Gene Set 2.102e-13 412 3.954e-11 71 translation amigo.geneontol...
GO GO:0000779 View Gene Set 2.558e-13 79 4.747e-11 72 condensed chromosome centromeric region amigo.geneontol...
GO GO:0005488 View Gene Set 2.69e-13 12334 4.923e-11 73 binding amigo.geneontol...
GO GO:0031975 View Gene Set 3.239e-13 685 5.848e-11 74 envelope amigo.geneontol...
GO GO:0005681 View Gene Set 3.976e-13 135 7.083e-11 75 spliceosomal complex amigo.geneontol...
GO GO:0000777 View Gene Set 4.117e-13 74 7.237e-11 76 condensed chromosome kinetochore amigo.geneontol...
GO GO:0016070 View Gene Set 1.114e-12 2596 1.933e-10 77 RNA metabolic process amigo.geneontol...
GO GO:0007059 View Gene Set 2.856e-12 94 4.891e-10 78 chromosome segregation amigo.geneontol...
GO GO:0044085 View Gene Set 6.239e-12 1167 1.055e-09 79 cellular component biogenesis amigo.geneontol...
GO GO:0044464 View Gene Set 9.136e-12 15066 1.526e-09 80 cell part amigo.geneontol...
GO GO:0005623 View Gene Set 9.65e-12 15067 1.592e-09 81 cell amigo.geneontol...
GO GO:0005515 View Gene Set 1.172e-11 8146 1.91e-09 82 protein binding amigo.geneontol...
GO GO:0006974 View Gene Set 1.22e-11 412 1.964e-09 83 response to DNA damage stimulus amigo.geneontol...
GO GO:0043234 View Gene Set 1.753e-11 2680 2.787e-09 84 protein complex amigo.geneontol...
GO GO:0046907 View Gene Set 1.88e-11 753 2.955e-09 85 intracellular transport amigo.geneontol...
GO GO:0008033 View Gene Set 2.252e-11 78 3.499e-09 86 tRNA processing amigo.geneontol...
GO GO:0008168 View Gene Set 2.288e-11 176 3.513e-09 87 methyltransferase activity amigo.geneontol...
GO GO:0003824 View Gene Set 3.28e-11 5198 4.979e-09 88 catalytic activity amigo.geneontol...
GO GO:0016741 View Gene Set 3.542e-11 179 5.317e-09 89 transferase activity transferring one-carbon groups amigo.geneontol...
GO GO:0000922 View Gene Set 2.396e-10 63 3.557e-08 90 spindle pole amigo.geneontol...
GO GO:0006260 View Gene Set 3.285e-10 239 4.77e-08 91 DNA replication amigo.geneontol...
GO GO:0006281 View Gene Set 3.267e-10 309 4.77e-08 91 DNA repair amigo.geneontol...
GO GO:0005759 View Gene Set 4.332e-10 223 6.157e-08 93 mitochondrial matrix amigo.geneontol...
GO GO:0031980 View Gene Set 4.332e-10 223 6.157e-08 93 mitochondrial lumen amigo.geneontol...
GO GO:0051641 View Gene Set 7.751e-10 1206 1.09e-07 95 cellular localization amigo.geneontol...
GO GO:0000228 View Gene Set 8.738e-10 177 1.216e-07 96 nuclear chromosome amigo.geneontol...
GO GO:0017076 View Gene Set 1.621e-09 1934 2.233e-07 97 purine nucleotide binding amigo.geneontol...
GO GO:0005740 View Gene Set 1.776e-09 444 2.422e-07 98 mitochondrial envelope amigo.geneontol...
GO GO:0044267 View Gene Set 2.584e-09 2465 3.487e-07 99 cellular protein metabolic process amigo.geneontol...
GO GO:0044249 View Gene Set 2.71e-09 4326 3.62e-07 100 cellular biosynthetic process amigo.geneontol...
GO GO:0000375 View Gene Set 2.737e-09 106 3.62e-07 101 RNA splicing via transesterification reactions amigo.geneontol...
GO GO:0031966 View Gene Set 3.089e-09 420 4.046e-07 102 mitochondrial membrane amigo.geneontol...
GO GO:0034621 View Gene Set 3.934e-09 458 5.102e-07 103 cellular macromolecular complex subunit organization amigo.geneontol...
GO GO:0005840 View Gene Set 4.408e-09 198 5.662e-07 104 ribosome amigo.geneontol...
GO GO:0051649 View Gene Set 5.353e-09 1116 6.812e-07 105 establishment of localization in cell amigo.geneontol...
GO GO:0051325 View Gene Set 5.949e-09 147 7.499e-07 106 interphase amigo.geneontol...
GO GO:0009058 View Gene Set 7.706e-09 4436 9.621e-07 107 biosynthetic process amigo.geneontol...
GO GO:0051329 View Gene Set 1.048e-08 138 1.296e-06 108 interphase of mitotic cell cycle amigo.geneontol...
GO GO:0000377 View Gene Set 1.213e-08 97 1.447e-06 109 RNA splicing via transesterification reactions with bulged adenosine as nucleophile amigo.geneontol...
GO GO:0000398 View Gene Set 1.213e-08 97 1.447e-06 109 nuclear mRNA splicing via spliceosome amigo.geneontol...
GO GO:0007051 View Gene Set 1.209e-08 57 1.447e-06 109 spindle organization amigo.geneontol...
GO GO:0005743 View Gene Set 1.191e-08 305 1.447e-06 109 mitochondrial inner membrane amigo.geneontol...
GO GO:0008104 View Gene Set 1.476e-08 1048 1.745e-06 113 protein localization amigo.geneontol...
GO GO:0016604 View Gene Set 1.518e-08 198 1.78e-06 114 nuclear body amigo.geneontol...
GO GO:0032553 View Gene Set 1.799e-08 1851 2.072e-06 115 ribonucleotide binding amigo.geneontol...
GO GO:0032555 View Gene Set 1.799e-08 1851 2.072e-06 115 purine ribonucleotide binding amigo.geneontol...
GO GO:0019866 View Gene Set 1.997e-08 334 2.28e-06 117 organelle inner membrane amigo.geneontol...
GO GO:0071103 View Gene Set 2.172e-08 140 2.459e-06 118 DNA conformation change amigo.geneontol...
GO GO:0000075 View Gene Set 2.97e-08 109 3.317e-06 119 cell cycle checkpoint amigo.geneontol...
GO GO:0051726 View Gene Set 2.98e-08 451 3.317e-06 119 regulation of cell cycle amigo.geneontol...
GO GO:0034645 View Gene Set 3.346e-08 3529 3.695e-06 121 cellular macromolecule biosynthetic process amigo.geneontol...
GO GO:0015031 View Gene Set 3.915e-08 888 4.288e-06 122 protein transport amigo.geneontol...
GO GO:0045184 View Gene Set 4.63e-08 904 5.029e-06 123 establishment of protein localization amigo.geneontol...
GO GO:0006325 View Gene Set 5.109e-08 425 5.505e-06 124 chromatin organization amigo.geneontol...
GO GO:0009059 View Gene Set 6.511e-08 3597 6.959e-06 125 macromolecule biosynthetic process amigo.geneontol...
GO GO:0001882 View Gene Set 8.7e-08 1630 9.225e-06 126 nucleoside binding amigo.geneontol...
GO GO:0000226 View Gene Set 9.509e-08 178 1e-05 127 microtubule cytoskeleton organization amigo.geneontol...
GO GO:0034622 View Gene Set 1.205e-07 393 1.258e-05 128 cellular macromolecular complex assembly amigo.geneontol...
GO GO:0015931 View Gene Set 1.239e-07 118 1.283e-05 129 nucleobase nucleoside nucleotide and nucleic acid transport amigo.geneontol...
GO GO:0044452 View Gene Set 1.265e-07 28 1.3e-05 130 nucleolar part amigo.geneontol...
GO GO:0003735 View Gene Set 1.299e-07 158 1.324e-05 131 structural constituent of ribosome amigo.geneontol...
GO GO:0005829 View Gene Set 1.311e-07 1323 1.327e-05 132 cytosol amigo.geneontol...
GO GO:0001883 View Gene Set 1.379e-07 1620 1.385e-05 133 purine nucleoside binding amigo.geneontol...
GO GO:0050657 View Gene Set 1.508e-07 102 1.481e-05 134 nucleic acid transport amigo.geneontol...
GO GO:0050658 View Gene Set 1.508e-07 102 1.481e-05 134 RNA transport amigo.geneontol...
GO GO:0051236 View Gene Set 1.508e-07 102 1.481e-05 134 establishment of RNA localization amigo.geneontol...
GO GO:0022618 View Gene Set 1.629e-07 76 1.589e-05 137 ribonucleoprotein complex assembly amigo.geneontol...
GO GO:0050000 View Gene Set 1.704e-07 17 1.637e-05 138 chromosome localization amigo.geneontol...
GO GO:0051303 View Gene Set 1.704e-07 17 1.637e-05 138 establishment of chromosome localization amigo.geneontol...
GO GO:0070727 View Gene Set 2.357e-07 503 2.249e-05 140 cellular macromolecule localization amigo.geneontol...
GO GO:0034613 View Gene Set 2.447e-07 501 2.319e-05 141 cellular protein localization amigo.geneontol...
GO GO:0051640 View Gene Set 2.567e-07 96 2.415e-05 142 organelle localization amigo.geneontol...
GO GO:0006403 View Gene Set 2.667e-07 104 2.492e-05 143 RNA localization amigo.geneontol...
GO GO:0000785 View Gene Set 2.922e-07 213 2.711e-05 144 chromatin amigo.geneontol...
GO GO:0005643 View Gene Set 3.066e-07 71 2.825e-05 145 nuclear pore amigo.geneontol...
GO GO:0000070 View Gene Set 3.526e-07 37 3.227e-05 146 mitotic sister chromatid segregation amigo.geneontol...
GO GO:0044454 View Gene Set 3.864e-07 139 3.512e-05 147 nuclear chromosome part amigo.geneontol...
GO GO:0000819 View Gene Set 3.968e-07 38 3.582e-05 148 sister chromatid segregation amigo.geneontol...
GO GO:0000940 View Gene Set 4.086e-07 12 3.664e-05 149 outer kinetochore of condensed chromosome amigo.geneontol...
GO GO:0003674 View Gene Set 4.285e-07 15462 3.817e-05 150 molecular_function amigo.geneontol...
GO GO:0016043 View Gene Set 4.348e-07 2937 3.847e-05 151 cellular component organization amigo.geneontol...
GO GO:0032446 View Gene Set 5.747e-07 310 5.04e-05 152 protein modification by small protein conjugation amigo.geneontol...
GO GO:0033036 View Gene Set 5.801e-07 1256 5.04e-05 152 macromolecule localization amigo.geneontol...
GO GO:0030554 View Gene Set 5.809e-07 1584 5.04e-05 152 adenyl nucleotide binding amigo.geneontol...
GO GO:0006323 View Gene Set 6.502e-07 119 5.604e-05 155 DNA packaging amigo.geneontol...
GO GO:0016818 View Gene Set 7.758e-07 765 6.644e-05 156 hydrolase activity acting on acid anhydrides in phosphorus-containing anhydrides amigo.geneontol...
GO GO:0008026 View Gene Set 9.506e-07 105 8.038e-05 157 ATP-dependent helicase activity amigo.geneontol...
GO GO:0070035 View Gene Set 9.506e-07 105 8.038e-05 157 purine NTP-dependent helicase activity amigo.geneontol...
GO GO:0016817 View Gene Set 1.012e-06 769 8.503e-05 159 hydrolase activity acting on acid anhydrides amigo.geneontol...
GO GO:0051028 View Gene Set 1.089e-06 90 9.095e-05 160 mRNA transport amigo.geneontol...
GO GO:0016462 View Gene Set 1.285e-06 762 0.0001067 161 pyrophosphatase activity amigo.geneontol...
GO GO:0044265 View Gene Set 1.561e-06 479 0.0001287 162 cellular macromolecule catabolic process amigo.geneontol...
GO GO:0008150 View Gene Set 1.635e-06 14318 0.000134 163 biological_process amigo.geneontol...
GO GO:0043933 View Gene Set 1.904e-06 836 0.0001551 164 macromolecular complex subunit organization amigo.geneontol...
GO GO:0010564 View Gene Set 2.097e-06 161 0.0001698 165 regulation of cell cycle process amigo.geneontol...
GO GO:0006886 View Gene Set 2.125e-06 439 0.0001711 166 intracellular protein transport amigo.geneontol...
GO GO:0065003 View Gene Set 2.196e-06 763 0.0001757 167 macromolecular complex assembly amigo.geneontol...
GO GO:0005815 View Gene Set 2.304e-06 277 0.0001832 168 microtubule organizing center amigo.geneontol...
GO GO:0070647 View Gene Set 2.34e-06 356 0.000185 169 protein modification by small protein conjugation or removal amigo.geneontol...
GO GO:0008757 View Gene Set 2.356e-06 91 0.0001852 170 S-adenosylmethionine-dependent methyltransferase activity amigo.geneontol...
GO GO:0005876 View Gene Set 2.478e-06 35 0.0001936 171 spindle microtubule amigo.geneontol...
GO GO:0051310 View Gene Set 2.936e-06 13 0.0002281 172 metaphase plate congression amigo.geneontol...
GO GO:0007346 View Gene Set 3.097e-06 174 0.0002392 173 regulation of mitotic cell cycle amigo.geneontol...
GO GO:0046930 View Gene Set 3.183e-06 85 0.0002444 174 pore complex amigo.geneontol...
GO GO:0033279 View Gene Set 3.584e-06 121 0.0002736 175 ribosomal subunit amigo.geneontol...
GO GO:0044419 View Gene Set 4.007e-06 343 0.0003041 176 interspecies interaction between organisms amigo.geneontol...
GO GO:0016607 View Gene Set 4.203e-06 116 0.0003172 177 nuclear speck amigo.geneontol...
GO GO:0016568 View Gene Set 4.383e-06 324 0.000329 178 chromatin modification amigo.geneontol...
GO GO:0032559 View Gene Set 4.426e-06 1503 0.0003304 179 adenyl ribonucleotide binding amigo.geneontol...
GO GO:0033554 View Gene Set 4.694e-06 698 0.0003484 180 cellular response to stress amigo.geneontol...
GO GO:0051656 View Gene Set 5e-06 71 0.0003691 181 establishment of organelle localization amigo.geneontol...
GO GO:0048193 View Gene Set 5.73e-06 137 0.0004192 182 Golgi vesicle transport amigo.geneontol...
GO GO:0005635 View Gene Set 5.761e-06 234 0.0004192 182 nuclear envelope amigo.geneontol...
GO GO:0016740 View Gene Set 5.773e-06 1691 0.0004192 182 transferase activity amigo.geneontol...
GO GO:0044455 View Gene Set 5.885e-06 133 0.000425 185 mitochondrial membrane part amigo.geneontol...
GO GO:0016570 View Gene Set 6.637e-06 162 0.0004767 186 histone modification amigo.geneontol...
GO GO:0016569 View Gene Set 8.433e-06 165 0.0005993 187 covalent chromatin modification amigo.geneontol...
GO GO:0004386 View Gene Set 8.413e-06 144 0.0005993 187 helicase activity amigo.geneontol...
GO GO:0006333 View Gene Set 8.562e-06 129 0.0006052 189 chromatin assembly or disassembly amigo.geneontol...
GO GO:0005524 View Gene Set 8.802e-06 1480 0.0006189 190 ATP binding amigo.geneontol...
GO GO:0006888 View Gene Set 9.34e-06 44 0.0006524 191 ER to Golgi vesicle-mediated transport amigo.geneontol...
GO GO:0019538 View Gene Set 9.376e-06 2935 0.0006524 191 protein metabolic process amigo.geneontol...
GO GO:0016779 View Gene Set 9.69e-06 120 0.0006708 193 nucleotidyltransferase activity amigo.geneontol...
GO GO:0000794 View Gene Set 1.021e-05 52 0.0007029 194 condensed nuclear chromosome amigo.geneontol...
GO GO:0006310 View Gene Set 1.091e-05 130 0.0007475 195 DNA recombination amigo.geneontol...
GO GO:0016567 View Gene Set 1.128e-05 286 0.0007689 196 protein ubiquitination amigo.geneontol...
GO GO:0016874 View Gene Set 1.274e-05 436 0.0008643 197 ligase activity amigo.geneontol...
GO GO:0045333 View Gene Set 1.297e-05 100 0.0008748 198 cellular respiration amigo.geneontol...
GO GO:0017111 View Gene Set 1.372e-05 733 0.000921 199 nucleoside-triphosphatase activity amigo.geneontol...
GO GO:0031577 View Gene Set 1.614e-05 17 0.001078 200 spindle checkpoint amigo.geneontol...

Gene Set Collection: Broad.c1.CYTOBAND

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad chr5q22 View Gene Set 0.000141 23 0.04597 1 Genes in cytogenetic band chr5q22 www.broad.mit.e...

Gene Set Collection: Broad.c2.CGP

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad KINSEY_TARGETS_OF_EWSR1_FLII_FUSION_UP View Gene Set 3.675e-68 1180 8.79e-65 1 Genes up-regulated in TC71 and EWS502 cells (Ewing's sarcoma) upon knockdown of the EWSR1-FLII fusion [Gene ID=2130 2314]. www.broad.mit.e...
Broad PUJANA_CHEK2_PCC_NETWORK View Gene Set 8.735e-67 744 1.045e-63 2 Genes constituting the CHEK2-PCC network of transcripts whose expression positively correlates (Pearson correlation coefficient PCC >= 0.4) with that of CHEK2 [Gene ID=11200]. www.broad.mit.e...
Broad PUJANA_BRCA1_PCC_NETWORK View Gene Set 9.421e-61 1582 7.512e-58 3 Genes constituting the BRCA1-PCC network of transcripts whose expression positively correlated (Pearson correlation coefficient PCC >= 0.4) with that of BRCA1 [Gene ID=672] across a compendium of normal tissues. www.broad.mit.e...
Broad CAIRO_HEPATOBLASTOMA_CLASSES_UP View Gene Set 1.59e-58 577 9.507e-56 4 Genes up-regulated in robust Cluster 2 (rC2) of hepatoblastoma samples compared to those in the robust Cluster 1 (rC1). www.broad.mit.e...
Broad DODD_NASOPHARYNGEAL_CARCINOMA_DN View Gene Set 5.16e-57 1253 2.469e-54 5 Genes down-regulated in nasopharyngeal carcinoma (NPC) compared to the normal tissue. www.broad.mit.e...
Broad WEI_MYCN_TARGETS_WITH_E_BOX View Gene Set 1.996e-54 757 7.959e-52 6 Genes whose promoters contain E-box motifs and whose expression changed in MYCN-3 cells (neuroblastoma) upon induction of MYCN [Gene ID=4613]. www.broad.mit.e...
Broad KRIGE_RESPONSE_TO_TOSEDOSTAT_24HR_DN View Gene Set 1.824e-52 920 6.232e-50 7 Genes down-regulated in HL-60 cells (acute promyelocytic leukemia APL) after treatment with the aminopeptidase inhibitor tosedostat (CHR-2797) [PubChem=15547703] for 24 h. www.broad.mit.e...
Broad MANALO_HYPOXIA_DN View Gene Set 8.613e-51 276 2.575e-48 8 Genes down-regulated in response to both hypoxia and overexpression of an active form of HIF1A [Gene ID=3091]. www.broad.mit.e...
Broad DIAZ_CHRONIC_MEYLOGENOUS_LEUKEMIA_UP View Gene Set 1.68e-47 1353 4.465e-45 9 Genes up-regulated in CD34+ [Gene ID=947] cells isolated from bone marrow of CML (chronic myelogenous leukemia) patients compared to those from normal donors. www.broad.mit.e...
Broad NUYTTEN_EZH2_TARGETS_DN View Gene Set 1.311e-46 859 3.135e-44 10 Genes down-regulated in PC3 cells (prostate cancer) after knockdown of EZH2 [Gene ID=2146] by RNAi. www.broad.mit.e...
Broad KOBAYASHI_EGFR_SIGNALING_24HR_DN View Gene Set 1.057e-41 243 2.299e-39 11 Genes down-regulated in H1975 cells (non-small cell lung cancer NSCLC) resistant to gefitinib [PubChem=123631] after treatment with EGFR inhibitor CL-387785 [PubChem=2776] for 24h. www.broad.mit.e...
Broad TIEN_INTESTINE_PROBIOTICS_24HR_UP View Gene Set 1.231e-41 537 2.453e-39 12 Genes up-regulated in Caco-2 cells (intestinal epithelium) after coculture with the probiotic bacteria L. casei for 24h. www.broad.mit.e...
Broad SHEDDEN_LUNG_CANCER_POOR_SURVIVAL_A6 View Gene Set 3.904e-41 435 7.183e-39 13 Cluster 6 of method A: up-regulation of these genes in patients with non???small cell lung cancer (NSCLC) predicts poor survival outcome. www.broad.mit.e...
Broad SOTIRIOU_BREAST_CANCER_GRADE_1_VS_3_UP View Gene Set 1.308e-40 143 2.235e-38 14 Up-regulated genes whose expression correlated with histologic grade of invasive breast cancer tumors: comparison of grade 1 vs grade 3. www.broad.mit.e...
Broad KRIGE_RESPONSE_TO_TOSEDOSTAT_6HR_DN View Gene Set 9.056e-40 832 1.444e-37 15 Genes down-regulated in HL-60 cells (acute promyelocytic leukemia APL) after treatment with the aminopeptidase inhibitor tosedostat (CHR-2797) [PubChem=15547703] for 6 h. www.broad.mit.e...
Broad ROSTY_CERVICAL_CANCER_PROLIFERATION_CLUSTER View Gene Set 4.88e-38 138 7.296e-36 16 The 'Cervical Cancer Proliferation Cluster' (CCPC): genes whose expression in cervical carcinoma positively correlates with that of the HPV E6 and E7 oncogenes; they are also differentially expressed according to disease outcome. www.broad.mit.e...
Broad BENPORATH_CYCLING_GENES View Gene Set 1.249e-37 630 1.757e-35 17 Genes showing cell-cycle stage-specific expression [PMID=12058064]. www.broad.mit.e...
Broad WONG_EMBRYONIC_STEM_CELL_CORE View Gene Set 1.548e-37 331 2.057e-35 18 The 'core ESC-like gene module': genes coordinately up-regulated in a compendium of mouse embryonic stem cells (ESC) which are shared with the human ESC-like module. www.broad.mit.e...
Broad RODRIGUES_THYROID_CARCINOMA_POORLY_DIFFERENTIATED_UP View Gene Set 1.9e-37 589 2.392e-35 19 Genes up-regulated in poorly differentiated thyroid carcinoma (PDTC) compared to normal thyroid tissue. www.broad.mit.e...
Broad HORIUCHI_WTAP_TARGETS_DN View Gene Set 9.426e-33 289 1.127e-30 20 Genes down-regulated in primary endothelial cells (HUVEC) after knockdown of WTAP [Gene ID=9589] by RNAi. www.broad.mit.e...
Broad GARY_CD5_TARGETS_DN View Gene Set 3.302e-32 415 3.761e-30 21 Genes down-regulated in Daudi cells (B lymphocytes) stably expressing CD5 [Gene ID=921] off a plasmid vector. www.broad.mit.e...
Broad PUJANA_BRCA2_PCC_NETWORK View Gene Set 4.517e-30 410 4.911e-28 22 Genes constituting the BRCA2-PCC network of transcripts whose expression positively correlated (Pearson correlation coefficient PCC >= 0.4) with that of BRCA2 [Gene ID=675] across a compendium of normal tissues. www.broad.mit.e...
Broad BERENJENO_TRANSFORMED_BY_RHOA_UP View Gene Set 1.814e-29 485 1.887e-27 23 Genes up-regulated in NIH3T3 cells (fibroblasts) transformed by expression of contitutively active (Q63L) form of RHOA [Gene ID=387] off plasmid vector. www.broad.mit.e...
Broad CASORELLI_ACUTE_PROMYELOCYTIC_LEUKEMIA_DN View Gene Set 7.886e-29 639 7.859e-27 24 Genes down-regulated in APL (acute promyeolocytic leukemia) blasts expressing PML-RARA fusion [Gene ID=5371 5914] compared to normal promyeloblasts. www.broad.mit.e...
Broad GEORGES_TARGETS_OF_MIR192_AND_MIR215 View Gene Set 6.636e-28 809 6.349e-26 25 Genes down-regulated in HCT116 cells (colon cancer) by expression of MIR192 or MIR215 [Gene ID=406967 406997] at 24 h. www.broad.mit.e...
Broad WINNEPENNINCKX_MELANOMA_METASTASIS_UP View Gene Set 6.599e-27 152 6.071e-25 26 Genes from the 254-gene classifier which were up-regulated in melanoma patients with a reported distant metastasis within 4 years. www.broad.mit.e...
Broad GRAHAM_CML_DIVIDING_VS_NORMAL_QUIESCENT_UP View Gene Set 1.943e-26 180 1.721e-24 27 Genes up-regulated in quiescent CD34+ [Gene ID=8842] cells isolated from peripheral blood of normal donors compared to the dividing cells from CML (chronic myeloid leukemia) patients. www.broad.mit.e...
Broad LINDGREN_BLADDER_CANCER_CLUSTER_3_UP View Gene Set 9.744e-26 314 8.324e-24 28 Genes whose expression profile is specific to Cluster III of urothelial cell carcinoma (UCC) tumors. www.broad.mit.e...
Broad FOURNIER_ACINAR_DEVELOPMENT_LATE_2 View Gene Set 2.249e-25 265 1.855e-23 29 Genes identified by method 2 as coordinately down-regulated late in HMEC cells (mammary epithelium) during acinar development in vitro. www.broad.mit.e...
Broad ZHANG_BREAST_CANCER_PROGENITORS_UP View Gene Set 5.718e-25 370 4.559e-23 30 Genes changed in cancer stem cells isolated from mammary tumors compared to the non-tumorigenic cells. www.broad.mit.e...
Broad VECCHI_GASTRIC_CANCER_EARLY_UP View Gene Set 2.752e-24 408 2.123e-22 31 Up-regulated genes distinguishing between early gastric cancer (EGC) and normal tissue samples. www.broad.mit.e...
Broad BLUM_RESPONSE_TO_SALIRASIB_DN View Gene Set 1.113e-22 332 8.322e-21 32 Selected genes down-regulated in response to the Ras inhibitor salirasib [PubChem=5469318] in a panel of cancer cell lines with constantly active HRAS [Gene ID=3265]. www.broad.mit.e...
Broad ACEVEDO_LIVER_TUMOR_VS_NORMAL_ADJACENT_TISSUE_UP View Gene Set 1.214e-22 806 8.8e-21 33 Genes up-regulated in liver tumor compared to the normal adjacent tissue. www.broad.mit.e...
Broad MILI_PSEUDOPODIA_HAPTOTAXIS_UP View Gene Set 3.248e-22 452 2.285e-20 34 Transcripts enriched in pseudopodia of NIH/3T3 cells (fibroblast) in response to haptotactic migratory stimulus by fibronectin FN1 [Gene ID=2335]. www.broad.mit.e...
Broad PUJANA_XPRSS_INT_NETWORK View Gene Set 6.425e-22 164 4.391e-20 35 Genes constituting the XPRSS-Int network: intersection of genes whose expression correlates with BRCA1 BRCA2 ATM and CHEK2 [Gene ID=672 675 472 11200] in a compendium of normal tissues. www.broad.mit.e...
Broad WHITEFORD_PEDIATRIC_CANCER_MARKERS View Gene Set 2.197e-21 92 1.46e-19 36 Differentially expressed genes in a panel of xenografts representing 8 common pediatric tumors compared to the normal tissues. www.broad.mit.e...
Broad DANG_BOUND_BY_MYC View Gene Set 4.293e-21 1045 2.775e-19 37 Genes whose promoters are bound by MYC [Gene ID=4609] according to MYC Target Gene Database. www.broad.mit.e...
Broad MITSIADES_RESPONSE_TO_APLIDIN_DN View Gene Set 4.811e-21 241 3.029e-19 38 Genes down-regulated in the MM1S cells (multiple myeloma) after treatment with aplidin [PubChem=44152164] a marine-derived compound with potential anti-cancer properties. www.broad.mit.e...
Broad TOYOTA_TARGETS_OF_MIR34B_AND_MIR34C View Gene Set 6.071e-21 436 3.724e-19 39 Genes down-regulated in HCT116 cells (colon cancer) upon expression of MIR34B or MIR34C [Gene ID=407041 407042] microRNAs. www.broad.mit.e...
Broad BASAKI_YBX1_TARGETS_UP View Gene Set 1.875e-20 279 1.121e-18 40 Genes up-regulated in SKOC-3 cells (ovarian cancer) after YB-1 (YBX1) [Gene ID=4904] knockdown by RNAi. www.broad.mit.e...
Broad ODONNELL_TFRC_TARGETS_DN View Gene Set 1.269e-19 131 7.402e-18 41 Genes dpwn-regulated in P493-6 cells (B lymphocyte) upon knockdown of TFRC [Gene ID=7037] by RNAi. www.broad.mit.e...
Broad RODRIGUES_THYROID_CARCINOMA_ANAPLASTIC_UP View Gene Set 1.679e-19 681 9.563e-18 42 Genes up-regulated in anaplastic thyroid carcinoma (ATC) compared to normal thyroid tissue. www.broad.mit.e...
Broad BIDUS_METASTASIS_UP View Gene Set 1.827e-19 203 1.016e-17 43 Genes up-regulated in endometroid endometrial tumors from patients with lymph node metastases compared to those without the metastases. www.broad.mit.e...
Broad CROONQUIST_IL6_DEPRIVATION_DN View Gene Set 2.453e-19 80 1.333e-17 44 Genes down-regulated in the ANBL-6 cell line (multiple myeloma MM) after withdrawal of IL6 [Gene ID=3569]. www.broad.mit.e...
Broad ZHAN_MULTIPLE_MYELOMA_PR_UP View Gene Set 4.84e-19 43 2.573e-17 45 Top 50 up-regulated genes in cluster PR of multiple myeloma samples characterized by increased expression of proliferation and cell cycle genes. www.broad.mit.e...
Broad GRAHAM_NORMAL_QUIESCENT_VS_NORMAL_DIVIDING_DN View Gene Set 8.914e-19 86 4.635e-17 46 Genes down-regulated in quiescent vs dividing CD34+ [Gene ID=8842] cells isolated from peripheral blood of normal donors. www.broad.mit.e...
Broad FERREIRA_EWINGS_SARCOMA_UNSTABLE_VS_STABLE_UP View Gene Set 1.163e-18 144 5.918e-17 47 Genes up-regulated in genomically unstable Ewing's sarcoma tumors compared to the stable ones. www.broad.mit.e...
Broad BENPORATH_MYC_MAX_TARGETS View Gene Set 1.41e-18 768 6.967e-17 48 Set 'Myc targets2': targets of c-Myc [Gene ID=4609] and Max [Gene ID=4149] identified by ChIP on chip in a Burkitt???s lymphoma cell line; overlap set. www.broad.mit.e...
Broad TARTE_PLASMA_CELL_VS_PLASMABLAST_DN View Gene Set 1.427e-18 303 6.967e-17 48 Genes down-regulated in mature plasma cells compared with plasmablastic B lymphocytes. www.broad.mit.e...
Broad MUELLER_PLURINET View Gene Set 1.632e-18 294 7.809e-17 50 Genes constituting the PluriNet protein-protein network shared by the pluripotent cells (embryonic stem cells embryonical carcinomas and induced pluripotent cells). www.broad.mit.e...
Broad BUYTAERT_PHOTODYNAMIC_THERAPY_STRESS_DN View Gene Set 4.089e-18 599 1.918e-16 51 Genes down-regulated in T24 (bladder cancer) cells in response to the photodynamic therapy (PDT) stress. www.broad.mit.e...
Broad ACEVEDO_LIVER_CANCER_UP View Gene Set 5.105e-18 915 2.348e-16 52 Genes up-regulated in hepatocellular carcinoma (HCC) compared to normal liver samples. www.broad.mit.e...
Broad PUJANA_ATM_PCC_NETWORK View Gene Set 9.167e-18 1375 4.137e-16 53 Genes constituting the ATM-PCC network of transcripts whose expression positively correlated (Pearson correlation coefficient PCC >= 0.4) with that of ATM [Gene ID=472] across a compendium of normal tissues. www.broad.mit.e...
Broad MARKEY_RB1_ACUTE_LOF_DN View Gene Set 1.245e-17 201 5.515e-16 54 Genes down-regulated in adult fibroblasts with inactivated RB1 [Gene ID=5925] by Cre-lox: acute loss of function (LOF) of RB1. www.broad.mit.e...
Broad CHANG_CYCLING_GENES View Gene Set 1.378e-17 49 5.993e-16 55 Fibroblast serum response genes showing periodic expression during the cell cycle; excluded from the core serum response signature. www.broad.mit.e...
Broad CROONQUIST_NRAS_SIGNALING_DN View Gene Set 4.024e-17 62 1.719e-15 56 Genes down-regulated in ANBL-6 cell line (multiple myeloma MM) expressing a constantly active form of NRAS [Gene ID=4893] off a plasmid vector compared to those grown in the presence of IL6 [Gene ID=3569]. www.broad.mit.e...
Broad BENPORATH_ES_1 View Gene Set 1.375e-16 367 5.771e-15 57 Set 'ES exp1': genes overexpressed in human embryonic stem cells according to 5 or more out of 20 profiling studies. www.broad.mit.e...
Broad BENPORATH_PROLIFERATION View Gene Set 1.409e-16 140 5.81e-15 58 Set 'Proliferation Cluster': genes defined in human breast tumor expression data. www.broad.mit.e...
Broad ENK_UV_RESPONSE_KERATINOCYTE_DN View Gene Set 1.543e-16 475 6.255e-15 59 Genes down-regulated in NHEK cells (normal epidermal keratinocytes) after UVB irradiation. www.broad.mit.e...
Broad FUJII_YBX1_TARGETS_DN View Gene Set 1.908e-16 139 7.608e-15 60 Genes down-regulated in MCF-7 cells (breast cancer) after knockdown of YBX1 [Gene ID=4904] by RNAi. www.broad.mit.e...
Broad RHEIN_ALL_GLUCOCORTICOID_THERAPY_DN View Gene Set 2.331e-16 351 9.14e-15 61 Genes down-regulated in ALL (acute lymphoblastic leukemia) blasts after 1 week of treatment with glucocorticoids. www.broad.mit.e...
Broad BORCZUK_MALIGNANT_MESOTHELIOMA_UP View Gene Set 2.433e-16 290 9.298e-15 62 Genes up-regulated in biphasic (mixed) vs epithelial subtypes of malignant peritoneal mesothelioma. www.broad.mit.e...
Broad FARMER_BREAST_CANCER_CLUSTER_2 View Gene Set 2.449e-16 33 9.298e-15 62 Cluster 2: selected proliferation and 8q amplicon genes clustered together across breast cancer samples. www.broad.mit.e...
Broad KANG_DOXORUBICIN_RESISTANCE_UP View Gene Set 3.223e-16 53 1.204e-14 64 Genes differentialy expressed in gastric cancer cell lines: doxorubicin [PubChem=31703] resistant vs sensitive. www.broad.mit.e...
Broad LI_WILMS_TUMOR_VS_FETAL_KIDNEY_1_DN View Gene Set 3.844e-16 158 1.415e-14 65 Genes down-regulated in Wilm's tumor samples compared to fetal kidney. www.broad.mit.e...
Broad MORI_LARGE_PRE_BII_LYMPHOCYTE_UP View Gene Set 5.809e-16 52 2.105e-14 66 Up-regulated genes in the B lymphocyte developmental signature based on expression profiling of lymphomas from the Emu-myc transgenic mice: the Large Pre-BII stage. www.broad.mit.e...
Broad BOYAULT_LIVER_CANCER_SUBCLASS_G3_UP View Gene Set 8.929e-16 184 3.188e-14 67 Up-regulated genes in hepatocellular carcinoma (HCC) subclass G3 defined by unsupervised clustering. www.broad.mit.e...
Broad SCHLOSSER_MYC_TARGETS_REPRESSED_BY_SERUM View Gene Set 1.563e-15 154 5.499e-14 68 Cluster 7: genes up-regulated in B493-6 cells (B lymphocytes) by MYC [Gene ID=4609] and down-regulated by the combination of MYC and serum. www.broad.mit.e...
Broad MORI_IMMATURE_B_LYMPHOCYTE_DN View Gene Set 7.768e-15 52 2.693e-13 69 Down-regulated genes in the B lymphocyte developmental signature based on expression profiling of lymphomas from the Emu-myc transgenic mice: the immature B stage. www.broad.mit.e...
Broad LEE_EARLY_T_LYMPHOCYTE_UP View Gene Set 9.582e-15 80 3.274e-13 70 Genes up-regulated at early stages of progenitor T lymphocyte maturation compared to the late stages. www.broad.mit.e...
Broad KIM_WT1_TARGETS_DN View Gene Set 1.771e-14 431 5.968e-13 71 Genes down-regulated in UB27 cells (osteosarcoma) at any time point after inducing the expression of a mutant form of WT1 [Gene ID=7490]. www.broad.mit.e...
Broad MISSIAGLIA_REGULATED_BY_METHYLATION_DN View Gene Set 1.889e-14 96 6.275e-13 72 Genes down-regulated in PaCa44 and CFPAC1 cells (pancreatic cancer) after treatment with decitabine [PubChem=451668] a DNA hypomethylating agent similar to azacitidine [PubChem=9444]. www.broad.mit.e...
Broad ELVIDGE_HYPOXIA_DN View Gene Set 3.364e-14 136 1.087e-12 73 Genes down-regulated in MCF7 cells (breast cancer) under hypoxia conditions. www.broad.mit.e...
Broad HOFFMANN_LARGE_TO_SMALL_PRE_BII_LYMPHOCYTE_UP View Gene Set 3.323e-14 93 1.087e-12 73 Genes up-regulated during differentiation from large pre-BII to small pre-BII lymphocyte. www.broad.mit.e...
Broad AMUNDSON_GAMMA_RADIATION_RESPONSE View Gene Set 7.154e-14 36 2.282e-12 75 Genes down-regulated across the entire panel of NCI-60 cell lines in response to gamma radiation. www.broad.mit.e...
Broad BENPORATH_NANOG_TARGETS View Gene Set 7.375e-14 946 2.321e-12 76 Set 'Nanog targets': genes upregulated and identified by ChIP on chip as Nanog [Gene ID=79923] transcription factor targets in human embryonic stem cells. www.broad.mit.e...
Broad SHEN_SMARCA2_TARGETS_UP View Gene Set 8.153e-14 406 2.533e-12 77 Genes whose expression positively correlated with that of SMARCA2 [Gene ID=6595] in prostate cancer samples. www.broad.mit.e...
Broad CHIANG_LIVER_CANCER_SUBCLASS_PROLIFERATION_UP View Gene Set 1.371e-13 135 4.206e-12 78 Top 200 marker genes up-regulated in the 'proliferation' subclass of hepatocellular carcinoma (HCC); characterized by increased proliferation high levels of serum AFP [Gene ID=174] and chromosomal instability. www.broad.mit.e...
Broad PUJANA_BRCA_CENTERED_NETWORK View Gene Set 1.802e-13 92 5.456e-12 79 Genes constituting the BRCA-centered network (BCN). www.broad.mit.e...
Broad RUIZ_TNC_TARGETS_DN View Gene Set 2.411e-13 138 7.208e-12 80 Genes down-regulated in T98G cells (glioblastoma) by TNC [Gene ID=3371]. www.broad.mit.e...
Broad MOOTHA_MITOCHONDRIA View Gene Set 2.869e-13 433 8.472e-12 81 Mitochondrial genes www.broad.mit.e...
Broad LE_EGR2_TARGETS_UP View Gene Set 2.93e-13 100 8.547e-12 82 Genes up-regulated in P14 nerves of transgenic mice having hypomorhic (reduced function) allele of EGR2 [Gene ID=1959]. www.broad.mit.e...
Broad MOLENAAR_TARGETS_OF_CCND1_AND_CDK4_DN View Gene Set 4.043e-13 53 1.165e-11 83 Genes commonly down-regulated in SK-N-BE cells (neuroblastoma) after RNAi knockdown of CCND1 and CDK4 [Gene ID=595 1019]. www.broad.mit.e...
Broad PAL_PRMT5_TARGETS_UP View Gene Set 5.064e-13 178 1.442e-11 84 Genes up-regulated in NIH-3T3 cells (fibroblast) after knockdown of PRMT5 [Gene ID=10419] by RNAi. www.broad.mit.e...
Broad WELCSH_BRCA1_TARGETS_1_DN View Gene Set 1.058e-12 124 2.942e-11 85 Upregulated by induction of exogenous BRCA1 in EcR-293 cells www.broad.mit.e...
Broad MOOTHA_HUMAN_MITODB_6_2002 View Gene Set 1.057e-12 420 2.942e-11 85 Mitochondrial genes; based on literature and sequence annotation resources and converted to Affymetrix HG-U133A probe sets. www.broad.mit.e...
Broad BLALOCK_ALZHEIMERS_DISEASE_DN View Gene Set 2.606e-12 1209 7.166e-11 87 Genes down-regulated in brain from patients with Alzheimer's disease. www.broad.mit.e...
Broad LASTOWSKA_NEUROBLASTOMA_COPY_NUMBER_DN View Gene Set 3.588e-12 742 9.752e-11 88 Genes with copy number losses in primary neuroblastoma tumors. www.broad.mit.e...
Broad YU_MYC_TARGETS_UP View Gene Set 3.697e-12 37 9.936e-11 89 Genes up-regulated in B cell lymphoma tumors expressing an activated form of MYC [Gene ID=4609]. www.broad.mit.e...
Broad CHIANG_LIVER_CANCER_SUBCLASS_UNANNOTATED_DN View Gene Set 3.832e-12 155 1.018e-10 90 Marker genes down-regulated in the 'unannotated' subclass of hepatocellular carcinoma (HCC) samples. www.broad.mit.e...
Broad SPIELMAN_LYMPHOBLAST_EUROPEAN_VS_ASIAN_UP View Gene Set 6.183e-12 469 1.625e-10 91 Genes up-regulated in lymphoblastoid cells from the European population compared to those from the Asian population. www.broad.mit.e...
Broad CHEMNITZ_RESPONSE_TO_PROSTAGLANDIN_E2_UP View Gene Set 9.58e-12 135 2.491e-10 92 Genes up-regulated in CD4+ [Gene ID=920] T lymphocytes after stimulation with prostaglandin E2 [PubChem=5280360]. www.broad.mit.e...
Broad FRASOR_RESPONSE_TO_SERM_OR_FULVESTRANT_DN View Gene Set 1.779e-11 43 4.576e-10 93 Genes down-regulated in MCF-7 cells (breast cancer) by selective estrogen receptor modulators (SERM) 4-hydroxytamoxifen raloxifene or ICI 182780 but not by estradiol [PubChem=44959 5035 3478439 5757]. www.broad.mit.e...
Broad GARCIA_TARGETS_OF_FLI1_AND_DAX1_DN View Gene Set 2.025e-11 148 5.152e-10 94 Genes down-regulated in the A673 cells (Ewing sarcoma) after double knockdown of both FLI1 and DAX1 [Gene ID=2313 190] by RNAi. www.broad.mit.e...
Broad FURUKAWA_DUSP6_TARGETS_PCI35_DN View Gene Set 2.232e-11 66 5.619e-10 95 Genes down-regulated in PCI-35 cells (pancreatic cancer lack endogenous DUSP6 [Gene ID=1848]) upon expression of DUSP6 off an adenoviral vector. www.broad.mit.e...
Broad VANTVEER_BREAST_CANCER_METASTASIS_DN View Gene Set 3.464e-11 104 8.542e-10 96 Genes whose expression is significantly and negatively correlated with poor breast cancer clinical outcome (defined as developing distant metastases in less than 5 years). www.broad.mit.e...
Broad PENG_GLUTAMINE_DEPRIVATION_DN View Gene Set 3.442e-11 84 8.542e-10 96 Genes down-regulated in BJAB cells (B-lymphoma) after glutamine [PubChem=738] deprivation. www.broad.mit.e...
Broad SCHLOSSER_MYC_TARGETS_AND_SERUM_RESPONSE_DN View Gene Set 3.678e-11 46 8.977e-10 98 Cluster 6: genes down-regulated in B493-6 cells (B lymphocytes) by MYC [Gene ID=4609] in combination with serum but not affected by serum alone; they are also up-regulated by MYC alone. www.broad.mit.e...
Broad DACOSTA_UV_RESPONSE_VIA_ERCC3_DN View Gene Set 4.587e-11 825 1.108e-09 99 Genes down-regulated in fibroblasts expressing mutant forms of ERCC3 [Gene ID=2071] after UV irradiation. www.broad.mit.e...
Broad SCHUHMACHER_MYC_TARGETS_UP View Gene Set 4.879e-11 68 1.167e-09 100 Genes up-regulated in P493-6 cells (Burkitt's lymphoma) induced to express MYC [Gene ID=4609]. www.broad.mit.e...
Broad DANG_MYC_TARGETS_UP View Gene Set 5.37e-11 127 1.272e-09 101 Genes up-regulated by MYC [Gene ID=4609] and whose promoters are bound by MYC according to MYC Target Gene Database. www.broad.mit.e...
Broad SCHLOSSER_SERUM_RESPONSE_DN View Gene Set 5.644e-11 666 1.324e-09 102 Cluster 4: genes down-regulated in B493-6 cells (B lymphocytes) upon serum stimulation but not affected by MYC [Gene ID=4609]. www.broad.mit.e...
Broad KAUFFMANN_MELANOMA_RELAPSE_UP View Gene Set 7.092e-11 57 1.647e-09 103 DNA repair and replication genes up-regulated in melanoma patients who will relapse vs patients who will not. www.broad.mit.e...
Broad PUJANA_BREAST_CANCER_WITH_BRCA1_MUTATED_UP View Gene Set 7.478e-11 53 1.72e-09 104 The XPRSS-Int network genes up-regulated in breast tumors from patients with germline mutations in BRCA1 [Gene ID=672] compared to those with the wild type allele. www.broad.mit.e...
Broad ELVIDGE_HIF1A_TARGETS_UP View Gene Set 9.465e-11 64 2.156e-09 105 Genes up-regulated in MCF7 cells (breast cancer) after knockdown of HIF1A [Gene ID=3091] by RNAi. www.broad.mit.e...
Broad EGUCHI_CELL_CYCLE_RB1_TARGETS View Gene Set 9.789e-11 19 2.209e-09 106 RB1 [Gene ID=5925] target genes involved in cell cycle regulation: genes down-regulated by doxorubicin [PubChem=31703] only in cells expressing RB1. www.broad.mit.e...
Broad REN_BOUND_BY_E2F View Gene Set 1.377e-10 47 3.079e-09 107 Genes whose promoters were bound by E2F1 [Gene ID=1869] and E2F4 [Gene ID=1874] in the primary fibroblasts WI-38 by ChIP on chip assay. www.broad.mit.e...
Broad MARTINEZ_RESPONSE_TO_TRABECTEDIN_DN View Gene Set 1.478e-10 212 3.273e-09 108 Genes down-regulated in at least 8 of 11 sarcoma cell lines by trabectedin [PubChem=3199]. www.broad.mit.e...
Broad WONG_MITOCHONDRIA_GENE_MODULE View Gene Set 2.15e-10 208 4.718e-09 109 Genes that comprise the mitochondria gene module www.broad.mit.e...
Broad BENPORATH_SOX2_TARGETS View Gene Set 2.452e-10 704 5.331e-09 110 Set 'Sox2 targets': genes upregulated and identified by ChIP on chip as SOX2 [Gene ID=6657] transcription factor targets in human embryonic stem cells. www.broad.mit.e...
Broad SPIELMAN_LYMPHOBLAST_EUROPEAN_VS_ASIAN_DN View Gene Set 4.237e-10 571 9.131e-09 111 Genes down-regulated in lymphoblastoid cells from the European population compared to those from the Asian population. www.broad.mit.e...
Broad LY_AGING_MIDDLE_DN View Gene Set 4.419e-10 15 9.437e-09 112 Genes down-regulated in fibroblasts from middle-age individuals compared to those from the young donors. www.broad.mit.e...
Broad MONNIER_POSTRADIATION_TUMOR_ESCAPE_UP View Gene Set 4.625e-10 359 9.79e-09 113 The postradiation tumor escape signature: genes up-regulated in tumors from irradiated stroma vs those from non-irradiated stroma. www.broad.mit.e...
Broad YAO_TEMPORAL_RESPONSE_TO_PROGESTERONE_CLUSTER_11 View Gene Set 7.142e-10 93 1.498e-08 114 Genes co-regulated in uterus during a time course response to progesterone [PubChem=5994]: SOM cluster 11. www.broad.mit.e...
Broad WANG_SMARCE1_TARGETS_DN View Gene Set 8.676e-10 329 1.805e-08 115 Genes down-regulated in BT549 cells (breast cancer) by expression of SMARCE1 [Gene ID=6605] off a retroviral vector. www.broad.mit.e...
Broad RAMALHO_STEMNESS_UP View Gene Set 9.89e-10 192 2.039e-08 116 Genes enriched in embryonic neural and hematopoietic stem cells. www.broad.mit.e...
Broad GARGALOVIC_RESPONSE_TO_OXIDIZED_PHOSPHOLIPIDS_TURQUOISE_DN View Gene Set 2.245e-09 51 4.59e-08 117 Genes from the turquoise module which are down-regulated in HAEC cells (primary aortic endothelium) after exposure to the oxidized 1-palmitoyl-2-arachidonyl-sn-3-glycerophosphocholine (oxPAPC). www.broad.mit.e...
Broad KAUFFMANN_DNA_REPLICATION_GENES View Gene Set 2.517e-09 128 5.102e-08 118 Genes involved in DNA replication compiled manually by the authors. www.broad.mit.e...
Broad MOREAUX_MULTIPLE_MYELOMA_BY_TACI_DN View Gene Set 3.134e-09 121 6.299e-08 119 Genes distinguishing in multiple myeloma (MM) samples with lower expression of TACI [Gene ID=23495]. www.broad.mit.e...
Broad MOHANKUMAR_TLX1_TARGETS_UP View Gene Set 3.743e-09 388 7.461e-08 120 Up-regulated in MCF7 cells (breast cancer) by TLX1 (HOX11) [Gene ID=3195]. www.broad.mit.e...
Broad CREIGHTON_ENDOCRINE_THERAPY_RESISTANCE_1 View Gene Set 4.521e-09 491 8.937e-08 121 The 'group 1 set' of genes associated with acquired endocrine therapy resistance in breast tumors expressing ESR1 and ERBB2 [Gene ID=2099 2064]. www.broad.mit.e...
Broad WEST_ADRENOCORTICAL_TUMOR_UP View Gene Set 4.6e-09 283 9.019e-08 122 Up-regulated genes in pediatric adrenocortical tumors (ACT) compared to the normal tissue. www.broad.mit.e...
Broad PUJANA_BREAST_CANCER_LIT_INT_NETWORK View Gene Set 6.029e-09 100 1.172e-07 123 Genes constituting the LIT-Int network of proteins interacting with breast cancer reference proteins BRCA1 BRCA2 ATM and CHEK2 [Gene ID=672 675 472 11200]; the interactions were manually curated from the literature. www.broad.mit.e...
Broad STARK_PREFRONTAL_CORTEX_22Q11_DELETION_DN View Gene Set 6.648e-09 437 1.282e-07 124 Genes down-regulated in prefrontal cortex (PFC) of mice carrying a hemizygotic microdeletion in the 22q11.2 region. www.broad.mit.e...
Broad SCIAN_CELL_CYCLE_TARGETS_OF_TP53_AND_TP73_DN View Gene Set 6.762e-09 22 1.294e-07 125 Cell cycle genes changed in H1299 cells (lung cancer) after overexpression of either P53 [Gene ID=7157] or P73 [Gene ID=7161]. www.broad.mit.e...
Broad NELSON_RESPONSE_TO_ANDROGEN_UP View Gene Set 8.538e-09 81 1.621e-07 126 Genes up-regulated in LNCaP cells (prostate cancer) in response to synthetic androgen R1881 [PubChem=13766]. www.broad.mit.e...
Broad ODONNELL_TARGETS_OF_MYC_AND_TFRC_DN View Gene Set 9.391e-09 42 1.769e-07 127 Genes down-regulated in P493-6 cells (B lymphocyte) by MYC [Gene ID=4609] and up-regulated by RNAi knockdown of TFRC [Gene ID=7037]. www.broad.mit.e...
Broad NUYTTEN_NIPP1_TARGETS_DN View Gene Set 1.295e-08 758 2.42e-07 128 Genes down-regulated in PC3 cells (prostate cancer) after knockdown of NIPP1 [Gene ID=5511] by RNAi. www.broad.mit.e...
Broad UDAYAKUMAR_MED1_TARGETS_UP View Gene Set 2.021e-08 129 3.735e-07 129 Genes up-regulated in HeLa cells after knockdown of MED1 [Gene ID=5469] by RNAi. www.broad.mit.e...
Broad OUELLET_OVARIAN_CANCER_INVASIVE_VS_LMP_UP View Gene Set 2.03e-08 114 3.735e-07 129 Genes up-regulated in epithelial ovarian cancer (EOC) biopsies: invasive (TOV) vs low malignant potential (LMP) tumors. www.broad.mit.e...
Broad LY_AGING_OLD_DN View Gene Set 2.087e-08 47 3.811e-07 131 Genes up-regulated in fibroblasts from old individuals compared to those from young donors. www.broad.mit.e...
Broad SONG_TARGETS_OF_IE86_CMV_PROTEIN View Gene Set 2.157e-08 49 3.909e-07 132 Cellular genes up-regulated in forskin fibroblasts by expression of CMV EI86 protein off an adenovirus vector. www.broad.mit.e...
Broad RHODES_UNDIFFERENTIATED_CANCER View Gene Set 2.435e-08 60 4.379e-07 133 Genes commonly up-regulated in undifferentiated cancer relative to well-differentiated cancer based on the meta-analysis of the OncoMine gene expression database. www.broad.mit.e...
Broad FLECHNER_BIOPSY_KIDNEY_TRANSPLANT_OK_VS_DONOR_UP View Gene Set 2.471e-08 532 4.411e-07 134 Genes diffierentially expressed in kidney biopsies from patients with well functioning kidneys more than 1-year post transplant compared to the biopsies from normal living kidney donors. www.broad.mit.e...
Broad LINDGREN_BLADDER_CANCER_CLUSTER_1_DN View Gene Set 3.513e-08 368 6.224e-07 135 Genes whose expression profile is specific to Custer I of urothelial cell carcinoma (UCC) tumors. www.broad.mit.e...
Broad KUMAMOTO_RESPONSE_TO_NUTLIN_3A_DN View Gene Set 4.671e-08 10 8.156e-07 136 Genes down-regulated in response to nutlin-3a [PubChem=216345] an inhibitor of MDM2 [Gene ID=4193] in skin fibroblast cultures after knockdown of TP53 [Gene ID=7157] by RNAi. www.broad.mit.e...
Broad PYEON_CANCER_HEAD_AND_NECK_VS_CERVICAL_UP View Gene Set 4.641e-08 175 8.156e-07 136 Up-regulated genes in head and neck cancer compared to cervical carcinoma samples. www.broad.mit.e...
Broad KIM_WT1_TARGETS_12HR_DN View Gene Set 5.048e-08 200 8.749e-07 138 Genes down-regulated in UB27 cells (osteosarcoma) at 12 hr after inducing the expression of a mutated form of WT1 [Gene ID=7490]. www.broad.mit.e...
Broad LEE_LIVER_CANCER_SURVIVAL_DN View Gene Set 5.547e-08 123 9.545e-07 139 Genes highly expressed in hepatocellular carcinoma with poor survival. www.broad.mit.e...
Broad SCHLOSSER_MYC_TARGETS_AND_SERUM_RESPONSE_UP View Gene Set 6.77e-08 45 1.157e-06 140 Cluster 5: genes up-regulated in B493-6 cells (B lymphocytes) by MYC [Gene ID=4609] alone or in combination with serum but not by serum alone. www.broad.mit.e...
Broad GOLDRATH_HOMEOSTATIC_PROLIFERATION View Gene Set 1.207e-07 154 2.047e-06 141 Up-regulated in CD8+ [Gene ID=925] T lymphocytes undergoing homeostatic proliferation (HP) versus the naive cells; these genes are not up-regulated versus effector or memory cell population. www.broad.mit.e...
Broad YAO_TEMPORAL_RESPONSE_TO_PROGESTERONE_CLUSTER_10 View Gene Set 1.395e-07 63 2.349e-06 142 Genes co-regulated in uterus during a time course response to progesterone [PubChem=5994]: SOM cluster 11. www.broad.mit.e...
Broad YAO_TEMPORAL_RESPONSE_TO_PROGESTERONE_CLUSTER_17 View Gene Set 1.622e-07 165 2.713e-06 143 Genes co-regulated in uterus during a time course response to progesterone [PubChem=5994]: SOM cluster 17. www.broad.mit.e...
Broad YAO_TEMPORAL_RESPONSE_TO_PROGESTERONE_CLUSTER_13 View Gene Set 3.06e-07 158 5.083e-06 144 Genes co-regulated in uterus during a time course response to progesterone [PubChem=5994]: SOM cluster 13. www.broad.mit.e...
Broad MONTERO_THYROID_CANCER_POOR_SURVIVAL_UP View Gene Set 3.216e-07 10 5.305e-06 145 Up-regulated genes predicting poor survival of patients with thyroid carcinoma. www.broad.mit.e...
Broad WILCOX_PRESPONSE_TO_ROGESTERONE_UP View Gene Set 3.42e-07 143 5.603e-06 146 Genes up-regulated in primary cultures of ovarian surface epithlium cells exposed to progesterone [PubChem=5994] for 5 days. www.broad.mit.e...
Broad GOLDRATH_ANTIGEN_RESPONSE View Gene Set 3.693e-07 315 5.979e-06 147 Genes up-regulated at the peak of an antigen response of naive CD8+ [Gene ID=925 926] T-cells. www.broad.mit.e...
Broad RAMASWAMY_METASTASIS_UP View Gene Set 3.699e-07 63 5.979e-06 147 Up-regulated genes in metastatic vs primary solid tumors. www.broad.mit.e...
Broad HAMAI_APOPTOSIS_VIA_TRAIL_UP View Gene Set 4.213e-07 328 6.763e-06 149 Genes up-regulated in T1 cells (primary melanoma sensitive to TRAIL [Gene ID=8743]) compared to G1 cells (metastatic melanoma resistant to TRAIL). www.broad.mit.e...
Broad SENGUPTA_NASOPHARYNGEAL_CARCINOMA_UP View Gene Set 4.663e-07 269 7.436e-06 150 Genes up-regulated in nsopharyngeal carcinoma relative to the normal tissue. www.broad.mit.e...
Broad NAKAYAMA_SOFT_TISSUE_TUMORS_PCA2_UP View Gene Set 5.277e-07 87 8.36e-06 151 Top 100 probe sets contrubuting to the positive side of the 2nd principal component; associated with adipocytic differentiation. www.broad.mit.e...
Broad SHEPARD_CRUSH_AND_BURN_MUTANT_DN View Gene Set 5.635e-07 147 8.868e-06 152 Human orthologs of genes down-regulated in the crb ('crash and burn') zebrafish mutant that represents a loss-of-function mutation in BMYB [Gene ID=4605]. www.broad.mit.e...
Broad FINETTI_BREAST_CANCER_KINOME_RED View Gene Set 5.985e-07 15 9.296e-06 153 Genes in the red cluster of protein kinases distinguishing between luminal A and basal breast cancer subtypes. www.broad.mit.e...
Broad FINETTI_BREAST_CANCER_BASAL_VS_LUMINAL View Gene Set 5.985e-07 15 9.296e-06 153 Protein kinases distinguishing between basal and luminal A subtypes of breast cancer. www.broad.mit.e...
Broad PENG_RAPAMYCIN_RESPONSE_DN View Gene Set 6.23e-07 69 9.614e-06 155 Genes down-regulated in BJUB cells (B-lymphoma) in response to rapamycin [PubChem=6610346] treatment. www.broad.mit.e...
Broad BOYAULT_LIVER_CANCER_SUBCLASS_G123_UP View Gene Set 6.614e-07 44 1.008e-05 156 Up-regulated genes in hepatocellular carcinoma (HCC) subclass G123 defined by unsupervised clustering. www.broad.mit.e...
Broad WU_APOPTOSIS_BY_CDKN1A_VIA_TP53 View Gene Set 6.575e-07 36 1.008e-05 156 Genes downstream of both CDKN1A and TP53 [Gene ID=1026 7157] in 2774qw1 cells (ovarian cancer). www.broad.mit.e...
Broad GRADE_COLON_AND_RECTAL_CANCER_UP View Gene Set 7.768e-07 213 1.176e-05 158 Up-regulated genes in both rectal and colon carcinoma compared to normal mucosa samples. www.broad.mit.e...
Broad NAKAMURA_CANCER_MICROENVIRONMENT_DN View Gene Set 9.075e-07 45 1.365e-05 159 Genes down-regulated in pancreatic cancer cells grown in orthotopic xenograft tumors compared to those grown in vitro. www.broad.mit.e...
Broad GRADE_COLON_CANCER_UP View Gene Set 9.633e-07 711 1.44e-05 160 Up-regulated genes in colon carcinoma tumors compared to the matched normal mucosa samples. www.broad.mit.e...
Broad WANG_LMO4_TARGETS_DN View Gene Set 1.122e-06 327 1.667e-05 161 Genes down-regulated in MCF7 cells (breast cancer) engineered to conditionally express LMO4 [Gene ID=8543] by a Tet Off system. www.broad.mit.e...
Broad ZHANG_RESPONSE_TO_CANTHARIDIN_DN View Gene Set 1.146e-06 60 1.692e-05 162 Genes down-regulated in HL-60 cells (promyeloid leukemia) by cantharidin [PubChem=6708701]. www.broad.mit.e...
Broad OSMAN_BLADDER_CANCER_UP View Gene Set 1.22e-06 387 1.79e-05 163 Genes up-regulated in blood samples from bladder cancer patients. www.broad.mit.e...
Broad PENG_LEUCINE_DEPRIVATION_DN View Gene Set 1.606e-06 50 2.343e-05 164 Genes down-regulated in BJAB cells (B-lymphoma) after leucine [PubChem=857] deprivation. www.broad.mit.e...
Broad ELVIDGE_HYPOXIA_BY_DMOG_DN View Gene Set 1.847e-06 56 2.678e-05 165 Genes down-regulated in MCF7 cells (breast cancer) treated with hypoxia mimetic DMOG [PubChem=3080614]. www.broad.mit.e...
Broad WANG_LMO4_TARGETS_UP View Gene Set 1.991e-06 341 2.869e-05 166 Genes up-regulated in MCF7 cells (breast cancer) engineered to conditionally express LMO4 [Gene ID=8543] by a Tet Off system. www.broad.mit.e...
Broad DAZARD_RESPONSE_TO_UV_NHEK_DN View Gene Set 2.351e-06 256 3.367e-05 167 Genes down-regulated in NHEK cells (normal keratinocytes) by UV-B irradiation. www.broad.mit.e...
Broad SCIBETTA_KDM5B_TARGETS_DN View Gene Set 2.941e-06 76 4.187e-05 168 Genes down-regulated in HB2 cells (mammary epithelium) upon expression of KDM5B [Gene ID=10765] off an adenoviral vector. www.broad.mit.e...
Broad IVANOVA_HEMATOPOIESIS_EARLY_PROGENITOR View Gene Set 3.767e-06 100 5.331e-05 169 Genes in the expression cluster 'Early Progenitors Shared': up-regulated in hematopoietic progenitors from adult bone marrow and from fetal liver. www.broad.mit.e...
Broad RICKMAN_TUMOR_DIFFERENTIATED_MODERATELY_VS_POORLY_UP View Gene Set 3.836e-06 36 5.366e-05 170 Up-regulated genes that vary between HNSCC (head and neck squamous cell carcinoma) groups formed on the basis of their level of pathological differentiation: moderately vs poorly differentiated tumors. www.broad.mit.e...
Broad RICKMAN_TUMOR_DIFFERENTIATED_MODERATELY_VS_POORLY_DN View Gene Set 3.836e-06 36 5.366e-05 170 Down-regulated genes that vary between HNSCC (head and neck squamous cell carcinoma) groups formed on the basis of their level of pathological differentiation: moderately vs poorly differentiated tumors. www.broad.mit.e...
Broad DACOSTA_UV_RESPONSE_VIA_ERCC3_COMMON_DN View Gene Set 5.006e-06 418 6.962e-05 172 Common down-regulated transcripts in fibroblasts expressing either XP/CS or TDD mutant forms of ERCC3 [Gene ID=2071] after UVC irradiation. www.broad.mit.e...
Broad FOURNIER_ACINAR_DEVELOPMENT_LATE_DN View Gene Set 5.234e-06 21 7.236e-05 173 Genes down-regulated late in HMEC cells (mammary epithelium) during acinar development in vitro. www.broad.mit.e...
Broad FLECHNER_PBL_KIDNEY_TRANSPLANT_OK_VS_DONOR_UP View Gene Set 5.602e-06 147 7.701e-05 174 Genes upreglated in peripheral blood lymphocytes (PBL) from patients with well functioning kidneys more than 1-year post transplant compared to those from normal living kidney donors. www.broad.mit.e...
Broad WANG_RESPONSE_TO_FORSKOLIN_UP View Gene Set 5.663e-06 22 7.741e-05 175 Genes up-regulated in LNCaP cells (prostate cancer) treated with forskolin [PubChem=47936] an activator of PKA pathway. www.broad.mit.e...
Broad CHANG_CORE_SERUM_RESPONSE_UP View Gene Set 7.362e-06 66 0.0001001 176 Up-regulated genes in the canonical gene expression signature of the fibroblast core serum response (CSR) defined by the Stanford group. www.broad.mit.e...
Broad SHEPARD_BMYB_TARGETS View Gene Set 8.333e-06 60 0.0001126 177 Human orthologs of BMYB [Gene ID=4605] target genes in zebra fish identified as commonly changed in the BMYB loss of function mutant crb ('crush and burn') and after knockdown of BMYB by morpholino. www.broad.mit.e...
Broad BHATTACHARYA_EMBRYONIC_STEM_CELL View Gene Set 8.707e-06 76 0.000117 178 The 'stemnes' signature: genes up-regulated and common to 6 human embryonic stem cell lines tested. www.broad.mit.e...
Broad BILD_E2F3_ONCOGENIC_SIGNATURE View Gene Set 8.934e-06 222 0.0001194 179 Genes selected in supervised analyses to discriminate cells expressing E2F3 [Gene ID=1871] from control cells expressing GFP. www.broad.mit.e...
Broad RIZ_ERYTHROID_DIFFERENTIATION View Gene Set 9.624e-06 71 0.0001279 180 Selected gradually up-regulated genes in the TLX1 [Gene ID=3195] Tet On iEBHX15-4 cells (pro-erythroblasts). www.broad.mit.e...
Broad MOREAUX_B_LYMPHOCYTE_MATURATION_BY_TACI_DN View Gene Set 1.013e-05 42 0.0001338 181 Genes down-regulated in normal bone marrow plasma cells (BMPC) compared to polyclonal plasmablasts (PPC) that also distinguished multiple myeloma (MM) samples by expression of levels of TACI [Gene ID=23495]. www.broad.mit.e...
Broad CAFFAREL_RESPONSE_TO_THC_DN View Gene Set 1.119e-05 25 0.0001471 182 Genes down-regulated in EVSA-T cells (breast cancer) treated THC (delta-9-tetrahydrocannabinol) [PubChem=6610319]. www.broad.mit.e...
Broad YAO_TEMPORAL_RESPONSE_TO_PROGESTERONE_CLUSTER_14 View Gene Set 1.182e-05 131 0.0001545 183 Genes co-regulated in uterus during a time course response to progesterone [PubChem=5994]: SOM cluster 14. www.broad.mit.e...
Broad LY_AGING_PREMATURE_DN View Gene Set 1.321e-05 24 0.0001718 184 Genes down-regulated in fibroblasts from patients with Hutchinson-Gilford progeria (premature aging) compared to those from normal young individuals. www.broad.mit.e...
Broad WANG_CLIM2_TARGETS_DN View Gene Set 1.4e-05 166 0.000181 185 Genes down-regulated in MCF7 cells (breast cancer) engineered to conditionally express a dominant negative form of CLIM2 [Gene ID=8861] by a Tet Off system. www.broad.mit.e...
Broad MORI_EMU_MYC_LYMPHOMA_BY_ONSET_TIME_UP View Gene Set 1.437e-05 92 0.0001848 186 Genes correlated with the early tumor onset in the Emu-myc transgenic mouse lymphoma model. www.broad.mit.e...
Broad WANG_RESPONSE_TO_ANDROGEN_UP View Gene Set 1.472e-05 28 0.0001882 187 Genes up-regulated in LNCaP cells (prostate cancer) treated with synthetic androgen R1881 [PubChem=13766]. www.broad.mit.e...
Broad VERNELL_RETINOBLASTOMA_PATHWAY_UP View Gene Set 1.77e-05 39 0.0002253 188 Cluster 1: genes up-regulated by RB1 [Gene ID=5925] CDNK2A [Gene ID=1029] and one of the E2Fs (E2F1 E2F2 or E2F3 [Gene ID=1869 1870 1871]). www.broad.mit.e...
Broad STEIN_ESR1_TARGETS View Gene Set 1.895e-05 84 0.0002398 189 Genes regulated by ESR1 [Gene ID=2099] in MCF-7 cells (breast cancer). www.broad.mit.e...
Broad STEIN_ESRRA_TARGETS View Gene Set 2.075e-05 508 0.0002612 190 Genes regulated by ESRRA [Gene ID=2101] in MCF-7 cells (breast cancer). www.broad.mit.e...
Broad TIEN_INTESTINE_PROBIOTICS_6HR_DN View Gene Set 2.112e-05 160 0.0002645 191 Genes down-regulated in Caco-2 cells (intestinal epithelium) after coculture with the probiotic bacteria L. casei for 6h. www.broad.mit.e...
Broad ELVIDGE_HIF1A_AND_HIF2A_TARGETS_UP View Gene Set 2.124e-05 38 0.0002646 192 Genes up-regulated in MCF7 cells (breast cancer) after knockdown of both HIF1A and HIF2A [Gene ID=3091 2034] by RNAi. www.broad.mit.e...
Broad LOPEZ_MESOTELIOMA_SURVIVAL_TIME_UP View Gene Set 2.31e-05 13 0.0002862 193 Top genes higher expressed in short term mesothelioma survivors. www.broad.mit.e...
Broad ALCALAY_AML_BY_NPM1_LOCALIZATION_DN View Gene Set 2.703e-05 179 0.0003333 194 Genes changed in acute myeloid leukemia (AML) with respect to cellular localization of NPM1 [Gene ID=4869]: cytoplasmic vs. nucleolar. www.broad.mit.e...
Broad FLECHNER_BIOPSY_KIDNEY_TRANSPLANT_REJECTED_VS_OK_DN View Gene Set 3.028e-05 532 0.0003714 195 Genes differentially expressed in kidney biopsies from patients with acute transplant rejection compared to the biopsies from patients with well functioning kidneys more than 1-year post transplant. www.broad.mit.e...
Broad DING_LUNG_CANCER_EXPRESSION_BY_COPY_NUMBER View Gene Set 3.457e-05 91 0.0004219 196 The lung adenocarcinoma TSP (tumor sequencing project) genes showing strong correlation between DNA copy number variation and gene expression. www.broad.mit.e...
Broad RHODES_CANCER_META_SIGNATURE View Gene Set 4.148e-05 54 0.0005037 197 Genes commonly up-regulated in cancer relative to normal tissue according to the meta-analysis of the OncoMine gene expression database. www.broad.mit.e...
Broad KAUFFMANN_DNA_REPAIR_GENES View Gene Set 4.289e-05 205 0.0005181 198 Genes involved in DNA repair compiled manually by the authors. www.broad.mit.e...
Broad DAIRKEE_CANCER_PRONE_RESPONSE_BPA View Gene Set 4.441e-05 46 0.0005338 199 'Cancer prone response profile' (CPRP): genes changed in response to bisphenol A [PubChem=6623] in epithelial cell cultures from patients at high risk of breast cancer. www.broad.mit.e...
Broad TANG_SENESCENCE_TP53_TARGETS_DN View Gene Set 4.581e-05 40 0.0005476 200 Genes down-regulated in WI-38 cells (senescent primary fibroblasts) after inactivation of TP53 [Gene ID=7157] by GSE56 polypeptide. www.broad.mit.e...

Gene Set Collection: Broad.c2.CP

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad SA_REG_CASCADE_OF_CYCLIN_EXPR View Gene Set 0.0007189 13 0.03379 1 Expression of cyclins regulates progression through the cell cycle by activating cyclin-dependent kinases. www.broad.mit.e...

Gene Set Collection: Broad.c2.CP.BIOCARTA

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad BIOCARTA_RANMS_PATHWAY View Gene Set 1.142e-05 10 0.002477 1 Role of Ran in mitotic spindle regulation www.broad.mit.e...
Broad BIOCARTA_CELLCYCLE_PATHWAY View Gene Set 6.762e-05 23 0.007336 2 Cyclins and Cell Cycle Regulation www.broad.mit.e...

Gene Set Collection: Broad.c2.CP.KEGG

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad KEGG_CELL_CYCLE View Gene Set 6.599e-12 128 1.227e-09 1 Cell cycle www.broad.mit.e...
Broad KEGG_SPLICEOSOME View Gene Set 3.863e-08 118 3.592e-06 2 Spliceosome www.broad.mit.e...
Broad KEGG_PROGESTERONE_MEDIATED_OOCYTE_MATURATION View Gene Set 2.414e-06 86 0.0001497 3 Progesterone-mediated oocyte maturation www.broad.mit.e...
Broad KEGG_OOCYTE_MEIOSIS View Gene Set 2.272e-05 114 0.001057 4 Oocyte meiosis www.broad.mit.e...
Broad KEGG_RNA_DEGRADATION View Gene Set 3.961e-05 59 0.001473 5 RNA degradation www.broad.mit.e...
Broad KEGG_PYRIMIDINE_METABOLISM View Gene Set 0.0001014 98 0.003144 6 Pyrimidine metabolism www.broad.mit.e...
Broad KEGG_UBIQUITIN_MEDIATED_PROTEOLYSIS View Gene Set 0.0001326 138 0.003524 7 Ubiquitin mediated proteolysis www.broad.mit.e...
Broad KEGG_PARKINSONS_DISEASE View Gene Set 0.0002247 133 0.005223 8 Parkinson's disease www.broad.mit.e...
Broad KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_BIOSYNTHESIS View Gene Set 0.0004396 11 0.008177 9 Valine leucine and isoleucine biosynthesis www.broad.mit.e...
Broad KEGG_AMINOACYL_TRNA_BIOSYNTHESIS View Gene Set 0.0004021 41 0.008177 9 Aminoacyl-tRNA biosynthesis www.broad.mit.e...
Broad KEGG_STEROID_BIOSYNTHESIS View Gene Set 0.0008991 17 0.0152 11 Steroid biosynthesis www.broad.mit.e...
Broad KEGG_DNA_REPLICATION View Gene Set 0.001122 36 0.01738 12 DNA replication www.broad.mit.e...
Broad KEGG_HUNTINGTONS_DISEASE View Gene Set 0.001313 185 0.01879 13 Huntington's disease www.broad.mit.e...
Broad KEGG_RIBOSOME View Gene Set 0.002552 88 0.03391 14 Ribosome www.broad.mit.e...
Broad KEGG_CITRATE_CYCLE_TCA_CYCLE View Gene Set 0.003558 32 0.04136 15 Citrate cycle (TCA cycle) www.broad.mit.e...
Broad KEGG_PROTEIN_EXPORT View Gene Set 0.003533 24 0.04136 15 Protein export www.broad.mit.e...
Broad KEGG_PURINE_METABOLISM View Gene Set 0.003794 157 0.04151 17 Purine metabolism www.broad.mit.e...
Broad KEGG_OXIDATIVE_PHOSPHORYLATION View Gene Set 0.004789 135 0.04949 18 Oxidative phosphorylation www.broad.mit.e...
Broad KEGG_PANTOTHENATE_AND_COA_BIOSYNTHESIS View Gene Set 0.005316 16 0.04988 19 Pantothenate and CoA biosynthesis www.broad.mit.e...
Broad KEGG_BASE_EXCISION_REPAIR View Gene Set 0.005363 35 0.04988 19 Base excision repair www.broad.mit.e...

Gene Set Collection: Broad.c2.CP.REACTOME

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad REACTOME_CELL_CYCLE_MITOTIC View Gene Set 8.864e-21 306 3.812e-18 1 Genes involved in Cell Cycle Mitotic www.broad.mit.e...
Broad REACTOME_GENE_EXPRESSION View Gene Set 5.206e-17 415 1.119e-14 2 Genes involved in Gene Expression www.broad.mit.e...
Broad REACTOME_MITOTIC_PROMETAPHASE View Gene Set 1.171e-16 92 1.259e-14 3 Genes involved in Mitotic Prometaphase www.broad.mit.e...
Broad REACTOME_MITOTIC_M_M_G1_PHASES View Gene Set 8.98e-17 157 1.259e-14 3 Genes involved in Mitotic M-M/G1 phases www.broad.mit.e...
Broad REACTOME_METABOLISM_OF_RNA View Gene Set 3.684e-11 95 3.168e-09 5 Genes involved in Metabolism of RNA www.broad.mit.e...
Broad REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA View Gene Set 7.151e-11 128 5.125e-09 6 Genes involved in Processing of Capped Intron-Containing Pre-mRNA www.broad.mit.e...
Broad REACTOME_G2_M_CHECKPOINTS View Gene Set 6.915e-08 43 4.248e-06 7 Genes involved in G2/M Checkpoints www.broad.mit.e...
Broad REACTOME_SNRNP_ASSEMBLY View Gene Set 9.73e-08 50 5.23e-06 8 Genes involved in snRNP Assembly www.broad.mit.e...
Broad REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS View Gene Set 2.321e-07 37 9.981e-06 9 Genes involved in Activation of ATR in response to replication stress www.broad.mit.e...
Broad REACTOME_CELL_CYCLE_CHECKPOINTS View Gene Set 2.171e-07 110 9.981e-06 9 Genes involved in Cell Cycle Checkpoints www.broad.mit.e...
Broad REACTOME_INFLUENZA_LIFE_CYCLE View Gene Set 2.954e-07 137 1.058e-05 11 Genes involved in Influenza Life Cycle www.broad.mit.e...
Broad REACTOME_TRANSCRIPTION View Gene Set 2.886e-07 188 1.058e-05 11 Genes involved in Transcription www.broad.mit.e...
Broad REACTOME_FORMATION_AND_MATURATION_OF_MRNA_TRANSCRIPT View Gene Set 4.184e-07 142 1.384e-05 13 Genes involved in Formation and Maturation of mRNA Transcript www.broad.mit.e...
Broad REACTOME_ELONGATION_AND_PROCESSING_OF_CAPPED_TRANSCRIPTS View Gene Set 4.944e-07 124 1.518e-05 14 Genes involved in Elongation and Processing of Capped Transcripts www.broad.mit.e...
Broad REACTOME_MRNA_SPLICING View Gene Set 6.361e-07 97 1.824e-05 15 Genes involved in mRNA Splicing www.broad.mit.e...
Broad REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRON_CONTAINING_TRANSCRIPT View Gene Set 1.751e-06 42 4.705e-05 16 Genes involved in Transport of Mature mRNA derived from an Intron-Containing Transcript www.broad.mit.e...
Broad REACTOME_REV_MEDIATED_NUCLEAR_EXPORT_OF_HIV1_RNA View Gene Set 2.542e-06 31 6.431e-05 17 Genes involved in Rev-mediated nuclear export of HIV-1 RNA www.broad.mit.e...
Broad REACTOME_TRANSPORT_OF_THE_SLBP_INDEPENDENT_MATURE_MRNA View Gene Set 2.944e-06 32 7.034e-05 18 Genes involved in Transport of the SLBP independent Mature mRNA www.broad.mit.e...
Broad REACTOME_METABOLISM_OF_PROTEINS View Gene Set 4.202e-06 215 9.51e-05 19 Genes involved in Metabolism of proteins www.broad.mit.e...
Broad REACTOME_HIV_LIFE_CYCLE View Gene Set 9.653e-06 103 0.0001996 20 Genes involved in HIV Life Cycle www.broad.mit.e...
Broad REACTOME_NUCLEAR_IMPORT_OF_REV_PROTEIN View Gene Set 9.747e-06 30 0.0001996 20 Genes involved in Nuclear import of Rev protein www.broad.mit.e...
Broad REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY View Gene Set 1.028e-05 29 0.000201 22 Genes involved in NEP/NS2 Interacts with the Cellular Export Machinery www.broad.mit.e...
Broad REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE View Gene Set 1.13e-05 90 0.0002112 23 Genes involved in Late Phase of HIV Life Cycle www.broad.mit.e...
Broad REACTOME_TRANSLATION View Gene Set 1.198e-05 120 0.0002146 24 Genes involved in Translation www.broad.mit.e...
Broad REACTOME_VPR_MEDIATED_NUCLEAR_IMPORT_OF_PICS View Gene Set 1.665e-05 31 0.0002864 25 Genes involved in Vpr-mediated nuclear import of PICs www.broad.mit.e...
Broad REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION View Gene Set 1.772e-05 33 0.000293 26 Genes involved in E2F mediated regulation of DNA replication www.broad.mit.e...
Broad REACTOME_RNA_POLYMERASE_I_III_AND_MITOCHONDRIAL_TRANSCRIPTION View Gene Set 2.31e-05 120 0.0003678 27 Genes involved in RNA Polymerase I RNA Polymerase III and Mitochondrial Transcription www.broad.mit.e...
Broad REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS View Gene Set 2.612e-05 29 0.0004011 28 Genes involved in Transport of Ribonucleoproteins into the Host Nucleus www.broad.mit.e...
Broad REACTOME_G1_S_TRANSITION View Gene Set 3.271e-05 102 0.0004851 29 Genes involved in G1/S Transition www.broad.mit.e...
Broad REACTOME_METABOLISM_OF_MRNA View Gene Set 3.663e-05 45 0.000525 30 Genes involved in Metabolism of mRNA www.broad.mit.e...
Broad REACTOME_HIV_INFECTION View Gene Set 4.25e-05 183 0.0005895 31 Genes involved in HIV Infection www.broad.mit.e...
Broad REACTOME_CYCLIN_A1_ASSOCIATED_EVENTS_DURING_G2_M_TRANSITION View Gene Set 5.637e-05 15 0.0007575 32 Genes involved in Cyclin A1 associated events during G2/M transition www.broad.mit.e...
Broad REACTOME_GTP_HYDROLYSIS_AND_JOINING_OF_THE_60S_RIBOSOMAL_SUBUNIT View Gene Set 0.0001052 106 0.001371 33 Genes involved in GTP hydrolysis and joining of the 60S ribosomal subunit www.broad.mit.e...
Broad REACTOME_E2F_TRANSCRIPTIONAL_TARGETS_AT_G1_S View Gene Set 0.0001161 22 0.001468 34 Genes involved in E2F transcriptional targets at G1/S www.broad.mit.e...
Broad REACTOME_MITOCHONDRIAL_TRNA_AMINOACYLATION View Gene Set 0.000138 20 0.001696 35 Genes involved in Mitochondrial tRNA aminoacylation www.broad.mit.e...
Broad REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS View Gene Set 0.0001819 120 0.002114 36 Genes involved in Host Interactions of HIV factors www.broad.mit.e...
Broad REACTOME_S_PHASE View Gene Set 0.0001778 103 0.002114 36 Genes involved in S Phase www.broad.mit.e...
Broad REACTOME_TRNA_AMINOACYLATION View Gene Set 0.0002017 40 0.002282 38 Genes involved in tRNA Aminoacylation www.broad.mit.e...
Broad REACTOME_ACTIVATION_OF_THE_PRE_REPLICATIVE_COMPLEX View Gene Set 0.0002349 30 0.00259 39 Genes involved in Activation of the pre-replicative complex www.broad.mit.e...
Broad REACTOME_INSULIN_SYNTHESIS_AND_SECRETION View Gene Set 0.0002615 129 0.002743 40 Genes involved in Insulin Synthesis and Secretion www.broad.mit.e...
Broad REACTOME_PHOSPHORYLATION_OF_THE_APC View Gene Set 0.0002598 17 0.002743 40 Genes involved in Phosphorylation of the APC/C www.broad.mit.e...
Broad REACTOME_INACTIVATION_OF_APC_VIA_DIRECT_INHIBITION_OF_THE_APCOMPLEX View Gene Set 0.0002693 18 0.002757 42 Genes involved in Inactivation of APC/C via direct inhibition of the APC/C complex www.broad.mit.e...
Broad REACTOME_UNWINDING_OF_DNA View Gene Set 0.0002805 11 0.002805 43 Genes involved in Unwinding of DNA www.broad.mit.e...
Broad REACTOME_APCDC20_MEDIATED_DEGRADATION_OF_CYCLIN_B View Gene Set 0.0002898 18 0.002833 44 Genes involved in APC/C:Cdc20 mediated degradation of Cyclin B www.broad.mit.e...
Broad REACTOME_REGULATION_OF_GLUCOKINASE_BY_GLUCOKINASE_REGULATORY_PROTEIN View Gene Set 0.000297 29 0.002838 45 Genes involved in Regulation of Glucokinase by Glucokinase Regulatory Protein www.broad.mit.e...
Broad REACTOME_TELOMERE_MAINTENANCE View Gene Set 0.0003953 77 0.003695 46 Genes involved in Telomere Maintenance www.broad.mit.e...
Broad REACTOME_CHOLESTEROL_BIOSYNTHESIS View Gene Set 0.0004539 21 0.004153 47 Genes involved in Cholesterol biosynthesis www.broad.mit.e...
Broad REACTOME_REGULATION_OF_APC_ACTIVATORS_BETWEEN_G1_S_AND_EARLY_ANAPHASE View Gene Set 0.0004807 71 0.004306 48 Genes involved in Regulation of APC/C activators between G1/S and early anaphase www.broad.mit.e...
Broad REACTOME_ELECTRON_TRANSPORT_CHAIN View Gene Set 0.0005422 75 0.004754 49 Genes involved in Electron Transport Chain www.broad.mit.e...
Broad REACTOME_RNA_POLYMERASE_I_PROMOTER_CLEARANCE View Gene Set 0.0005528 82 0.004754 49 Genes involved in RNA PolymerasePromoter Clearance www.broad.mit.e...
Broad REACTOME_FORMATION_OF_A_POOL_OF_FREE_40S_SUBUNITS View Gene Set 0.0005787 95 0.004879 51 Genes involved in Formation of a pool of free 40S subunits www.broad.mit.e...
Broad REACTOME_G2_M_TRANSITION View Gene Set 0.0006277 84 0.005191 52 Genes involved in G2/M Transition www.broad.mit.e...
Broad REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION View Gene Set 0.0007677 100 0.006228 53 Genes involved in Influenza Viral RNA Transcription and Replication www.broad.mit.e...
Broad REACTOME_METABLISM_OF_NUCLEOTIDES View Gene Set 0.0008033 71 0.006397 54 Genes involved in Metablism of nucleotides www.broad.mit.e...
Broad REACTOME_RNA_POLYMERASE_II_TRANSCRIPTION View Gene Set 0.0008367 83 0.006542 55 Genes involved in RNA Polymerase II Transcription www.broad.mit.e...
Broad REACTOME_DNA_REPAIR View Gene Set 0.0008533 102 0.006552 56 Genes involved in DNA Repair www.broad.mit.e...
Broad REACTOME_DNA_STRAND_ELONGATION View Gene Set 0.0009387 31 0.007082 57 Genes involved in DNA strand elongation www.broad.mit.e...
Broad REACTOME_VITAMIN_B5_(PANTOTHENATE)_METABOLISM View Gene Set 0.0009909 11 0.007346 58 Genes involved in Vitamin B5 (pantothenate) metabolism www.broad.mit.e...
Broad REACTOME_TRANSFORMATION_OF_LANOSTEROL_TO_CHOLESTEROL View Gene Set 0.001087 10 0.00792 59 Genes involved in Transformation of lanosterol to cholesterol www.broad.mit.e...
Broad REACTOME_DNA_REPLICATION_PRE_INITIATION View Gene Set 0.001126 76 0.008039 60 Genes involved in DNA Replication Pre-Initiation www.broad.mit.e...
Broad REACTOME_E2F_ENABLED_INHIBITION_OF_PRE_REPLICATION_COMPLEX_FORMATION View Gene Set 0.00114 10 0.008039 60 Genes involved in E2F-enabled inhibition of pre-replication complex formation www.broad.mit.e...
Broad REACTOME_VIRAL_MRNA_TRANSLATION View Gene Set 0.001247 84 0.008511 62 Genes involved in Viral mRNA Translation www.broad.mit.e...
Broad REACTOME_GLUCOSE_TRANSPORT View Gene Set 0.001234 38 0.008511 62 Genes involved in Glucose transport www.broad.mit.e...
Broad REACTOME_PEPTIDE_CHAIN_ELONGATION View Gene Set 0.001302 84 0.008745 64 Genes involved in Peptide chain elongation www.broad.mit.e...
Broad REACTOME_SYNTHESIS_OF_DNA View Gene Set 0.001372 89 0.008937 65 Genes involved in Synthesis of DNA www.broad.mit.e...
Broad REACTOME_TRANSLATION_INITIATION_COMPLEX_FORMATION View Gene Set 0.00137 56 0.008937 65 Genes involved in Translation initiation complex formation www.broad.mit.e...
Broad REACTOME_RECRUITMENT_OF_NUMA_TO_MITOTIC_CENTROSOMES View Gene Set 0.001515 11 0.009721 67 Genes involved in Recruitment of NuMA to mitotic centrosomes www.broad.mit.e...
Broad REACTOME_DIABETES_PATHWAYS View Gene Set 0.00168 383 0.01062 68 Genes involved in Diabetes pathways www.broad.mit.e...
Broad REACTOME_CDC6_ASSOCIATION_WITH_THE_ORC:ORIGIN_COMPLEX View Gene Set 0.001995 11 0.01243 69 Genes involved in CDC6 association with the ORC:origin complex www.broad.mit.e...
Broad REACTOME_CDC20_PHOSPHO_APC_MEDIATED_DEGRADATION_OF_CYCLIN_A View Gene Set 0.002317 63 0.01403 70 Genes involved in Cdc20:Phospho-APC/C mediated degradation of Cyclin A www.broad.mit.e...
Broad REACTOME_MRNA_3_END_PROCESSING View Gene Set 0.002287 25 0.01403 70 Genes involved in mRNA 3-end processing www.broad.mit.e...
Broad REACTOME_ASSOCIATION_OF_LICENSING_FACTORS_WITH_THE_PREREPLICATIVE_COMPLEX View Gene Set 0.002891 12 0.01727 72 Genes involved in Association of licensing factors with the pre-replicative complex www.broad.mit.e...
Broad REACTOME_RNA_POLYMERASE_I_PROMOTER_ESCAPE View Gene Set 0.002973 20 0.01751 73 Genes involved in RNA Polymerase I Promoter Escape www.broad.mit.e...
Broad REACTOME_MEMBRANE_TRAFFICKING View Gene Set 0.003095 78 0.01774 74 Genes involved in Membrane Trafficking www.broad.mit.e...
Broad REACTOME_RNA_POLYMERASE_I_CHAIN_ELONGATION View Gene Set 0.003054 34 0.01774 74 Genes involved in RNA PolymeraseChain Elongation www.broad.mit.e...
Broad REACTOME_PURINE_METABOLISM View Gene Set 0.003245 30 0.01836 76 Genes involved in Purine metabolism www.broad.mit.e...
Broad REACTOME_RNA_POLYMERASE_III_TRANSCRIPTION_INITIATION_FROM_TYPE_2_PROMOTER View Gene Set 0.004237 20 0.02366 77 Genes involved in RNA Polymerase III Transcription Initiation From Type 2 Promoter www.broad.mit.e...
Broad REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX View Gene Set 0.004863 49 0.02647 78 Genes involved in Formation of the ternary complex and subsequently the 43S complex www.broad.mit.e...
Broad REACTOME_PURINE_RIBONUCLEOSIDE_MONOPHOSPHATE_BIOSYNTHESIS View Gene Set 0.004843 11 0.02647 78 Genes involved in Purine ribonucleoside monophosphate biosynthesis www.broad.mit.e...
Broad REACTOME_RNA_POLYMERASE_I_TRANSCRIPTION_INITIATION View Gene Set 0.00495 24 0.0266 80 Genes involved in RNA PolymeraseTranscription Initiation www.broad.mit.e...
Broad REACTOME_DEADENYLATION_OF_MRNA View Gene Set 0.00542 21 0.02877 81 Genes involved in Deadenylation of mRNA www.broad.mit.e...
Broad REACTOME_M_G1_TRANSITION View Gene Set 0.005895 61 0.03091 82 Genes involved in M/G1 Transition www.broad.mit.e...
Broad REACTOME_EXTENSION_OF_TELOMERES View Gene Set 0.006722 28 0.03482 83 Genes involved in Extension of Telomeres www.broad.mit.e...
Broad REACTOME_RNA_POLYMERASE_I_TRANSCRIPTION_TERMINATION View Gene Set 0.00904 21 0.04628 84 Genes involved in RNA PolymeraseTranscription Termination www.broad.mit.e...
Broad REACTOME_NUCLEAR_EVENTS_KINASE_AND_TRANSCRIPTION_FACTOR_ACTIVATION View Gene Set 0.009503 24 0.04808 85 Genes involved in Nuclear Events (kinase and transcription factor activation) www.broad.mit.e...
Broad REACTOME_PACKAGING_OF_TELOMERE_ENDS View Gene Set 0.009995 49 0.04884 86 Genes involved in Packaging Of Telomere Ends www.broad.mit.e...
Broad REACTOME_RNA_POLYMERASE_III_TRANSCRIPTION_INITIATION View Gene Set 0.009934 29 0.04884 86 Genes involved in RNA Polymerase III Transcription Initiation www.broad.mit.e...
Broad REACTOME_RNA_POLYMERASE_I_PROMOTER_OPENING View Gene Set 0.009932 59 0.04884 86 Genes involved in RNA Polymerase I Promoter Opening www.broad.mit.e...

Gene Set Collection: Broad.c3.MIR

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad TACTTGA MIR-26A MIR-26B View Gene Set 0.000153 258 0.03381 1 Targets of MicroRNA TACTTGA MIR-26A MIR-26B www.broad.mit.e... MIR-26A... MIR-26B...

Gene Set Collection: Broad.c3.TFT

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad SCGGAAGY_V$ELK1_02 View Gene Set 2.137e-10 784 1.314e-07 1 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif SCGGAAGY which matches annotation for ELK1: ELK1 member of ETS oncogene family www.broad.mit.e...
Broad GCCATNTTG_V$YY1_Q6 View Gene Set 4.567e-08 289 1.404e-05 2 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GCCATNTTG which matches annotation for YY1: YY1 transcription factor www.broad.mit.e...
Broad V$NFMUE1_Q6 View Gene Set 1.391e-07 175 2.852e-05 3 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif CGGCCATCT. Motif does not match any known transcription factor www.broad.mit.e...
Broad RCGCANGCGY_V$NRF1_Q6 View Gene Set 2.253e-07 580 3.464e-05 4 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif RCGCANGCGY which matches annotation for NRF1: nuclear respiratory factor 1 www.broad.mit.e...
Broad V$E2F1_Q6 View Gene Set 1.718e-05 167 0.002113 5 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TTTSGCGS which matches annotation for E2F1: E2F transcription factor 1 www.broad.mit.e...
Broad GATTGGY_V$NFY_Q6_01 View Gene Set 2.233e-05 830 0.002289 6 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif GATTGGY. Motif does not match any known transcription factor www.broad.mit.e...
Broad GGGCGGR_V$SP1_Q6 View Gene Set 3.055e-05 2120 0.002684 7 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GGGCGGR which matches annotation for SP1: Sp1 transcription factor www.broad.mit.e...
Broad V$E2F_Q4 View Gene Set 7.785e-05 166 0.004788 8 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif TTTSGCGS. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$E2F1_Q3 View Gene Set 7.466e-05 176 0.004788 8 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NKTSSCGC which matches annotation for E2F1: E2F transcription factor 1 www.broad.mit.e...
Broad V$E2F1_Q6_01 View Gene Set 6.614e-05 177 0.004788 8 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NTTTCGCGCS which matches annotation for E2F1: E2F transcription factor 1 www.broad.mit.e...
Broad V$E2F_Q3 View Gene Set 0.000144 162 0.007379 11 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif TTTCGCGC. Motif does not match any known transcription factor www.broad.mit.e...
Broad SGCGSSAAA_V$E2F1DP2_01 View Gene Set 0.0001393 122 0.007379 11 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif SGCGSSAAA which matches annotation for E2F1: E2F transcription factor 1<br> TFDP1: transcription factor Dp-1<br> RB1: retinoblastoma 1 (including osteosarcoma) www.broad.mit.e...
Broad V$E2F_Q6 View Gene Set 0.0002084 165 0.00746 13 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif TTTSGCGS. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$E2F1DP1_01 View Gene Set 0.0001828 169 0.00746 13 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TTTCSCGC which matches annotation for E2F1: E2F transcription factor 1<br> TFDP1: transcription factor Dp-1 www.broad.mit.e...
Broad V$E2F1DP2_01 View Gene Set 0.0001828 169 0.00746 13 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TTTSSCGC which matches annotation for E2F1: E2F transcription factor 1<br> TFDP2: transcription factor Dp-2 (E2F dimerization partner 2) www.broad.mit.e...
Broad V$E2F4DP1_01 View Gene Set 0.0002177 174 0.00746 13 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TTTSGCGC which matches annotation for E2F4: E2F transcription factor 4 p107/p130-binding<br> TFDP1: transcription factor Dp-1 www.broad.mit.e...
Broad V$E2F4DP2_01 View Gene Set 0.0001828 169 0.00746 13 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TTTCSCGC which matches annotation for E2F4: E2F transcription factor 4 p107/p130-binding<br> TFDP2: transcription factor Dp-2 (E2F dimerization partner 2) www.broad.mit.e...
Broad GKCGCNNNNNNNTGAYG_UNKNOWN View Gene Set 0.0002184 41 0.00746 13 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif GKCGCNNNNNNNTGAYG. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$E2F_02 View Gene Set 0.0002594 169 0.007655 19 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif TTTSGCGC. Motif does not match any known transcription factor www.broad.mit.e...
Broad GGCNKCCATNK_UNKNOWN View Gene Set 0.0002496 84 0.007655 19 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif GGCNKCCATNK. Motif does not match any known transcription factor www.broad.mit.e...
Broad TGCGCANK_UNKNOWN View Gene Set 0.0002614 361 0.007655 19 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif TGCGCANK. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$E2F_01 View Gene Set 0.0003249 55 0.009083 22 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif TWSGCGCGAAAAYKR. Motif does not match any known transcription factor www.broad.mit.e...
Broad TAANNYSGCG_UNKNOWN View Gene Set 0.0004352 60 0.01164 23 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif TAANNYSGCG. Motif does not match any known transcription factor www.broad.mit.e...
Broad GATGKMRGCG_UNKNOWN View Gene Set 0.0005407 47 0.01385 24 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif GATGKMRGCG. Motif does not match any known transcription factor www.broad.mit.e...
Broad KCCGNSWTTT_UNKNOWN View Gene Set 0.0007209 76 0.01773 25 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif KCCGNSWTTT. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$MYCMAX_01 View Gene Set 0.0008402 189 0.01918 26 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNACCACGTGGTNN which matches annotation for MYC: v-myc myelocytomatosis viral oncogene homolog (avian)<br> MAX: MYC associated factor X www.broad.mit.e...
Broad V$E2F_03 View Gene Set 0.0008419 171 0.01918 26 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif TTTSGCGCGMNR. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$E2F_Q3_01 View Gene Set 0.0009408 171 0.02066 28 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TTTSGCGSG which matches annotation for E2F<br> TFDP1: transcription factor Dp-1 www.broad.mit.e...
Broad CACGTG_V$MYC_Q2 View Gene Set 0.001032 734 0.02189 29 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif CACGTG which matches annotation for MYC: v-myc myelocytomatosis viral oncogene homolog (avian) www.broad.mit.e...
Broad V$E2F1DP1RB_01 View Gene Set 0.001717 168 0.03519 30 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TTTSGCGC which matches annotation for E2F1: E2F transcription factor 1<br> TFDP1: transcription factor Dp-1<br> RB1: retinoblastoma 1 (including osteosarcoma) www.broad.mit.e...
Broad V$YY1_Q6 View Gene Set 0.001954 166 0.03877 31 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GCCATNTTN which matches annotation for YY1: YY1 transcription factor www.broad.mit.e...
Broad V$ELK1_02 View Gene Set 0.002269 170 0.0436 32 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNNNCCGGAARTNN which matches annotation for ELK1: ELK1 member of ETS oncogene family www.broad.mit.e...
Broad V$YY1_02 View Gene Set 0.002379 168 0.04433 33 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNNCGGCCATCTTGNCTSNW which matches annotation for YY1: YY1 transcription factor www.broad.mit.e...

Gene Set Collection: Broad.c4.CGN

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad GNF2_CCNA2 View Gene Set 2.075e-28 62 8.859e-26 1 Neighborhood of CCNA2 www.broad.mit.e...
Broad GNF2_CDC20 View Gene Set 6.494e-27 52 1.386e-24 2 Neighborhood of CDC20 www.broad.mit.e...
Broad GNF2_CCNB2 View Gene Set 1.527e-26 53 2.173e-24 3 Neighborhood of CCNB2 www.broad.mit.e...
Broad GNF2_CDC2 View Gene Set 4.36e-24 56 4.654e-22 4 Neighborhood of CDC2 www.broad.mit.e...
Broad GNF2_CENPF View Gene Set 1.263e-23 56 1.079e-21 5 Neighborhood of CENPF www.broad.mit.e...
Broad GNF2_RRM1 View Gene Set 2.488e-23 82 1.77e-21 6 Neighborhood of RRM1 www.broad.mit.e...
Broad GNF2_PCNA View Gene Set 6.311e-23 62 3.85e-21 7 Neighborhood of PCNA www.broad.mit.e...
Broad GNF2_HMMR View Gene Set 1.436e-21 43 7.666e-20 8 Neighborhood of HMMR www.broad.mit.e...
Broad MORF_RAD23A View Gene Set 5.884e-21 316 2.792e-19 9 Neighborhood of RAD23A www.broad.mit.e...
Broad GNF2_SMC4L1 View Gene Set 1.482e-20 75 6.328e-19 10 Neighborhood of SMC4L1 www.broad.mit.e...
Broad GNF2_ESPL1 View Gene Set 2.715e-20 35 1.054e-18 11 Neighborhood of ESPL1 www.broad.mit.e...
Broad MORF_BUB3 View Gene Set 3.333e-20 256 1.186e-18 12 Neighborhood of BUB3 www.broad.mit.e...
Broad GNF2_MCM4 View Gene Set 1.477e-18 50 4.851e-17 13 Neighborhood of MCM4 www.broad.mit.e...
Broad GNF2_BUB1B View Gene Set 3.09e-18 46 9.426e-17 14 Neighborhood of BUB1B www.broad.mit.e...
Broad GNF2_CKS2 View Gene Set 9.017e-18 45 2.567e-16 15 Neighborhood of CKS2 www.broad.mit.e...
Broad GNF2_CENPE View Gene Set 4.223e-17 37 1.127e-15 16 Neighborhood of CENPE www.broad.mit.e...
Broad MORF_SOD1 View Gene Set 6.803e-17 247 1.709e-15 17 Neighborhood of SOD1 www.broad.mit.e...
Broad GNF2_RFC4 View Gene Set 7.688e-17 57 1.824e-15 18 Neighborhood of RFC4 www.broad.mit.e...
Broad MORF_CSNK2B View Gene Set 9.642e-17 256 2.059e-15 19 Neighborhood of CSNK2B www.broad.mit.e...
Broad GNF2_RFC3 View Gene Set 9.587e-17 38 2.059e-15 19 Neighborhood of RFC3 www.broad.mit.e...
Broad MORF_HDAC2 View Gene Set 2.499e-16 256 5.081e-15 21 Neighborhood of HDAC2 www.broad.mit.e...
Broad GNF2_RRM2 View Gene Set 3.376e-16 36 6.552e-15 22 Neighborhood of RRM2 www.broad.mit.e...
Broad GNF2_CKS1B View Gene Set 8.569e-16 36 1.591e-14 23 Neighborhood of CKS1B www.broad.mit.e...
Broad MORF_RFC4 View Gene Set 4.22e-15 137 7.507e-14 24 Neighborhood of RFC4 www.broad.mit.e...
Broad MORF_DEK View Gene Set 5.301e-15 229 9.055e-14 25 Neighborhood of DEK www.broad.mit.e...
Broad GNF2_TTK View Gene Set 7.468e-15 34 1.227e-13 26 Neighborhood of TTK www.broad.mit.e...
Broad MORF_GNB1 View Gene Set 1.746e-14 276 2.761e-13 27 Neighborhood of GNB1 www.broad.mit.e...
Broad MORF_AATF View Gene Set 1.932e-14 179 2.947e-13 28 Neighborhood of AATF www.broad.mit.e...
Broad GNF2_H2AFX View Gene Set 2.254e-14 28 3.319e-13 29 Neighborhood of H2AFX www.broad.mit.e...
Broad MORF_XRCC5 View Gene Set 2.677e-14 210 3.687e-13 30 Neighborhood of XRCC5 www.broad.mit.e...
Broad GNF2_MKI67 View Gene Set 2.598e-14 26 3.687e-13 30 Neighborhood of MKI67 www.broad.mit.e...
Broad MORF_PPP1CC View Gene Set 7.605e-14 150 1.015e-12 32 Neighborhood of PPP1CC www.broad.mit.e...
Broad GNF2_PA2G4 View Gene Set 9.798e-14 73 1.268e-12 33 Neighborhood of PA2G4 www.broad.mit.e...
Broad MORF_HAT1 View Gene Set 1.442e-13 155 1.811e-12 34 Neighborhood of HAT1 www.broad.mit.e...
Broad MORF_EIF3S2 View Gene Set 2.027e-13 220 2.473e-12 35 Neighborhood of EIF3S2 www.broad.mit.e...
Broad MORF_RAN View Gene Set 2.308e-13 242 2.738e-12 36 Neighborhood of RAN www.broad.mit.e...
Broad GNF2_FEN1 View Gene Set 2.62e-13 49 3.024e-12 37 Neighborhood of FEN1 www.broad.mit.e...
Broad GNF2_RAN View Gene Set 4.283e-13 78 4.813e-12 38 Neighborhood of RAN www.broad.mit.e...
Broad MORF_PRKDC View Gene Set 6.88e-13 173 7.533e-12 39 Neighborhood of PRKDC www.broad.mit.e...
Broad GNF2_BUB1 View Gene Set 1.061e-12 25 1.132e-11 40 Neighborhood of BUB1 www.broad.mit.e...
Broad MORF_DAP3 View Gene Set 1.325e-12 175 1.348e-11 41 Neighborhood of DAP3 www.broad.mit.e...
Broad GNF2_SMC2L1 View Gene Set 1.307e-12 30 1.348e-11 41 Neighborhood of SMC2L1 www.broad.mit.e...
Broad GNF2_MCM5 View Gene Set 3.503e-12 51 3.479e-11 43 Neighborhood of MCM5 www.broad.mit.e...
Broad MORF_HDAC1 View Gene Set 7.439e-12 222 7.219e-11 44 Neighborhood of HDAC1 www.broad.mit.e...
Broad MORF_RAD21 View Gene Set 1.193e-11 157 1.132e-10 45 Neighborhood of RAD21 www.broad.mit.e...
Broad MORF_G22P1 View Gene Set 3.732e-11 145 3.464e-10 46 Neighborhood of G22P1 www.broad.mit.e...
Broad MORF_FEN1 View Gene Set 4.063e-11 58 3.615e-10 47 Neighborhood of FEN1 www.broad.mit.e...
Broad MORF_SKP1A View Gene Set 4.027e-11 175 3.615e-10 47 Neighborhood of SKP1A www.broad.mit.e...
Broad MORF_PRKAG1 View Gene Set 6.247e-11 202 5.444e-10 49 Neighborhood of PRKAG1 www.broad.mit.e...
Broad MORF_ANP32B View Gene Set 1.906e-10 174 1.628e-09 50 Neighborhood of ANP32B www.broad.mit.e...
Broad GNF2_APEX1 View Gene Set 2.369e-10 72 1.984e-09 51 Neighborhood of APEX1 www.broad.mit.e...
Broad GNF2_HAT1 View Gene Set 2.576e-10 45 2.115e-09 52 Neighborhood of HAT1 www.broad.mit.e...
Broad MORF_DNMT1 View Gene Set 2.784e-10 105 2.243e-09 53 Neighborhood of DNMT1 www.broad.mit.e...
Broad MORF_UBE2I View Gene Set 2.967e-10 208 2.346e-09 54 Neighborhood of UBE2I www.broad.mit.e...
Broad MORF_RRM1 View Gene Set 3.114e-10 90 2.418e-09 55 Neighborhood of RRM1 www.broad.mit.e...
Broad MORF_FBL View Gene Set 3.261e-10 121 2.486e-09 56 Neighborhood of FBL www.broad.mit.e...
Broad MORF_DDB1 View Gene Set 3.558e-10 220 2.666e-09 57 Neighborhood of DDB1 www.broad.mit.e...
Broad MORF_ERH View Gene Set 4.592e-10 103 3.381e-09 58 Neighborhood of ERH www.broad.mit.e...
Broad MORF_PSMC1 View Gene Set 4.691e-10 162 3.395e-09 59 Neighborhood of PSMC1 www.broad.mit.e...
Broad MORF_PCNA View Gene Set 7.238e-10 71 5.151e-09 60 Neighborhood of PCNA www.broad.mit.e...
Broad MORF_PPP1CA View Gene Set 9.157e-10 145 6.41e-09 61 Neighborhood of PPP1CA www.broad.mit.e...
Broad MORF_RAD23B View Gene Set 1.189e-09 159 8.187e-09 62 Neighborhood of RAD23B www.broad.mit.e...
Broad MORF_EI24 View Gene Set 1.778e-09 136 1.205e-08 63 Neighborhood of EI24 www.broad.mit.e...
Broad MORF_CTBP1 View Gene Set 2.677e-09 149 1.786e-08 64 Neighborhood of CTBP1 www.broad.mit.e...
Broad MORF_ESPL1 View Gene Set 4.561e-09 58 2.98e-08 65 Neighborhood of ESPL1 www.broad.mit.e...
Broad GCM_APEX1 View Gene Set 4.606e-09 102 2.98e-08 65 Neighborhood of APEX1 www.broad.mit.e...
Broad MORF_ACP1 View Gene Set 6.329e-09 178 4.034e-08 67 Neighborhood of ACP1 www.broad.mit.e...
Broad MORF_UNG View Gene Set 7.539e-09 65 4.734e-08 68 Neighborhood of UNG www.broad.mit.e...
Broad GNF2_DEK View Gene Set 8.09e-09 45 5.007e-08 69 Neighborhood of DEK www.broad.mit.e...
Broad MORF_UBE2N View Gene Set 9.004e-09 79 5.492e-08 70 Neighborhood of UBE2N www.broad.mit.e...
Broad MORF_BUB1 View Gene Set 1.127e-08 49 6.776e-08 71 Neighborhood of BUB1 www.broad.mit.e...
Broad MORF_PTPN11 View Gene Set 1.935e-08 93 1.147e-07 72 Neighborhood of PTPN11 www.broad.mit.e...
Broad MORF_RPA2 View Gene Set 2.847e-08 170 1.665e-07 73 Neighborhood of RPA2 www.broad.mit.e...
Broad MORF_GSPT1 View Gene Set 2.943e-08 41 1.698e-07 74 Neighborhood of GSPT1 www.broad.mit.e...
Broad MORF_RPA1 View Gene Set 4.279e-08 55 2.436e-07 75 Neighborhood of RPA1 www.broad.mit.e...
Broad GNF2_FBL View Gene Set 5.315e-08 119 2.986e-07 76 Neighborhood of FBL www.broad.mit.e...
Broad GCM_ACTG1 View Gene Set 1.672e-07 113 9.273e-07 77 Neighborhood of ACTG1 www.broad.mit.e...
Broad MORF_PSMC2 View Gene Set 2.091e-07 100 1.145e-06 78 Neighborhood of PSMC2 www.broad.mit.e...
Broad GNF2_MLH1 View Gene Set 2.496e-07 36 1.349e-06 79 Neighborhood of MLH1 www.broad.mit.e...
Broad MORF_BUB1B View Gene Set 2.601e-07 61 1.388e-06 80 Neighborhood of BUB1B www.broad.mit.e...
Broad MORF_PPP2CA View Gene Set 2.74e-07 110 1.444e-06 81 Neighborhood of PPP2CA www.broad.mit.e...
Broad MORF_MSH2 View Gene Set 2.792e-07 52 1.454e-06 82 Neighborhood of MSH2 www.broad.mit.e...
Broad MORF_CDC16 View Gene Set 3.56e-07 67 1.832e-06 83 Neighborhood of CDC16 www.broad.mit.e...
Broad GNF2_KPNB1 View Gene Set 4.279e-07 52 2.175e-06 84 Neighborhood of KPNB1 www.broad.mit.e...
Broad GNF2_MSH2 View Gene Set 6.176e-07 26 3.103e-06 85 Neighborhood of MSH2 www.broad.mit.e...
Broad MORF_EIF4E View Gene Set 9.001e-07 76 4.469e-06 86 Neighborhood of EIF4E www.broad.mit.e...
Broad GNF2_ANP32B View Gene Set 9.873e-07 29 4.846e-06 87 Neighborhood of ANP32B www.broad.mit.e...
Broad MORF_PHB View Gene Set 1.035e-06 112 5.023e-06 88 Neighborhood of PHB www.broad.mit.e...
Broad MORF_RAC1 View Gene Set 1.092e-06 196 5.239e-06 89 Neighborhood of RAC1 www.broad.mit.e...
Broad MORF_RAD54L View Gene Set 1.197e-06 94 5.681e-06 90 Neighborhood of RAD54L www.broad.mit.e...
Broad MORF_AP2M1 View Gene Set 1.294e-06 197 6.07e-06 91 Neighborhood of AP2M1 www.broad.mit.e...
Broad MORF_NME2 View Gene Set 1.461e-06 145 6.779e-06 92 Neighborhood of NME2 www.broad.mit.e...
Broad MORF_SMC1L1 View Gene Set 1.532e-06 47 7.036e-06 93 Neighborhood of SMC1L1 www.broad.mit.e...
Broad GCM_CBFB View Gene Set 1.623e-06 59 7.373e-06 94 Neighborhood of CBFB www.broad.mit.e...
Broad MORF_MTA1 View Gene Set 1.848e-06 95 8.307e-06 95 Neighborhood of MTA1 www.broad.mit.e...
Broad MORF_SP3 View Gene Set 1.928e-06 69 8.577e-06 96 Neighborhood of SP3 www.broad.mit.e...
Broad MORF_AP3D1 View Gene Set 2.035e-06 119 8.96e-06 97 Neighborhood of AP3D1 www.broad.mit.e...
Broad MORF_NPM1 View Gene Set 2.244e-06 152 9.776e-06 98 Neighborhood of NPM1 www.broad.mit.e...
Broad GCM_DDX5 View Gene Set 2.603e-06 52 1.123e-05 99 Neighborhood of DDX5 www.broad.mit.e...
Broad MORF_CDC10 View Gene Set 3.022e-06 120 1.29e-05 100 Neighborhood of CDC10 www.broad.mit.e...
Broad MORF_MAP2K2 View Gene Set 3.12e-06 123 1.319e-05 101 Neighborhood of MAP2K2 www.broad.mit.e...
Broad GCM_PPP1CC View Gene Set 3.333e-06 47 1.395e-05 102 Neighborhood of PPP1CC www.broad.mit.e...
Broad GNF2_NPM1 View Gene Set 3.404e-06 57 1.411e-05 103 Neighborhood of NPM1 www.broad.mit.e...
Broad GCM_DFFA View Gene Set 3.626e-06 100 1.489e-05 104 Neighborhood of DFFA www.broad.mit.e...
Broad GNF2_DAP3 View Gene Set 4.28e-06 98 1.741e-05 105 Neighborhood of DAP3 www.broad.mit.e...
Broad MORF_PAPSS1 View Gene Set 4.701e-06 98 1.894e-05 106 Neighborhood of PAPSS1 www.broad.mit.e...
Broad MORF_CCNF View Gene Set 5.323e-06 65 2.124e-05 107 Neighborhood of CCNF www.broad.mit.e...
Broad GNF2_RBBP6 View Gene Set 5.435e-06 54 2.149e-05 108 Neighborhood of RBBP6 www.broad.mit.e...
Broad MORF_PRDX3 View Gene Set 7.3e-06 79 2.86e-05 109 Neighborhood of PRDX3 www.broad.mit.e...
Broad MORF_CDK2 View Gene Set 1.132e-05 63 4.393e-05 110 Neighborhood of CDK2 www.broad.mit.e...
Broad GNF2_EIF3S6 View Gene Set 1.239e-05 109 4.765e-05 111 Neighborhood of EIF3S6 www.broad.mit.e...
Broad GCM_MYST2 View Gene Set 1.281e-05 138 4.883e-05 112 Neighborhood of MYST2 www.broad.mit.e...
Broad GNF2_DENR View Gene Set 1.434e-05 39 5.417e-05 113 Neighborhood of DENR www.broad.mit.e...
Broad GCM_NPM1 View Gene Set 1.694e-05 108 6.344e-05 114 Neighborhood of NPM1 www.broad.mit.e...
Broad MORF_EIF3S6 View Gene Set 2.006e-05 108 7.449e-05 115 Neighborhood of EIF3S6 www.broad.mit.e...
Broad MORF_ACTG1 View Gene Set 2.289e-05 134 8.425e-05 116 Neighborhood of ACTG1 www.broad.mit.e...
Broad GCM_ZNF198 View Gene Set 2.737e-05 98 9.988e-05 117 Neighborhood of ZNF198 www.broad.mit.e...
Broad MORF_BAG5 View Gene Set 3.074e-05 48 0.0001112 118 Neighborhood of BAG5 www.broad.mit.e...
Broad MORF_PRKAR1A View Gene Set 3.384e-05 133 0.0001214 119 Neighborhood of PRKAR1A www.broad.mit.e...
Broad GNF2_HDAC1 View Gene Set 3.555e-05 85 0.0001265 120 Neighborhood of HDAC1 www.broad.mit.e...
Broad MORF_MBD4 View Gene Set 3.681e-05 76 0.0001299 121 Neighborhood of MBD4 www.broad.mit.e...
Broad MORF_EIF4A2 View Gene Set 3.864e-05 120 0.0001342 122 Neighborhood of EIF4A2 www.broad.mit.e...
Broad GNF2_MSH6 View Gene Set 3.866e-05 30 0.0001342 122 Neighborhood of MSH6 www.broad.mit.e...
Broad MORF_USP5 View Gene Set 4.604e-05 46 0.0001585 124 Neighborhood of USP5 www.broad.mit.e...
Broad GCM_ANP32B View Gene Set 5.246e-05 32 0.0001792 125 Neighborhood of ANP32B www.broad.mit.e...
Broad GCM_UBE2N View Gene Set 5.453e-05 125 0.0001848 126 Neighborhood of UBE2N www.broad.mit.e...
Broad GNF2_G22P1 View Gene Set 7.071e-05 29 0.0002377 127 Neighborhood of G22P1 www.broad.mit.e...
Broad GCM_PSME1 View Gene Set 7.237e-05 76 0.000238 128 Neighborhood of PSME1 www.broad.mit.e...
Broad GCM_CSNK2B View Gene Set 7.244e-05 88 0.000238 128 Neighborhood of CSNK2B www.broad.mit.e...
Broad GCM_RAB10 View Gene Set 7.159e-05 143 0.000238 128 Neighborhood of RAB10 www.broad.mit.e...
Broad GNF2_TDG View Gene Set 7.655e-05 23 0.0002495 131 Neighborhood of TDG www.broad.mit.e...
Broad GNF2_XRCC5 View Gene Set 9.252e-05 61 0.0002993 132 Neighborhood of XRCC5 www.broad.mit.e...
Broad GNF2_NS View Gene Set 0.0001009 35 0.000324 133 Neighborhood of NS www.broad.mit.e...
Broad MORF_TERF2IP View Gene Set 0.0001061 99 0.0003381 134 Neighborhood of TERF2IP www.broad.mit.e...
Broad MORF_CUL1 View Gene Set 0.0001364 62 0.0004315 135 Neighborhood of CUL1 www.broad.mit.e...
Broad MORF_PPP2R5E View Gene Set 0.0001549 76 0.000485 136 Neighborhood of PPP2R5E www.broad.mit.e...
Broad MORF_PPP6C View Gene Set 0.0001556 88 0.000485 136 Neighborhood of PPP6C www.broad.mit.e...
Broad MORF_RFC1 View Gene Set 0.0001605 98 0.0004965 138 Neighborhood of RFC1 www.broad.mit.e...
Broad MORF_GMPS View Gene Set 0.0001876 48 0.0005762 139 Neighborhood of GMPS www.broad.mit.e...
Broad GCM_RAF1 View Gene Set 0.0002286 34 0.0006971 140 Neighborhood of RAF1 www.broad.mit.e...
Broad MORF_DEAF1 View Gene Set 0.0002554 54 0.0007679 141 Neighborhood of DEAF1 www.broad.mit.e...
Broad MORF_RAB1A View Gene Set 0.0002537 179 0.0007679 141 Neighborhood of RAB1A www.broad.mit.e...
Broad MORF_BMI1 View Gene Set 0.0002581 71 0.0007708 143 Neighborhood of BMI1 www.broad.mit.e...
Broad GCM_NF2 View Gene Set 0.0002849 235 0.0008448 144 Neighborhood of NF2 www.broad.mit.e...
Broad GNF2_SMC1L1 View Gene Set 0.0003279 24 0.0009655 145 Neighborhood of SMC1L1 www.broad.mit.e...
Broad GCM_TPR View Gene Set 0.0003724 29 0.001089 146 Neighborhood of TPR www.broad.mit.e...
Broad GCM_RAD21 View Gene Set 0.0007451 30 0.002164 147 Neighborhood of RAD21 www.broad.mit.e...
Broad GCM_TPT1 View Gene Set 0.00078 69 0.002251 148 Neighborhood of TPT1 www.broad.mit.e...
Broad MORF_TPT1 View Gene Set 0.001157 100 0.003316 149 Neighborhood of TPT1 www.broad.mit.e...
Broad MORF_TPR View Gene Set 0.001167 131 0.003322 150 Neighborhood of TPR www.broad.mit.e...
Broad GCM_ING1 View Gene Set 0.001201 50 0.003396 151 Neighborhood of ING1 www.broad.mit.e...
Broad MORF_SART1 View Gene Set 0.001209 55 0.003396 152 Neighborhood of SART1 www.broad.mit.e...
Broad MORF_RAF1 View Gene Set 0.001271 94 0.003547 153 Neighborhood of RAF1 www.broad.mit.e...
Broad GCM_GSPT1 View Gene Set 0.001453 129 0.004027 154 Neighborhood of GSPT1 www.broad.mit.e...
Broad GNF2_BUB3 View Gene Set 0.001462 22 0.004027 154 Neighborhood of BUB3 www.broad.mit.e...
Broad MORF_RAB11A View Gene Set 0.00151 53 0.004133 156 Neighborhood of RAB11A www.broad.mit.e...
Broad GCM_CHUK View Gene Set 0.001604 61 0.004363 157 Neighborhood of CHUK www.broad.mit.e...
Broad GCM_RBM8A View Gene Set 0.001626 64 0.004396 158 Neighborhood of RBM8A www.broad.mit.e...
Broad MORF_CCNI View Gene Set 0.001655 76 0.004446 159 Neighborhood of CCNI www.broad.mit.e...
Broad MORF_PPP2R4 View Gene Set 0.001702 44 0.004541 160 Neighborhood of PPP2R4 www.broad.mit.e...
Broad GNF2_ST13 View Gene Set 0.001821 56 0.00483 161 Neighborhood of ST13 www.broad.mit.e...
Broad MORF_JUND View Gene Set 0.001862 63 0.004908 162 Neighborhood of JUND www.broad.mit.e...
Broad GNF2_PPP6C View Gene Set 0.001909 33 0.005002 163 Neighborhood of PPP6C www.broad.mit.e...
Broad MORF_ATOX1 View Gene Set 0.001951 72 0.00508 164 Neighborhood of ATOX1 www.broad.mit.e...
Broad GCM_SMARCC1 View Gene Set 0.002221 33 0.005748 165 Neighborhood of SMARCC1 www.broad.mit.e...
Broad MORF_RAB5A View Gene Set 0.00234 83 0.006018 166 Neighborhood of RAB5A www.broad.mit.e...
Broad GCM_CSNK1D View Gene Set 0.002553 24 0.006526 167 Neighborhood of CSNK1D www.broad.mit.e...
Broad GCM_SUFU View Gene Set 0.002931 62 0.007448 168 Neighborhood of SUFU www.broad.mit.e...
Broad MORF_SS18 View Gene Set 0.003802 55 0.009607 169 Neighborhood of SS18 www.broad.mit.e...
Broad MORF_DAP View Gene Set 0.003831 72 0.009622 170 Neighborhood of DAP www.broad.mit.e...
Broad GCM_HBP1 View Gene Set 0.00441 54 0.01101 171 Neighborhood of HBP1 www.broad.mit.e...
Broad GCM_DENR View Gene Set 0.00551 40 0.01368 172 Neighborhood of DENR www.broad.mit.e...
Broad MORF_XPC View Gene Set 0.005887 55 0.01453 173 Neighborhood of XPC www.broad.mit.e...
Broad GNF2_RPA1 View Gene Set 0.006449 20 0.01583 174 Neighborhood of RPA1 www.broad.mit.e...
Broad GCM_FANCL View Gene Set 0.007538 19 0.01839 175 Neighborhood of FANCL www.broad.mit.e...
Broad GCM_TINF2 View Gene Set 0.00773 33 0.01875 176 Neighborhood of TINF2 www.broad.mit.e...
Broad MORF_RAB6A View Gene Set 0.009823 63 0.0237 177 Neighborhood of RAB6A www.broad.mit.e...
Broad MORF_UBE2A View Gene Set 0.01062 44 0.02548 178 Neighborhood of UBE2A www.broad.mit.e...
Broad MORF_TERF1 View Gene Set 0.01123 57 0.02678 179 Neighborhood of TERF1 www.broad.mit.e...
Broad GCM_PFN1 View Gene Set 0.0118 47 0.02798 180 Neighborhood of PFN1 www.broad.mit.e...
Broad GCM_BCL2L1 View Gene Set 0.01209 25 0.02853 181 Neighborhood of BCL2L1 www.broad.mit.e...
Broad MORF_SNRP70 View Gene Set 0.01299 50 0.03049 182 Neighborhood of SNRP70 www.broad.mit.e...
Broad GCM_MAX View Gene Set 0.01479 28 0.03451 183 Neighborhood of MAX www.broad.mit.e...
Broad GCM_AIP View Gene Set 0.0151 36 0.03503 184 Neighborhood of AIP www.broad.mit.e...
Broad GCM_MLL View Gene Set 0.01626 130 0.03754 185 Neighborhood of MLL www.broad.mit.e...
Broad MORF_BECN1 View Gene Set 0.01744 93 0.04005 186 Neighborhood of BECN1 www.broad.mit.e...
Broad GNF2_DDX5 View Gene Set 0.01773 54 0.04048 187 Neighborhood of DDX5 www.broad.mit.e...
Broad GNF2_UBE2I View Gene Set 0.02041 33 0.04635 188 Neighborhood of UBE2I www.broad.mit.e...

Gene Set Collection: Broad.c4.CM

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad module_54 View Gene Set 2.441e-27 242 1.108e-24 1 Genes in module_54 www.broad.mit.e...
Broad module_17 View Gene Set 1.695e-18 351 3.849e-16 2 Genes in module_17 www.broad.mit.e...
Broad module_8 View Gene Set 3.721e-17 403 5.631e-15 3 Genes in module_8 www.broad.mit.e...
Broad module_198 View Gene Set 1.363e-16 288 1.546e-14 4 Genes in module_198 www.broad.mit.e...
Broad module_98 View Gene Set 7.158e-16 375 6.5e-14 5 Genes in module_98 www.broad.mit.e...
Broad module_252 View Gene Set 9.701e-16 224 7.34e-14 6 Genes in module_252 www.broad.mit.e...
Broad module_3 View Gene Set 4.498e-14 374 2.917e-12 7 Genes in module_3 www.broad.mit.e...
Broad module_124 View Gene Set 1.749e-13 92 9.927e-12 8 Genes in module_124 www.broad.mit.e...
Broad module_57 View Gene Set 1.858e-10 54 9.371e-09 9 Genes in module_57 www.broad.mit.e...
Broad module_32 View Gene Set 3.332e-10 227 1.513e-08 10 Genes in module_32 www.broad.mit.e...
Broad module_18 View Gene Set 1.477e-09 434 6.097e-08 11 Genes in module_18 www.broad.mit.e...
Broad module_244 View Gene Set 1.28e-07 182 4.841e-06 12 Genes in module_244 www.broad.mit.e...
Broad module_83 View Gene Set 1.942e-07 296 6.296e-06 13 Genes in module_83 www.broad.mit.e...
Broad module_337 View Gene Set 1.873e-07 59 6.296e-06 13 Genes in module_337 www.broad.mit.e...
Broad module_403 View Gene Set 8.179e-07 44 2.475e-05 15 Genes in module_403 www.broad.mit.e...
Broad module_126 View Gene Set 2.472e-06 173 7.013e-05 16 Genes in module_126 www.broad.mit.e...
Broad module_72 View Gene Set 4.073e-06 293 0.0001088 17 Genes in module_72 www.broad.mit.e...
Broad module_114 View Gene Set 7.113e-06 314 0.00017 18 Genes in module_114 www.broad.mit.e...
Broad module_168 View Gene Set 7.034e-06 22 0.00017 18 Genes in module_168 www.broad.mit.e...
Broad module_320 View Gene Set 1.066e-05 19 0.000242 20 Genes in module_320 www.broad.mit.e...
Broad module_151 View Gene Set 1.299e-05 297 0.0002794 21 Genes in module_151 www.broad.mit.e...
Broad module_158 View Gene Set 1.373e-05 41 0.0002794 21 Genes in module_158 www.broad.mit.e...
Broad module_315 View Gene Set 1.416e-05 15 0.0002794 21 Genes in module_315 www.broad.mit.e...
Broad module_52 View Gene Set 1.962e-05 415 0.0003562 24 Genes in module_52 www.broad.mit.e...
Broad module_197 View Gene Set 1.932e-05 170 0.0003562 24 Genes in module_197 www.broad.mit.e...
Broad module_222 View Gene Set 2.183e-05 22 0.0003811 26 Genes in module_222 www.broad.mit.e...
Broad module_552 View Gene Set 2.738e-05 18 0.0004603 27 Genes in module_552 www.broad.mit.e...
Broad module_397 View Gene Set 2.905e-05 114 0.000471 28 Genes in module_397 www.broad.mit.e...
Broad module_451 View Gene Set 3.362e-05 29 0.0005263 29 Genes in module_451 www.broad.mit.e...
Broad module_125 View Gene Set 3.793e-05 42 0.0005555 30 Genes in module_125 www.broad.mit.e...
Broad module_183 View Gene Set 3.779e-05 52 0.0005555 30 Genes in module_183 www.broad.mit.e...
Broad module_239 View Gene Set 5.249e-05 112 0.0007446 32 Genes in module_239 www.broad.mit.e...
Broad module_392 View Gene Set 5.995e-05 18 0.0008248 33 Genes in module_392 www.broad.mit.e...
Broad module_89 View Gene Set 0.0001663 14 0.002221 34 Genes in module_89 www.broad.mit.e...
Broad module_331 View Gene Set 0.0002173 65 0.002819 35 Genes in module_331 www.broad.mit.e...
Broad module_127 View Gene Set 0.0002641 26 0.003331 36 Genes in module_127 www.broad.mit.e...
Broad module_189 View Gene Set 0.0003136 23 0.003782 37 Genes in module_189 www.broad.mit.e...
Broad module_388 View Gene Set 0.0003165 17 0.003782 37 Genes in module_388 www.broad.mit.e...
Broad module_308 View Gene Set 0.0003938 66 0.004584 39 Genes in module_308 www.broad.mit.e...
Broad module_203 View Gene Set 0.0004427 16 0.005024 40 Genes in module_203 www.broad.mit.e...
Broad module_90 View Gene Set 0.0005772 17 0.006391 41 Genes in module_90 www.broad.mit.e...
Broad module_421 View Gene Set 0.0007257 23 0.007844 42 Genes in module_421 www.broad.mit.e...
Broad module_457 View Gene Set 0.0008716 9 0.009202 43 Genes in module_457 www.broad.mit.e...
Broad module_159 View Gene Set 0.0009942 81 0.01026 44 Genes in module_159 www.broad.mit.e...
Broad module_219 View Gene Set 0.001131 26 0.01141 45 Genes in module_219 www.broad.mit.e...
Broad module_62 View Gene Set 0.001326 88 0.01309 46 Genes in module_62 www.broad.mit.e...
Broad module_277 View Gene Set 0.001392 48 0.01345 47 Genes in module_277 www.broad.mit.e...
Broad module_278 View Gene Set 0.001756 34 0.01661 48 Genes in module_278 www.broad.mit.e...
Broad module_16 View Gene Set 0.002388 495 0.02212 49 Genes in module_16 www.broad.mit.e...
Broad module_36 View Gene Set 0.002876 146 0.02611 50 Genes in module_36 www.broad.mit.e...
Broad module_77 View Gene Set 0.003404 28 0.0303 51 Genes in module_77 www.broad.mit.e...
Broad module_42 View Gene Set 0.004305 25 0.03758 52 Genes in module_42 www.broad.mit.e...
Broad module_155 View Gene Set 0.004738 25 0.04059 53 Genes in module_155 www.broad.mit.e...
Broad module_152 View Gene Set 0.00486 121 0.04086 54 Genes in module_152 www.broad.mit.e...
Broad module_352 View Gene Set 0.005947 17 0.04909 55 Genes in module_352 www.broad.mit.e...

Gene Set Collection: Broad.c5.BP

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad NUCLEOBASENUCLEOSIDENUCLEOTIDE_AND_NUCLEIC_ACID_METABOLIC_PROCESS View Gene Set 4.814e-16 1197 1.986e-13 1 Genes annotated by the GO term GO:0006139. The chemical reactions and pathways involving nucleobases nucleosides nucleotides and nucleic acids. www.broad.mit.e...
Broad CELL_CYCLE_GO_0007049 View Gene Set 2.673e-16 304 1.986e-13 1 Genes annotated by the GO term GO:0007049. The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division. www.broad.mit.e...
Broad CELL_CYCLE_PROCESS View Gene Set 6.157e-15 187 1.693e-12 3 Genes annotated by the GO term GO:0022402. A cellular process that is involved in the progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. www.broad.mit.e...
Broad BIOPOLYMER_METABOLIC_PROCESS View Gene Set 5.509e-14 1623 1.136e-11 4 Genes annotated by the GO term GO:0043283. The chemical reactions and pathways involving biopolymers long repeating chains of monomers found in nature e.g. polysaccharides and proteins. www.broad.mit.e...
Broad CELL_CYCLE_PHASE View Gene Set 1.04e-13 167 1.715e-11 5 Genes annotated by the GO term GO:0022403. A cell cycle process comprising the steps by which a cell progresses through one of the biochemical and morphological phases and events that occur during successive cell replication or nuclear replication events. www.broad.mit.e...
Broad MITOTIC_CELL_CYCLE View Gene Set 2.092e-13 148 2.876e-11 6 Genes annotated by the GO term GO:0000278. Progression through the phases of the mitotic cell cycle the most common eukaryotic cell cycle which canonically comprises four successive phases called G1 S G2 and M and includes replication of the genome and the subsequent segregation of chromosomes into daughter cells. In some variant cell cycles nuclear replication or nuclear division may not be followed by cell division or G1 and G2 phases may be absent. www.broad.mit.e...
Broad RNA_PROCESSING View Gene Set 3.037e-13 147 3.58e-11 7 Genes annotated by the GO term GO:0006396. Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules. www.broad.mit.e...
Broad RNA_METABOLIC_PROCESS View Gene Set 6.792e-12 801 7.005e-10 8 Genes annotated by the GO term GO:0016070. The chemical reactions and pathways involving RNA ribonucleic acid one of the two main type of nucleic acid consisting of a long unbranched macromolecule formed from ribonucleotides joined in 3' 5'-phosphodiester linkage. www.broad.mit.e...
Broad M_PHASE View Gene Set 1.728e-10 111 1.584e-08 9 Genes annotated by the GO term GO:0000279. Progression through M phase the part of the cell cycle comprising nuclear division. www.broad.mit.e...
Broad M_PHASE_OF_MITOTIC_CELL_CYCLE View Gene Set 1.016e-09 83 8.385e-08 10 Genes annotated by the GO term GO:0000087. Progression through M phase the part of the mitotic cell cycle during which mitosis takes place. www.broad.mit.e...
Broad MITOSIS View Gene Set 3.503e-09 81 2.627e-07 11 Genes annotated by the GO term GO:0007067. Progression through mitosis the division of the eukaryotic cell nucleus to produce two daughter nuclei that usually contain the identical chromosome complement to their mother. www.broad.mit.e...
Broad RNA_SPLICING View Gene Set 4.952e-09 73 3.404e-07 12 Genes annotated by the GO term GO:0008380. The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA. www.broad.mit.e...
Broad REGULATION_OF_CELL_CYCLE View Gene Set 4.11e-08 176 2.608e-06 13 Genes annotated by the GO term GO:0051726. Any process that modulates the rate or extent of progression through the cell cycle. www.broad.mit.e...
Broad MRNA_PROCESSING_GO_0006397 View Gene Set 4.512e-07 59 2.659e-05 14 Genes annotated by the GO term GO:0006397. Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide. www.broad.mit.e...
Broad INTERPHASE_OF_MITOTIC_CELL_CYCLE View Gene Set 8.995e-07 62 4.947e-05 15 Genes annotated by the GO term GO:0051329. Progression through interphase the stage of cell cycle between successive rounds of mitosis. Canonically interphase is the stage of the cell cycle during which the biochemical and physiologic functions of the cell are performed and replication of chromatin occurs. www.broad.mit.e...
Broad INTERPHASE View Gene Set 1.446e-06 68 7.458e-05 16 Genes annotated by the GO term GO:0051325. Progression through interphase the stage of cell cycle between successive rounds of chromosome segregation. Canonically interphase is the stage of the cell cycle during which the biochemical and physiologic functions of the cell are performed and replication of chromatin occurs. www.broad.mit.e...
Broad RIBONUCLEOPROTEIN_COMPLEX_BIOGENESIS_AND_ASSEMBLY View Gene Set 2.705e-06 74 0.000124 17 Genes annotated by the GO term GO:0022613. The cellular process by which a complex containing RNA and proteins is synthesized aggregates and bonds together. www.broad.mit.e...
Broad MRNA_METABOLIC_PROCESS View Gene Set 2.576e-06 70 0.000124 17 Genes annotated by the GO term GO:0016071. The chemical reactions and pathways involving mRNA messenger RNA which is responsible for carrying the coded genetic 'message' transcribed from DNA to sites of protein assembly at the ribosomes. www.broad.mit.e...
Broad DNA_REPLICATION View Gene Set 3.438e-06 101 0.0001493 19 Genes annotated by the GO term GO:0006260. The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA. www.broad.mit.e...
Broad TRANSCRIPTION View Gene Set 1.86e-05 738 0.0007675 20 Genes annotated by the GO term GO:0006350. The synthesis of either RNA on a template of DNA or DNA on a template of RNA. www.broad.mit.e...
Broad RNA_BIOSYNTHETIC_PROCESS View Gene Set 2.095e-05 625 0.0008229 21 Genes annotated by the GO term GO:0032774. The chemical reactions and pathways resulting in the formation of RNA ribonucleic acid one of the two main type of nucleic acid consisting of a long unbranched macromolecule formed from ribonucleotides joined in 3' 5'-phosphodiester linkage. Includes polymerization of ribonucleotide monomers. www.broad.mit.e...
Broad TRANSCRIPTION_DNA_DEPENDENT View Gene Set 2.219e-05 623 0.000832 22 Genes annotated by the GO term GO:0006351. The synthesis of RNA on a template of DNA. www.broad.mit.e...
Broad CELL_CYCLE_CHECKPOINT_GO_0000075 View Gene Set 2.477e-05 47 0.0008883 23 Genes annotated by the GO term GO:0000075. A point in the eukaryotic cell cycle where progress through the cycle can be halted until conditions are suitable for the cell to proceed to the next stage. www.broad.mit.e...
Broad RNA_SPLICINGVIA_TRANSESTERIFICATION_REACTIONS View Gene Set 2.71e-05 27 0.0009316 24 Genes annotated by the GO term GO:0000375. Splicing of RNA via a series of two transesterification reactions. www.broad.mit.e...
Broad CHROMOSOME_ORGANIZATION_AND_BIOGENESIS View Gene Set 3.585e-05 117 0.001183 25 Genes annotated by the GO term GO:0051276. A process that is carried out at the cellular level that results in the formation arrangement of constituent parts or disassembly of chromosomes structures composed of a very long molecule of DNA and associated proteins that carries hereditary information. www.broad.mit.e...
Broad DNA_METABOLIC_PROCESS View Gene Set 5.511e-05 253 0.001749 26 Genes annotated by the GO term GO:0006259. The chemical reactions and pathways involving DNA deoxyribonucleic acid one of the two main types of nucleic acid consisting of a long unbranched macromolecule formed from one or more commonly two strands of linked deoxyribonucleotides. www.broad.mit.e...
Broad REGULATION_OF_MITOSIS View Gene Set 7.1e-05 40 0.002169 27 Genes annotated by the GO term GO:0007088. Any process that modulates the frequency rate or extent of mitosis. www.broad.mit.e...
Broad ORGANELLE_LOCALIZATION View Gene Set 7.872e-05 24 0.002319 28 Genes annotated by the GO term GO:0051640. The processes by which an organelle is transported to and/or maintained in a specific location. www.broad.mit.e...
Broad AROMATIC_COMPOUND_METABOLIC_PROCESS View Gene Set 9.097e-05 26 0.002588 29 Genes annotated by the GO term GO:0006725. The chemical reactions and pathways involving aromatic compounds any organic compound characterized by one or more planar rings each of which contains conjugated double bonds and delocalized pi electrons. www.broad.mit.e...
Broad AMINO_ACID_AND_DERIVATIVE_METABOLIC_PROCESS View Gene Set 0.0001635 98 0.004497 30 Genes annotated by the GO term GO:0006519. The chemical reactions and pathways involving amino acids organic acids containing one or more amino substituents and compounds derived from amino acids. www.broad.mit.e...
Broad TRANSCRIPTION_INITIATION View Gene Set 0.0003119 35 0.008042 31 Genes annotated by the GO term GO:0006352. Processes involved in the assembly of the RNA polymerase complex at the promoter region of a DNA template resulting in the subsequent synthesis of RNA from that promoter. www.broad.mit.e...
Broad TRANSCRIPTION_FROM_RNA_POLYMERASE_II_PROMOTER View Gene Set 0.0003109 449 0.008042 31 Genes annotated by the GO term GO:0006366. The synthesis of RNA from a DNA template by RNA polymerase II (Pol II) originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs). www.broad.mit.e...
Broad CELLULAR_LOCALIZATION View Gene Set 0.0003437 360 0.008593 33 Genes annotated by the GO term GO:0051641. The processes by which a substance or cellular entity such as a protein complex or organelle is transported to and/or maintained in a specific location within or in the membrane of a cell. www.broad.mit.e...
Broad TRANSCRIPTION_INITIATION_FROM_RNA_POLYMERASE_II_PROMOTER View Gene Set 0.0003603 29 0.008742 34 Genes annotated by the GO term GO:0006367. Processes involved in starting transcription from the RNA polymerase II promoter. www.broad.mit.e...
Broad CELLULAR_BIOSYNTHETIC_PROCESS View Gene Set 0.0003901 311 0.009196 35 Genes annotated by the GO term GO:0044249. The chemical reactions and pathways resulting in the formation of substances carried out by individual cells. www.broad.mit.e...
Broad ORGANELLE_ORGANIZATION_AND_BIOGENESIS View Gene Set 0.0004015 458 0.0092 36 Genes annotated by the GO term GO:0006996. A process that is carried out at the cellular level which results in the formation arrangement of constituent parts or disassembly of any organelle within a cell. www.broad.mit.e...
Broad BIOSYNTHETIC_PROCESS View Gene Set 0.0004617 459 0.01002 37 Genes annotated by the GO term GO:0009058. The energy-requiring part of metabolism in which simpler substances are transformed into more complex ones as in growth and other biosynthetic processes. www.broad.mit.e...
Broad REGULATION_OF_NUCLEOBASENUCLEOSIDENUCLEOTIDE_AND_NUCLEIC_ACID_METABOLIC_PROCESS View Gene Set 0.0004604 601 0.01002 37 Genes annotated by the GO term GO:0019219. Any process that modulates the frequency rate or extent of the chemical reactions and pathways involving nucleobases nucleosides nucleotides and nucleic acids. www.broad.mit.e...
Broad DNA_DAMAGE_CHECKPOINT View Gene Set 0.0005016 20 0.01034 39 Genes annotated by the GO term GO:0000077. A signal transduction pathway induced by DNA damage that blocks cell cycle progression (in G1 G2 or metaphase) or slows the rate at which S phase proceeds. www.broad.mit.e...
Broad SPINDLE_ORGANIZATION_AND_BIOGENESIS View Gene Set 0.000501 10 0.01034 39 Genes annotated by the GO term GO:0007051. A process that is carried out at the cellular level which results in the formation arrangement of constituent parts or disassembly of the spindle the array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during DNA segregation and serves to move the duplicated chromosomes apart. www.broad.mit.e...
Broad PROTEIN_RNA_COMPLEX_ASSEMBLY View Gene Set 0.0005146 59 0.01035 41 Genes annotated by the GO term GO:0022618. The aggregation arrangement and bonding together of proteins and RNA molecules to form a ribonucleoprotein complex. www.broad.mit.e...
Broad INTRACELLULAR_TRANSPORT View Gene Set 0.0005729 271 0.01087 42 Genes annotated by the GO term GO:0046907. The directed movement of substances within a cell. www.broad.mit.e...
Broad DNA_INTEGRITY_CHECKPOINT View Gene Set 0.0005797 23 0.01087 42 Genes annotated by the GO term GO:0031570. Any cell cycle checkpoint that delays or arrests cell cycle progression in response to changes in DNA structure. www.broad.mit.e...
Broad ESTABLISHMENT_OF_CELLULAR_LOCALIZATION View Gene Set 0.0005798 342 0.01087 42 Genes annotated by the GO term GO:0051649. The directed movement of a substance or cellular entity such as a protein complex or organelle to a specific location within or in the membrane of a cell. www.broad.mit.e...
Broad AMINO_ACID_METABOLIC_PROCESS View Gene Set 0.0006644 75 0.01218 45 Genes annotated by the GO term GO:0006520. The chemical reactions and pathways involving amino acids organic acids containing one or more amino substituents. www.broad.mit.e...
Broad GOLGI_VESICLE_TRANSPORT View Gene Set 0.0007724 47 0.01385 46 Genes annotated by the GO term GO:0048193. The directed movement of substances into out of or within the Golgi apparatus mediated by vesicles. www.broad.mit.e...
Broad CHROMOSOME_SEGREGATION View Gene Set 0.000816 31 0.01432 47 Genes annotated by the GO term GO:0007059. The process by which genetic material in the form of chromosomes is organized and then physically separated and apportioned to two or more sets. www.broad.mit.e...
Broad ORGANIC_ACID_METABOLIC_PROCESS View Gene Set 0.0008548 175 0.01439 48 Genes annotated by the GO term GO:0006082. The chemical reactions and pathways involving organic acids any acidic compound containing carbon in covalent linkage. www.broad.mit.e...
Broad CELLULAR_PROTEIN_METABOLIC_PROCESS View Gene Set 0.0008448 1085 0.01439 48 Genes annotated by the GO term GO:0044267. The chemical reactions and pathways involving a specific protein rather than of proteins in general occurring at the level of an individual cell. Includes protein modification. www.broad.mit.e...
Broad MITOTIC_SPINDLE_ORGANIZATION_AND_BIOGENESIS View Gene Set 0.0009868 9 0.01628 50 Genes annotated by the GO term GO:0007052. A process that is carried out at the cellular level which results in the formation arrangement of constituent parts or disassembly of the microtubule spindle during a mitotic cell cycle. www.broad.mit.e...
Broad MACROMOLECULAR_COMPLEX_ASSEMBLY View Gene Set 0.001116 271 0.01805 51 Genes annotated by the GO term GO:0065003. The aggregation arrangement and bonding together of a set of macromolecules to form a complex. www.broad.mit.e...
Broad CARBOXYLIC_ACID_METABOLIC_PROCESS View Gene Set 0.001186 173 0.01881 52 Genes annotated by the GO term GO:0019752. The chemical reactions and pathways involving carboxylic acids any organic acid containing one or more carboxyl (COOH) groups or anions (COO-). www.broad.mit.e...
Broad REGULATION_OF_CYCLIN_DEPENDENT_PROTEIN_KINASE_ACTIVITY View Gene Set 0.001304 42 0.02029 53 Genes annotated by the GO term GO:0000079. Any process that modulates the frequency rate or extent of CDK activity. www.broad.mit.e...
Broad CELLULAR_MACROMOLECULE_METABOLIC_PROCESS View Gene Set 0.001342 1099 0.0205 54 Genes annotated by the GO term GO:0044260. The chemical reactions and pathways involving macromolecules large molecules including proteins nucleic acids and carbohydrates as carried out by individual cells. www.broad.mit.e...
Broad CELL_CYCLE_ARREST_GO_0007050 View Gene Set 0.001396 56 0.02056 55 Genes annotated by the GO term GO:0007050. Any process by which progression through the cell cycle is halted during one of the normal phases (G1 S G2 M). www.broad.mit.e...
Broad REGULATION_OF_TRANSCRIPTION View Gene Set 0.001379 555 0.02056 55 Genes annotated by the GO term GO:0045449. Any process that modulates the frequency rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA. www.broad.mit.e...
Broad DOUBLE_STRAND_BREAK_REPAIR View Gene Set 0.001576 22 0.02281 57 Genes annotated by the GO term GO:0006302. The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix. www.broad.mit.e...
Broad RESPONSE_TO_ENDOGENOUS_STIMULUS View Gene Set 0.001746 197 0.02483 58 Genes annotated by the GO term GO:0009719. A change in state or activity of a cell or an organism (in terms of movement secretion enzyme production gene expression etc.) as a result of an endogenous stimulus. www.broad.mit.e...
Broad PROTEIN_DNA_COMPLEX_ASSEMBLY View Gene Set 0.00178 48 0.02489 59 Genes annotated by the GO term GO:0065004. The aggregation arrangement and bonding together of proteins and DNA molecules to form a protein-DNA complex. www.broad.mit.e...
Broad REGULATION_OF_TRANSCRIPTIONDNA_DEPENDENT View Gene Set 0.001885 452 0.02549 60 Genes annotated by the GO term GO:0006355. Any process that modulates the frequency rate or extent of DNA-dependent transcription. www.broad.mit.e...
Broad REGULATION_OF_RNA_METABOLIC_PROCESS View Gene Set 0.001856 457 0.02549 60 Genes annotated by the GO term GO:0051252. Any process that modulates the frequency rate or extent of the chemical reactions and pathways involving RNA. www.broad.mit.e...
Broad SPLICEOSOME_ASSEMBLY View Gene Set 0.002221 13 0.02955 62 Genes annotated by the GO term GO:0000245. The aggregation arrangement and bonding together of the spliceosome a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions. www.broad.mit.e...
Broad RESPONSE_TO_DNA_DAMAGE_STIMULUS View Gene Set 0.002265 159 0.02967 63 Genes annotated by the GO term GO:0006974. A change in state or activity of a cell or an organism (in terms of movement secretion enzyme production gene expression etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism. www.broad.mit.e...
Broad HISTONE_MODIFICATION View Gene Set 0.002387 22 0.03077 64 Genes annotated by the GO term GO:0016570. The covalent alteration of one or more amino acid residues within a histone protein. www.broad.mit.e...
Broad ESTABLISHMENT_AND_OR_MAINTENANCE_OF_CHROMATIN_ARCHITECTURE View Gene Set 0.002449 72 0.03108 65 Genes annotated by the GO term GO:0006325. The specification formation and maintenance of the physical structure of eukaryotic chromatin. www.broad.mit.e...
Broad PROTEIN_METABOLIC_PROCESS View Gene Set 0.002504 1198 0.0313 66 Genes annotated by the GO term GO:0019538. The chemical reactions and pathways involving a specific protein rather than of proteins in general. Includes protein modification. www.broad.mit.e...
Broad RIBOSOME_BIOGENESIS_AND_ASSEMBLY View Gene Set 0.002958 14 0.0362 67 Genes annotated by the GO term GO:0042254. The process of the formation of the constituents of the ribosome subunits their assembly and their transport to the sites of protein synthesis. www.broad.mit.e...
Broad DNA_DEPENDENT_DNA_REPLICATION View Gene Set 0.002984 55 0.0362 67 Genes annotated by the GO term GO:0006261. The process whereby new strands of DNA are synthesized using parental DNA as a template for the DNA-dependent DNA polymerases that synthesize the new strands. www.broad.mit.e...
Broad ONE_CARBON_COMPOUND_METABOLIC_PROCESS View Gene Set 0.003331 26 0.03817 69 Genes annotated by the GO term GO:0006730. The chemical reactions and pathways involving compounds containing a single carbon atom. www.broad.mit.e...
Broad VESICLE_MEDIATED_TRANSPORT View Gene Set 0.003293 188 0.03817 69 Genes annotated by the GO term GO:0016192. The directed movement of substances either within a vesicle or in the vesicle membrane into out of or within a cell. www.broad.mit.e...
Broad CHROMOSOME_CONDENSATION View Gene Set 0.003328 10 0.03817 69 Genes annotated by the GO term GO:0030261. The progressive compaction of dispersed interphase chromatin into threadlike chromosomes prior to mitotic or meiotic nuclear division or during apoptosis in eukaryotic cells. www.broad.mit.e...
Broad G1_S_TRANSITION_OF_MITOTIC_CELL_CYCLE View Gene Set 0.003224 27 0.03817 69 Genes annotated by the GO term GO:0000082. Progression from G1 phase to S phase of the mitotic cell cycle. www.broad.mit.e...
Broad ESTABLISHMENT_OF_ORGANELLE_LOCALIZATION View Gene Set 0.00345 17 0.03898 73 Genes annotated by the GO term GO:0051656. The directed movement of an organelle to a specific location. www.broad.mit.e...
Broad CELLULAR_COMPONENT_ASSEMBLY View Gene Set 0.003824 288 0.04151 74 Genes annotated by the GO term GO:0022607. A cellular process that results in the assembly of a part of the cell. www.broad.mit.e...
Broad RRNA_PROCESSING View Gene Set 0.003812 11 0.04151 74 Genes annotated by the GO term GO:0006364. Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules. www.broad.mit.e...
Broad TRANSCRIPTION_FROM_RNA_POLYMERASE_III_PROMOTER View Gene Set 0.003725 19 0.04151 74 Genes annotated by the GO term GO:0006383. The synthesis of RNA from a DNA template by RNA polymerase III (Pol III) originating at a Pol III-specific promoter. www.broad.mit.e...
Broad BASE_EXCISION_REPAIR View Gene Set 0.003876 16 0.04153 77 Genes annotated by the GO term GO:0006284. In base excision repair an altered base is removed by a DNA glycosylase enzyme followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. www.broad.mit.e...
Broad MITOTIC_CELL_CYCLE_CHECKPOINT View Gene Set 0.00406 21 0.04294 78 Genes annotated by the GO term GO:0007093. A signal transduction-based surveillance mechanism that ensures accurate chromosome replication and segregation by preventing progression through a mitotic cell cycle until conditions are suitable for the cell to proceed to the next stage. www.broad.mit.e...
Broad COVALENT_CHROMATIN_MODIFICATION View Gene Set 0.004269 23 0.04458 79 Genes annotated by the GO term GO:0016569. The alteration of DNA or protein in chromatin by the covalent addition or removal of chemical groups. www.broad.mit.e...
Broad REGULATION_OF_GENE_EXPRESSION View Gene Set 0.004359 660 0.04495 80 Genes annotated by the GO term GO:0010468. Any process that modulates the frequency rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form. www.broad.mit.e...
Broad AMINE_BIOSYNTHETIC_PROCESS View Gene Set 0.00467 15 0.04757 81 Genes annotated by the GO term GO:0009309. The chemical reactions and pathways resulting in the formation of any organic compound that is weakly basic in character and contains an amino or a substituted amino group. Amines are called primary secondary or tertiary according to whether one two or three carbon atoms are attached to the nitrogen atom. www.broad.mit.e...
Broad SECRETORY_PATHWAY View Gene Set 0.004864 82 0.04893 82 Genes annotated by the GO term GO:0045045. The pathway along which proteins and other substances are moved around and out of the cell. After synthesis on the ribosomes of the endoplasmic reticulum (ER) completed polypeptide chains are moved to the Golgi complex and subsequently sorted to various destinations. Proteins synthesized and sorted in the secretory pathway include not only those that are secreted from the cell but also enzymes and other resident proteins in the lumen of the ER Golgi and lysosomes as well as integral proteins in the membranes of these organelles and the plasma membrane. www.broad.mit.e...

Gene Set Collection: Broad.c5.CC

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad NUCLEUS View Gene Set 1.258e-36 1353 2.93e-34 1 Genes annotated by the GO term GO:0005634. A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells the nucleus contains all of the cell's chromosomes except the organellar chromosomes and is the site of RNA synthesis and processing. In some species or in specialized cell types RNA metabolism or DNA replication may be absent. www.broad.mit.e...
Broad INTRACELLULAR_ORGANELLE_PART View Gene Set 8.743e-28 1144 1.019e-25 2 Genes annotated by the GO term GO:0044446. A constituent part of an intracellular organelle an organized structure of distinctive morphology and function occurring within the cell. Includes constituent parts of the nucleus mitochondria plastids vacuoles vesicles ribosomes and the cytoskeleton but excludes the plasma membrane. www.broad.mit.e...
Broad ORGANELLE_PART View Gene Set 6.942e-27 1149 5.392e-25 3 Genes annotated by the GO term GO:0044422. Any constituent part of an organelle an organized structure of distinctive morphology and function. Includes constituent parts of the nucleus mitochondria plastids vacuoles vesicles ribosomes and the cytoskeleton but excludes the plasma membrane. www.broad.mit.e...
Broad NUCLEAR_PART View Gene Set 1.646e-24 543 9.589e-23 4 Genes annotated by the GO term GO:0044428. Any constituent part of the nucleus a membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. www.broad.mit.e...
Broad ORGANELLE_LUMEN View Gene Set 2.354e-21 434 9.141e-20 5 Genes annotated by the GO term GO:0043233. The volume enclosed by the membranes of a particular organelle e.g. endoplasmic reticulum lumen or the space between the two lipid bilayers of a double membrane surrounding an organelle e.g. nuclear membrane lumen. www.broad.mit.e...
Broad MEMBRANE_ENCLOSED_LUMEN View Gene Set 2.354e-21 434 9.141e-20 5 Genes annotated by the GO term GO:0031974. The enclosed volume within a sealed membrane or between two sealed membranes. www.broad.mit.e...
Broad NUCLEAR_LUMEN View Gene Set 4.198e-17 365 1.397e-15 7 Genes annotated by the GO term GO:0031981. The volume enclosed by the nuclear inner membrane. www.broad.mit.e...
Broad MACROMOLECULAR_COMPLEX View Gene Set 3.807e-13 914 1.109e-11 8 Genes annotated by the GO term GO:0032991. A stable assembly of two or more macromolecules i.e. proteins nucleic acids carbohydrates or lipids in which the constituent parts function together. www.broad.mit.e...
Broad CYTOPLASM View Gene Set 3.064e-11 2054 7.933e-10 9 Genes annotated by the GO term GO:0005737. All of the contents of a cell excluding the plasma membrane and nucleus but including other subcellular structures. www.broad.mit.e...
Broad NUCLEOLUS View Gene Set 5.321e-11 116 1.24e-09 10 Genes annotated by the GO term GO:0005730. A small dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein is not bounded by a limiting membrane and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA the processing of this RNA into 5.8S 18S and 28S components of ribosomal RNA and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome. www.broad.mit.e...
Broad NON_MEMBRANE_BOUND_ORGANELLE View Gene Set 9.142e-11 613 1.775e-09 11 Genes annotated by the GO term GO:0043228. Organized structure of distinctive morphology and function not bounded by a lipid bilayer membrane. Includes ribosomes the cytoskeleton and chromosomes. www.broad.mit.e...
Broad INTRACELLULAR_NON_MEMBRANE_BOUND_ORGANELLE View Gene Set 9.142e-11 613 1.775e-09 11 Genes annotated by the GO term GO:0043232. Organized structure of distinctive morphology and function not bounded by a lipid bilayer membrane and occurring within the cell. Includes ribosomes the cytoskeleton and chromosomes. www.broad.mit.e...
Broad RIBONUCLEOPROTEIN_COMPLEX View Gene Set 1.914e-10 129 3.431e-09 13 Genes annotated by the GO term GO:0030529. A macromolecular complex containing both protein and RNA molecules. www.broad.mit.e...
Broad NUCLEOPLASM View Gene Set 1.919e-09 266 3.193e-08 14 Genes annotated by the GO term GO:0005654. That part of the nuclear content other than the chromosomes or the nucleolus. www.broad.mit.e...
Broad CHROMOSOME View Gene Set 1.35e-08 122 2.098e-07 15 Genes annotated by the GO term GO:0005694. A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information. www.broad.mit.e...
Broad PROTEIN_COMPLEX View Gene Set 2.623e-08 799 3.82e-07 16 Genes annotated by the GO term GO:0043234. Any protein group composed of two or more subunits which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups such as nucleic acids metal ions or carbohydrate groups. www.broad.mit.e...
Broad MITOCHONDRION View Gene Set 3.189e-08 335 4.371e-07 17 Genes annotated by the GO term GO:0005739. A semiautonomous self replicating organelle that occurs in varying numbers shapes and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration. www.broad.mit.e...
Broad CYTOPLASMIC_PART View Gene Set 4.975e-08 1350 6.44e-07 18 Genes annotated by the GO term GO:0044444. Any constituent part of the cytoplasm all of the contents of a cell excluding the plasma membrane and nucleus but including other subcellular structures. www.broad.mit.e...
Broad SPINDLE View Gene Set 2.012e-07 37 2.468e-06 19 Genes annotated by the GO term GO:0005819. The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart. www.broad.mit.e...
Broad ENVELOPE View Gene Set 3.056e-07 165 3.391e-06 20 Genes annotated by the GO term GO:0031975. A multilayered structure surrounding all or part of a cell; encompasses one or more lipid bilayers and may include a cell wall layer also includes the space between layers. www.broad.mit.e...
Broad ORGANELLE_ENVELOPE View Gene Set 3.056e-07 165 3.391e-06 20 Genes annotated by the GO term GO:0031967. A double membrane structure enclosing an organelle including two lipid bilayers and the region between them. In some cases an organelle envelope may have more than two membranes. www.broad.mit.e...
Broad NUCLEOPLASM_PART View Gene Set 3.273e-07 202 3.466e-06 22 Genes annotated by the GO term GO:0044451. Any constituent part of the nucleoplasm that part of the nuclear content other than the chromosomes or the nucleolus. www.broad.mit.e...
Broad CHROMOSOMAL_PART View Gene Set 3.696e-07 95 3.744e-06 23 Genes annotated by the GO term GO:0044427. Any constituent part of a chromosome a structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information. www.broad.mit.e...
Broad MITOCHONDRIAL_PART View Gene Set 1.418e-06 140 1.377e-05 24 Genes annotated by the GO term GO:0044429. Any constituent part of a mitochondrion a semiautonomous self replicating organelle that occurs in varying numbers shapes and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration. www.broad.mit.e...
Broad NUCLEAR_MEMBRANE_PART View Gene Set 3.007e-05 40 0.0002802 25 Genes annotated by the GO term GO:0044453. Any constituent part of the nuclear membrane the envelope that surrounds the nucleus of eukaryotic cells. www.broad.mit.e...
Broad NUCLEOLAR_PART View Gene Set 3.134e-05 16 0.0002808 26 Genes annotated by the GO term GO:0044452. Any constituent part of a nucleolus a small dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein is not bounded by a limiting membrane and is not seen during mitosis. www.broad.mit.e...
Broad ORGANELLE_MEMBRANE View Gene Set 5.172e-05 290 0.0004463 27 Genes annotated by the GO term GO:0031090. The lipid bilayer surrounding an organelle. www.broad.mit.e...
Broad NUCLEAR_MEMBRANE View Gene Set 8.083e-05 48 0.0006726 28 Genes annotated by the GO term GO:0031965. Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space. www.broad.mit.e...
Broad SPLICEOSOME View Gene Set 8.657e-05 44 0.0006955 29 Genes annotated by the GO term GO:0005681. A ribonucleoprotein complex containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron. www.broad.mit.e...
Broad CHROMOSOMEPERICENTRIC_REGION View Gene Set 9.539e-05 31 0.0007409 30 Genes annotated by the GO term GO:0000775. The central region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes this region corresponds to a single area of the chromosome whereas in holocentric chromosomes it is evenly distributed along the chromosome. www.broad.mit.e...
Broad NUCLEAR_ENVELOPE View Gene Set 0.0001068 71 0.0008027 31 Genes annotated by the GO term GO:0005635. The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space a gap of width 20-40 nm (also called the perinuclear space). www.broad.mit.e...
Broad SPINDLE_POLE View Gene Set 0.0001405 17 0.001023 32 Genes annotated by the GO term GO:0000922. Either of the ends of a spindle where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules spindle microtubules and astral microtubules. www.broad.mit.e...
Broad MITOCHONDRIAL_MATRIX View Gene Set 0.0001778 46 0.001219 33 Genes annotated by the GO term GO:0005759. The gel-like material with considerable fine structure that lies in the matrix space or lumen of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and in some organisms the enzymes concerned with fatty-acid oxidation. www.broad.mit.e...
Broad MITOCHONDRIAL_LUMEN View Gene Set 0.0001778 46 0.001219 33 Genes annotated by the GO term GO:0031980. The volume enclosed by the mitochondrial inner membrane. www.broad.mit.e...
Broad ORGANELLE_INNER_MEMBRANE View Gene Set 0.0002529 74 0.001683 35 Genes annotated by the GO term GO:0019866. The inner i.e. lumen-facing lipid bilayer of an organelle envelope; usually highly selective to most ions and metabolites. www.broad.mit.e...
Broad SMALL_NUCLEAR_RIBONUCLEOPROTEIN_COMPLEX View Gene Set 0.0003512 20 0.002273 36 Genes annotated by the GO term GO:0030532. A complex composed of RNA of the small nuclear RNA (snRNA) class and protein found in the nucleus of a eukaryotic cell. These are typically named after the snRNA(s) they contain e.g. U1 snRNP or U4/U6 snRNP. Many but not all of these complexes are involved in splicing of nuclear mRNAs. www.broad.mit.e...
Broad INTEGRATOR_COMPLEX View Gene Set 0.0003618 13 0.002278 37 Genes annotated by the GO term GO:0032039. A protein complex that stably associates with the C-terminus of RNA polymerase II and mediates 3'-end processing of small nuclear RNAs generated by RNA polymerase II. www.broad.mit.e...
Broad NUCLEAR_PORE View Gene Set 0.0003973 29 0.002436 38 Genes annotated by the GO term GO:0005643. Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell where the inner and outer nuclear membranes are joined. www.broad.mit.e...
Broad MITOCHONDRIAL_MEMBRANE View Gene Set 0.0004481 85 0.002677 39 Genes annotated by the GO term GO:0031966. Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope. www.broad.mit.e...
Broad KINETOCHORE View Gene Set 0.0004652 25 0.00271 40 Genes annotated by the GO term GO:0000776. A multisubunit complex that is located at the pericentric region of DNA and provides an attachment point for the spindle microtubules. www.broad.mit.e...
Broad CONDENSED_CHROMOSOME View Gene Set 0.0005283 32 0.003002 41 Genes annotated by the GO term GO:0000793. A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure. www.broad.mit.e...
Broad MITOCHONDRIAL_ENVELOPE View Gene Set 0.0006463 95 0.003586 42 Genes annotated by the GO term GO:0005740. The double lipid bilayer enclosing the mitochondrion and separating its contents from the cell cytoplasm; includes the intermembrane space. www.broad.mit.e...
Broad MITOCHONDRIAL_INNER_MEMBRANE View Gene Set 0.0006897 66 0.003737 43 Genes annotated by the GO term GO:0005743. The inner i.e. lumen-facing lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae. www.broad.mit.e...
Broad SPINDLE_MICROTUBULE View Gene Set 0.000894 15 0.004734 44 Genes annotated by the GO term GO:0005876. Any microtubule that is part of a mitotic or meiotic spindle; anchored at one spindle pole. www.broad.mit.e...
Broad RIBOSOME View Gene Set 0.001024 39 0.005303 45 Genes annotated by the GO term GO:0005840. An intracellular organelle about 200 A in diameter consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits one large and one small each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients expressed in Svedberg units (symbol: S). Hence the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes eukaryotes mitochondria and chloroplasts have characteristically distinct ribosomal proteins. www.broad.mit.e...
Broad ENDOMEMBRANE_SYSTEM View Gene Set 0.001103 213 0.005588 46 Genes annotated by the GO term GO:0012505. A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum Golgi bodies vesicles cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles. www.broad.mit.e...
Broad ENDOPLASMIC_RETICULUM View Gene Set 0.001606 282 0.007962 47 Genes annotated by the GO term GO:0005783. The irregular network of unit membranes visible only by electron microscopy that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels which are often expanded into slitlike cavities called cisternae. The ER takes two forms rough (or granular) with ribosomes adhering to the outer surface and smooth (with no ribosomes attached). www.broad.mit.e...
Broad PORE_COMPLEX View Gene Set 0.002598 34 0.01259 48 Genes annotated by the GO term GO:0046930. Any small opening in a membrane that allows the passage of gases and/or liquids. www.broad.mit.e...
Broad TRANSCRIPTION_FACTOR_COMPLEX View Gene Set 0.002647 84 0.01259 48 Genes annotated by the GO term GO:0005667. Any complex distinct from RNA polymerase including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences and regulating transcription. www.broad.mit.e...
Broad DNA_DIRECTED_RNA_POLYMERASEII_HOLOENZYME View Gene Set 0.003338 65 0.01556 50 Genes annotated by the GO term GO:0016591. Large protein complex composed of the RNA polymerase core complex and a variety of other proteins including transcription factor complexes TFIIA D E F and H which are required for promoter recognition and the Mediator subcomplex. Catalyzes the synthesis of eukaryotic pre-mRNA. www.broad.mit.e...
Broad CHROMATIN View Gene Set 0.003555 35 0.01624 51 Genes annotated by the GO term GO:0000785. The ordered and organized complex of DNA and protein that forms the chromosome. www.broad.mit.e...
Broad NUCLEAR_CHROMOSOME View Gene Set 0.004061 53 0.0182 52 Genes annotated by the GO term GO:0000228. A chromosome found in the nucleus of a eukaryotic cell. www.broad.mit.e...
Broad MITOCHONDRIAL_MEMBRANE_PART View Gene Set 0.004487 52 0.01972 53 Genes annotated by the GO term GO:0044455. Any constituent part of the mitochondrial membrane either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope. www.broad.mit.e...
Broad ENDOPLASMIC_RETICULUM_LUMEN View Gene Set 0.006833 12 0.02949 54 Genes annotated by the GO term GO:0005788. The volume enclosed by the membranes of the endoplasmic reticulum. www.broad.mit.e...
Broad ENDOPLASMIC_RETICULUM_PART View Gene Set 0.007073 93 0.02996 55 Genes annotated by the GO term GO:0044432. Any constituent part of the endoplasmic reticulum the irregular network of unit membranes visible only by electron microscopy that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels which are often expanded into slitlike cavities called cisternae. www.broad.mit.e...
Broad ORGANELLAR_RIBOSOME View Gene Set 0.008441 22 0.0345 56 Genes annotated by the GO term GO:0000313. A ribosome contained within a subcellular organelle. www.broad.mit.e...
Broad MITOCHONDRIAL_RIBOSOME View Gene Set 0.008441 22 0.0345 56 Genes annotated by the GO term GO:0005761. A ribosome found in the mitochondrion of a eukaryotic cell; contains a characteristic set of proteins distinct from those of cytosolic ribosomes. www.broad.mit.e...
Broad MICROTUBULE_CYTOSKELETON View Gene Set 0.009628 146 0.03868 58 Genes annotated by the GO term GO:0015630. The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins. www.broad.mit.e...

Gene Set Collection: Broad.c5.MF

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad RNA_BINDING View Gene Set 1.055e-06 236 0.0004176 1 Genes annotated by the GO term GO:0003723. Interacting selectively with an RNA molecule or a portion thereof. www.broad.mit.e...
Broad METHYLTRANSFERASE_ACTIVITY View Gene Set 1.091e-05 36 0.001661 2 Genes annotated by the GO term GO:0008168. Catalysis of the transfer of a methyl group to an acceptor molecule. www.broad.mit.e...
Broad DOUBLE_STRANDED_DNA_BINDING View Gene Set 1.258e-05 32 0.001661 2 Genes annotated by the GO term GO:0003690. Interacting selectively with double-stranded DNA. www.broad.mit.e...
Broad TRANSFERASE_ACTIVITY_TRANSFERRING_ONE_CARBON_GROUPS View Gene Set 2.255e-05 37 0.001853 4 Genes annotated by the GO term GO:0016741. Catalysis of the transfer of a one-carbon group from one compound (donor) to another (acceptor). www.broad.mit.e...
Broad DNA_BINDING View Gene Set 2.339e-05 587 0.001853 4 Genes annotated by the GO term GO:0003677. Interacting selectively with DNA (deoxyribonucleic acid). www.broad.mit.e...
Broad STRUCTURE_SPECIFIC_DNA_BINDING View Gene Set 4.911e-05 55 0.003241 6 Genes annotated by the GO term GO:0043566. Interacting selectively with DNA of a specific structure or configuration e.g. triplex DNA binding or bent DNA binding. www.broad.mit.e...
Broad RNA_HELICASE_ACTIVITY View Gene Set 7.543e-05 24 0.003708 7 Genes annotated by the GO term GO:0003724. Catalysis of the unwinding of an RNA helix. www.broad.mit.e...
Broad ATP_DEPENDENT_HELICASE_ACTIVITY View Gene Set 8.568e-05 26 0.003708 7 Genes annotated by the GO term GO:0008026. Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix. www.broad.mit.e...
Broad PROTEIN_METHYLTRANSFERASE_ACTIVITY View Gene Set 9.364e-05 14 0.003708 7 Genes annotated by the GO term GO:0008276. Catalysis of the transfer of a methyl group (CH3-) to a protein. www.broad.mit.e...
Broad CHROMATIN_BINDING View Gene Set 9.253e-05 32 0.003708 7 Genes annotated by the GO term GO:0003682. Interacting selectively with chromatin the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase. www.broad.mit.e...
Broad HISTONE_METHYLTRANSFERASE_ACTIVITY View Gene Set 0.000165 11 0.005446 11 Genes annotated by the GO term GO:0042054. Catalysis of the transfer of a methyl group (CH3-) to a histone. www.broad.mit.e...
Broad HELICASE_ACTIVITY View Gene Set 0.0001606 49 0.005446 11 Genes annotated by the GO term GO:0004386. Catalysis of the unwinding of a DNA or RNA duplex. www.broad.mit.e...
Broad TRANSFERASE_ACTIVITY_TRANSFERRING_GROUPS_OTHER_THAN_AMINO_ACYL_GROUPS View Gene Set 0.0001809 47 0.00551 13 Genes annotated by the GO term GO:0016747. Catalysis of the transfer of an acyl group other than amino-acyl from one compound (donor) to another (acceptor). www.broad.mit.e...
Broad ENDONUCLEASE_ACTIVITY_GO_0016893 View Gene Set 0.0002748 11 0.007772 14 Genes annotated by the GO term GO:0016893. Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks to yield 5'-phosphomonoesters. www.broad.mit.e...
Broad NUCLEOTIDYLTRANSFERASE_ACTIVITY View Gene Set 0.0003497 47 0.009233 15 Genes annotated by the GO term GO:0016779. Catalysis of the transfer of a nucleotidyl group to a reactant. www.broad.mit.e...
Broad TRANSFERASE_ACTIVITY_TRANSFERRING_ACYL_GROUPS View Gene Set 0.0003986 56 0.009513 16 Genes annotated by the GO term GO:0016746. Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor). www.broad.mit.e...
Broad STRUCTURAL_CONSTITUENT_OF_RIBOSOME View Gene Set 0.0004084 80 0.009513 16 Genes annotated by the GO term GO:0003735. The action of a molecule that contributes to the structural integrity of the ribosome. www.broad.mit.e...
Broad S_ADENOSYLMETHIONINE_DEPENDENT_METHYLTRANSFERASE_ACTIVITY View Gene Set 0.0004472 23 0.009839 18 Genes annotated by the GO term GO:0008757. Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to a substrate. www.broad.mit.e...
Broad ATP_DEPENDENT_RNA_HELICASE_ACTIVITY View Gene Set 0.0006069 17 0.01265 19 Genes annotated by the GO term GO:0004004. Catalysis of the reaction: ATP + H2O = ADP + phosphate driving the unwinding of an RNA helix. www.broad.mit.e...
Broad HYDROLASE_ACTIVITY_ACTING_ON_ACID_ANHYDRIDES View Gene Set 0.0006723 224 0.01316 20 Genes annotated by the GO term GO:0016817. Catalysis of the hydrolysis of any acid anhydride. www.broad.mit.e...
Broad ENDONUCLEASE_ACTIVITY View Gene Set 0.0006977 25 0.01316 20 Genes annotated by the GO term GO:0004519. Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks. www.broad.mit.e...
Broad DNA_DEPENDENT_ATPASE_ACTIVITY View Gene Set 0.0007991 22 0.01438 22 Genes annotated by the GO term GO:0008094. Catalysis of the reaction: ATP + H2O = ADP + phosphate in the presence of single- or double-stranded DNA; drives another reaction. www.broad.mit.e...
Broad ENDORIBONUCLEASE_ACTIVITY View Gene Set 0.0009083 13 0.01564 23 Genes annotated by the GO term GO:0004521. Catalysis of the hydrolysis of ester linkages within ribonucleic acid by creating internal breaks. www.broad.mit.e...
Broad SINGLE_STRANDED_DNA_BINDING View Gene Set 0.0009688 34 0.01599 24 Genes annotated by the GO term GO:0003697. Interacting selectively with single-stranded DNA. www.broad.mit.e...
Broad NUCLEASE_ACTIVITY View Gene Set 0.001018 54 0.01612 25 Genes annotated by the GO term GO:0004518. Catalysis of the hydrolysis of ester linkages within nucleic acids. www.broad.mit.e...
Broad N_METHYLTRANSFERASE_ACTIVITY View Gene Set 0.001097 13 0.01672 26 Genes annotated by the GO term GO:0008170. Catalysis of the transfer of a methyl group to the nitrogen atom of an acceptor molecule. www.broad.mit.e...
Broad PYROPHOSPHATASE_ACTIVITY View Gene Set 0.001244 222 0.01825 27 Genes annotated by the GO term GO:0016462. Catalysis of the hydrolysis of a pyrophosphate bond between two phosphate groups leaving one phosphate on each of the two fragments. www.broad.mit.e...
Broad TRANSCRIPTION_FACTOR_BINDING View Gene Set 0.001366 300 0.01931 28 Genes annotated by the GO term GO:0008134. Interacting selectively with a transcription factor any protein required to initiate or regulate transcription. www.broad.mit.e...
Broad RNA_DEPENDENT_ATPASE_ACTIVITY View Gene Set 0.001668 18 0.02278 29 Genes annotated by the GO term GO:0008186. Catalysis of the reaction: ATP + H2O = ADP + phosphate in the presence of RNA; drives another reaction. www.broad.mit.e...
Broad TRANSFERASE_ACTIVITY_TRANSFERRING_PHOSPHORUS_CONTAINING_GROUPS View Gene Set 0.001736 414 0.02291 30 Genes annotated by the GO term GO:0016772. Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor). www.broad.mit.e...
Broad N_ACETYLTRANSFERASE_ACTIVITY View Gene Set 0.002701 21 0.0345 31 Genes annotated by the GO term GO:0008080. Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule. www.broad.mit.e...
Broad NUCLEOSIDE_TRIPHOSPHATASE_ACTIVITY View Gene Set 0.002999 208 0.03641 32 Genes annotated by the GO term GO:0017111. Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate. www.broad.mit.e...
Broad N_ACYLTRANSFERASE_ACTIVITY View Gene Set 0.003034 24 0.03641 32 Genes annotated by the GO term GO:0016410. Catalysis of the transfer of an acyl group to a nitrogen atom on the acceptor molecule. www.broad.mit.e...
Broad DNA_HELICASE_ACTIVITY View Gene Set 0.003434 24 0.03936 34 Genes annotated by the GO term GO:0003678. Catalysis of the unwinding of a DNA duplex. www.broad.mit.e...
Broad HISTONE_ACETYLTRANSFERASE_ACTIVITY View Gene Set 0.003479 16 0.03936 34 Genes annotated by the GO term GO:0004402. Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone. www.broad.mit.e...
Broad DRUG_BINDING View Gene Set 0.00408 15 0.04263 36 Genes annotated by the GO term GO:0008144. Interacting selectively with a drug any naturally occurring or synthetic substance other than a nutrient that when administered or applied to an organism affects the structure or functioning of the organism; in particular any such substance used in the diagnosis prevention or treatment of disease. www.broad.mit.e...
Broad RNA_POLYMERASE_ACTIVITY View Gene Set 0.004091 16 0.04263 36 Genes annotated by the GO term GO:0034062. Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1); the synthesis of RNA from ribonucleotide triphosphates in the presence of a nucleic acid template. www.broad.mit.e...
Broad ATP_DEPENDENT_DNA_HELICASE_ACTIVITY View Gene Set 0.004036 11 0.04263 36 Genes annotated by the GO term GO:0004003. Catalysis of the reaction: ATP + H2O = ADP + phosphate driving the unwinding of the DNA helix. www.broad.mit.e...
Broad TRANSLATION_INITIATION_FACTOR_ACTIVITY View Gene Set 0.004521 24 0.0459 39 Genes annotated by the GO term GO:0003743. Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide. www.broad.mit.e...

Gene Set Collection: PMID

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
PMID 15635413 View Gene Set 2.868e-38 421 7.189e-35 1 Nucleolar proteome dynamics. www.ncbi.nlm.ni...
PMID 11790298 View Gene Set 5.351e-27 208 6.708e-24 2 Directed proteomic analysis of the human nucleolus. www.ncbi.nlm.ni...
PMID 16565220 View Gene Set 3.618e-24 210 3.023e-21 3 Phosphoproteome analysis of the human mitotic spindle. www.ncbi.nlm.ni...
PMID 16964243 View Gene Set 6.426e-21 504 4.028e-18 4 A probability-based approach for high-throughput protein phosphorylation analysis and site localization. www.ncbi.nlm.ni...
PMID 12429849 View Gene Set 9.667e-19 106 4.847e-16 5 Functional proteomic analysis of human nucleolus. www.ncbi.nlm.ni...
PMID 15302935 View Gene Set 2.662e-17 773 1.112e-14 6 Large-scale characterization of HeLa cell nuclear phosphoproteins. www.ncbi.nlm.ni...
PMID 17643375 View Gene Set 2.85e-15 391 1.021e-12 7 Systematic analysis of the protein interaction network for the human transcription machinery reveals the identity of the 7SK capping enzyme. www.ncbi.nlm.ni...
PMID 11042152 View Gene Set 6.093e-15 315 1.909e-12 8 Cloning and functional analysis of cDNAs with open reading frames for 300 previously undefined genes expressed in CD34+ hematopoietic stem/progenitor cells. www.ncbi.nlm.ni...
PMID 10810093 View Gene Set 9.349e-10 151 2.604e-07 9 Identification of novel human genes evolutionarily conserved in Caenorhabditis elegans by comparative proteomics. www.ncbi.nlm.ni...
PMID 15009096 View Gene Set 5.372e-09 39 1.347e-06 10 Proteomics analysis of the centromere complex from HeLa interphase cells: UV-damaged DNA binding protein 1 (DDB-1) is a component of the CEN-complex while BMI-1 is transiently co-localized with the centromeric region in interphase. www.ncbi.nlm.ni...
PMID 12226669 View Gene Set 1.626e-08 108 3.706e-06 11 Comprehensive proteomic analysis of the human spliceosome. www.ncbi.nlm.ni...
PMID 20508983 View Gene Set 5.648e-08 102 1.18e-05 12 Centrosome-related genes genetic variation and risk of breast cancer. www.ncbi.nlm.ni...
PMID 12791985 View Gene Set 2.321e-07 37 4.476e-05 13 Sensing DNA damage through ATRIP recognition of RPA-ssDNA complexes. www.ncbi.nlm.ni...
PMID 14559993 View Gene Set 3.465e-07 51 6.204e-05 14 Regulation of alternative splicing by SRrp86 and its interacting proteins. www.ncbi.nlm.ni...
PMID 12706105 View Gene Set 4.153e-07 182 6.94e-05 15 Identification and characterization of over 100 mitochondrial ribosomal protein pseudogenes in the human genome. www.ncbi.nlm.ni...
PMID 19738611 View Gene Set 7.064e-07 39 0.0001107 16 Cell cycle genes and ovarian cancer susceptibility: a tagSNP analysis. www.ncbi.nlm.ni...
PMID 11543634 View Gene Set 9.041e-07 58 0.0001259 17 The human mitochondrial ribosomal protein genes: mapping of 54 genes to the chromosomes and implications for human disorders. www.ncbi.nlm.ni...
PMID 17148452 View Gene Set 8.795e-07 87 0.0001259 17 Characterization of the interactome of the human MutL homologues MLH1 PMS1 and PMS2. www.ncbi.nlm.ni...
PMID 20085707 View Gene Set 1.804e-06 42 0.000238 19 Aire's partners in the molecular control of immunological tolerance. www.ncbi.nlm.ni...
PMID 15324660 View Gene Set 2.092e-06 242 0.0002622 20 Proteomic functional and domain-based analysis of in vivo 14-3-3 binding proteins involved in cytoskeletal regulation and cellular organization. www.ncbi.nlm.ni...
PMID 15232106 View Gene Set 3.345e-06 30 0.0003994 21 Self-assembling protein microarrays. www.ncbi.nlm.ni...
PMID 11991638 View Gene Set 4.603e-06 74 0.0005245 22 Purification and characterization of native spliceosomes suitable for three-dimensional structural analysis. www.ncbi.nlm.ni...
PMID 14667819 View Gene Set 5.436e-06 112 0.0005925 23 Analysis of a high-throughput yeast two-hybrid system and its use to predict the function of intracellular proteins encoded within the human MHC class III region. www.ncbi.nlm.ni...
PMID 15231747 View Gene Set 6.65e-06 212 0.0006947 24 A protein interaction framework for human mRNA degradation. www.ncbi.nlm.ni...
PMID 15504738 View Gene Set 9.575e-06 19 0.0009602 25 Genes affecting the cell cycle growth maintenance and drug sensitivity are preferentially regulated by anti-HER2 antibody through phosphatidylinositol 3-kinase-AKT signaling. www.ncbi.nlm.ni...
PMID 12228227 View Gene Set 1.413e-05 30 0.001363 26 Docking of HIV-1 Vpr to the nuclear envelope is mediated by the interaction with the nucleoporin hCG1. www.ncbi.nlm.ni...
PMID 18162579 View Gene Set 1.71e-05 22 0.001563 27 Identification of novel human Cdt1-binding proteins by a proteomics approach: proteolytic regulation by APC/CCdh1. www.ncbi.nlm.ni...
PMID 19468067 View Gene Set 1.746e-05 10 0.001563 27 Mitotic control of kinetochore-associated dynein and spindle orientation by human Spindly. www.ncbi.nlm.ni...
PMID 15707391 View Gene Set 2.11e-05 23 0.001763 29 DNA-dependent phosphorylation of Chk1 and Claspin in a human cell-free system. www.ncbi.nlm.ni...
PMID 19710015 View Gene Set 2.104e-05 48 0.001763 29 The metastasis efficiency modifier ribosomal RNA processing 1 homolog B (RRP1B) is a chromatin-associated factor. www.ncbi.nlm.ni...
PMID 9472028 View Gene Set 2.238e-05 12 0.00181 31 SRPK2: a differentially expressed SR protein-specific kinase involved in mediating the interaction and localization of pre-mRNA splicing factors in mammalian cells. www.ncbi.nlm.ni...
PMID 19596235 View Gene Set 2.428e-05 85 0.001902 32 Mammalian BTBD12/SLX4 assembles a Holliday junction resolvase and is required for DNA repair. www.ncbi.nlm.ni...
PMID 17363900 View Gene Set 3.39e-05 14 0.002575 33 The human Nup107-160 nuclear pore subcomplex contributes to proper kinetochore functions. www.ncbi.nlm.ni...
PMID 16341674 View Gene Set 4.09e-05 392 0.002992 34 Transcriptome analysis of human gastric cancer. www.ncbi.nlm.ni...
PMID 16622419 View Gene Set 4.177e-05 16 0.002992 34 The human CENP-A centromeric nucleosome-associated complex. www.ncbi.nlm.ni...
PMID 11095689 View Gene Set 9.441e-05 17 0.00626 36 The human homolog of Saccharomyces cerevisiae Mcm10 interacts with replication factors and dissociates from nuclease-resistant nuclear structures in G(2) phase. www.ncbi.nlm.ni...
PMID 11742988 View Gene Set 9.458e-05 20 0.00626 36 APC/C-mediated destruction of the centrosomal kinase Nek2A occurs in early mitosis and depends upon a cyclin A-type D-box. www.ncbi.nlm.ni...
PMID 15226314 View Gene Set 9.489e-05 20 0.00626 36 Human claspin is a ring-shaped DNA-binding protein with high affinity to branched DNA structures. www.ncbi.nlm.ni...
PMID 15782174 View Gene Set 0.0001283 31 0.00825 39 Identifying and quantifying in vivo methylation sites by heavy methyl SILAC. www.ncbi.nlm.ni...
PMID 12665801 View Gene Set 0.0001316 261 0.008251 40 Exploring proteomes and analyzing protein processing by mass spectrometric identification of sorted N-terminal peptides. www.ncbi.nlm.ni...
PMID 15096576 View Gene Set 0.0001439 14 0.008801 41 Mutual interactions between subunits of the human RNase MRP ribonucleoprotein complex. www.ncbi.nlm.ni...
PMID 11799066 View Gene Set 0.0001593 21 0.009508 42 Isolating human transcription factor targets by coupling chromatin immunoprecipitation and CpG island microarray analysis. www.ncbi.nlm.ni...
PMID 12614612 View Gene Set 0.00018 19 0.01049 43 Interaction and assembly of murine pre-replicative complex proteins in yeast and mouse cells. www.ncbi.nlm.ni...
PMID 20522537 View Gene Set 0.000186 73 0.0106 44 Variation within DNA repair pathway genes and risk of multiple sclerosis. www.ncbi.nlm.ni...
PMID 10766737 View Gene Set 0.0002166 11 0.01174 45 Analysis of promoter binding by the E2F and pRB families in vivo: distinct E2F proteins mediate activation and repression. www.ncbi.nlm.ni...
PMID 17577209 View Gene Set 0.0002202 28 0.01174 45 The interactome of the histone gene regulatory factor HiNF-P suggests novel cell cycle related roles in transcriptional control and RNA processing. www.ncbi.nlm.ni...
PMID 18782753 View Gene Set 0.0002163 45 0.01174 45 A PP2A phosphatase high density interaction network identifies a novel striatin-interacting phosphatase and kinase complex linked to the cerebral cavernous malformation 3 (CCM3) protein. www.ncbi.nlm.ni...
PMID 7584028 View Gene Set 0.000229 37 0.01196 48 Prediction of the coding sequences of unidentified human genes. I. The coding sequences of 40 new genes (KIAA0001-KIAA0040) deduced by analysis of randomly sampled cDNA clones from human immature myeloid cell line KG-1 (supplement). www.ncbi.nlm.ni...
PMID 16622420 View Gene Set 0.0002457 14 0.01232 49 The CENP-H-I complex is required for the efficient incorporation of newly synthesized CENP-A into centromeres. www.ncbi.nlm.ni...
PMID 9244350 View Gene Set 0.0002415 11 0.01232 49 BRCA1 proteins are transported to the nucleus in the absence of serum and splice variants BRCA1a BRCA1b are tyrosine phosphoproteins that associate with E2F cyclins and cyclin dependent kinases. www.ncbi.nlm.ni...
PMID 11535616 View Gene Set 0.0002693 18 0.01298 51 Checkpoint inhibition of the APC/C in HeLa cells is mediated by a complex of BUBR1 BUB3 CDC20 and MAD2. www.ncbi.nlm.ni...
PMID 14593737 View Gene Set 0.0002693 18 0.01298 51 The mitotic checkpoint: a signaling pathway that allows a single unattached kinetochore to inhibit mitotic exit. www.ncbi.nlm.ni...
PMID 12045100 View Gene Set 0.0002973 18 0.01372 53 DNA replication in eukaryotic cells. www.ncbi.nlm.ni...
PMID 16083285 View Gene Set 0.0003065 59 0.01372 53 Global phosphoproteome of HT-29 human colon adenocarcinoma cells. www.ncbi.nlm.ni...
PMID 16716197 View Gene Set 0.0002925 10 0.01372 53 Comprehensive analysis of the ICEN (Interphase Centromere Complex) components enriched in the CENP-A chromatin of human cells. www.ncbi.nlm.ni...
PMID 9731529 View Gene Set 0.0003013 24 0.01372 53 Mass spectrometry and EST-database searching allows characterization of the multi-protein spliceosome complex. www.ncbi.nlm.ni...
PMID 15779907 View Gene Set 0.0003141 12 0.01382 57 Toward the full set of human mitochondrial aminoacyl-tRNA synthetases: characterization of AspRS and TyrRS. www.ncbi.nlm.ni...
PMID 7584026 View Gene Set 0.0003241 43 0.01401 58 Prediction of the coding sequences of unidentified human genes. I. The coding sequences of 40 new genes (KIAA0001-KIAA0040) deduced by analysis of randomly sampled cDNA clones from human immature myeloid cell line KG-1. www.ncbi.nlm.ni...
PMID 15592455 View Gene Set 0.00034 317 0.01445 59 Immunoaffinity profiling of tyrosine phosphorylation in cancer cells. www.ncbi.nlm.ni...
PMID 11060040 View Gene Set 0.0003509 15 0.01466 60 Human pre-mRNA cleavage factor II(m) contains homologs of yeast proteins and bridges two other cleavage factors. www.ncbi.nlm.ni...
PMID 20226869 View Gene Set 0.0003625 25 0.0149 61 Association between genetic variants in the base excision repair pathway and outcomes after hematopoietic cell transplantations. www.ncbi.nlm.ni...
PMID 10531003 View Gene Set 0.0003759 15 0.01507 62 Newly assembled snRNPs associate with coiled bodies before speckles suggesting a nuclear snRNP maturation pathway. www.ncbi.nlm.ni...
PMID 12171929 View Gene Set 0.0003788 31 0.01507 62 A proteomics approach to identify proliferating cell nuclear antigen (PCNA)-binding proteins in human cell lysates. Identification of the human CHL12/RFCs2-5 complex as a novel PCNA-binding protein. www.ncbi.nlm.ni...
PMID 10793135 View Gene Set 0.0003939 18 0.01543 64 Mitotic regulation of the APC activator proteins CDC20 and CDH1. www.ncbi.nlm.ni...
PMID 11784859 View Gene Set 0.0004082 16 0.01574 65 Role of the Sin3-histone deacetylase complex in growth regulation by the candidate tumor suppressor p33(ING1). www.ncbi.nlm.ni...
PMID 20516191 View Gene Set 0.0004808 12 0.01826 66 A rational nomenclature for serine/arginine-rich protein splicing factors (SR proteins). www.ncbi.nlm.ni...
PMID 11256614 View Gene Set 0.000567 522 0.0209 67 Systematic subcellular localization of novel proteins identified by large-scale cDNA sequencing. www.ncbi.nlm.ni...
PMID 15130578 View Gene Set 0.0005639 22 0.0209 67 Why do cells need an assembly machine for RNA-protein complexes? www.ncbi.nlm.ni...
PMID 12234937 View Gene Set 0.0005927 34 0.02153 69 Characterization of novel SF3b and 17S U2 snRNP proteins including a human Prp5p homologue and an SF3b DEAD-box protein. www.ncbi.nlm.ni...
PMID 15342556 View Gene Set 0.0006184 737 0.02215 70 Sequence comparison of human and mouse genes reveals a homologous block structure in the promoter regions. www.ncbi.nlm.ni...
PMID 15502821 View Gene Set 0.0006855 12 0.02421 71 A conserved Mis12 centromere complex is linked to heterochromatic HP1 and outer kinetochore protein Zwint-1. www.ncbi.nlm.ni...
PMID 11748230 View Gene Set 0.0007033 17 0.02449 72 Purification of native survival of motor neurons complexes and identification of Gemin6 as a novel component. www.ncbi.nlm.ni...
PMID 19064571 View Gene Set 0.0007385 75 0.02536 73 Polymorphisms in mitochondrial genes and prostate cancer risk. www.ncbi.nlm.ni...
PMID 10601273 View Gene Set 0.0007604 21 0.02576 74 Nuclear import of hepatic glucokinase depends upon glucokinase regulatory protein whereas export is due to a nuclear export signal sequence in glucokinase. www.ncbi.nlm.ni...
PMID 12070128 View Gene Set 0.000782 17 0.0258 75 Human securin proteolysis is controlled by the spindle checkpoint and reveals when the APC/C switches from activation by Cdc20 to Cdh1. www.ncbi.nlm.ni...
PMID 12963728 View Gene Set 0.0007781 21 0.0258 75 Identification of new subunits of the multiprotein mammalian TRRAP/TIP60-containing histone acetyltransferase complex. www.ncbi.nlm.ni...
PMID 10436018 View Gene Set 0.000793 15 0.02582 77 The Cdc6 nucleotide-binding site regulates its activity in DNA replication in human cells. www.ncbi.nlm.ni...
PMID 11714716 View Gene Set 0.0009251 13 0.02936 78 Gemin5 a novel WD repeat protein component of the SMN complex that binds Sm proteins. www.ncbi.nlm.ni...
PMID 17289661 View Gene Set 0.0009171 35 0.02936 78 Molecular composition of IMP1 ribonucleoprotein granules. www.ncbi.nlm.ni...
PMID 10725331 View Gene Set 0.0009381 14 0.0294 80 Gemin4. A novel component of the SMN complex that is found in both gems and nucleoli. www.ncbi.nlm.ni...
PMID 8722009 View Gene Set 0.001022 80 0.03163 81 Structure and evolution of mammalian ribosomal proteins. www.ncbi.nlm.ni...
PMID 11279123 View Gene Set 0.001209 31 0.03695 82 The small subunit of the mammalian mitochondrial ribosome. Identification of the full complement of ribosomal proteins present. www.ncbi.nlm.ni...
PMID 15146057 View Gene Set 0.001275 10 0.0385 83 The entire Nup107-160 complex including three new members is targeted as one entity to kinetochores in mitosis. www.ncbi.nlm.ni...
PMID 11076961 View Gene Set 0.001306 14 0.03898 84 Characterization of vertebrate cohesin complexes and their regulation in prophase. www.ncbi.nlm.ni...
PMID 15144186 View Gene Set 0.001329 133 0.0392 85 Robust phosphoproteomic profiling of tyrosine phosphorylation sites from human T cells using immobilized metal affinity chromatography and tandem mass spectrometry. www.ncbi.nlm.ni...
PMID 10318877 View Gene Set 0.001408 10 0.04104 86 Characterization of the DOC1/APC10 subunit of the yeast and the human anaphase-promoting complex. www.ncbi.nlm.ni...
PMID 15189156 View Gene Set 0.001542 88 0.04415 87 The molecular mechanics of eukaryotic translation. www.ncbi.nlm.ni...
PMID 17848411 View Gene Set 0.00155 13 0.04415 87 Developmental changes in human fetal testicular cell numbers and messenger ribonucleic acid levels during the second trimester. www.ncbi.nlm.ni...
PMID 15489336 View Gene Set 0.001601 722 0.04466 89 From ORFeome to biology: a functional genomics pipeline. www.ncbi.nlm.ni...
PMID 15960975 View Gene Set 0.001603 28 0.04466 89 Physical association and coordinate function of the H3 K4 methyltransferase MLL1 and the H4 K16 acetyltransferase MOF. www.ncbi.nlm.ni...
PMID 16620772 View Gene Set 0.001667 24 0.04592 91 A general approach for investigating enzymatic pathways and substrates for ubiquitin-like modifiers. www.ncbi.nlm.ni...
PMID 16307923 View Gene Set 0.001709 23 0.04658 92 Monoubiquitination of human histone H2B: the factors involved and their roles in HOX gene regulation. www.ncbi.nlm.ni...
PMID 11101529 View Gene Set 0.001733 34 0.04671 93 Functional analysis of the human CDC5L complex and identification of its components by mass spectrometry. www.ncbi.nlm.ni...
PMID 15456888 View Gene Set 0.001897 24 0.04953 94 The WW domain-containing proteins interact with the early spliceosome and participate in pre-mRNA splicing in vivo. www.ncbi.nlm.ni...
PMID 16381901 View Gene Set 0.001863 720 0.04953 94 The LIFEdb database in 2006. www.ncbi.nlm.ni...
PMID 16627869 View Gene Set 0.001885 17 0.04953 94 Quantitative proteomic analysis of post-translational modifications of human histones. www.ncbi.nlm.ni...
PMID 11931757 View Gene Set 0.001923 22 0.0497 97 Human origin recognition complex large subunit is degraded by ubiquitin-mediated proteolysis after initiation of DNA replication. www.ncbi.nlm.ni...
PMID 15146077 View Gene Set 0.001943 32 0.04971 98 The human 18S U11/U12 snRNP contains a set of novel proteins not found in the U2-dependent spliceosome. www.ncbi.nlm.ni...

Gene Set Collection: Prosite

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null PS50102 View Gene Set 3.671e-09 229 2.698e-06 1 RRM expasy.org/pros...
Null PS50082 View Gene Set 9.465e-06 233 0.002921 2 WD_REPEATS_2 expasy.org/pros...
Null PS50294 View Gene Set 1.192e-05 245 0.002921 2 WD_REPEATS_REGION expasy.org/pros...
Null PS00292 View Gene Set 2.003e-05 10 0.003681 4 CYCLINS expasy.org/pros...
Null PS00678 View Gene Set 0.0001153 168 0.01695 5 WD_REPEATS_1 expasy.org/pros...
Null PS00674 View Gene Set 0.0001492 29 0.01827 6 AAA expasy.org/pros...
Null PS50158 View Gene Set 0.0002767 31 0.02906 7 ZF_CCHC expasy.org/pros...
Null PS51195 View Gene Set 0.0005058 37 0.04647 8 Q_MOTIF expasy.org/pros...

Gene Set Collection: ppi.BIND

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null ppi.E2F4 View Gene Set 2.079e-05 14 0.00393 1 Protein-protein-interaction for E2F4 www.ncbi.nlm.ni...

Gene Set Collection: ppi.BioGRID

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null ppi.155871 View Gene Set 5.991e-19 236 1.376e-15 1 Protein-protein-interaction for 155871 www.ncbi.nlm.ni...
Null ppi.MEPCE View Gene Set 3.991e-08 147 4.583e-05 2 Protein-protein-interaction for MEPCE www.ncbi.nlm.ni...
Null ppi.SRRM2 View Gene Set 4.184e-07 101 0.0003203 3 Protein-protein-interaction for SRRM2 www.ncbi.nlm.ni...
Null ppi.SRRM1 View Gene Set 1.24e-06 64 0.0007118 4 Protein-protein-interaction for SRRM1 www.ncbi.nlm.ni...
Null ppi.72462 View Gene Set 8.943e-06 42 0.004109 5 Protein-protein-interaction for 72462 www.ncbi.nlm.ni...
Null ppi.ORC2L View Gene Set 1.282e-05 12 0.004908 6 Protein-protein-interaction for ORC2L www.ncbi.nlm.ni...
Null ppi.RUVBL2 View Gene Set 1.871e-05 64 0.005373 7 Protein-protein-interaction for RUVBL2 www.ncbi.nlm.ni...
Null ppi.UIMC1 View Gene Set 1.675e-05 30 0.005373 7 Protein-protein-interaction for UIMC1 www.ncbi.nlm.ni...
Null ppi.CDT1 View Gene Set 5.682e-05 37 0.0145 9 Protein-protein-interaction for CDT1 www.ncbi.nlm.ni...
Null ppi.CDK2 View Gene Set 7.583e-05 12 0.01716 10 Protein-protein-interaction for CDK2 www.ncbi.nlm.ni...
Null ppi.WDR48 View Gene Set 8.964e-05 52 0.01716 10 Protein-protein-interaction for WDR48 www.ncbi.nlm.ni...
Null ppi.H2AFY View Gene Set 8.933e-05 12 0.01716 10 Protein-protein-interaction for H2AFY www.ncbi.nlm.ni...
Null ppi.AURKA View Gene Set 0.0001691 9 0.02989 13 Protein-protein-interaction for AURKA www.ncbi.nlm.ni...
Null ppi.TP53 View Gene Set 0.0001877 168 0.03079 14 Protein-protein-interaction for TP53 www.ncbi.nlm.ni...
Null ppi.PSIP1 View Gene Set 0.000261 7 0.03199 15 Protein-protein-interaction for PSIP1 www.ncbi.nlm.ni...
Null ppi.WBP4 View Gene Set 0.0003063 35 0.03199 15 Protein-protein-interaction for WBP4 www.ncbi.nlm.ni...
Null ppi.KHDRBS2 View Gene Set 0.0002237 46 0.03199 15 Protein-protein-interaction for KHDRBS2 www.ncbi.nlm.ni...
Null ppi.RRP1B View Gene Set 0.0002341 21 0.03199 15 Protein-protein-interaction for RRP1B www.ncbi.nlm.ni...
Null ppi.MCM7 View Gene Set 0.0002816 11 0.03199 15 Protein-protein-interaction for MCM7 www.ncbi.nlm.ni...
Null ppi.KIAA1377 View Gene Set 0.0002383 57 0.03199 15 Protein-protein-interaction for KIAA1377 www.ncbi.nlm.ni...
Null ppi.USP36 View Gene Set 0.0003064 17 0.03199 15 Protein-protein-interaction for USP36 www.ncbi.nlm.ni...
Null ppi.TAF1D View Gene Set 0.0002956 21 0.03199 15 Protein-protein-interaction for TAF1D www.ncbi.nlm.ni...
Null ppi.SUPT16H View Gene Set 0.0003631 11 0.03626 23 Protein-protein-interaction for SUPT16H www.ncbi.nlm.ni...
Null ppi.HIST1H4A View Gene Set 0.0003844 28 0.03679 24 Protein-protein-interaction for HIST1H4A www.ncbi.nlm.ni...
Null ppi.RNPS1 View Gene Set 0.0005675 38 0.04225 25 Protein-protein-interaction for RNPS1 www.ncbi.nlm.ni...
Null ppi.NBN View Gene Set 0.0005731 13 0.04225 25 Protein-protein-interaction for NBN www.ncbi.nlm.ni...
Null ppi.ORC1L View Gene Set 0.0005969 9 0.04225 25 Protein-protein-interaction for ORC1L www.ncbi.nlm.ni...
Null ppi.LYAR View Gene Set 0.0005424 26 0.04225 25 Protein-protein-interaction for LYAR www.ncbi.nlm.ni...
Null ppi.RBL1 View Gene Set 0.0004707 24 0.04225 25 Protein-protein-interaction for RBL1 www.ncbi.nlm.ni...
Null ppi.SRPK2 View Gene Set 0.0005473 7 0.04225 25 Protein-protein-interaction for SRPK2 www.ncbi.nlm.ni...
Null ppi.TERF2 View Gene Set 0.0004981 9 0.04225 25 Protein-protein-interaction for TERF2 www.ncbi.nlm.ni...
Null ppi.WRN View Gene Set 0.0006199 14 0.04225 25 Protein-protein-interaction for WRN www.ncbi.nlm.ni...
Null ppi.MIS12 View Gene Set 0.0006254 9 0.04225 25 Protein-protein-interaction for MIS12 www.ncbi.nlm.ni...
Null ppi.LNX1 View Gene Set 0.0006137 41 0.04225 25 Protein-protein-interaction for LNX1 www.ncbi.nlm.ni...
Null ppi.FOXM1 View Gene Set 0.0006969 8 0.04574 35 Protein-protein-interaction for FOXM1 www.ncbi.nlm.ni...
Null ppi.RPA1 View Gene Set 0.0007199 23 0.04594 36 Protein-protein-interaction for RPA1 www.ncbi.nlm.ni...
Null ppi.SF3A2 View Gene Set 0.0007662 16 0.04631 37 Protein-protein-interaction for SF3A2 www.ncbi.nlm.ni...
Null ppi.CDK1 View Gene Set 0.0007613 7 0.04631 37 Protein-protein-interaction for CDK1 www.ncbi.nlm.ni...
Null ppi.PUF60 View Gene Set 0.0008858 31 0.04916 39 Protein-protein-interaction for PUF60 www.ncbi.nlm.ni...
Null ppi.MRE11A View Gene Set 0.0008989 13 0.04916 39 Protein-protein-interaction for MRE11A www.ncbi.nlm.ni...
Null ppi.SUMO2 View Gene Set 0.0008955 50 0.04916 39 Protein-protein-interaction for SUMO2 www.ncbi.nlm.ni...
Null ppi.MCM8 View Gene Set 0.0008397 6 0.04916 39 Protein-protein-interaction for MCM8 www.ncbi.nlm.ni...
Null ppi.CDKN1A View Gene Set 0.0009226 14 0.04917 43 Protein-protein-interaction for CDKN1A www.ncbi.nlm.ni...
Null ppi.NIF3L1 View Gene Set 0.0009418 25 0.04917 43 Protein-protein-interaction for NIF3L1 www.ncbi.nlm.ni...

Gene Set Collection: ppi.HPRD

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null ppi.SFRS12 View Gene Set 1.449e-06 49 0.00344 1 Protein-protein-interaction for SFRS12 www.ncbi.nlm.ni...

Gene Set Collection: ppi.anyDB

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null ppi.155871 View Gene Set 7.613e-19 251 2.736e-15 1 Protein-protein-interaction for 155871 www.ncbi.nlm.ni...
Null ppi.MEPCE View Gene Set 3.991e-08 147 7.172e-05 2 Protein-protein-interaction for MEPCE www.ncbi.nlm.ni...
Null ppi.SRRM2 View Gene Set 4.184e-07 101 0.0005012 3 Protein-protein-interaction for SRRM2 www.ncbi.nlm.ni...
Null ppi.SRRM1 View Gene Set 7.388e-07 66 0.0006638 4 Protein-protein-interaction for SRRM1 www.ncbi.nlm.ni...
Null ppi.SFRS12 View Gene Set 9.484e-07 50 0.0006817 5 Protein-protein-interaction for SFRS12 www.ncbi.nlm.ni...
Null ppi.CDT1 View Gene Set 4.211e-06 42 0.002522 6 Protein-protein-interaction for CDT1 www.ncbi.nlm.ni...
Null ppi.72462 View Gene Set 8.943e-06 42 0.004592 7 Protein-protein-interaction for 72462 www.ncbi.nlm.ni...
Null ppi.E2F4 View Gene Set 1.559e-05 16 0.007004 8 Protein-protein-interaction for E2F4 www.ncbi.nlm.ni...
Null ppi.ORC2L View Gene Set 2.366e-05 15 0.009447 9 Protein-protein-interaction for ORC2L www.ncbi.nlm.ni...
Null ppi.UIMC1 View Gene Set 3.082e-05 32 0.01108 10 Protein-protein-interaction for UIMC1 www.ncbi.nlm.ni...
Null ppi.SUPT16H View Gene Set 5.973e-05 15 0.01707 11 Protein-protein-interaction for SUPT16H www.ncbi.nlm.ni...
Null ppi.ORC4L View Gene Set 6.117e-05 10 0.01707 11 Protein-protein-interaction for ORC4L www.ncbi.nlm.ni...
Null ppi.RBL1 View Gene Set 6.226e-05 31 0.01707 11 Protein-protein-interaction for RBL1 www.ncbi.nlm.ni...
Null ppi.CDC20 View Gene Set 6.648e-05 5 0.01707 11 Protein-protein-interaction for CDC20 www.ncbi.nlm.ni...
Null ppi.RBL2 View Gene Set 8.148e-05 30 0.0183 15 Protein-protein-interaction for RBL2 www.ncbi.nlm.ni...
Null ppi.WRN View Gene Set 7.923e-05 21 0.0183 15 Protein-protein-interaction for WRN www.ncbi.nlm.ni...
Null ppi.WDR48 View Gene Set 8.964e-05 52 0.01895 17 Protein-protein-interaction for WDR48 www.ncbi.nlm.ni...
Null ppi.H2AFY View Gene Set 0.0001174 13 0.02345 18 Protein-protein-interaction for H2AFY www.ncbi.nlm.ni...
Null ppi.PUF60 View Gene Set 0.000132 35 0.02497 19 Protein-protein-interaction for PUF60 www.ncbi.nlm.ni...
Null ppi.ORC1L View Gene Set 0.0001406 11 0.02526 20 Protein-protein-interaction for ORC1L www.ncbi.nlm.ni...
Null ppi.RUVBL2 View Gene Set 0.0001658 72 0.0262 21 Protein-protein-interaction for RUVBL2 www.ncbi.nlm.ni...
Null ppi.KHDRBS2 View Gene Set 0.0001601 48 0.0262 21 Protein-protein-interaction for KHDRBS2 www.ncbi.nlm.ni...
Null ppi.FOXM1 View Gene Set 0.0001677 9 0.0262 21 Protein-protein-interaction for FOXM1 www.ncbi.nlm.ni...
Null ppi.ORC3L View Gene Set 0.0001812 16 0.02714 24 Protein-protein-interaction for ORC3L www.ncbi.nlm.ni...
Null ppi.TP53 View Gene Set 0.0001993 220 0.02866 25 Protein-protein-interaction for TP53 www.ncbi.nlm.ni...
Null ppi.ORC5L View Gene Set 0.0002118 11 0.02927 26 Protein-protein-interaction for ORC5L www.ncbi.nlm.ni...
Null ppi.RRP1B View Gene Set 0.0002341 21 0.03117 27 Protein-protein-interaction for RRP1B www.ncbi.nlm.ni...
Null ppi.NBN View Gene Set 0.0002428 16 0.03117 27 Protein-protein-interaction for NBN www.ncbi.nlm.ni...
Null ppi.CDKN1A View Gene Set 0.0002902 20 0.03148 29 Protein-protein-interaction for CDKN1A www.ncbi.nlm.ni...
Null ppi.WBP4 View Gene Set 0.0003063 35 0.03148 29 Protein-protein-interaction for WBP4 www.ncbi.nlm.ni...
Null ppi.PBK View Gene Set 0.0002708 13 0.03148 29 Protein-protein-interaction for PBK www.ncbi.nlm.ni...
Null ppi.USP36 View Gene Set 0.0003064 17 0.03148 29 Protein-protein-interaction for USP36 www.ncbi.nlm.ni...
Null ppi.TAF1D View Gene Set 0.0002956 21 0.03148 29 Protein-protein-interaction for TAF1D www.ncbi.nlm.ni...
Null ppi.LNX1 View Gene Set 0.0003066 43 0.03148 29 Protein-protein-interaction for LNX1 www.ncbi.nlm.ni...
Null ppi.DNAJA3 View Gene Set 0.000261 16 0.03148 29 Protein-protein-interaction for DNAJA3 www.ncbi.nlm.ni...
Null ppi.KIAA1377 View Gene Set 0.0003181 64 0.03175 36 Protein-protein-interaction for KIAA1377 www.ncbi.nlm.ni...
Null ppi.NEK6 View Gene Set 0.0004372 16 0.04034 37 Protein-protein-interaction for NEK6 www.ncbi.nlm.ni...
Null ppi.MRE11A View Gene Set 0.0004332 16 0.04034 37 Protein-protein-interaction for MRE11A www.ncbi.nlm.ni...
Null ppi.RPA1 View Gene Set 0.0004377 24 0.04034 37 Protein-protein-interaction for RPA1 www.ncbi.nlm.ni...
Null ppi.ANAPC2 View Gene Set 0.0004669 8 0.04195 40 Protein-protein-interaction for ANAPC2 www.ncbi.nlm.ni...
Null ppi.PSIP1 View Gene Set 0.0004952 10 0.04341 41 Protein-protein-interaction for PSIP1 www.ncbi.nlm.ni...
Null ppi.LYAR View Gene Set 0.0005424 26 0.04575 42 Protein-protein-interaction for LYAR www.ncbi.nlm.ni...
Null ppi.SRPK2 View Gene Set 0.0005473 7 0.04575 42 Protein-protein-interaction for SRPK2 www.ncbi.nlm.ni...
Null ppi.DBF4 View Gene Set 0.0006052 12 0.04944 44 Protein-protein-interaction for DBF4 www.ncbi.nlm.ni...
Null ppi.MIS12 View Gene Set 0.0006254 9 0.04995 45 Protein-protein-interaction for MIS12 www.ncbi.nlm.ni...
Null ppi.LSM2 View Gene Set 0.0006415 26 0.04998 46 Protein-protein-interaction for LSM2 www.ncbi.nlm.ni...
Null ppi.SSRP1 View Gene Set 0.0006536 21 0.04998 46 Protein-protein-interaction for SSRP1 www.ncbi.nlm.ni...

Gene Set Collection: pathwayCommons.cell-map

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null TGFBR View Gene Set 0.000788 124 0.00788 1 CELL_MAP - TGFBR gene set www.pathwaycomm...
Null AndrogenReceptor View Gene Set 0.004526 78 0.02263 2 CELL_MAP - AndrogenReceptor gene set www.pathwaycomm...

Gene Set Collection: pathwayCommons.nci-nature

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null Aurora B signaling View Gene Set 6.433e-11 41 1.196e-08 1 NCI_NATURE - Aurora B signaling gene set www.pathwaycomm...
Null Polo-like kinase signaling events in the cell cycle View Gene Set 5.487e-06 109 0.0002628 2 NCI_NATURE - Polo-like kinase signaling events in the cell cycle gene set www.pathwaycomm...
Null FOXM1 transcription factor network View Gene Set 5.651e-06 42 0.0002628 2 NCI_NATURE - FOXM1 transcription factor network gene set www.pathwaycomm...
Null Signaling by Aurora kinases View Gene Set 4.971e-06 98 0.0002628 2 NCI_NATURE - Signaling by Aurora kinases gene set www.pathwaycomm...
Null Validated targets of C-MYC transcriptional activation View Gene Set 1.464e-05 80 0.0005055 5 NCI_NATURE - Validated targets of C-MYC transcriptional activation gene set www.pathwaycomm...
Null PLK1 signaling events View Gene Set 1.631e-05 104 0.0005055 5 NCI_NATURE - PLK1 signaling events gene set www.pathwaycomm...
Null Coregulation of Androgen receptor activity View Gene Set 3.81e-05 61 0.001012 7 NCI_NATURE - Coregulation of Androgen receptor activity gene set www.pathwaycomm...
Null Regulation of Androgen receptor activity View Gene Set 0.0001263 108 0.002936 8 NCI_NATURE - Regulation of Androgen receptor activity gene set www.pathwaycomm...
Null C-MYC pathway View Gene Set 0.0001962 149 0.004055 9 NCI_NATURE - C-MYC pathway gene set www.pathwaycomm...
Null Androgen-mediated signaling View Gene Set 0.0002677 130 0.004979 10 NCI_NATURE - Androgen-mediated signaling gene set www.pathwaycomm...
Null E2F transcription factor network View Gene Set 0.002543 73 0.043 11 NCI_NATURE - E2F transcription factor network gene set www.pathwaycomm...
Null Regulation of Telomerase View Gene Set 0.00298 68 0.04618 12 NCI_NATURE - Regulation of Telomerase gene set www.pathwaycomm...
Null BARD1 signaling events View Gene Set 0.003349 29 0.04791 13 NCI_NATURE - BARD1 signaling events gene set www.pathwaycomm...

Gene Set Collection: pathwayCommons.reactome

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null Cell Cycle Mitotic View Gene Set 3.666e-22 312 4.095e-19 1 REACTOME - Cell Cycle Mitotic gene set www.pathwaycomm... Mitotic&format=...
Null Gene Expression View Gene Set 8.636e-19 381 4.823e-16 2 REACTOME - Gene Expression gene set www.pathwaycomm...
Null M Phase View Gene Set 3.782e-18 90 1.408e-15 3 REACTOME - M Phase gene set www.pathwaycomm...
Null Mitotic Prometaphase View Gene Set 4.583e-17 86 1.024e-14 4 REACTOME - Mitotic Prometaphase gene set www.pathwaycomm...
Null Mitotic M-M/G1 phases View Gene Set 4.178e-17 180 1.024e-14 4 REACTOME - Mitotic M-M/G1 phases gene set www.pathwaycomm...
Null DNA Replication View Gene Set 1.195e-16 200 2.225e-14 6 REACTOME - DNA Replication gene set www.pathwaycomm...
Null Processing of Capped Intron-Containing Pre-mRNA View Gene Set 1.667e-12 138 2.661e-10 7 REACTOME - Processing of Capped Intron-Containing Pre-mRNA gene set www.pathwaycomm...
Null Formation and Maturation of mRNA Transcript View Gene Set 6.011e-12 185 8.393e-10 8 REACTOME - Formation and Maturation of mRNA Transcript gene set www.pathwaycomm...
Null mRNA Processing View Gene Set 8.796e-12 158 1.092e-09 9 REACTOME - mRNA Processing gene set www.pathwaycomm...
Null Metabolism of RNA View Gene Set 1.721e-09 174 1.923e-07 10 REACTOME - Metabolism of RNA gene set www.pathwaycomm...
Null Metabolism of proteins View Gene Set 6.259e-09 263 6.356e-07 11 REACTOME - Metabolism of proteins gene set www.pathwaycomm...
Null mRNA Splicing - Major Pathway View Gene Set 1.852e-08 107 1.591e-06 12 REACTOME - mRNA Splicing - Major Pathway gene set www.pathwaycomm...
Null mRNA Splicing View Gene Set 1.852e-08 107 1.591e-06 12 REACTOME - mRNA Splicing gene set www.pathwaycomm...
Null Transport of Mature mRNA derived from an Intron-Containing Transcript View Gene Set 3.313e-08 51 2.644e-06 14 REACTOME - Transport of Mature mRNA derived from an Intron-Containing Transcript gene set www.pathwaycomm...
Null Transport of Mature Transcript to Cytoplasm View Gene Set 4.476e-08 55 3.333e-06 15 REACTOME - Transport of Mature Transcript to Cytoplasm gene set www.pathwaycomm...
Null G2/M Checkpoints View Gene Set 6.915e-08 43 4.828e-06 16 REACTOME - G2/M Checkpoints gene set www.pathwaycomm...
Null snRNP Assembly View Gene Set 9.73e-08 50 6.038e-06 17 REACTOME - snRNP Assembly gene set www.pathwaycomm...
Null Metabolism of non-coding RNA View Gene Set 9.73e-08 50 6.038e-06 17 REACTOME - Metabolism of non-coding RNA gene set www.pathwaycomm...
Null Activation of ATR in response to replication stress View Gene Set 2.321e-07 37 1.365e-05 19 REACTOME - Activation of ATR in response to replication stress gene set www.pathwaycomm...
Null Influenza Life Cycle View Gene Set 2.954e-07 138 1.65e-05 20 REACTOME - Influenza Life Cycle gene set www.pathwaycomm...
Null Influenza Infection View Gene Set 5.686e-07 143 3.025e-05 21 REACTOME - Influenza Infection gene set www.pathwaycomm...
Null Cell Cycle Checkpoints View Gene Set 6.231e-07 124 3.163e-05 22 REACTOME - Cell Cycle Checkpoints gene set www.pathwaycomm...
Null Interactions of Rev with host cellular proteins View Gene Set 8.246e-07 33 4.005e-05 23 REACTOME - Interactions of Rev with host cellular proteins gene set www.pathwaycomm...
Null Rev-mediated nuclear export of HIV-1 RNA View Gene Set 8.935e-07 32 4.158e-05 24 REACTOME - Rev-mediated nuclear export of HIV-1 RNA gene set www.pathwaycomm...
Null Transcription View Gene Set 1.039e-06 178 4.643e-05 25 REACTOME - Transcription gene set www.pathwaycomm...
Null Transport of the SLBP Dependant Mature mRNA View Gene Set 2.352e-06 33 0.0001011 26 REACTOME - Transport of the SLBP Dependant Mature mRNA gene set www.pathwaycomm...
Null Transport of the SLBP independent Mature mRNA View Gene Set 2.944e-06 32 0.0001175 27 REACTOME - Transport of the SLBP independent Mature mRNA gene set www.pathwaycomm...
Null HIV Life Cycle View Gene Set 2.892e-06 103 0.0001175 27 REACTOME - HIV Life Cycle gene set www.pathwaycomm...
Null Nuclear import of Rev protein View Gene Set 3.488e-06 30 0.0001343 29 REACTOME - Nuclear import of Rev protein gene set www.pathwaycomm...
Null Transport of Mature mRNAs Derived from Intronless Transcripts View Gene Set 4.268e-06 36 0.0001589 30 REACTOME - Transport of Mature mRNAs Derived from Intronless Transcripts gene set www.pathwaycomm...
Null Late Phase of HIV Life Cycle View Gene Set 4.729e-06 92 0.0001704 31 REACTOME - Late Phase of HIV Life Cycle gene set www.pathwaycomm...
Null Transport of Mature mRNA Derived from an Intronless Transcript View Gene Set 5.377e-06 35 0.0001877 32 REACTOME - Transport of Mature mRNA Derived from an Intronless Transcript gene set www.pathwaycomm...
Null HIV Infection View Gene Set 5.78e-06 194 0.0001957 33 REACTOME - HIV Infection gene set www.pathwaycomm...
Null G2/M DNA damage checkpoint View Gene Set 6.326e-06 29 0.0002078 34 REACTOME - G2/M DNA damage checkpoint gene set www.pathwaycomm...
Null Export of Viral Ribonucleoproteins from Nucleus View Gene Set 6.623e-06 31 0.0002114 35 REACTOME - Export of Viral Ribonucleoproteins from Nucleus gene set www.pathwaycomm...
Null Mitotic G1-G1/S phases View Gene Set 9.037e-06 113 0.0002804 36 REACTOME - Mitotic G1-G1/S phases gene set www.pathwaycomm...
Null NEP/NS2 Interacts with the Cellular Export Machinery View Gene Set 1.028e-05 29 0.0003104 37 REACTOME - NEP/NS2 Interacts with the Cellular Export Machinery gene set www.pathwaycomm...
Null Translation View Gene Set 1.198e-05 120 0.000352 38 REACTOME - Translation gene set www.pathwaycomm...
Null Vpr-mediated nuclear import of PICs View Gene Set 1.665e-05 31 0.000477 39 REACTOME - Vpr-mediated nuclear import of PICs gene set www.pathwaycomm...
Null Deadenylation-dependent mRNA decay View Gene Set 1.751e-05 46 0.0004889 40 REACTOME - Deadenylation-dependent mRNA decay gene set www.pathwaycomm...
Null Interactions of Vpr with host cellular proteins View Gene Set 2.081e-05 34 0.0005458 41 REACTOME - Interactions of Vpr with host cellular proteins gene set www.pathwaycomm...
Null Cap-dependent Translation Initiation View Gene Set 2.101e-05 113 0.0005458 41 REACTOME - Cap-dependent Translation Initiation gene set www.pathwaycomm...
Null Eukaryotic Translation Initiation View Gene Set 2.101e-05 113 0.0005458 41 REACTOME - Eukaryotic Translation Initiation gene set www.pathwaycomm...
Null RNA Polymerase II Transcription View Gene Set 2.208e-05 101 0.0005606 44 REACTOME - RNA Polymerase II Transcription gene set www.pathwaycomm...
Null Phosphorylation of the APC/C View Gene Set 2.329e-05 26 0.000578 45 REACTOME - Phosphorylation of the APC/C gene set www.pathwaycomm...
Null Transport of Ribonucleoproteins into the Host Nucleus View Gene Set 2.612e-05 29 0.0006342 46 REACTOME - Transport of Ribonucleoproteins into the Host Nucleus gene set www.pathwaycomm...
Null Post-Elongation Processing of the Transcript View Gene Set 3.2e-05 43 0.0007149 47 REACTOME - Post-Elongation Processing of the Transcript gene set www.pathwaycomm...
Null Host Interactions of HIV factors View Gene Set 3.081e-05 132 0.0007149 47 REACTOME - Host Interactions of HIV factors gene set www.pathwaycomm...
Null Cleavage of Growing Transcript in the Termination Region View Gene Set 3.2e-05 43 0.0007149 47 REACTOME - Cleavage of Growing Transcript in the Termination Region gene set www.pathwaycomm...
Null RNA Polymerase II Transcription Termination View Gene Set 3.2e-05 43 0.0007149 47 REACTOME - RNA Polymerase II Transcription Termination gene set www.pathwaycomm...
Null Chromosome Maintenance View Gene Set 4.059e-05 69 0.000889 51 REACTOME - Chromosome Maintenance gene set www.pathwaycomm...
Null Post-Elongation Processing of Intron-Containing pre-mRNA View Gene Set 5.031e-05 34 0.00106 52 REACTOME - Post-Elongation Processing of Intron-Containing pre-mRNA gene set www.pathwaycomm...
Null mRNA 3'-end processing View Gene Set 5.031e-05 34 0.00106 52 REACTOME - mRNA 3'-end processing gene set www.pathwaycomm...
Null E2F mediated regulation of DNA replication View Gene Set 5.715e-05 28 0.001182 54 REACTOME - E2F mediated regulation of DNA replication gene set www.pathwaycomm...
Null Insulin Synthesis and Processing View Gene Set 6.831e-05 132 0.001387 55 REACTOME - Insulin Synthesis and Processing gene set www.pathwaycomm...
Null Respiratory electron transport ATP synthesis by chemiosmotic coupling and heat production by uncoupling proteins. View Gene Set 6.96e-05 91 0.001388 56 REACTOME - Respiratory electron transport ATP synthesis by chemiosmotic coupling and heat production by uncoupling proteins. gene set www.pathwaycomm... ATP synthesis b... and heat produc...
Null 3' -UTR-mediated translational regulation View Gene Set 8.305e-05 105 0.001599 57 REACTOME - 3' -UTR-mediated translational regulation gene set www.pathwaycomm...
Null L13a-mediated translational silencing of Ceruloplasmin expression View Gene Set 8.305e-05 105 0.001599 57 REACTOME - L13a-mediated translational silencing of Ceruloplasmin expression gene set www.pathwaycomm...
Null Mitochondrial tRNA aminoacylation View Gene Set 9.586e-05 21 0.001815 59 REACTOME - Mitochondrial tRNA aminoacylation gene set www.pathwaycomm...
Null GTP hydrolysis and joining of the 60S ribosomal subunit View Gene Set 0.0001052 106 0.001946 60 REACTOME - GTP hydrolysis and joining of the 60S ribosomal subunit gene set www.pathwaycomm...
Null Asparagine N-linked glycosylation View Gene Set 0.0001063 77 0.001946 60 REACTOME - Asparagine N-linked glycosylation gene set www.pathwaycomm...
Null Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide LLO) and transfer to a nascent protein View Gene Set 0.0001128 30 0.002032 62 REACTOME - Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide LLO) and transfer to a nascent protein gene set www.pathwaycomm... LLO) and transf...
Null Cyclin B2 mediated events View Gene Set 0.0001165 5 0.002065 63 REACTOME - Cyclin B2 mediated events gene set www.pathwaycomm...
Null Mitotic G2-G2/M phases View Gene Set 0.0001308 98 0.002283 64 REACTOME - Mitotic G2-G2/M phases gene set www.pathwaycomm...
Null Mitotic Spindle Checkpoint View Gene Set 0.0001678 19 0.002883 65 REACTOME - Mitotic Spindle Checkpoint gene set www.pathwaycomm...
Null Metabolism of mRNA View Gene Set 0.0001809 125 0.003061 66 REACTOME - Metabolism of mRNA gene set www.pathwaycomm...
Null G1/S Transition View Gene Set 0.0002162 104 0.003605 67 REACTOME - G1/S Transition gene set www.pathwaycomm...
Null Recruitment of NuMA to mitotic centrosomes View Gene Set 0.0002303 14 0.003783 68 REACTOME - Recruitment of NuMA to mitotic centrosomes gene set www.pathwaycomm...
Null Activation of the pre-replicative complex View Gene Set 0.0002349 30 0.003803 69 REACTOME - Activation of the pre-replicative complex gene set www.pathwaycomm...
Null Activation of APC/C and APC/C:Cdc20 mediated degradation of mitotic proteins View Gene Set 0.0002393 86 0.003818 70 REACTOME - Activation of APC/C and APC/C:Cdc20 mediated degradation of mitotic proteins gene set www.pathwaycomm...
Null tRNA Aminoacylation View Gene Set 0.0002482 42 0.003888 71 REACTOME - tRNA Aminoacylation gene set www.pathwaycomm...
Null G2/M Transition View Gene Set 0.0002506 96 0.003888 71 REACTOME - G2/M Transition gene set www.pathwaycomm...
Null Regulation of mitotic cell cycle View Gene Set 0.0002683 95 0.003958 73 REACTOME - Regulation of mitotic cell cycle gene set www.pathwaycomm...
Null APC/C-mediated degradation of cell cycle proteins View Gene Set 0.0002683 95 0.003958 73 REACTOME - APC/C-mediated degradation of cell cycle proteins gene set www.pathwaycomm...
Null Inhibition of the proteolytic activity of APC/C required for the onset of anaphase by mitotic spindle checkpoint components View Gene Set 0.0002693 18 0.003958 73 REACTOME - Inhibition of the proteolytic activity of APC/C required for the onset of anaphase by mitotic spindle checkpoint components gene set www.pathwaycomm...
Null Inactivation of APC/C via direct inhibition of the APC/C complex View Gene Set 0.0002693 18 0.003958 73 REACTOME - Inactivation of APC/C via direct inhibition of the APC/C complex gene set www.pathwaycomm...
Null Unwinding of DNA View Gene Set 0.0002805 11 0.004069 77 REACTOME - Unwinding of DNA gene set www.pathwaycomm...
Null Regulation of Glucokinase by Glucokinase Regulatory Protein View Gene Set 0.000297 29 0.004254 78 REACTOME - Regulation of Glucokinase by Glucokinase Regulatory Protein gene set www.pathwaycomm...
Null APC/C:Cdc20 mediated degradation of Cyclin B View Gene Set 0.0003184 22 0.004445 79 REACTOME - APC/C:Cdc20 mediated degradation of Cyclin B gene set www.pathwaycomm...
Null APC-Cdc20 mediated degradation of Nek2A View Gene Set 0.0003159 23 0.004445 79 REACTOME - APC-Cdc20 mediated degradation of Nek2A gene set www.pathwaycomm...
Null Kinesins View Gene Set 0.0003624 22 0.004998 81 REACTOME - Kinesins gene set www.pathwaycomm...
Null Synthesis Secretion and Inactivation of Glucose-dependent Insulinotropic Polypeptide (GIP) View Gene Set 0.0004341 107 0.005914 82 REACTOME - Synthesis Secretion and Inactivation of Glucose-dependent Insulinotropic Polypeptide (GIP) gene set www.pathwaycomm... Secretion... and Inactivatio...
Null Cholesterol biosynthesis View Gene Set 0.0004539 20 0.006109 83 REACTOME - Cholesterol biosynthesis gene set www.pathwaycomm...
Null Phosphorylation of Emi1 View Gene Set 0.0004669 12 0.006208 84 REACTOME - Phosphorylation of Emi1 gene set www.pathwaycomm...
Null ER to Golgi Transport View Gene Set 0.0004807 9 0.006244 85 REACTOME - ER to Golgi Transport gene set www.pathwaycomm...
Null COPII (Coat Protein 2) Mediated Vesicle Transport View Gene Set 0.0004807 9 0.006244 85 REACTOME - COPII (Coat Protein 2) Mediated Vesicle Transport gene set www.pathwaycomm...
Null Respiratory electron transport View Gene Set 0.0005422 76 0.006962 87 REACTOME - Respiratory electron transport gene set www.pathwaycomm...
Null Formation of a pool of free 40S subunits View Gene Set 0.0005787 95 0.007346 88 REACTOME - Formation of a pool of free 40S subunits gene set www.pathwaycomm...
Null Regulation of APC/C activators between G1/S and early anaphase View Gene Set 0.0006178 88 0.007754 89 REACTOME - Regulation of APC/C activators between G1/S and early anaphase gene set www.pathwaycomm...
Null Diabetes pathways View Gene Set 0.000636 320 0.007894 90 REACTOME - Diabetes pathways gene set www.pathwaycomm...
Null Deposition of New CENPA-containing Nucleosomes at the Centromere View Gene Set 0.0006684 35 0.008115 91 REACTOME - Deposition of New CENPA-containing Nucleosomes at the Centromere gene set www.pathwaycomm...
Null Nucleosome assembly View Gene Set 0.0006684 35 0.008115 91 REACTOME - Nucleosome assembly gene set www.pathwaycomm...
Null Eukaryotic Translation Termination View Gene Set 0.0007262 85 0.008722 93 REACTOME - Eukaryotic Translation Termination gene set www.pathwaycomm...
Null Vitamin B5 (pantothenate) metabolism View Gene Set 0.0007431 9 0.00883 94 REACTOME - Vitamin B5 (pantothenate) metabolism gene set www.pathwaycomm...
Null Influenza Viral RNA Transcription and Replication View Gene Set 0.0007677 101 0.009026 95 REACTOME - Influenza Viral RNA Transcription and Replication gene set www.pathwaycomm...
Null Post-translational protein modification View Gene Set 0.0007762 114 0.009031 96 REACTOME - Post-translational protein modification gene set www.pathwaycomm...
Null DNA Replication Pre-Initiation View Gene Set 0.0008395 90 0.009569 97 REACTOME - DNA Replication Pre-Initiation gene set www.pathwaycomm...
Null M/G1 Transition View Gene Set 0.0008395 90 0.009569 97 REACTOME - M/G1 Transition gene set www.pathwaycomm...
Null Synthesis Secretion and Deacylation of Ghrelin View Gene Set 0.0008505 109 0.009596 99 REACTOME - Synthesis Secretion and Deacylation of Ghrelin gene set www.pathwaycomm... Secretion... and Deacylation...
Null S Phase View Gene Set 0.0008977 113 0.01003 100 REACTOME - S Phase gene set www.pathwaycomm...
Null DNA strand elongation View Gene Set 0.0009387 31 0.01038 101 REACTOME - DNA strand elongation gene set www.pathwaycomm...
Null G1/S-Specific Transcription View Gene Set 0.001012 16 0.01108 102 REACTOME - G1/S-Specific Transcription gene set www.pathwaycomm...
Null E2F-enabled inhibition of pre-replication complex formation View Gene Set 0.00114 10 0.01237 103 REACTOME - E2F-enabled inhibition of pre-replication complex formation gene set www.pathwaycomm...
Null Activation of the mRNA upon binding of the cap-binding complex and eIFs and subsequent binding to 43S View Gene Set 0.001219 57 0.01309 104 REACTOME - Activation of the mRNA upon binding of the cap-binding complex and eIFs and subsequent binding to 43S gene set www.pathwaycomm... and subsequent ...
Null Viral mRNA Translation View Gene Set 0.001247 85 0.01327 105 REACTOME - Viral mRNA Translation gene set www.pathwaycomm...
Null DNA Repair View Gene Set 0.001259 108 0.01327 106 REACTOME - DNA Repair gene set www.pathwaycomm...
Null Peptide chain elongation View Gene Set 0.001302 85 0.01359 107 REACTOME - Peptide chain elongation gene set www.pathwaycomm...
Null Translation initiation complex formation View Gene Set 0.00137 56 0.01417 108 REACTOME - Translation initiation complex formation gene set www.pathwaycomm...
Null Eukaryotic Translation Elongation View Gene Set 0.001542 88 0.0158 109 REACTOME - Eukaryotic Translation Elongation gene set www.pathwaycomm...
Null APC/C:Cdc20 mediated degradation of mitotic proteins View Gene Set 0.001605 77 0.0163 110 REACTOME - APC/C:Cdc20 mediated degradation of mitotic proteins gene set www.pathwaycomm...
Null RNA Polymerase III Transcription Initiation From Type 1 Promoter View Gene Set 0.001733 21 0.01744 111 REACTOME - RNA Polymerase III Transcription Initiation From Type 1 Promoter gene set www.pathwaycomm...
Null Synthesis Secretion and Inactivation of Glucagon-like Peptide-1 (GLP-1) View Gene Set 0.001861 112 0.01856 112 REACTOME - Synthesis Secretion and Inactivation of Glucagon-like Peptide-1 (GLP-1) gene set www.pathwaycomm... Secretion... and Inactivatio...
Null Pyrimidine biosynthesis View Gene Set 0.001886 6 0.01864 113 REACTOME - Pyrimidine biosynthesis gene set www.pathwaycomm...
Null Synthesis of substrates in N-glycan biosythesis View Gene Set 0.00194 16 0.01901 114 REACTOME - Synthesis of substrates in N-glycan biosythesis gene set www.pathwaycomm...
Null CDC6 association with the ORC:origin complex View Gene Set 0.001995 11 0.01921 115 REACTOME - CDC6 association with the ORC:origin complex gene set www.pathwaycomm...
Null Incretin Synthesis Secretion and Inactivation View Gene Set 0.001989 115 0.01921 115 REACTOME - Incretin Synthesis Secretion and Inactivation gene set www.pathwaycomm... Secretion... and Inactivatio...
Null Ribosomal scanning and start codon recognition View Gene Set 0.002129 56 0.02016 117 REACTOME - Ribosomal scanning and start codon recognition gene set www.pathwaycomm...
Null Cyclin A/B1 associated events during G2/M transition View Gene Set 0.002122 19 0.02016 117 REACTOME - Cyclin A/B1 associated events during G2/M transition gene set www.pathwaycomm...
Null Purine metabolism View Gene Set 0.002169 24 0.02036 119 REACTOME - Purine metabolism gene set www.pathwaycomm...
Null Mitotic Telophase /Cytokinesis View Gene Set 0.002291 10 0.02132 120 REACTOME - Mitotic Telophase /Cytokinesis gene set www.pathwaycomm...
Null Metabolism of nucleotides View Gene Set 0.002404 66 0.02219 121 REACTOME - Metabolism of nucleotides gene set www.pathwaycomm...
Null Hexose transport View Gene Set 0.002433 40 0.02227 122 REACTOME - Hexose transport gene set www.pathwaycomm...
Null Deadenylation of mRNA View Gene Set 0.002545 22 0.02311 123 REACTOME - Deadenylation of mRNA gene set www.pathwaycomm...
Null RNA Polymerase I RNA Polymerase III and Mitochondrial Transcription View Gene Set 0.002572 93 0.02317 124 REACTOME - RNA Polymerase I RNA Polymerase III and Mitochondrial Transcription gene set www.pathwaycomm... RNA Polymerase ... and Mitochondri...
Null Glucose transport View Gene Set 0.002768 38 0.02474 125 REACTOME - Glucose transport gene set www.pathwaycomm...
Null Phosphorylation of proteins involved in the G2/M transition by Cyclin A:Cdc2 complexes View Gene Set 0.00281 3 0.02491 126 REACTOME - Phosphorylation of proteins involved in the G2/M transition by Cyclin A:Cdc2 complexes gene set www.pathwaycomm...
Null RNA Polymerase I Promoter Escape View Gene Set 0.002973 21 0.02615 127 REACTOME - RNA Polymerase I Promoter Escape gene set www.pathwaycomm...
Null Conversion from APC/C:Cdc20 to APC/C:Cdh1 in late anaphase View Gene Set 0.003078 16 0.02686 128 REACTOME - Conversion from APC/C:Cdc20 to APC/C:Cdh1 in late anaphase gene set www.pathwaycomm...
Null APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1 View Gene Set 0.003268 77 0.0283 129 REACTOME - APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1 gene set www.pathwaycomm...
Null mRNA Splicing - Minor Pathway View Gene Set 0.00356 42 0.03012 130 REACTOME - mRNA Splicing - Minor Pathway gene set www.pathwaycomm...
Null Cyclin D associated events in G1 View Gene Set 0.003557 19 0.03012 130 REACTOME - Cyclin D associated events in G1 gene set www.pathwaycomm...
Null G1 Phase View Gene Set 0.003557 19 0.03012 130 REACTOME - G1 Phase gene set www.pathwaycomm...
Null Telomere Extension By Telomerase View Gene Set 0.003944 6 0.03313 133 REACTOME - Telomere Extension By Telomerase gene set www.pathwaycomm...
Null Integration of energy metabolism View Gene Set 0.004029 176 0.03359 134 REACTOME - Integration of energy metabolism gene set www.pathwaycomm...
Null Cooperation of Prefoldin and TriC/CCT in actin and tubulin folding View Gene Set 0.004117 15 0.03406 135 REACTOME - Cooperation of Prefoldin and TriC/CCT in actin and tubulin folding gene set www.pathwaycomm...
Null Assembly of the pre-replicative complex View Gene Set 0.004195 75 0.03445 136 REACTOME - Assembly of the pre-replicative complex gene set www.pathwaycomm...
Null RNA Polymerase III Transcription Initiation From Type 2 Promoter View Gene Set 0.004237 20 0.03455 137 REACTOME - RNA Polymerase III Transcription Initiation From Type 2 Promoter gene set www.pathwaycomm...
Null Recruitment of mitotic centrosome proteins and complexes View Gene Set 0.004392 72 0.0353 138 REACTOME - Recruitment of mitotic centrosome proteins and complexes gene set www.pathwaycomm...
Null Synthesis of DNA View Gene Set 0.004387 102 0.0353 138 REACTOME - Synthesis of DNA gene set www.pathwaycomm...
Null Formation of the ternary complex and subsequently the 43S complex View Gene Set 0.004863 49 0.0388 140 REACTOME - Formation of the ternary complex and subsequently the 43S complex gene set www.pathwaycomm... and subsequentl... the 43S complex...
Null RNA Polymerase I Transcription Initiation View Gene Set 0.00495 25 0.03894 141 REACTOME - RNA Polymerase I Transcription Initiation gene set www.pathwaycomm...
Null Cdc20:Phospho-APC/C mediated degradation of Cyclin A View Gene Set 0.00495 75 0.03894 141 REACTOME - Cdc20:Phospho-APC/C mediated degradation of Cyclin A gene set www.pathwaycomm...
Null Recycling of eIF2:GDP View Gene Set 0.00558 8 0.04329 143 REACTOME - Recycling of eIF2:GDP gene set www.pathwaycomm...
Null Centrosome maturation View Gene Set 0.005542 73 0.04329 143 REACTOME - Centrosome maturation gene set www.pathwaycomm...
Null IRS-mediated signalling View Gene Set 0.00578 51 0.04453 145 REACTOME - IRS-mediated signalling gene set www.pathwaycomm...
Null Prefoldin mediated transfer of substrate to CCT/TriC View Gene Set 0.005867 14 0.04489 146 REACTOME - Prefoldin mediated transfer of substrate to CCT/TriC gene set www.pathwaycomm...
Null Post-Elongation Processing of Intronless pre-mRNA View Gene Set 0.00641 23 0.04837 147 REACTOME - Post-Elongation Processing of Intronless pre-mRNA gene set www.pathwaycomm...
Null Processing of Capped Intronless Pre-mRNA View Gene Set 0.00641 23 0.04837 147 REACTOME - Processing of Capped Intronless Pre-mRNA gene set www.pathwaycomm...

Gene Set Collection: miranda.targets

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null hsa-miR-590-3p View Gene Set 5.394e-30 3575 3.652e-27 1 microRNA targets for hsa-miR-590-3p from miranda.targets www.mirbase.org...
Null hsa-miR-548c-3p View Gene Set 3.457e-20 3130 1.17e-17 2 microRNA targets for hsa-miR-548c-3p from miranda.targets www.mirbase.org...
Null hsa-miR-548l View Gene Set 2.813e-18 2599 6.347e-16 3 microRNA targets for hsa-miR-548l from miranda.targets www.mirbase.org...
Null hsa-miR-548e View Gene Set 5.188e-18 2325 8.78e-16 4 microRNA targets for hsa-miR-548e from miranda.targets www.mirbase.org...
Null hsa-miR-548b-5p View Gene Set 1.702e-17 3175 2.305e-15 5 microRNA targets for hsa-miR-548b-5p from miranda.targets www.mirbase.org...
Null hsa-miR-548n View Gene Set 2.427e-17 3830 2.739e-15 6 microRNA targets for hsa-miR-548n from miranda.targets www.mirbase.org...
Null hsa-miR-548a-3p View Gene Set 5.702e-17 2420 4.971e-15 7 microRNA targets for hsa-miR-548a-3p from miranda.targets www.mirbase.org...
Null hsa-miR-548d-5p View Gene Set 5.874e-17 3270 4.971e-15 7 microRNA targets for hsa-miR-548d-5p from miranda.targets www.mirbase.org...
Null hsa-miR-548a-5p View Gene Set 2.046e-16 2983 1.539e-14 9 microRNA targets for hsa-miR-548a-5p from miranda.targets www.mirbase.org...
Null hsa-miR-561 View Gene Set 4.966e-16 2925 3.362e-14 10 microRNA targets for hsa-miR-561 from miranda.targets www.mirbase.org...
Null hsa-miR-548j View Gene Set 1.226e-15 2652 7.546e-14 11 microRNA targets for hsa-miR-548j from miranda.targets www.mirbase.org...
Null hsa-miR-548f View Gene Set 1.481e-15 2082 8.353e-14 12 microRNA targets for hsa-miR-548f from miranda.targets www.mirbase.org...
Null hsa-miR-1323 View Gene Set 2.091e-15 2071 1.089e-13 13 microRNA targets for hsa-miR-1323 from miranda.targets www.mirbase.org...
Null hsa-miR-577 View Gene Set 3.62e-15 2745 1.702e-13 14 microRNA targets for hsa-miR-577 from miranda.targets www.mirbase.org...
Null hsa-miR-607 View Gene Set 3.771e-15 2322 1.702e-13 14 microRNA targets for hsa-miR-607 from miranda.targets www.mirbase.org...
Null hsa-miR-548c-5p View Gene Set 7.375e-15 2909 3.12e-13 16 microRNA targets for hsa-miR-548c-5p from miranda.targets www.mirbase.org...
Null hsa-miR-548d-3p View Gene Set 8.802e-15 2210 3.505e-13 17 microRNA targets for hsa-miR-548d-3p from miranda.targets www.mirbase.org...
Null hsa-miR-429 View Gene Set 1.904e-14 1921 7.16e-13 18 microRNA targets for hsa-miR-429 from miranda.targets www.mirbase.org...
Null hsa-miR-548i View Gene Set 1.067e-13 2860 3.803e-12 19 microRNA targets for hsa-miR-548i from miranda.targets www.mirbase.org...
Null hsa-miR-548h View Gene Set 1.15e-13 2539 3.892e-12 20 microRNA targets for hsa-miR-548h from miranda.targets www.mirbase.org...
Null hsa-miR-559 View Gene Set 1.471e-13 2900 4.741e-12 21 microRNA targets for hsa-miR-559 from miranda.targets www.mirbase.org...
Null hsa-miR-548o View Gene Set 1.727e-13 2216 5.314e-12 22 microRNA targets for hsa-miR-548o from miranda.targets www.mirbase.org...
Null hsa-miR-513a-3p View Gene Set 2.252e-13 2711 6.629e-12 23 microRNA targets for hsa-miR-513a-3p from miranda.targets www.mirbase.org...
Null hsa-miR-142-5p View Gene Set 2.802e-13 2312 7.904e-12 24 microRNA targets for hsa-miR-142-5p from miranda.targets www.mirbase.org...
Null hsa-miR-338-5p View Gene Set 3.132e-13 1707 8.482e-12 25 microRNA targets for hsa-miR-338-5p from miranda.targets www.mirbase.org...
Null hsa-miR-200c View Gene Set 4.217e-13 1794 1.098e-11 26 microRNA targets for hsa-miR-200c from miranda.targets www.mirbase.org...
Null hsa-miR-200b View Gene Set 4.776e-13 1789 1.198e-11 27 microRNA targets for hsa-miR-200b from miranda.targets www.mirbase.org...
Null hsa-miR-580 View Gene Set 1.275e-12 2207 3.082e-11 28 microRNA targets for hsa-miR-580 from miranda.targets www.mirbase.org...
Null hsa-miR-374a View Gene Set 1.696e-12 1933 3.96e-11 29 microRNA targets for hsa-miR-374a from miranda.targets www.mirbase.org...
Null hsa-miR-495 View Gene Set 6.203e-12 1793 1.4e-10 30 microRNA targets for hsa-miR-495 from miranda.targets www.mirbase.org...
Null hsa-miR-186 View Gene Set 7.581e-12 2681 1.656e-10 31 microRNA targets for hsa-miR-186 from miranda.targets www.mirbase.org...
Null hsa-miR-548p View Gene Set 9.74e-12 2743 2.061e-10 32 microRNA targets for hsa-miR-548p from miranda.targets www.mirbase.org...
Null hsa-miR-548g View Gene Set 1.647e-11 2114 3.38e-10 33 microRNA targets for hsa-miR-548g from miranda.targets www.mirbase.org...
Null hsa-miR-568 View Gene Set 3.312e-11 2065 6.594e-10 34 microRNA targets for hsa-miR-568 from miranda.targets www.mirbase.org...
Null hsa-miR-524-5p View Gene Set 3.783e-11 2574 7.316e-10 35 microRNA targets for hsa-miR-524-5p from miranda.targets www.mirbase.org...
Null hsa-miR-1244 View Gene Set 9.933e-11 2675 1.86e-09 36 microRNA targets for hsa-miR-1244 from miranda.targets www.mirbase.org...
Null hsa-miR-586 View Gene Set 1.017e-10 2421 1.86e-09 36 microRNA targets for hsa-miR-586 from miranda.targets www.mirbase.org...
Null hsa-miR-374b View Gene Set 1.189e-10 1802 2.118e-09 38 microRNA targets for hsa-miR-374b from miranda.targets www.mirbase.org...
Null hsa-miR-369-3p View Gene Set 1.227e-10 1454 2.129e-09 39 microRNA targets for hsa-miR-369-3p from miranda.targets www.mirbase.org...
Null hsa-miR-1252 View Gene Set 1.415e-10 3125 2.395e-09 40 microRNA targets for hsa-miR-1252 from miranda.targets www.mirbase.org...
Null hsa-miR-944 View Gene Set 1.574e-10 2438 2.598e-09 41 microRNA targets for hsa-miR-944 from miranda.targets www.mirbase.org...
Null hsa-miR-570 View Gene Set 1.74e-10 3124 2.804e-09 42 microRNA targets for hsa-miR-570 from miranda.targets www.mirbase.org...
Null hsa-miR-410 View Gene Set 1.809e-10 1101 2.848e-09 43 microRNA targets for hsa-miR-410 from miranda.targets www.mirbase.org...
Null hsa-miR-1283 View Gene Set 1.96e-10 1960 3.015e-09 44 microRNA targets for hsa-miR-1283 from miranda.targets www.mirbase.org...
Null hsa-miR-582-5p View Gene Set 2.025e-10 1971 3.046e-09 45 microRNA targets for hsa-miR-582-5p from miranda.targets www.mirbase.org...
Null hsa-miR-548m View Gene Set 8.451e-10 2295 1.244e-08 46 microRNA targets for hsa-miR-548m from miranda.targets www.mirbase.org...
Null hsa-miR-181d View Gene Set 1.336e-09 2212 1.925e-08 47 microRNA targets for hsa-miR-181d from miranda.targets www.mirbase.org...
Null hsa-miR-522 View Gene Set 2.092e-09 1877 2.927e-08 48 microRNA targets for hsa-miR-522 from miranda.targets www.mirbase.org...
Null hsa-miR-548k View Gene Set 2.119e-09 1874 2.927e-08 48 microRNA targets for hsa-miR-548k from miranda.targets www.mirbase.org...
Null hsa-miR-664 View Gene Set 2.273e-09 2111 3.077e-08 50 microRNA targets for hsa-miR-664 from miranda.targets www.mirbase.org...
Null hsa-miR-144 View Gene Set 3.046e-09 1767 4.043e-08 51 microRNA targets for hsa-miR-144 from miranda.targets www.mirbase.org...
Null hsa-miR-340 View Gene Set 3.682e-09 2504 4.794e-08 52 microRNA targets for hsa-miR-340 from miranda.targets www.mirbase.org...
Null hsa-miR-656 View Gene Set 3.803e-09 1774 4.858e-08 53 microRNA targets for hsa-miR-656 from miranda.targets www.mirbase.org...
Null hsa-miR-181b View Gene Set 3.972e-09 2118 4.979e-08 54 microRNA targets for hsa-miR-181b from miranda.targets www.mirbase.org...
Null hsa-miR-223 View Gene Set 4.325e-09 1344 5.324e-08 55 microRNA targets for hsa-miR-223 from miranda.targets www.mirbase.org...
Null hsa-miR-141 View Gene Set 4.537e-09 1773 5.484e-08 56 microRNA targets for hsa-miR-141 from miranda.targets www.mirbase.org...
Null hsa-miR-203 View Gene Set 6.632e-09 2295 7.877e-08 57 microRNA targets for hsa-miR-203 from miranda.targets www.mirbase.org...
Null hsa-miR-1305 View Gene Set 1.369e-08 1619 1.597e-07 58 microRNA targets for hsa-miR-1305 from miranda.targets www.mirbase.org...
Null hsa-miR-380 View Gene Set 1.592e-08 1449 1.827e-07 59 microRNA targets for hsa-miR-380 from miranda.targets www.mirbase.org...
Null hsa-miR-655 View Gene Set 1.884e-08 1858 2.126e-07 60 microRNA targets for hsa-miR-655 from miranda.targets www.mirbase.org...
Null hsa-miR-1259 View Gene Set 1.953e-08 1309 2.168e-07 61 microRNA targets for hsa-miR-1259 from miranda.targets www.mirbase.org...
Null hsa-miR-582-3p View Gene Set 4.53e-08 1217 4.946e-07 62 microRNA targets for hsa-miR-582-3p from miranda.targets www.mirbase.org...
Null hsa-miR-302c View Gene Set 4.666e-08 2046 5.014e-07 63 microRNA targets for hsa-miR-302c from miranda.targets www.mirbase.org...
Null hsa-miR-539 View Gene Set 5.57e-08 2308 5.892e-07 64 microRNA targets for hsa-miR-539 from miranda.targets www.mirbase.org...
Null hsa-miR-181c View Gene Set 5.936e-08 1844 6.182e-07 65 microRNA targets for hsa-miR-181c from miranda.targets www.mirbase.org...
Null hsa-miR-515-5p View Gene Set 6.557e-08 1821 6.726e-07 66 microRNA targets for hsa-miR-515-5p from miranda.targets www.mirbase.org...
Null hsa-miR-181a View Gene Set 6.789e-08 1946 6.86e-07 67 microRNA targets for hsa-miR-181a from miranda.targets www.mirbase.org...
Null hsa-miR-590-5p View Gene Set 7.525e-08 1206 7.492e-07 68 microRNA targets for hsa-miR-590-5p from miranda.targets www.mirbase.org...
Null hsa-miR-452 View Gene Set 1.126e-07 1919 1.089e-06 69 microRNA targets for hsa-miR-452 from miranda.targets www.mirbase.org...
Null hsa-miR-802 View Gene Set 1.119e-07 1859 1.089e-06 69 microRNA targets for hsa-miR-802 from miranda.targets www.mirbase.org...
Null hsa-miR-194 View Gene Set 1.152e-07 1144 1.099e-06 71 microRNA targets for hsa-miR-194 from miranda.targets www.mirbase.org...
Null hsa-miR-1272 View Gene Set 1.43e-07 1955 1.332e-06 72 microRNA targets for hsa-miR-1272 from miranda.targets www.mirbase.org...
Null hsa-miR-376c View Gene Set 1.436e-07 1429 1.332e-06 72 microRNA targets for hsa-miR-376c from miranda.targets www.mirbase.org...
Null hsa-miR-302b View Gene Set 1.64e-07 2091 1.496e-06 74 microRNA targets for hsa-miR-302b from miranda.targets www.mirbase.org...
Null hsa-miR-520d-5p View Gene Set 1.657e-07 2061 1.496e-06 74 microRNA targets for hsa-miR-520d-5p from miranda.targets www.mirbase.org...
Null hsa-miR-26b View Gene Set 1.947e-07 1511 1.734e-06 76 microRNA targets for hsa-miR-26b from miranda.targets www.mirbase.org...
Null hsa-miR-335 View Gene Set 1.998e-07 1631 1.734e-06 76 microRNA targets for hsa-miR-335 from miranda.targets www.mirbase.org...
Null hsa-miR-485-3p View Gene Set 1.998e-07 1229 1.734e-06 76 microRNA targets for hsa-miR-485-3p from miranda.targets www.mirbase.org...
Null hsa-miR-26a View Gene Set 2.302e-07 1414 1.924e-06 79 microRNA targets for hsa-miR-26a from miranda.targets www.mirbase.org...
Null hsa-miR-383 View Gene Set 2.302e-07 1319 1.924e-06 79 microRNA targets for hsa-miR-383 from miranda.targets www.mirbase.org...
Null hsa-miR-768-3p View Gene Set 2.269e-07 2025 1.924e-06 79 microRNA targets for hsa-miR-768-3p from miranda.targets www.mirbase.org...
Null hsa-miR-21 View Gene Set 2.498e-07 1053 2.034e-06 82 microRNA targets for hsa-miR-21 from miranda.targets www.mirbase.org...
Null hsa-miR-300 View Gene Set 2.524e-07 1644 2.034e-06 82 microRNA targets for hsa-miR-300 from miranda.targets www.mirbase.org...
Null hsa-miR-641 View Gene Set 2.474e-07 2384 2.034e-06 82 microRNA targets for hsa-miR-641 from miranda.targets www.mirbase.org...
Null hsa-miR-653 View Gene Set 2.584e-07 1411 2.058e-06 85 microRNA targets for hsa-miR-653 from miranda.targets www.mirbase.org...
Null hsa-miR-454 View Gene Set 3.011e-07 1949 2.37e-06 86 microRNA targets for hsa-miR-454 from miranda.targets www.mirbase.org...
Null hsa-miR-30e View Gene Set 3.489e-07 1792 2.715e-06 87 microRNA targets for hsa-miR-30e from miranda.targets www.mirbase.org...
Null hsa-miR-217 View Gene Set 3.868e-07 1316 2.976e-06 88 microRNA targets for hsa-miR-217 from miranda.targets www.mirbase.org...
Null hsa-miR-491-3p View Gene Set 4.12e-07 1136 3.134e-06 89 microRNA targets for hsa-miR-491-3p from miranda.targets www.mirbase.org...
Null hsa-miR-487a View Gene Set 4.791e-07 865 3.604e-06 90 microRNA targets for hsa-miR-487a from miranda.targets www.mirbase.org...
Null hsa-miR-603 View Gene Set 5.01e-07 1431 3.727e-06 91 microRNA targets for hsa-miR-603 from miranda.targets www.mirbase.org...
Null hsa-miR-190 View Gene Set 5.467e-07 1773 4.023e-06 92 microRNA targets for hsa-miR-190 from miranda.targets www.mirbase.org...
Null hsa-miR-23a View Gene Set 6.553e-07 1861 4.72e-06 93 microRNA targets for hsa-miR-23a from miranda.targets www.mirbase.org...
Null hsa-miR-888 View Gene Set 6.522e-07 1379 4.72e-06 93 microRNA targets for hsa-miR-888 from miranda.targets www.mirbase.org...
Null hsa-miR-556-3p View Gene Set 7.569e-07 822 5.287e-06 95 microRNA targets for hsa-miR-556-3p from miranda.targets www.mirbase.org...
Null hsa-miR-579 View Gene Set 7.612e-07 1840 5.287e-06 95 microRNA targets for hsa-miR-579 from miranda.targets www.mirbase.org...
Null hsa-miR-628-3p View Gene Set 7.653e-07 932 5.287e-06 95 microRNA targets for hsa-miR-628-3p from miranda.targets www.mirbase.org...
Null hsa-miR-889 View Gene Set 7.637e-07 873 5.287e-06 95 microRNA targets for hsa-miR-889 from miranda.targets www.mirbase.org...
Null hsa-miR-606 View Gene Set 9.197e-07 1040 6.289e-06 99 microRNA targets for hsa-miR-606 from miranda.targets www.mirbase.org...
Null hsa-miR-320c View Gene Set 1.108e-06 1860 7.499e-06 100 microRNA targets for hsa-miR-320c from miranda.targets www.mirbase.org...
Null hsa-miR-200a View Gene Set 1.315e-06 1619 8.813e-06 101 microRNA targets for hsa-miR-200a from miranda.targets www.mirbase.org...
Null hsa-miR-520g View Gene Set 1.518e-06 2140 1.008e-05 102 microRNA targets for hsa-miR-520g from miranda.targets www.mirbase.org...
Null hsa-miR-545 View Gene Set 1.694e-06 2246 1.113e-05 103 microRNA targets for hsa-miR-545 from miranda.targets www.mirbase.org...
Null hsa-miR-23b View Gene Set 1.954e-06 1858 1.272e-05 104 microRNA targets for hsa-miR-23b from miranda.targets www.mirbase.org...
Null hsa-miR-105 View Gene Set 2.68e-06 1644 1.712e-05 105 microRNA targets for hsa-miR-105 from miranda.targets www.mirbase.org...
Null hsa-miR-494 View Gene Set 2.675e-06 1886 1.712e-05 105 microRNA targets for hsa-miR-494 from miranda.targets www.mirbase.org...
Null hsa-miR-382 View Gene Set 3.3e-06 1641 2.088e-05 107 microRNA targets for hsa-miR-382 from miranda.targets www.mirbase.org...
Null hsa-miR-1264 View Gene Set 3.782e-06 2008 2.37e-05 108 microRNA targets for hsa-miR-1264 from miranda.targets www.mirbase.org...
Null hsa-miR-30b View Gene Set 3.892e-06 1695 2.405e-05 109 microRNA targets for hsa-miR-30b from miranda.targets www.mirbase.org...
Null hsa-miR-448 View Gene Set 3.908e-06 1660 2.405e-05 109 microRNA targets for hsa-miR-448 from miranda.targets www.mirbase.org...
Null hsa-miR-450b-5p View Gene Set 4.178e-06 2243 2.548e-05 111 microRNA targets for hsa-miR-450b-5p from miranda.targets www.mirbase.org...
Null hsa-miR-519c-3p View Gene Set 4.783e-06 2011 2.891e-05 112 microRNA targets for hsa-miR-519c-3p from miranda.targets www.mirbase.org...
Null hsa-miR-1276 View Gene Set 4.909e-06 1352 2.924e-05 113 microRNA targets for hsa-miR-1276 from miranda.targets www.mirbase.org...
Null hsa-miR-381 View Gene Set 4.924e-06 1638 2.924e-05 113 microRNA targets for hsa-miR-381 from miranda.targets www.mirbase.org...
Null hsa-miR-573 View Gene Set 5.406e-06 2023 3.182e-05 115 microRNA targets for hsa-miR-573 from miranda.targets www.mirbase.org...
Null hsa-miR-302d View Gene Set 5.776e-06 2056 3.371e-05 116 microRNA targets for hsa-miR-302d from miranda.targets www.mirbase.org...
Null hsa-miR-875-3p View Gene Set 6.744e-06 2002 3.902e-05 117 microRNA targets for hsa-miR-875-3p from miranda.targets www.mirbase.org...
Null hsa-miR-301a View Gene Set 7.258e-06 2114 4.164e-05 118 microRNA targets for hsa-miR-301a from miranda.targets www.mirbase.org...
Null hsa-miR-630 View Gene Set 7.509e-06 1318 4.272e-05 119 microRNA targets for hsa-miR-630 from miranda.targets www.mirbase.org...
Null hsa-miR-1297 View Gene Set 7.65e-06 1019 4.316e-05 120 microRNA targets for hsa-miR-1297 from miranda.targets www.mirbase.org...
Null hsa-miR-30d View Gene Set 7.742e-06 1500 4.332e-05 121 microRNA targets for hsa-miR-30d from miranda.targets www.mirbase.org...
Null hsa-miR-367 View Gene Set 7.941e-06 1270 4.407e-05 122 microRNA targets for hsa-miR-367 from miranda.targets www.mirbase.org...
Null hsa-miR-320a View Gene Set 8.366e-06 2080 4.568e-05 123 microRNA targets for hsa-miR-320a from miranda.targets www.mirbase.org...
Null hsa-miR-320b View Gene Set 8.366e-06 2080 4.568e-05 123 microRNA targets for hsa-miR-320b from miranda.targets www.mirbase.org...
Null hsa-miR-633 View Gene Set 9.048e-06 1452 4.9e-05 125 microRNA targets for hsa-miR-633 from miranda.targets www.mirbase.org...
Null hsa-miR-155 View Gene Set 9.203e-06 1331 4.945e-05 126 microRNA targets for hsa-miR-155 from miranda.targets www.mirbase.org...
Null hsa-miR-576-5p View Gene Set 9.34e-06 1494 4.979e-05 127 microRNA targets for hsa-miR-576-5p from miranda.targets www.mirbase.org...
Null hsa-miR-20a View Gene Set 9.871e-06 2324 5.221e-05 128 microRNA targets for hsa-miR-20a from miranda.targets www.mirbase.org...
Null hsa-miR-130a View Gene Set 1.091e-05 1687 5.725e-05 129 microRNA targets for hsa-miR-130a from miranda.targets www.mirbase.org...
Null hsa-miR-32 View Gene Set 1.134e-05 1319 5.895e-05 130 microRNA targets for hsa-miR-32 from miranda.targets www.mirbase.org...
Null hsa-miR-320d View Gene Set 1.141e-05 1719 5.895e-05 130 microRNA targets for hsa-miR-320d from miranda.targets www.mirbase.org...
Null hsa-miR-1261 View Gene Set 1.161e-05 979 5.909e-05 132 microRNA targets for hsa-miR-1261 from miranda.targets www.mirbase.org...
Null hsa-miR-499-5p View Gene Set 1.158e-05 1309 5.909e-05 132 microRNA targets for hsa-miR-499-5p from miranda.targets www.mirbase.org...
Null hsa-miR-20b View Gene Set 1.247e-05 2122 6.299e-05 134 microRNA targets for hsa-miR-20b from miranda.targets www.mirbase.org...
Null hsa-miR-1243 View Gene Set 1.283e-05 1196 6.434e-05 135 microRNA targets for hsa-miR-1243 from miranda.targets www.mirbase.org...
Null hsa-miR-361-5p View Gene Set 1.393e-05 1236 6.936e-05 136 microRNA targets for hsa-miR-361-5p from miranda.targets www.mirbase.org...
Null hsa-miR-651 View Gene Set 1.411e-05 1234 6.974e-05 137 microRNA targets for hsa-miR-651 from miranda.targets www.mirbase.org...
Null hsa-miR-130b View Gene Set 1.444e-05 1682 7.085e-05 138 microRNA targets for hsa-miR-130b from miranda.targets www.mirbase.org...
Null hsa-miR-106a View Gene Set 1.499e-05 2173 7.25e-05 139 microRNA targets for hsa-miR-106a from miranda.targets www.mirbase.org...
Null hsa-miR-17 View Gene Set 1.499e-05 2173 7.25e-05 139 microRNA targets for hsa-miR-17 from miranda.targets www.mirbase.org...
Null hsa-miR-409-3p View Gene Set 1.514e-05 1282 7.27e-05 141 microRNA targets for hsa-miR-409-3p from miranda.targets www.mirbase.org...
Null hsa-miR-376a View Gene Set 1.634e-05 1199 7.791e-05 142 microRNA targets for hsa-miR-376a from miranda.targets www.mirbase.org...
Null hsa-miR-496 View Gene Set 1.67e-05 1044 7.908e-05 143 microRNA targets for hsa-miR-496 from miranda.targets www.mirbase.org...
Null hsa-miR-1284 View Gene Set 1.893e-05 1108 8.9e-05 144 microRNA targets for hsa-miR-1284 from miranda.targets www.mirbase.org...
Null hsa-miR-1826 View Gene Set 2.119e-05 1313 9.895e-05 145 microRNA targets for hsa-miR-1826 from miranda.targets www.mirbase.org...
Null hsa-miR-513c View Gene Set 2.29e-05 1451 0.0001062 146 microRNA targets for hsa-miR-513c from miranda.targets www.mirbase.org...
Null hsa-miR-500 View Gene Set 2.398e-05 1378 0.0001105 147 microRNA targets for hsa-miR-500 from miranda.targets www.mirbase.org...
Null hsa-miR-190b View Gene Set 2.664e-05 1281 0.0001218 148 microRNA targets for hsa-miR-190b from miranda.targets www.mirbase.org...
Null hsa-miR-624 View Gene Set 2.962e-05 1486 0.0001346 149 microRNA targets for hsa-miR-624 from miranda.targets www.mirbase.org...
Null hsa-miR-146b-5p View Gene Set 3.041e-05 1330 0.0001372 150 microRNA targets for hsa-miR-146b-5p from miranda.targets www.mirbase.org...
Null hsa-miR-544 View Gene Set 3.089e-05 2072 0.0001385 151 microRNA targets for hsa-miR-544 from miranda.targets www.mirbase.org...
Null hsa-miR-219-2-3p View Gene Set 3.218e-05 1131 0.0001433 152 microRNA targets for hsa-miR-219-2-3p from miranda.targets www.mirbase.org...
Null hsa-miR-569 View Gene Set 3.293e-05 1013 0.0001457 153 microRNA targets for hsa-miR-569 from miranda.targets www.mirbase.org...
Null hsa-miR-376b View Gene Set 3.336e-05 1357 0.0001467 154 microRNA targets for hsa-miR-376b from miranda.targets www.mirbase.org...
Null hsa-miR-323-3p View Gene Set 3.362e-05 937 0.0001468 155 microRNA targets for hsa-miR-323-3p from miranda.targets www.mirbase.org...
Null hsa-miR-1 View Gene Set 3.507e-05 1772 0.0001522 156 microRNA targets for hsa-miR-1 from miranda.targets www.mirbase.org...
Null hsa-miR-302a View Gene Set 4.09e-05 2054 0.0001764 157 microRNA targets for hsa-miR-302a from miranda.targets www.mirbase.org...
Null hsa-miR-129-5p View Gene Set 4.359e-05 1724 0.0001868 158 microRNA targets for hsa-miR-129-5p from miranda.targets www.mirbase.org...
Null hsa-miR-549 View Gene Set 4.426e-05 875 0.0001884 159 microRNA targets for hsa-miR-549 from miranda.targets www.mirbase.org...
Null hsa-miR-137 View Gene Set 4.575e-05 1442 0.0001936 160 microRNA targets for hsa-miR-137 from miranda.targets www.mirbase.org...
Null hsa-miR-567 View Gene Set 4.696e-05 1183 0.0001975 161 microRNA targets for hsa-miR-567 from miranda.targets www.mirbase.org...
Null hsa-miR-30a View Gene Set 5.284e-05 1611 0.0002208 162 microRNA targets for hsa-miR-30a from miranda.targets www.mirbase.org...
Null hsa-miR-508-3p View Gene Set 5.351e-05 1088 0.0002222 163 microRNA targets for hsa-miR-508-3p from miranda.targets www.mirbase.org...
Null hsa-miR-1246 View Gene Set 6.115e-05 1219 0.0002524 164 microRNA targets for hsa-miR-1246 from miranda.targets www.mirbase.org...
Null hsa-miR-1322 View Gene Set 6.165e-05 811 0.0002529 165 microRNA targets for hsa-miR-1322 from miranda.targets www.mirbase.org...
Null hsa-miR-600 View Gene Set 6.251e-05 1431 0.0002549 166 microRNA targets for hsa-miR-600 from miranda.targets www.mirbase.org...
Null hsa-miR-1183 View Gene Set 6.445e-05 2417 0.0002613 167 microRNA targets for hsa-miR-1183 from miranda.targets www.mirbase.org...
Null hsa-miR-106b View Gene Set 7.086e-05 1804 0.0002855 168 microRNA targets for hsa-miR-106b from miranda.targets www.mirbase.org...
Null hsa-miR-199a-3p View Gene Set 7.449e-05 1232 0.0002967 169 microRNA targets for hsa-miR-199a-3p from miranda.targets www.mirbase.org...
Null hsa-miR-199b-3p View Gene Set 7.449e-05 1232 0.0002967 169 microRNA targets for hsa-miR-199b-3p from miranda.targets www.mirbase.org...
Null hsa-miR-498 View Gene Set 7.687e-05 1182 0.0003043 171 microRNA targets for hsa-miR-498 from miranda.targets www.mirbase.org...
Null hsa-miR-135a View Gene Set 7.748e-05 2105 0.000305 172 microRNA targets for hsa-miR-135a from miranda.targets www.mirbase.org...
Null hsa-miR-30c View Gene Set 8.659e-05 1792 0.0003389 173 microRNA targets for hsa-miR-30c from miranda.targets www.mirbase.org...
Null hsa-miR-140-5p View Gene Set 9.059e-05 1363 0.0003525 174 microRNA targets for hsa-miR-140-5p from miranda.targets www.mirbase.org...
Null hsa-miR-620 View Gene Set 9.246e-05 1508 0.0003577 175 microRNA targets for hsa-miR-620 from miranda.targets www.mirbase.org...
Null hsa-miR-216a View Gene Set 9.517e-05 1454 0.0003661 176 microRNA targets for hsa-miR-216a from miranda.targets www.mirbase.org...
Null hsa-miR-520h View Gene Set 9.603e-05 1820 0.0003673 177 microRNA targets for hsa-miR-520h from miranda.targets www.mirbase.org...
Null hsa-miR-219-5p View Gene Set 0.0001097 607 0.0004148 178 microRNA targets for hsa-miR-219-5p from miranda.targets www.mirbase.org...
Null hsa-miR-301b View Gene Set 0.0001094 2090 0.0004148 178 microRNA targets for hsa-miR-301b from miranda.targets www.mirbase.org...
Null hsa-miR-139-5p View Gene Set 0.0001418 1222 0.0005308 180 microRNA targets for hsa-miR-139-5p from miranda.targets www.mirbase.org...
Null hsa-miR-373 View Gene Set 0.0001419 2061 0.0005308 180 microRNA targets for hsa-miR-373 from miranda.targets www.mirbase.org...
Null hsa-miR-519d View Gene Set 0.0001438 1646 0.000532 182 microRNA targets for hsa-miR-519d from miranda.targets www.mirbase.org...
Null hsa-miR-7 View Gene Set 0.0001438 1890 0.000532 182 microRNA targets for hsa-miR-7 from miranda.targets www.mirbase.org...
Null hsa-miR-371-5p View Gene Set 0.0001493 1023 0.0005493 184 microRNA targets for hsa-miR-371-5p from miranda.targets www.mirbase.org...
Null hsa-miR-584 View Gene Set 0.0001524 1065 0.0005575 185 microRNA targets for hsa-miR-584 from miranda.targets www.mirbase.org...
Null hsa-miR-384 View Gene Set 0.0001549 1136 0.0005639 186 microRNA targets for hsa-miR-384 from miranda.targets www.mirbase.org...
Null hsa-miR-520b View Gene Set 0.0001628 1700 0.0005864 187 microRNA targets for hsa-miR-520b from miranda.targets www.mirbase.org...
Null hsa-miR-520c-3p View Gene Set 0.0001626 1842 0.0005864 187 microRNA targets for hsa-miR-520c-3p from miranda.targets www.mirbase.org...
Null hsa-miR-142-3p View Gene Set 0.0001758 1169 0.0006298 189 microRNA targets for hsa-miR-142-3p from miranda.targets www.mirbase.org...
Null hsa-miR-337-3p View Gene Set 0.0002256 876 0.0008037 190 microRNA targets for hsa-miR-337-3p from miranda.targets www.mirbase.org...
Null hsa-miR-519b-3p View Gene Set 0.0002321 1786 0.0008226 191 microRNA targets for hsa-miR-519b-3p from miranda.targets www.mirbase.org...
Null hsa-miR-216b View Gene Set 0.0002386 1416 0.0008415 192 microRNA targets for hsa-miR-216b from miranda.targets www.mirbase.org...
Null hsa-miR-330-3p View Gene Set 0.0002577 2124 0.0009038 193 microRNA targets for hsa-miR-330-3p from miranda.targets www.mirbase.org...
Null hsa-miR-135b View Gene Set 0.0002784 1979 0.0009715 194 microRNA targets for hsa-miR-135b from miranda.targets www.mirbase.org...
Null hsa-miR-542-3p View Gene Set 0.000297 1391 0.001031 195 microRNA targets for hsa-miR-542-3p from miranda.targets www.mirbase.org...
Null hsa-miR-206 View Gene Set 0.0003122 1605 0.001078 196 microRNA targets for hsa-miR-206 from miranda.targets www.mirbase.org...
Null hsa-miR-520e View Gene Set 0.0003258 1728 0.001119 197 microRNA targets for hsa-miR-520e from miranda.targets www.mirbase.org...
Null hsa-miR-421 View Gene Set 0.0003472 1629 0.001187 198 microRNA targets for hsa-miR-421 from miranda.targets www.mirbase.org...
Null hsa-miR-411 View Gene Set 0.0003503 558 0.001192 199 microRNA targets for hsa-miR-411 from miranda.targets www.mirbase.org...
Null hsa-miR-372 View Gene Set 0.0004555 1832 0.001542 200 microRNA targets for hsa-miR-372 from miranda.targets www.mirbase.org...

Gene Set Collection: mirbase.targets

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null hsa-miR-144 View Gene Set 7.506e-12 796 5.336e-09 1 microRNA targets for hsa-miR-144 from mirbase.targets www.mirbase.org...
Null hsa-miR-548d-3p View Gene Set 3.844e-10 978 1.367e-07 2 microRNA targets for hsa-miR-548d-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-208 View Gene Set 6.71e-09 664 1.59e-06 3 microRNA targets for hsa-miR-208 from mirbase.targets www.mirbase.org...
Null hsa-miR-208b View Gene Set 2.229e-08 678 3.962e-06 4 microRNA targets for hsa-miR-208b from mirbase.targets www.mirbase.org...
Null hsa-miR-561 View Gene Set 3.228e-08 651 4.59e-06 5 microRNA targets for hsa-miR-561 from mirbase.targets www.mirbase.org...
Null hsa-miR-7-2* View Gene Set 8.588e-08 531 1.018e-05 6 microRNA targets for hsa-miR-7-2* from mirbase.targets www.mirbase.org...
Null hsa-miR-548a-3p View Gene Set 1.403e-07 899 1.425e-05 7 microRNA targets for hsa-miR-548a-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-513-3p View Gene Set 2.628e-07 704 2.194e-05 8 microRNA targets for hsa-miR-513-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-656 View Gene Set 2.778e-07 514 2.194e-05 8 microRNA targets for hsa-miR-656 from mirbase.targets www.mirbase.org...
Null hsa-let-7b* View Gene Set 4.63e-07 772 3.292e-05 10 microRNA targets for hsa-let-7b* from mirbase.targets www.mirbase.org...
Null hsa-miR-548a-5p View Gene Set 8.306e-07 763 5.369e-05 11 microRNA targets for hsa-miR-548a-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-495 View Gene Set 1.286e-06 796 7.62e-05 12 microRNA targets for hsa-miR-495 from mirbase.targets www.mirbase.org...
Null hsa-miR-549 View Gene Set 1.769e-06 718 9.673e-05 13 microRNA targets for hsa-miR-549 from mirbase.targets www.mirbase.org...
Null hsa-miR-582-3p View Gene Set 2.471e-06 821 0.0001255 14 microRNA targets for hsa-miR-582-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-101 View Gene Set 2.726e-06 818 0.0001292 15 microRNA targets for hsa-miR-101 from mirbase.targets www.mirbase.org...
Null hsa-miR-200b View Gene Set 3.249e-06 854 0.0001438 16 microRNA targets for hsa-miR-200b from mirbase.targets www.mirbase.org...
Null hsa-miR-200c View Gene Set 3.638e-06 871 0.0001438 16 microRNA targets for hsa-miR-200c from mirbase.targets www.mirbase.org...
Null hsa-miR-548b-3p View Gene Set 3.641e-06 970 0.0001438 16 microRNA targets for hsa-miR-548b-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-454 View Gene Set 4.273e-06 769 0.0001599 19 microRNA targets for hsa-miR-454 from mirbase.targets www.mirbase.org...
Null hsa-miR-203 View Gene Set 4.759e-06 628 0.0001692 20 microRNA targets for hsa-miR-203 from mirbase.targets www.mirbase.org...
Null hsa-let-7a* View Gene Set 6.977e-06 772 0.0002362 21 microRNA targets for hsa-let-7a* from mirbase.targets www.mirbase.org...
Null hsa-miR-335 View Gene Set 7.659e-06 729 0.0002475 22 microRNA targets for hsa-miR-335 from mirbase.targets www.mirbase.org...
Null hsa-miR-374b View Gene Set 8.609e-06 574 0.0002661 23 microRNA targets for hsa-miR-374b from mirbase.targets www.mirbase.org...
Null hsa-miR-548b-5p View Gene Set 1.017e-05 818 0.0003014 24 microRNA targets for hsa-miR-548b-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-590-3p View Gene Set 1.343e-05 742 0.000382 25 microRNA targets for hsa-miR-590-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-655 View Gene Set 1.404e-05 654 0.0003839 26 microRNA targets for hsa-miR-655 from mirbase.targets www.mirbase.org...
Null hsa-miR-548d-5p View Gene Set 1.641e-05 795 0.000432 27 microRNA targets for hsa-miR-548d-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-522 View Gene Set 1.908e-05 665 0.0004844 28 microRNA targets for hsa-miR-522 from mirbase.targets www.mirbase.org...
Null hsa-miR-142-5p View Gene Set 2.204e-05 661 0.0005404 29 microRNA targets for hsa-miR-142-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-7-1* View Gene Set 2.426e-05 524 0.0005749 30 microRNA targets for hsa-miR-7-1* from mirbase.targets www.mirbase.org...
Null hsa-miR-200a View Gene Set 3.164e-05 908 0.0007256 31 microRNA targets for hsa-miR-200a from mirbase.targets www.mirbase.org...
Null hsa-miR-340 View Gene Set 3.763e-05 581 0.0008362 32 microRNA targets for hsa-miR-340 from mirbase.targets www.mirbase.org...
Null hsa-miR-130b View Gene Set 3.992e-05 809 0.0008602 33 microRNA targets for hsa-miR-130b from mirbase.targets www.mirbase.org...
Null hsa-miR-101* View Gene Set 4.513e-05 605 0.0009437 34 microRNA targets for hsa-miR-101* from mirbase.targets www.mirbase.org...
Null hsa-miR-369-3p View Gene Set 4.823e-05 750 0.0009798 35 microRNA targets for hsa-miR-369-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-519c-3p View Gene Set 5.18e-05 958 0.001023 36 microRNA targets for hsa-miR-519c-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-429 View Gene Set 5.588e-05 793 0.001074 37 microRNA targets for hsa-miR-429 from mirbase.targets www.mirbase.org...
Null hsa-miR-381 View Gene Set 6.26e-05 643 0.001171 38 microRNA targets for hsa-miR-381 from mirbase.targets www.mirbase.org...
Null hsa-miR-10a* View Gene Set 6.917e-05 585 0.001261 39 microRNA targets for hsa-miR-10a* from mirbase.targets www.mirbase.org...
Null hsa-miR-1 View Gene Set 7.639e-05 659 0.0013 40 microRNA targets for hsa-miR-1 from mirbase.targets www.mirbase.org...
Null hsa-miR-519a View Gene Set 7.68e-05 964 0.0013 40 microRNA targets for hsa-miR-519a from mirbase.targets www.mirbase.org...
Null hsa-miR-768-3p View Gene Set 7.333e-05 770 0.0013 40 microRNA targets for hsa-miR-768-3p from mirbase.targets www.mirbase.org...
Null hsa-let-7f-1* View Gene Set 8.748e-05 751 0.001446 43 microRNA targets for hsa-let-7f-1* from mirbase.targets www.mirbase.org...
Null hsa-miR-194 View Gene Set 9.185e-05 731 0.001484 44 microRNA targets for hsa-miR-194 from mirbase.targets www.mirbase.org...
Null hsa-miR-302b View Gene Set 9.738e-05 738 0.00151 45 microRNA targets for hsa-miR-302b from mirbase.targets www.mirbase.org...
Null hsa-miR-302b* View Gene Set 9.768e-05 683 0.00151 45 microRNA targets for hsa-miR-302b* from mirbase.targets www.mirbase.org...
Null hsa-miR-26a View Gene Set 0.000128 718 0.001936 47 microRNA targets for hsa-miR-26a from mirbase.targets www.mirbase.org...
Null hsa-miR-300 View Gene Set 0.0001366 672 0.001952 48 microRNA targets for hsa-miR-300 from mirbase.targets www.mirbase.org...
Null hsa-miR-520c-3p View Gene Set 0.0001356 848 0.001952 48 microRNA targets for hsa-miR-520c-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-548c-3p View Gene Set 0.0001373 863 0.001952 48 microRNA targets for hsa-miR-548c-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-105 View Gene Set 0.0001501 719 0.002086 51 microRNA targets for hsa-miR-105 from mirbase.targets www.mirbase.org...
Null hsa-miR-10b* View Gene Set 0.0001526 651 0.002086 51 microRNA targets for hsa-miR-10b* from mirbase.targets www.mirbase.org...
Null hsa-miR-451 View Gene Set 0.0001865 766 0.002467 53 microRNA targets for hsa-miR-451 from mirbase.targets www.mirbase.org...
Null hsa-miR-487a View Gene Set 0.0001874 689 0.002467 53 microRNA targets for hsa-miR-487a from mirbase.targets www.mirbase.org...
Null hsa-miR-450b-5p View Gene Set 0.0002035 732 0.002631 55 microRNA targets for hsa-miR-450b-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-21 View Gene Set 0.0002824 724 0.003585 56 microRNA targets for hsa-miR-21 from mirbase.targets www.mirbase.org...
Null hsa-miR-141 View Gene Set 0.0003006 812 0.00375 57 microRNA targets for hsa-miR-141 from mirbase.targets www.mirbase.org...
Null hsa-miR-545* View Gene Set 0.0003062 518 0.003753 58 microRNA targets for hsa-miR-545* from mirbase.targets www.mirbase.org...
Null hsa-miR-567 View Gene Set 0.000316 618 0.003808 59 microRNA targets for hsa-miR-567 from mirbase.targets www.mirbase.org...
Null hsa-miR-302d* View Gene Set 0.0004616 693 0.00547 60 microRNA targets for hsa-miR-302d* from mirbase.targets www.mirbase.org...
Null hsa-miR-302a* View Gene Set 0.0004727 644 0.00551 61 microRNA targets for hsa-miR-302a* from mirbase.targets www.mirbase.org...
Null hsa-miR-323-3p View Gene Set 0.0005151 756 0.005814 62 microRNA targets for hsa-miR-323-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-338-5p View Gene Set 0.0005092 814 0.005814 62 microRNA targets for hsa-miR-338-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-891b View Gene Set 0.0005386 755 0.005984 64 microRNA targets for hsa-miR-891b from mirbase.targets www.mirbase.org...
Null hsa-miR-374a View Gene Set 0.0005775 548 0.006254 65 microRNA targets for hsa-miR-374a from mirbase.targets www.mirbase.org...
Null hsa-miR-488 View Gene Set 0.0005805 657 0.006254 65 microRNA targets for hsa-miR-488 from mirbase.targets www.mirbase.org...
Null hsa-miR-154* View Gene Set 0.0006026 516 0.006395 67 microRNA targets for hsa-miR-154* from mirbase.targets www.mirbase.org...
Null hsa-miR-520b View Gene Set 0.0006244 833 0.006529 68 microRNA targets for hsa-miR-520b from mirbase.targets www.mirbase.org...
Null hsa-miR-580 View Gene Set 0.0006995 530 0.007105 69 microRNA targets for hsa-miR-580 from mirbase.targets www.mirbase.org...
Null hsa-miR-583 View Gene Set 0.0006964 632 0.007105 69 microRNA targets for hsa-miR-583 from mirbase.targets www.mirbase.org...
Null hsa-miR-16-1* View Gene Set 0.0007507 557 0.007311 71 microRNA targets for hsa-miR-16-1* from mirbase.targets www.mirbase.org...
Null hsa-miR-30c View Gene Set 0.0007499 799 0.007311 71 microRNA targets for hsa-miR-30c from mirbase.targets www.mirbase.org...
Null hsa-miR-500 View Gene Set 0.0007403 620 0.007311 71 microRNA targets for hsa-miR-500 from mirbase.targets www.mirbase.org...
Null hsa-miR-520a-3p View Gene Set 0.0007659 842 0.007359 74 microRNA targets for hsa-miR-520a-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-568 View Gene Set 0.0008756 649 0.008301 75 microRNA targets for hsa-miR-568 from mirbase.targets www.mirbase.org...
Null hsa-miR-519b-3p View Gene Set 0.0008998 957 0.008418 76 microRNA targets for hsa-miR-519b-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-154 View Gene Set 0.0009197 649 0.008492 77 microRNA targets for hsa-miR-154 from mirbase.targets www.mirbase.org...
Null hsa-miR-383 View Gene Set 0.0009533 748 0.008689 78 microRNA targets for hsa-miR-383 from mirbase.targets www.mirbase.org...
Null hsa-miR-186 View Gene Set 0.00102 589 0.009178 79 microRNA targets for hsa-miR-186 from mirbase.targets www.mirbase.org...
Null hsa-miR-548c-5p View Gene Set 0.001087 801 0.009659 80 microRNA targets for hsa-miR-548c-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-146b-5p View Gene Set 0.001153 690 0.01012 81 microRNA targets for hsa-miR-146b-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-410 View Gene Set 0.001324 614 0.01148 82 microRNA targets for hsa-miR-410 from mirbase.targets www.mirbase.org...
Null hsa-miR-9* View Gene Set 0.001373 570 0.01176 83 microRNA targets for hsa-miR-9* from mirbase.targets www.mirbase.org...
Null hsa-miR-889 View Gene Set 0.001479 650 0.01252 84 microRNA targets for hsa-miR-889 from mirbase.targets www.mirbase.org...
Null hsa-miR-30d* View Gene Set 0.001645 717 0.0136 85 microRNA targets for hsa-miR-30d* from mirbase.targets www.mirbase.org...
Null hsa-miR-496 View Gene Set 0.001636 640 0.0136 85 microRNA targets for hsa-miR-496 from mirbase.targets www.mirbase.org...
Null hsa-miR-30b View Gene Set 0.0017 807 0.0139 87 microRNA targets for hsa-miR-30b from mirbase.targets www.mirbase.org...
Null hsa-miR-450a View Gene Set 0.001769 787 0.01405 88 microRNA targets for hsa-miR-450a from mirbase.targets www.mirbase.org...
Null hsa-miR-553 View Gene Set 0.001773 672 0.01405 88 microRNA targets for hsa-miR-553 from mirbase.targets www.mirbase.org...
Null hsa-miR-651 View Gene Set 0.001778 676 0.01405 88 microRNA targets for hsa-miR-651 from mirbase.targets www.mirbase.org...
Null hsa-miR-301b View Gene Set 0.001815 763 0.01418 91 microRNA targets for hsa-miR-301b from mirbase.targets www.mirbase.org...
Null hsa-miR-34b View Gene Set 0.001921 776 0.01484 92 microRNA targets for hsa-miR-34b from mirbase.targets www.mirbase.org...
Null hsa-miR-587 View Gene Set 0.001967 739 0.01504 93 microRNA targets for hsa-miR-587 from mirbase.targets www.mirbase.org...
Null hsa-miR-499-5p View Gene Set 0.002319 761 0.01754 94 microRNA targets for hsa-miR-499-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-524-5p View Gene Set 0.002347 708 0.01756 95 microRNA targets for hsa-miR-524-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-206 View Gene Set 0.002373 683 0.01757 96 microRNA targets for hsa-miR-206 from mirbase.targets www.mirbase.org...
Null hsa-miR-302a View Gene Set 0.002421 711 0.01775 97 microRNA targets for hsa-miR-302a from mirbase.targets www.mirbase.org...
Null hsa-miR-452 View Gene Set 0.002462 729 0.01786 98 microRNA targets for hsa-miR-452 from mirbase.targets www.mirbase.org...
Null hsa-miR-202 View Gene Set 0.0026 754 0.01867 99 microRNA targets for hsa-miR-202 from mirbase.targets www.mirbase.org...
Null hsa-miR-520d-3p View Gene Set 0.002655 852 0.01888 100 microRNA targets for hsa-miR-520d-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-302c View Gene Set 0.002755 737 0.0192 101 microRNA targets for hsa-miR-302c from mirbase.targets www.mirbase.org...
Null hsa-miR-559 View Gene Set 0.002737 463 0.0192 101 microRNA targets for hsa-miR-559 from mirbase.targets www.mirbase.org...
Null hsa-miR-23a View Gene Set 0.002805 807 0.01936 103 microRNA targets for hsa-miR-23a from mirbase.targets www.mirbase.org...
Null hsa-miR-570 View Gene Set 0.003033 603 0.02073 104 microRNA targets for hsa-miR-570 from mirbase.targets www.mirbase.org...
Null hsa-let-7d* View Gene Set 0.003326 781 0.0221 105 microRNA targets for hsa-let-7d* from mirbase.targets www.mirbase.org...
Null hsa-miR-33a* View Gene Set 0.003307 530 0.0221 105 microRNA targets for hsa-miR-33a* from mirbase.targets www.mirbase.org...
Null hsa-miR-520d-5p View Gene Set 0.003315 832 0.0221 105 microRNA targets for hsa-miR-520d-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-302c* View Gene Set 0.003408 615 0.02244 108 microRNA targets for hsa-miR-302c* from mirbase.targets www.mirbase.org...
Null hsa-miR-196a View Gene Set 0.003505 808 0.02286 109 microRNA targets for hsa-miR-196a from mirbase.targets www.mirbase.org...
Null hsa-miR-181d View Gene Set 0.003601 864 0.02328 110 microRNA targets for hsa-miR-181d from mirbase.targets www.mirbase.org...
Null hsa-miR-633 View Gene Set 0.003643 568 0.02333 111 microRNA targets for hsa-miR-633 from mirbase.targets www.mirbase.org...
Null hsa-miR-137 View Gene Set 0.003791 775 0.02406 112 microRNA targets for hsa-miR-137 from mirbase.targets www.mirbase.org...
Null hsa-miR-130a View Gene Set 0.003874 807 0.02437 113 microRNA targets for hsa-miR-130a from mirbase.targets www.mirbase.org...
Null hsa-miR-142-3p View Gene Set 0.004019 756 0.02507 114 microRNA targets for hsa-miR-142-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-603 View Gene Set 0.004136 667 0.02513 115 microRNA targets for hsa-miR-603 from mirbase.targets www.mirbase.org...
Null hsa-miR-606 View Gene Set 0.004123 596 0.02513 115 microRNA targets for hsa-miR-606 from mirbase.targets www.mirbase.org...
Null hsa-miR-802 View Gene Set 0.004123 683 0.02513 115 microRNA targets for hsa-miR-802 from mirbase.targets www.mirbase.org...
Null hsa-miR-182 View Gene Set 0.004193 707 0.02519 118 microRNA targets for hsa-miR-182 from mirbase.targets www.mirbase.org...
Null hsa-miR-23b View Gene Set 0.004216 772 0.02519 118 microRNA targets for hsa-miR-23b from mirbase.targets www.mirbase.org...
Null hsa-let-7f-2* View Gene Set 0.00457 820 0.02708 120 microRNA targets for hsa-let-7f-2* from mirbase.targets www.mirbase.org...
Null hsa-miR-26b View Gene Set 0.004697 696 0.02726 121 microRNA targets for hsa-miR-26b from mirbase.targets www.mirbase.org...
Null hsa-miR-34c-3p View Gene Set 0.004716 764 0.02726 121 microRNA targets for hsa-miR-34c-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-562 View Gene Set 0.004671 697 0.02726 121 microRNA targets for hsa-miR-562 from mirbase.targets www.mirbase.org...
Null hsa-miR-20b* View Gene Set 0.004855 527 0.02784 124 microRNA targets for hsa-miR-20b* from mirbase.targets www.mirbase.org...
Null hsa-miR-376a* View Gene Set 0.004946 592 0.02813 125 microRNA targets for hsa-miR-376a* from mirbase.targets www.mirbase.org...
Null hsa-miR-217 View Gene Set 0.005373 665 0.03032 126 microRNA targets for hsa-miR-217 from mirbase.targets www.mirbase.org...
Null hsa-miR-19a View Gene Set 0.005484 803 0.0307 127 microRNA targets for hsa-miR-19a from mirbase.targets www.mirbase.org...
Null hsa-miR-542-3p View Gene Set 0.005813 728 0.03229 128 microRNA targets for hsa-miR-542-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-582-5p View Gene Set 0.006022 759 0.03319 129 microRNA targets for hsa-miR-582-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-16 View Gene Set 0.006252 780 0.03419 130 microRNA targets for hsa-miR-16 from mirbase.targets www.mirbase.org...
Null hsa-miR-320 View Gene Set 0.006909 771 0.03721 131 microRNA targets for hsa-miR-320 from mirbase.targets www.mirbase.org...
Null hsa-miR-33a View Gene Set 0.006869 753 0.03721 131 microRNA targets for hsa-miR-33a from mirbase.targets www.mirbase.org...
Null hsa-miR-607 View Gene Set 0.007013 620 0.03749 133 microRNA targets for hsa-miR-607 from mirbase.targets www.mirbase.org...
Null hsa-miR-374a* View Gene Set 0.007295 491 0.0387 134 microRNA targets for hsa-miR-374a* from mirbase.targets www.mirbase.org...
Null hsa-miR-518c View Gene Set 0.007352 921 0.03872 135 microRNA targets for hsa-miR-518c from mirbase.targets www.mirbase.org...
Null hsa-miR-200a* View Gene Set 0.007781 623 0.04068 136 microRNA targets for hsa-miR-200a* from mirbase.targets www.mirbase.org...
Null hsa-miR-219-2-3p View Gene Set 0.007995 696 0.04149 137 microRNA targets for hsa-miR-219-2-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-181b View Gene Set 0.008215 874 0.04232 138 microRNA targets for hsa-miR-181b from mirbase.targets www.mirbase.org...
Null hsa-miR-325 View Gene Set 0.009209 720 0.0471 139 microRNA targets for hsa-miR-325 from mirbase.targets www.mirbase.org...
Null hsa-miR-384 View Gene Set 0.009281 635 0.04713 140 microRNA targets for hsa-miR-384 from mirbase.targets www.mirbase.org...
Null hsa-miR-20a* View Gene Set 0.009757 613 0.0492 141 microRNA targets for hsa-miR-20a* from mirbase.targets www.mirbase.org...

Gene Set Collection: mirtarget2.targets

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null hsa-miR-548c-3p View Gene Set 1.679e-22 1804 9.283e-20 1 microRNA targets for hsa-miR-548c-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-590-3p View Gene Set 2.832e-21 2046 7.83e-19 2 microRNA targets for hsa-miR-590-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-513-3p View Gene Set 3.715e-20 1119 6.849e-18 3 microRNA targets for hsa-miR-513-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-548a-5p View Gene Set 7.697e-16 1120 1.064e-13 4 microRNA targets for hsa-miR-548a-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-561 View Gene Set 1.172e-15 1193 1.296e-13 5 microRNA targets for hsa-miR-561 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-548c-5p View Gene Set 4.744e-15 1151 4.372e-13 6 microRNA targets for hsa-miR-548c-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-548b-5p View Gene Set 3.633e-14 1157 2.87e-12 7 microRNA targets for hsa-miR-548b-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-548d-5p View Gene Set 9.749e-14 1147 6.739e-12 8 microRNA targets for hsa-miR-548d-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-559 View Gene Set 5.126e-13 977 3.15e-11 9 microRNA targets for hsa-miR-559 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-495 View Gene Set 1.734e-12 1246 9.591e-11 10 microRNA targets for hsa-miR-495 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-548d-3p View Gene Set 3.602e-12 1107 1.811e-10 11 microRNA targets for hsa-miR-548d-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-186 View Gene Set 7.515e-12 1020 3.463e-10 12 microRNA targets for hsa-miR-186 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-548a-3p View Gene Set 4.59e-11 900 1.952e-09 13 microRNA targets for hsa-miR-548a-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-570 View Gene Set 8.708e-11 983 3.44e-09 14 microRNA targets for hsa-miR-570 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-141 View Gene Set 4.02e-10 574 1.429e-08 15 microRNA targets for hsa-miR-141 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-944 View Gene Set 4.136e-10 1362 1.429e-08 15 microRNA targets for hsa-miR-944 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-410 View Gene Set 5.926e-10 563 1.928e-08 17 microRNA targets for hsa-miR-410 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-200c View Gene Set 7.242e-10 668 2.225e-08 18 microRNA targets for hsa-miR-200c from mirtarget2.targets www.mirbase.org...
Null hsa-miR-340 View Gene Set 7.666e-10 874 2.231e-08 19 microRNA targets for hsa-miR-340 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-144 View Gene Set 1.552e-09 649 4.29e-08 20 microRNA targets for hsa-miR-144 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-200a View Gene Set 1.931e-09 589 4.883e-08 21 microRNA targets for hsa-miR-200a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-607 View Gene Set 1.943e-09 1137 4.883e-08 21 microRNA targets for hsa-miR-607 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-200b View Gene Set 2.875e-09 671 6.913e-08 23 microRNA targets for hsa-miR-200b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-338-5p View Gene Set 6.193e-09 948 1.37e-07 24 microRNA targets for hsa-miR-338-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-369-3p View Gene Set 5.995e-09 686 1.37e-07 24 microRNA targets for hsa-miR-369-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-34b View Gene Set 7.435e-09 350 1.581e-07 26 microRNA targets for hsa-miR-34b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-576-5p View Gene Set 1.33e-08 589 2.724e-07 27 microRNA targets for hsa-miR-576-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-520d-5p View Gene Set 1.432e-08 826 2.828e-07 28 microRNA targets for hsa-miR-520d-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-582-5p View Gene Set 2.128e-08 526 4.058e-07 29 microRNA targets for hsa-miR-582-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-524-5p View Gene Set 3.834e-08 862 7.067e-07 30 microRNA targets for hsa-miR-524-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-320 View Gene Set 5.575e-08 550 9.944e-07 31 microRNA targets for hsa-miR-320 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-181b View Gene Set 6.352e-08 887 1.098e-06 32 microRNA targets for hsa-miR-181b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-181d View Gene Set 8.596e-08 882 1.441e-06 33 microRNA targets for hsa-miR-181d from mirtarget2.targets www.mirbase.org...
Null hsa-miR-429 View Gene Set 1.04e-07 640 1.692e-06 34 microRNA targets for hsa-miR-429 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-181a View Gene Set 1.238e-07 879 1.911e-06 35 microRNA targets for hsa-miR-181a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-380 View Gene Set 1.244e-07 496 1.911e-06 35 microRNA targets for hsa-miR-380 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-450b-5p View Gene Set 1.375e-07 691 2.055e-06 37 microRNA targets for hsa-miR-450b-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-23a View Gene Set 1.568e-07 858 2.282e-06 38 microRNA targets for hsa-miR-23a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-181c View Gene Set 1.62e-07 909 2.297e-06 39 microRNA targets for hsa-miR-181c from mirtarget2.targets www.mirbase.org...
Null hsa-miR-522 View Gene Set 1.904e-07 618 2.632e-06 40 microRNA targets for hsa-miR-522 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-543 View Gene Set 2.29e-07 710 3.089e-06 41 microRNA targets for hsa-miR-543 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-203 View Gene Set 2.433e-07 754 3.204e-06 42 microRNA targets for hsa-miR-203 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-23b View Gene Set 3.987e-07 875 5.127e-06 43 microRNA targets for hsa-miR-23b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-802 View Gene Set 4.179e-07 428 5.253e-06 44 microRNA targets for hsa-miR-802 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-641 View Gene Set 5.609e-07 659 6.811e-06 45 microRNA targets for hsa-miR-641 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-655 View Gene Set 5.666e-07 820 6.811e-06 45 microRNA targets for hsa-miR-655 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-195 View Gene Set 6.795e-07 491 7.995e-06 47 microRNA targets for hsa-miR-195 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-768-3p View Gene Set 7.867e-07 333 9.063e-06 48 microRNA targets for hsa-miR-768-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-15a View Gene Set 9.766e-07 567 1.08e-05 49 microRNA targets for hsa-miR-15a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-337-3p View Gene Set 9.654e-07 231 1.08e-05 49 microRNA targets for hsa-miR-337-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-539 View Gene Set 1.019e-06 601 1.105e-05 51 microRNA targets for hsa-miR-539 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-15b View Gene Set 1.053e-06 575 1.12e-05 52 microRNA targets for hsa-miR-15b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-656 View Gene Set 1.443e-06 876 1.505e-05 53 microRNA targets for hsa-miR-656 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-142-5p View Gene Set 1.556e-06 727 1.565e-05 54 microRNA targets for hsa-miR-142-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-549 View Gene Set 1.556e-06 200 1.565e-05 54 microRNA targets for hsa-miR-549 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-16 View Gene Set 1.953e-06 496 1.929e-05 56 microRNA targets for hsa-miR-16 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-374b View Gene Set 2.056e-06 902 1.995e-05 57 microRNA targets for hsa-miR-374b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-330-3p View Gene Set 2.238e-06 682 2.134e-05 58 microRNA targets for hsa-miR-330-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-586 View Gene Set 3.77e-06 587 3.533e-05 59 microRNA targets for hsa-miR-586 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-498 View Gene Set 3.983e-06 326 3.671e-05 60 microRNA targets for hsa-miR-498 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-582-3p View Gene Set 4.663e-06 231 4.228e-05 61 microRNA targets for hsa-miR-582-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-367 View Gene Set 5.509e-06 388 4.914e-05 62 microRNA targets for hsa-miR-367 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-105 View Gene Set 8.018e-06 524 7.038e-05 63 microRNA targets for hsa-miR-105 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-219-2-3p View Gene Set 8.667e-06 256 7.488e-05 64 microRNA targets for hsa-miR-219-2-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-425 View Gene Set 1.041e-05 237 8.855e-05 65 microRNA targets for hsa-miR-425 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-587 View Gene Set 1.096e-05 590 9.179e-05 66 microRNA targets for hsa-miR-587 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-889 View Gene Set 1.178e-05 370 9.725e-05 67 microRNA targets for hsa-miR-889 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-216b View Gene Set 1.304e-05 392 0.0001045 68 microRNA targets for hsa-miR-216b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-374a View Gene Set 1.296e-05 894 0.0001045 68 microRNA targets for hsa-miR-374a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-26a View Gene Set 1.359e-05 498 0.0001074 70 microRNA targets for hsa-miR-26a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-188-3p View Gene Set 1.469e-05 319 0.0001132 71 microRNA targets for hsa-miR-188-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-361-5p View Gene Set 1.473e-05 321 0.0001132 71 microRNA targets for hsa-miR-361-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-532-5p View Gene Set 1.638e-05 279 0.0001241 73 microRNA targets for hsa-miR-532-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-577 View Gene Set 2.071e-05 731 0.0001527 74 microRNA targets for hsa-miR-577 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-92a View Gene Set 2.069e-05 359 0.0001527 74 microRNA targets for hsa-miR-92a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-888 View Gene Set 2.108e-05 450 0.0001534 76 microRNA targets for hsa-miR-888 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-217 View Gene Set 2.421e-05 365 0.0001739 77 microRNA targets for hsa-miR-217 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-579 View Gene Set 2.478e-05 625 0.0001757 78 microRNA targets for hsa-miR-579 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-433 View Gene Set 2.851e-05 301 0.0001996 79 microRNA targets for hsa-miR-433 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-32 View Gene Set 2.995e-05 373 0.000207 80 microRNA targets for hsa-miR-32 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-323-3p View Gene Set 3.841e-05 402 0.0002622 81 microRNA targets for hsa-miR-323-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-875-5p View Gene Set 4.66e-05 150 0.0003143 82 microRNA targets for hsa-miR-875-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-182 View Gene Set 5.259e-05 478 0.0003504 83 microRNA targets for hsa-miR-182 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-509-5p View Gene Set 5.536e-05 365 0.0003645 84 microRNA targets for hsa-miR-509-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-92b View Gene Set 6.175e-05 367 0.0004017 85 microRNA targets for hsa-miR-92b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-526b View Gene Set 6.27e-05 228 0.0004032 86 microRNA targets for hsa-miR-526b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-500 View Gene Set 6.547e-05 378 0.0004162 87 microRNA targets for hsa-miR-500 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-488 View Gene Set 7.264e-05 342 0.0004565 88 microRNA targets for hsa-miR-488 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-497 View Gene Set 7.593e-05 668 0.0004718 89 microRNA targets for hsa-miR-497 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-509-3-5p View Gene Set 8.313e-05 344 0.0005052 90 microRNA targets for hsa-miR-509-3-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-872 View Gene Set 8.262e-05 160 0.0005052 90 microRNA targets for hsa-miR-872 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-424 View Gene Set 8.767e-05 628 0.000527 92 microRNA targets for hsa-miR-424 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-499-3p View Gene Set 0.0001158 327 0.0006887 93 microRNA targets for hsa-miR-499-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-26b View Gene Set 0.0001193 493 0.0007021 94 microRNA targets for hsa-miR-26b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-505 View Gene Set 0.0001295 240 0.0007537 95 microRNA targets for hsa-miR-505 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-653 View Gene Set 0.0001314 305 0.0007569 96 microRNA targets for hsa-miR-653 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-568 View Gene Set 0.0001595 521 0.0009096 97 microRNA targets for hsa-miR-568 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-630 View Gene Set 0.0001752 248 0.0009889 98 microRNA targets for hsa-miR-630 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-363 View Gene Set 0.0001815 365 0.001014 99 microRNA targets for hsa-miR-363 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-544 View Gene Set 0.0001877 484 0.001038 100 microRNA targets for hsa-miR-544 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-409-3p View Gene Set 0.0001947 372 0.001066 101 microRNA targets for hsa-miR-409-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-617 View Gene Set 0.0002085 145 0.00113 102 microRNA targets for hsa-miR-617 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-501-5p View Gene Set 0.0002107 462 0.001131 103 microRNA targets for hsa-miR-501-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-499-5p View Gene Set 0.0002342 307 0.001245 104 microRNA targets for hsa-miR-499-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-25 View Gene Set 0.0002502 398 0.001313 105 microRNA targets for hsa-miR-25 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-421 View Gene Set 0.0002517 334 0.001313 105 microRNA targets for hsa-miR-421 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-452 View Gene Set 0.0002573 577 0.00133 107 microRNA targets for hsa-miR-452 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-221 View Gene Set 0.0002634 264 0.001348 108 microRNA targets for hsa-miR-221 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-300 View Gene Set 0.0002744 528 0.001368 109 microRNA targets for hsa-miR-300 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-30a View Gene Set 0.0002746 680 0.001368 109 microRNA targets for hsa-miR-30a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-640 View Gene Set 0.0002743 166 0.001368 109 microRNA targets for hsa-miR-640 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-871 View Gene Set 0.0002968 570 0.001466 112 microRNA targets for hsa-miR-871 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-651 View Gene Set 0.0003009 250 0.001472 113 microRNA targets for hsa-miR-651 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-613 View Gene Set 0.0003438 322 0.001668 114 microRNA targets for hsa-miR-613 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-515-5p View Gene Set 0.0003629 396 0.00173 115 microRNA targets for hsa-miR-515-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-636 View Gene Set 0.000362 149 0.00173 115 microRNA targets for hsa-miR-636 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-634 View Gene Set 0.0003933 215 0.001859 117 microRNA targets for hsa-miR-634 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-124 View Gene Set 0.0004208 432 0.001972 118 microRNA targets for hsa-miR-124 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-199a-3p View Gene Set 0.0004341 262 0.002 119 microRNA targets for hsa-miR-199a-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-199b-3p View Gene Set 0.0004341 262 0.002 119 microRNA targets for hsa-miR-199b-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-603 View Gene Set 0.000448 446 0.002047 121 microRNA targets for hsa-miR-603 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-892b View Gene Set 0.0004997 290 0.002265 122 microRNA targets for hsa-miR-892b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-107 View Gene Set 0.0005167 338 0.002323 123 microRNA targets for hsa-miR-107 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-485-3p View Gene Set 0.0005765 370 0.002571 124 microRNA targets for hsa-miR-485-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-206 View Gene Set 0.0006077 358 0.002688 125 microRNA targets for hsa-miR-206 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-224 View Gene Set 0.0006303 370 0.002766 126 microRNA targets for hsa-miR-224 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-595 View Gene Set 0.0006601 245 0.002874 127 microRNA targets for hsa-miR-595 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-135a View Gene Set 0.0006763 301 0.002922 128 microRNA targets for hsa-miR-135a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-222 View Gene Set 0.0007107 243 0.003047 129 microRNA targets for hsa-miR-222 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-371-5p View Gene Set 0.0007893 354 0.003358 130 microRNA targets for hsa-miR-371-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-633 View Gene Set 0.0008095 303 0.003417 131 microRNA targets for hsa-miR-633 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-194 View Gene Set 0.0008202 291 0.003436 132 microRNA targets for hsa-miR-194 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-155 View Gene Set 0.0008326 427 0.003442 133 microRNA targets for hsa-miR-155 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-506 View Gene Set 0.0008346 439 0.003442 133 microRNA targets for hsa-miR-506 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-520a-5p View Gene Set 0.0008403 294 0.003442 133 microRNA targets for hsa-miR-520a-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-381 View Gene Set 0.0009103 544 0.003702 136 microRNA targets for hsa-miR-381 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-202 View Gene Set 0.0009218 181 0.003721 137 microRNA targets for hsa-miR-202 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-216a View Gene Set 0.0009567 352 0.003834 138 microRNA targets for hsa-miR-216a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-30e View Gene Set 0.0009808 693 0.003902 139 microRNA targets for hsa-miR-30e from mirtarget2.targets www.mirbase.org...
Null hsa-miR-643 View Gene Set 0.001067 292 0.004215 140 microRNA targets for hsa-miR-643 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-152 View Gene Set 0.00111 337 0.004316 141 microRNA targets for hsa-miR-152 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-192 View Gene Set 0.001111 121 0.004316 141 microRNA targets for hsa-miR-192 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-34c-3p View Gene Set 0.001116 230 0.004316 141 microRNA targets for hsa-miR-34c-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-30d View Gene Set 0.001144 694 0.004344 144 microRNA targets for hsa-miR-30d from mirtarget2.targets www.mirbase.org...
Null hsa-miR-525-5p View Gene Set 0.001139 285 0.004344 144 microRNA targets for hsa-miR-525-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-7 View Gene Set 0.001147 253 0.004344 144 microRNA targets for hsa-miR-7 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-646 View Gene Set 0.001179 365 0.004434 147 microRNA targets for hsa-miR-646 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-556-3p View Gene Set 0.001277 245 0.004771 148 microRNA targets for hsa-miR-556-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-127-5p View Gene Set 0.001302 274 0.004809 149 microRNA targets for hsa-miR-127-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-619 View Gene Set 0.001304 160 0.004809 149 microRNA targets for hsa-miR-619 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-584 View Gene Set 0.001401 278 0.005096 151 microRNA targets for hsa-miR-584 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-600 View Gene Set 0.001397 310 0.005096 151 microRNA targets for hsa-miR-600 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-135b View Gene Set 0.001427 296 0.005144 153 microRNA targets for hsa-miR-135b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-139-5p View Gene Set 0.001433 286 0.005144 153 microRNA targets for hsa-miR-139-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-554 View Gene Set 0.001483 72 0.005291 155 microRNA targets for hsa-miR-554 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-1 View Gene Set 0.001498 342 0.005309 156 microRNA targets for hsa-miR-1 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-136 View Gene Set 0.001529 307 0.005369 157 microRNA targets for hsa-miR-136 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-520g View Gene Set 0.001544 429 0.005369 157 microRNA targets for hsa-miR-520g from mirtarget2.targets www.mirbase.org...
Null hsa-miR-606 View Gene Set 0.001536 282 0.005369 157 microRNA targets for hsa-miR-606 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-654-3p View Gene Set 0.00156 217 0.005393 160 microRNA targets for hsa-miR-654-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-137 View Gene Set 0.001572 415 0.005399 161 microRNA targets for hsa-miR-137 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-494 View Gene Set 0.001589 696 0.005423 162 microRNA targets for hsa-miR-494 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-28-3p View Gene Set 0.001601 175 0.005433 163 microRNA targets for hsa-miR-28-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-376c View Gene Set 0.001632 327 0.005503 164 microRNA targets for hsa-miR-376c from mirtarget2.targets www.mirbase.org...
Null hsa-miR-501-3p View Gene Set 0.001706 140 0.005683 165 microRNA targets for hsa-miR-501-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-555 View Gene Set 0.001699 91 0.005683 165 microRNA targets for hsa-miR-555 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-148a View Gene Set 0.001858 325 0.006115 167 microRNA targets for hsa-miR-148a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-545 View Gene Set 0.001848 600 0.006115 167 microRNA targets for hsa-miR-545 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-103 View Gene Set 0.001893 337 0.006195 169 microRNA targets for hsa-miR-103 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-125b View Gene Set 0.001917 176 0.006234 170 microRNA targets for hsa-miR-125b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-548b-3p View Gene Set 0.002012 264 0.006508 171 microRNA targets for hsa-miR-548b-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-520h View Gene Set 0.002079 428 0.006684 172 microRNA targets for hsa-miR-520h from mirtarget2.targets www.mirbase.org...
Null hsa-miR-496 View Gene Set 0.002117 225 0.006767 173 microRNA targets for hsa-miR-496 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-502-3p View Gene Set 0.002191 143 0.006963 174 microRNA targets for hsa-miR-502-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-9 View Gene Set 0.002479 423 0.007835 175 microRNA targets for hsa-miR-9 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-301b View Gene Set 0.002592 442 0.008143 176 microRNA targets for hsa-miR-301b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-448 View Gene Set 0.002677 500 0.008363 177 microRNA targets for hsa-miR-448 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-132 View Gene Set 0.002894 296 0.008991 178 microRNA targets for hsa-miR-132 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-21 View Gene Set 0.0031 312 0.009578 179 microRNA targets for hsa-miR-21 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-411 View Gene Set 0.003212 130 0.009868 180 microRNA targets for hsa-miR-411 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-30b View Gene Set 0.003232 670 0.009875 181 microRNA targets for hsa-miR-30b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-219-5p View Gene Set 0.00326 102 0.009905 182 microRNA targets for hsa-miR-219-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-33b View Gene Set 0.00365 218 0.01099 183 microRNA targets for hsa-miR-33b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-629 View Gene Set 0.003656 187 0.01099 183 microRNA targets for hsa-miR-629 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-148b View Gene Set 0.003716 329 0.01111 185 microRNA targets for hsa-miR-148b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-578 View Gene Set 0.003759 487 0.01118 186 microRNA targets for hsa-miR-578 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-150 View Gene Set 0.003844 284 0.01137 187 microRNA targets for hsa-miR-150 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-454 View Gene Set 0.003868 442 0.01138 188 microRNA targets for hsa-miR-454 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-875-3p View Gene Set 0.003949 635 0.01155 189 microRNA targets for hsa-miR-875-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-140-3p View Gene Set 0.004001 246 0.01158 190 microRNA targets for hsa-miR-140-3p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-942 View Gene Set 0.004001 512 0.01158 190 microRNA targets for hsa-miR-942 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-583 View Gene Set 0.004523 431 0.01303 192 microRNA targets for hsa-miR-583 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-301a View Gene Set 0.004652 448 0.01333 193 microRNA targets for hsa-miR-301a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-921 View Gene Set 0.004927 105 0.01404 194 microRNA targets for hsa-miR-921 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-130b View Gene Set 0.005004 445 0.01419 195 microRNA targets for hsa-miR-130b from mirtarget2.targets www.mirbase.org...
Null hsa-miR-218 View Gene Set 0.005041 408 0.01422 196 microRNA targets for hsa-miR-218 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-199b-5p View Gene Set 0.005244 224 0.01465 197 microRNA targets for hsa-miR-199b-5p from mirtarget2.targets www.mirbase.org...
Null hsa-miR-562 View Gene Set 0.005237 213 0.01465 197 microRNA targets for hsa-miR-562 from mirtarget2.targets www.mirbase.org...
Null hsa-miR-130a View Gene Set 0.005435 440 0.0151 199 microRNA targets for hsa-miR-130a from mirtarget2.targets www.mirbase.org...
Null hsa-miR-106b View Gene Set 0.005478 736 0.01515 200 microRNA targets for hsa-miR-106b from mirtarget2.targets www.mirbase.org...

Gene Set Collection: pictar.targets

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null hsa-miR-320 View Gene Set 9.662e-06 405 0.00172 1 microRNA targets for hsa-miR-320 from pictar.targets www.mirbase.org...
Null hsa-miR-15a View Gene Set 4.972e-05 618 0.00214 2 microRNA targets for hsa-miR-15a from pictar.targets www.mirbase.org...
Null hsa-miR-15b View Gene Set 7.213e-05 626 0.00214 2 microRNA targets for hsa-miR-15b from pictar.targets www.mirbase.org...
Null hsa-miR-195 View Gene Set 7.182e-05 620 0.00214 2 microRNA targets for hsa-miR-195 from pictar.targets www.mirbase.org...
Null hsa-miR-200b View Gene Set 3.996e-05 465 0.00214 2 microRNA targets for hsa-miR-200b from pictar.targets www.mirbase.org...
Null hsa-miR-200c View Gene Set 3.996e-05 465 0.00214 2 microRNA targets for hsa-miR-200c from pictar.targets www.mirbase.org...
Null hsa-miR-16 View Gene Set 9.016e-05 610 0.002293 7 microRNA targets for hsa-miR-16 from pictar.targets www.mirbase.org...
Null hsa-miR-124a View Gene Set 0.0002477 624 0.005286 8 microRNA targets for hsa-miR-124a from pictar.targets www.mirbase.org...
Null hsa-miR-26b View Gene Set 0.0002673 508 0.005286 8 microRNA targets for hsa-miR-26b from pictar.targets www.mirbase.org...
Null hsa-miR-26a View Gene Set 0.0003382 501 0.00602 10 microRNA targets for hsa-miR-26a from pictar.targets www.mirbase.org...
Null hsa-miR-141 View Gene Set 0.0004079 332 0.006601 11 microRNA targets for hsa-miR-141 from pictar.targets www.mirbase.org...
Null hsa-miR-21 View Gene Set 0.0005531 146 0.007032 12 microRNA targets for hsa-miR-21 from pictar.targets www.mirbase.org...
Null hsa-miR-23a View Gene Set 0.0005359 418 0.007032 12 microRNA targets for hsa-miR-23a from pictar.targets www.mirbase.org...
Null hsa-miR-23b View Gene Set 0.0005334 420 0.007032 12 microRNA targets for hsa-miR-23b from pictar.targets www.mirbase.org...
Null hsa-miR-323 View Gene Set 0.000607 248 0.007203 15 microRNA targets for hsa-miR-323 from pictar.targets www.mirbase.org...
Null hsa-miR-96 View Gene Set 0.001078 595 0.012 16 microRNA targets for hsa-miR-96 from pictar.targets www.mirbase.org...
Null hsa-miR-9* View Gene Set 0.001211 306 0.01268 17 microRNA targets for hsa-miR-9* from pictar.targets www.mirbase.org...
Null hsa-miR-103 View Gene Set 0.001542 606 0.01525 18 microRNA targets for hsa-miR-103 from pictar.targets www.mirbase.org...
Null hsa-miR-107 View Gene Set 0.001979 613 0.01854 19 microRNA targets for hsa-miR-107 from pictar.targets www.mirbase.org...
Null hsa-miR-330 View Gene Set 0.002803 352 0.02495 20 microRNA targets for hsa-miR-330 from pictar.targets www.mirbase.org...
Null hsa-miR-30a-3p View Gene Set 0.003109 230 0.02635 21 microRNA targets for hsa-miR-30a-3p from pictar.targets www.mirbase.org...
Null hsa-miR-182 View Gene Set 0.004533 552 0.03508 22 microRNA targets for hsa-miR-182 from pictar.targets www.mirbase.org...
Null hsa-miR-302b* View Gene Set 0.004393 253 0.03508 22 microRNA targets for hsa-miR-302b* from pictar.targets www.mirbase.org...
Null hsa-miR-375 View Gene Set 0.004962 166 0.03533 24 microRNA targets for hsa-miR-375 from pictar.targets www.mirbase.org...
Null hsa-miR-7 View Gene Set 0.004836 268 0.03533 24 microRNA targets for hsa-miR-7 from pictar.targets www.mirbase.org...
Null hsa-miR-216 View Gene Set 0.005563 121 0.03808 26 microRNA targets for hsa-miR-216 from pictar.targets www.mirbase.org...
Null hsa-miR-144 View Gene Set 0.005827 431 0.03841 27 microRNA targets for hsa-miR-144 from pictar.targets www.mirbase.org...
Null hsa-miR-153 View Gene Set 0.006383 376 0.03957 28 microRNA targets for hsa-miR-153 from pictar.targets www.mirbase.org...
Null hsa-miR-30e-3p View Gene Set 0.006446 230 0.03957 28 microRNA targets for hsa-miR-30e-3p from pictar.targets www.mirbase.org...

Gene Set Collection: tarbase.targets

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null hsa-miR-124 View Gene Set 0.0001134 133 0.005782 1 microRNA targets for hsa-miR-124 from tarbase.targets www.mirbase.org...
Null hsa-miR-30 View Gene Set 0.0003638 83 0.009276 2 microRNA targets for hsa-miR-30 from tarbase.targets www.mirbase.org...
Null hsa-let-7b View Gene Set 0.001065 83 0.01086 3 microRNA targets for hsa-let-7b from tarbase.targets www.mirbase.org...
Null hsa-miR-16 View Gene Set 0.0008778 91 0.01086 3 microRNA targets for hsa-miR-16 from tarbase.targets www.mirbase.org...
Null hsa-miR-373 View Gene Set 0.000725 40 0.01086 3 microRNA targets for hsa-miR-373 from tarbase.targets www.mirbase.org...
Null hsa-miR-155 View Gene Set 0.00165 95 0.01403 6 microRNA targets for hsa-miR-155 from tarbase.targets www.mirbase.org...

Gene Set Collection: targetscan.targets

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null hsa-miR-590-3p View Gene Set 1.505e-06 796 0.0003671 1 microRNA targets for hsa-miR-590-3p from targetscan.targets www.mirbase.org...
Null hsa-miR-124 View Gene Set 8.434e-06 1299 0.0006859 2 microRNA targets for hsa-miR-124 from targetscan.targets www.mirbase.org...
Null hsa-miR-506 View Gene Set 8.434e-06 1299 0.0006859 2 microRNA targets for hsa-miR-506 from targetscan.targets www.mirbase.org...
Null hsa-miR-1297 View Gene Set 3.213e-05 646 0.0009006 4 microRNA targets for hsa-miR-1297 from targetscan.targets www.mirbase.org...
Null hsa-miR-181a View Gene Set 5.167e-05 893 0.0009006 4 microRNA targets for hsa-miR-181a from targetscan.targets www.mirbase.org...
Null hsa-miR-181b View Gene Set 5.167e-05 893 0.0009006 4 microRNA targets for hsa-miR-181b from targetscan.targets www.mirbase.org...
Null hsa-miR-181c View Gene Set 5.167e-05 893 0.0009006 4 microRNA targets for hsa-miR-181c from targetscan.targets www.mirbase.org...
Null hsa-miR-181d View Gene Set 5.167e-05 893 0.0009006 4 microRNA targets for hsa-miR-181d from targetscan.targets www.mirbase.org...
Null hsa-miR-26a View Gene Set 3.213e-05 646 0.0009006 4 microRNA targets for hsa-miR-26a from targetscan.targets www.mirbase.org...
Null hsa-miR-26b View Gene Set 3.213e-05 646 0.0009006 4 microRNA targets for hsa-miR-26b from targetscan.targets www.mirbase.org...
Null hsa-miR-320a View Gene Set 4.781e-05 539 0.0009006 4 microRNA targets for hsa-miR-320a from targetscan.targets www.mirbase.org...
Null hsa-miR-320b View Gene Set 4.781e-05 539 0.0009006 4 microRNA targets for hsa-miR-320b from targetscan.targets www.mirbase.org...
Null hsa-miR-320c View Gene Set 4.781e-05 539 0.0009006 4 microRNA targets for hsa-miR-320c from targetscan.targets www.mirbase.org...
Null hsa-miR-320d View Gene Set 4.781e-05 539 0.0009006 4 microRNA targets for hsa-miR-320d from targetscan.targets www.mirbase.org...
Null hsa-miR-421 View Gene Set 0.0001364 271 0.002218 15 microRNA targets for hsa-miR-421 from targetscan.targets www.mirbase.org...
Null hsa-miR-21 View Gene Set 0.0003976 209 0.005706 16 microRNA targets for hsa-miR-21 from targetscan.targets www.mirbase.org...
Null hsa-miR-590-5p View Gene Set 0.0003976 209 0.005706 16 microRNA targets for hsa-miR-590-5p from targetscan.targets www.mirbase.org...
Null hsa-miR-1 View Gene Set 0.0005196 583 0.006037 18 microRNA targets for hsa-miR-1 from targetscan.targets www.mirbase.org...
Null hsa-miR-206 View Gene Set 0.0005196 583 0.006037 18 microRNA targets for hsa-miR-206 from targetscan.targets www.mirbase.org...
Null hsa-miR-340 View Gene Set 0.0004652 963 0.006037 18 microRNA targets for hsa-miR-340 from targetscan.targets www.mirbase.org...
Null hsa-miR-613 View Gene Set 0.0005196 583 0.006037 18 microRNA targets for hsa-miR-613 from targetscan.targets www.mirbase.org...
Null hsa-miR-539 View Gene Set 0.001195 433 0.01325 22 microRNA targets for hsa-miR-539 from targetscan.targets www.mirbase.org...
Null hsa-miR-216a View Gene Set 0.001552 161 0.01646 23 microRNA targets for hsa-miR-216a from targetscan.targets www.mirbase.org...
Null hsa-miR-543 View Gene Set 0.002053 497 0.02088 24 microRNA targets for hsa-miR-543 from targetscan.targets www.mirbase.org...
Null hsa-miR-144 View Gene Set 0.002346 647 0.02289 25 microRNA targets for hsa-miR-144 from targetscan.targets www.mirbase.org...
Null hsa-miR-140-5p View Gene Set 0.003053 251 0.02865 26 microRNA targets for hsa-miR-140-5p from targetscan.targets www.mirbase.org...
Null hsa-miR-15a View Gene Set 0.003871 965 0.02886 27 microRNA targets for hsa-miR-15a from targetscan.targets www.mirbase.org...
Null hsa-miR-15b View Gene Set 0.003871 965 0.02886 27 microRNA targets for hsa-miR-15b from targetscan.targets www.mirbase.org...
Null hsa-miR-16 View Gene Set 0.003871 965 0.02886 27 microRNA targets for hsa-miR-16 from targetscan.targets www.mirbase.org...
Null hsa-miR-195 View Gene Set 0.003871 965 0.02886 27 microRNA targets for hsa-miR-195 from targetscan.targets www.mirbase.org...
Null hsa-miR-203 View Gene Set 0.003903 558 0.02886 27 microRNA targets for hsa-miR-203 from targetscan.targets www.mirbase.org...
Null hsa-miR-424 View Gene Set 0.003871 965 0.02886 27 microRNA targets for hsa-miR-424 from targetscan.targets www.mirbase.org...
Null hsa-miR-497 View Gene Set 0.003871 965 0.02886 27 microRNA targets for hsa-miR-497 from targetscan.targets www.mirbase.org...
Null hsa-miR-219-5p View Gene Set 0.004273 273 0.03012 34 microRNA targets for hsa-miR-219-5p from targetscan.targets www.mirbase.org...
Null hsa-miR-23a View Gene Set 0.004444 838 0.03012 34 microRNA targets for hsa-miR-23a from targetscan.targets www.mirbase.org...
Null hsa-miR-23b View Gene Set 0.004444 838 0.03012 34 microRNA targets for hsa-miR-23b from targetscan.targets www.mirbase.org...
Null hsa-miR-130a View Gene Set 0.005942 722 0.03222 37 microRNA targets for hsa-miR-130a from targetscan.targets www.mirbase.org...
Null hsa-miR-130b View Gene Set 0.005942 722 0.03222 37 microRNA targets for hsa-miR-130b from targetscan.targets www.mirbase.org...
Null hsa-miR-300 View Gene Set 0.005775 638 0.03222 37 microRNA targets for hsa-miR-300 from targetscan.targets www.mirbase.org...
Null hsa-miR-301a View Gene Set 0.005942 722 0.03222 37 microRNA targets for hsa-miR-301a from targetscan.targets www.mirbase.org...
Null hsa-miR-301b View Gene Set 0.005942 722 0.03222 37 microRNA targets for hsa-miR-301b from targetscan.targets www.mirbase.org...
Null hsa-miR-378 View Gene Set 0.005874 106 0.03222 37 microRNA targets for hsa-miR-378 from targetscan.targets www.mirbase.org...
Null hsa-miR-381 View Gene Set 0.005775 638 0.03222 37 microRNA targets for hsa-miR-381 from targetscan.targets www.mirbase.org...
Null hsa-miR-422a View Gene Set 0.005874 106 0.03222 37 microRNA targets for hsa-miR-422a from targetscan.targets www.mirbase.org...
Null hsa-miR-454 View Gene Set 0.005942 722 0.03222 37 microRNA targets for hsa-miR-454 from targetscan.targets www.mirbase.org...
Null hsa-miR-142-3p View Gene Set 0.006371 250 0.0325 46 microRNA targets for hsa-miR-142-3p from targetscan.targets www.mirbase.org...
Null hsa-miR-182 View Gene Set 0.006194 841 0.0325 46 microRNA targets for hsa-miR-182 from targetscan.targets www.mirbase.org...
Null hsa-miR-199a-5p View Gene Set 0.006527 375 0.0325 46 microRNA targets for hsa-miR-199a-5p from targetscan.targets www.mirbase.org...
Null hsa-miR-199b-5p View Gene Set 0.006527 375 0.0325 46 microRNA targets for hsa-miR-199b-5p from targetscan.targets www.mirbase.org...
Null hsa-miR-137 View Gene Set 0.008361 857 0.0408 50 microRNA targets for hsa-miR-137 from targetscan.targets www.mirbase.org...
Null hsa-miR-1271 View Gene Set 0.008813 787 0.04136 51 microRNA targets for hsa-miR-1271 from targetscan.targets www.mirbase.org...
Null hsa-miR-96 View Gene Set 0.008813 787 0.04136 51 microRNA targets for hsa-miR-96 from targetscan.targets www.mirbase.org...

Gene Set Collection: miRNAtargetIntersection

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-200b View Gene Set 2.058e-06 202 0.002114 1 microRNA targets for miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-200b from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-200c View Gene Set 1.319e-06 197 0.002114 1 microRNA targets for miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-200c from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-590-3p View Gene Set 3.309e-06 406 0.002266 3 microRNA targets for miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-590-3p from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-590-3p View Gene Set 5.159e-06 181 0.002649 4 microRNA targets for miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-590-3p from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-548d-3p View Gene Set 1.555e-05 155 0.006386 5 microRNA targets for miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-548d-3p from miRNAtargetIntersection www.mirbase.org...
Null miranda.pictar.targetscan.targetsIntersection.hsa-miR-21 View Gene Set 2.342e-05 57 0.008016 6 microRNA targets for miranda.pictar.targetscan.targetsIntersection.hsa-miR-21 from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-548a-3p View Gene Set 5.353e-05 107 0.01266 7 microRNA targets for miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-548a-3p from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-15a View Gene Set 5.549e-05 202 0.01266 7 microRNA targets for miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-15a from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-15b View Gene Set 4.901e-05 201 0.01266 7 microRNA targets for miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-15b from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-582-3p View Gene Set 9.5e-05 44 0.01855 10 microRNA targets for miranda.mirbase.mirtarget2.targetsIntersection.hsa-miR-582-3p from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-144 View Gene Set 9.934e-05 238 0.01855 10 microRNA targets for miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-144 from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirbase.pictar.targetsIntersection.hsa-miR-16 View Gene Set 0.0001338 100 0.02291 12 microRNA targets for miranda.mirbase.pictar.targetsIntersection.hsa-miR-16 from miRNAtargetIntersection www.mirbase.org...
Null miranda.pictar.targetscan.targetsIntersection.hsa-miR-16 View Gene Set 0.0001545 351 0.02442 13 microRNA targets for miranda.pictar.targetscan.targetsIntersection.hsa-miR-16 from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-16 View Gene Set 0.0002388 185 0.03419 14 microRNA targets for miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-16 from miRNAtargetIntersection www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-195 View Gene Set 0.0002664 182 0.03419 14 microRNA targets for miranda.mirtarget2.pictar.targetsIntersection.hsa-miR-195 from miRNAtargetIntersection www.mirbase.org...
Null miranda.pictar.targetscan.targetsIntersection.hsa-miR-15b View Gene Set 0.000255 351 0.03419 14 microRNA targets for miranda.pictar.targetscan.targetsIntersection.hsa-miR-15b from miRNAtargetIntersection www.mirbase.org...
Null miranda.pictar.targetscan.targetsIntersection.hsa-miR-15a View Gene Set 0.0003296 351 0.03982 17 microRNA targets for miranda.pictar.targetscan.targetsIntersection.hsa-miR-15a from miRNAtargetIntersection www.mirbase.org...

Gene Set Collection: miRNAtargetUnion

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxDOWN, ranks.only=TRUE, absolute=FALSE, alternative=down

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-590-3p View Gene Set 3.828e-35 4554 4.429e-32 1 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-590-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-590-3p View Gene Set 3.345e-35 4420 4.429e-32 1 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-590-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-590-3p View Gene Set 2.664e-30 4159 2.055e-27 3 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-590-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-548c-3p View Gene Set 1.845e-29 4092 1.067e-26 4 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-548c-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-548b-5p View Gene Set 1.028e-25 3963 4.756e-23 5 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-548b-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-548a-5p View Gene Set 1.699e-25 3746 5.617e-23 6 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-548a-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-561 View Gene Set 1.641e-25 3650 5.617e-23 6 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-561 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-548d-5p View Gene Set 9.748e-25 4039 2.82e-22 8 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-548d-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-548a-3p View Gene Set 3.866e-23 3211 9.939e-21 9 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-548a-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-548c-5p View Gene Set 2.056e-21 3706 4.758e-19 10 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-548c-5p from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-590-3p View Gene Set 3.746e-21 2774 7.881e-19 11 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-590-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-559 View Gene Set 5.631e-20 3456 1.086e-17 12 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-559 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-495 View Gene Set 1.924e-19 2691 3.425e-17 13 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-495 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-548d-3p View Gene Set 2.253e-19 3139 3.723e-17 14 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-548d-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-429 View Gene Set 1.695e-18 2506 2.616e-16 15 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-429 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-200c View Gene Set 1.032e-17 2480 1.492e-15 16 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-200c from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-144 View Gene Set 4.271e-17 2413 5.54e-15 17 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-144 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-144 View Gene Set 4.309e-17 1553 5.54e-15 17 microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-144 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-142-5p View Gene Set 8.785e-17 2931 1.07e-14 19 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-142-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-186 View Gene Set 2.534e-16 3330 2.792e-14 20 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-186 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-200c View Gene Set 2.462e-16 2410 2.792e-14 20 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-200c from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-200b View Gene Set 3.732e-16 2444 3.925e-14 22 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-200b from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-374a View Gene Set 4.166e-16 2500 4.191e-14 23 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-374a from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.tarbase.targetsUnion.hsa-miR-200c View Gene Set 4.983e-16 2316 4.804e-14 24 microRNA targets for miranda.mirbase.tarbase.targetsUnion.hsa-miR-200c from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-607 View Gene Set 6.419e-16 3059 5.942e-14 25 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-607 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-200b View Gene Set 9.325e-16 2373 8.299e-14 26 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-200b from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-374b View Gene Set 1.037e-15 2404 8.889e-14 27 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-374b from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-338-5p View Gene Set 1.505e-15 2455 1.244e-13 28 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-338-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-524-5p View Gene Set 2.082e-15 3213 1.661e-13 29 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-524-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-369-3p View Gene Set 3.227e-15 2149 2.467e-13 30 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-369-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.tarbase.targetsUnion.hsa-miR-200c View Gene Set 3.305e-15 2013 2.467e-13 30 microRNA targets for miranda.mirtarget2.tarbase.targetsUnion.hsa-miR-200c from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-144 View Gene Set 5.381e-15 1652 3.891e-13 32 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-144 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-495 View Gene Set 6.019e-15 2518 4.221e-13 33 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-495 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-570 View Gene Set 6.781e-15 3769 4.615e-13 34 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-570 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-144 View Gene Set 8.305e-15 2426 5.491e-13 35 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-144 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-200c View Gene Set 9.017e-15 2095 5.796e-13 36 microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-200c from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-374a View Gene Set 1.791e-14 2329 1.12e-12 37 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-374a from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-495 View Gene Set 2.135e-14 2495 1.3e-12 38 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-495 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-144 View Gene Set 2.46e-14 2497 1.46e-12 39 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-144 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-374a View Gene Set 3.494e-14 2340 2.021e-12 40 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-374a from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-340 View Gene Set 3.756e-14 3099 2.074e-12 41 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-340 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-577 View Gene Set 3.765e-14 3197 2.074e-12 41 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-577 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-656 View Gene Set 7.782e-14 2395 4.122e-12 43 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-656 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-142-5p View Gene Set 7.838e-14 2649 4.122e-12 43 microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-142-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-200b View Gene Set 8.611e-14 2083 4.428e-12 45 microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-200b from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-522 View Gene Set 1.138e-13 2524 5.724e-12 46 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-522 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-568 View Gene Set 1.228e-13 2599 6.044e-12 47 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-568 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-369-3p View Gene Set 1.258e-13 2089 6.067e-12 48 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-369-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-186 View Gene Set 1.327e-13 3195 6.268e-12 49 microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-186 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-944 View Gene Set 1.409e-13 3201 6.517e-12 50 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-944 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-374b View Gene Set 1.436e-13 2245 6.517e-12 50 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-374b from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-142-5p View Gene Set 1.526e-13 2782 6.793e-12 52 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-142-5p from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.tarbase.targetsUnion.hsa-miR-200c View Gene Set 1.948e-13 1377 8.507e-12 53 microRNA targets for mirbase.mirtarget2.tarbase.targetsUnion.hsa-miR-200c from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-580 View Gene Set 2.025e-13 2702 8.678e-12 54 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-580 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-520d-5p View Gene Set 4.775e-13 2818 2.009e-11 55 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-520d-5p from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-200c View Gene Set 7.533e-13 1568 3.113e-11 56 microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-200c from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-203 View Gene Set 8.098e-13 2930 3.287e-11 57 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-203 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-181d View Gene Set 8.802e-13 2931 3.511e-11 58 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-181d from miRNAtargetUnion www.mirbase.org...
Null miranda.pictar.tarbase.targetsUnion.hsa-miR-200c View Gene Set 8.953e-13 1905 3.511e-11 58 microRNA targets for miranda.pictar.tarbase.targetsUnion.hsa-miR-200c from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-340 View Gene Set 9.699e-13 3195 3.741e-11 60 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-340 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-186 View Gene Set 1.063e-12 3166 4.032e-11 61 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-186 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-374b View Gene Set 1.136e-12 2203 4.239e-11 62 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-374b from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-340 View Gene Set 1.303e-12 1956 4.786e-11 63 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-340 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-582-5p View Gene Set 1.772e-12 2568 6.407e-11 64 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-582-5p from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-200b View Gene Set 2.12e-12 1545 7.549e-11 65 microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-200b from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-454 View Gene Set 2.167e-12 2596 7.597e-11 66 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-454 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-495 View Gene Set 2.215e-12 2114 7.651e-11 67 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-495 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-340 View Gene Set 3.008e-12 2801 1.024e-10 68 microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-340 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-340 View Gene Set 3.158e-12 3291 1.044e-10 69 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-340 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-181b View Gene Set 3.152e-12 2603 1.044e-10 69 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-181b from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-181d View Gene Set 3.262e-12 2688 1.063e-10 71 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-181d from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-144 View Gene Set 3.563e-12 2124 1.145e-10 72 microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-144 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-410 View Gene Set 4.499e-12 1731 1.426e-10 73 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-410 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-454 View Gene Set 4.741e-12 2494 1.483e-10 74 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-454 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-340 View Gene Set 5.001e-12 1341 1.543e-10 75 microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-340 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-186 View Gene Set 5.413e-12 3176 1.648e-10 76 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-186 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-186 View Gene Set 6.867e-12 1788 2.064e-10 77 microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-186 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-194 View Gene Set 8.968e-12 1752 2.661e-10 78 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-194 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-374b View Gene Set 9.364e-12 1555 2.743e-10 79 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-374b from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-369-3p View Gene Set 1.013e-11 1872 2.931e-10 80 microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-369-3p from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-203 View Gene Set 1.149e-11 1581 3.281e-10 81 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-203 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-340 View Gene Set 1.172e-11 2858 3.306e-10 82 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-340 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-141 View Gene Set 1.244e-11 2432 3.469e-10 83 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-141 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-203 View Gene Set 1.285e-11 2751 3.539e-10 84 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-203 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-181b View Gene Set 1.691e-11 2876 4.604e-10 85 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-181b from miRNAtargetUnion www.mirbase.org...
Null