Results

Click on the heading for any column to sort by that column.
JumpToCollection
Go to: Gene Set Collection: KEGG
Go to: Gene Set Collection: GO
Go to: Gene Set Collection: Broad.c1.CYTOBAND
Go to: Gene Set Collection: Broad.c2.CGP
Go to: Gene Set Collection: Broad.c2.CP.KEGG
Go to: Gene Set Collection: Broad.c2.CP.REACTOME
Go to: Gene Set Collection: Broad.c3.TFT
Go to: Gene Set Collection: Broad.c4.CGN
Go to: Gene Set Collection: Broad.c4.CM
Go to: Gene Set Collection: Broad.c5.BP
Go to: Gene Set Collection: Broad.c5.CC
Go to: Gene Set Collection: Broad.c5.MF
Go to: Gene Set Collection: PMID
Go to: Gene Set Collection: Prosite
Go to: Gene Set Collection: Enzyme
Go to: Gene Set Collection: miranda.targets
Go to: Gene Set Collection: mirbase.targets
Go to: Gene Set Collection: miRNAtargetUnion
Go to: Gene Set Collection: hprdBatch.DOWN
Go to: Gene Set Collection: hprdManual.UP
Go to: Gene Set Collection: hprdManual.DIFFERENT
Go to: Gene Set Collection: tfbsK3Z3

AFA results for: CG1521vsControl

Click on the heading for any column to sort by that column.

Gene Set Collection: KEGG

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
KEGG 00053 View Gene Set 1.132e-07 26 2.423e-05 1 Ascorbate and aldarate metabolism www.genome.jp/d...
KEGG 00980 View Gene Set 4.365e-07 71 4.67e-05 2 Metabolism of xenobiotics by cytochrome P450 www.genome.jp/d...
KEGG 00040 View Gene Set 1.329e-06 29 9.481e-05 3 Pentose and glucuronate interconversions www.genome.jp/d...
KEGG 00140 View Gene Set 6.129e-06 56 0.0002228 4 Steroid hormone biosynthesis www.genome.jp/d...
KEGG 00500 View Gene Set 6.247e-06 53 0.0002228 4 Starch and sucrose metabolism www.genome.jp/d...
KEGG 00982 View Gene Set 5.647e-06 73 0.0002228 4 Drug metabolism - cytochrome P450 www.genome.jp/d...
KEGG 04742 View Gene Set 1.93e-05 52 0.0005901 7 Taste transduction www.genome.jp/d...
KEGG 05320 View Gene Set 8.244e-05 54 0.002205 8 Autoimmune thyroid disease www.genome.jp/d...
KEGG 00860 View Gene Set 9.62e-05 43 0.002287 9 Porphyrin and chlorophyll metabolism www.genome.jp/d...
KEGG 05332 View Gene Set 0.0001573 43 0.003366 10 Graft-versus-host disease www.genome.jp/d...
KEGG 04060 View Gene Set 0.0002064 266 0.0037 11 Cytokine-cytokine receptor interaction www.genome.jp/d...
KEGG 05330 View Gene Set 0.0002075 39 0.0037 11 Allograft rejection www.genome.jp/d...
KEGG 04940 View Gene Set 0.0002751 45 0.004529 13 Type I diabetes mellitus www.genome.jp/d...
KEGG 04512 View Gene Set 0.0006631 84 0.01014 14 ECM-receptor interaction www.genome.jp/d...
KEGG 00603 View Gene Set 0.0007557 14 0.01078 15 Glycosphingolipid biosynthesis - globo series www.genome.jp/d...
KEGG 00591 View Gene Set 0.0008245 29 0.01103 16 Linoleic acid metabolism www.genome.jp/d...
KEGG 04080 View Gene Set 0.0009479 272 0.01193 17 Neuroactive ligand-receptor interaction www.genome.jp/d...
KEGG 00983 View Gene Set 0.001307 52 0.01554 18 Drug metabolism - other enzymes www.genome.jp/d...
KEGG 04610 View Gene Set 0.002288 69 0.02448 19 Complement and coagulation cascades www.genome.jp/d...
KEGG 04740 View Gene Set 0.002176 388 0.02448 19 Olfactory transduction www.genome.jp/d...

Gene Set Collection: GO

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
GO GO:0005576 View Gene Set 3.866e-33 2036 5.166e-29 1 extracellular region amigo.geneontol...
GO GO:0044421 View Gene Set 5.103e-21 1001 3.409e-17 2 extracellular region part amigo.geneontol...
GO GO:0032501 View Gene Set 1.366e-17 4631 6.083e-14 3 multicellular organismal process amigo.geneontol...
GO GO:0005886 View Gene Set 2.472e-17 3759 8.257e-14 4 plasma membrane amigo.geneontol...
GO GO:0031012 View Gene Set 5.941e-16 371 1.587e-12 5 extracellular matrix amigo.geneontol...
GO GO:0031224 View Gene Set 1.316e-14 5387 2.93e-11 6 intrinsic to membrane amigo.geneontol...
GO GO:0005578 View Gene Set 2.404e-13 313 4.589e-10 7 proteinaceous extracellular matrix amigo.geneontol...
GO GO:0016021 View Gene Set 4.022e-13 5278 6.718e-10 8 integral to membrane amigo.geneontol...
GO GO:0005615 View Gene Set 5.331e-13 752 7.914e-10 9 extracellular space amigo.geneontol...
GO GO:0044425 View Gene Set 1.198e-12 6145 1.6e-09 10 membrane part amigo.geneontol...
GO GO:0003008 View Gene Set 4.098e-12 1632 4.977e-09 11 system process amigo.geneontol...
GO GO:0016020 View Gene Set 5.755e-12 7286 6.407e-09 12 membrane amigo.geneontol...
GO GO:0044459 View Gene Set 2.364e-11 2023 2.43e-08 13 plasma membrane part amigo.geneontol...
GO GO:0004871 View Gene Set 6.329e-11 2128 5.637e-08 14 signal transducer activity amigo.geneontol...
GO GO:0060089 View Gene Set 6.329e-11 2128 5.637e-08 14 molecular transducer activity amigo.geneontol...
GO GO:0004872 View Gene Set 2.704e-10 1688 2.258e-07 16 receptor activity amigo.geneontol...
GO GO:0007155 View Gene Set 1.036e-09 827 8.143e-07 17 cell adhesion amigo.geneontol...
GO GO:0022610 View Gene Set 1.125e-09 828 8.346e-07 18 biological adhesion amigo.geneontol...
GO GO:0050877 View Gene Set 2.989e-09 1272 2.102e-06 19 neurological system process amigo.geneontol...
GO GO:0005201 View Gene Set 5.511e-09 81 3.681e-06 20 extracellular matrix structural constituent amigo.geneontol...
GO GO:0004888 View Gene Set 6.65e-09 1275 4.23e-06 21 transmembrane receptor activity amigo.geneontol...
GO GO:0044420 View Gene Set 1.728e-08 112 1.049e-05 22 extracellular matrix part amigo.geneontol...
GO GO:0007267 View Gene Set 3.448e-08 720 2.003e-05 23 cell-cell signaling amigo.geneontol...
GO GO:0050896 View Gene Set 4.12e-08 3765 2.293e-05 24 response to stimulus amigo.geneontol...
GO GO:0007275 View Gene Set 1.349e-07 3067 7.208e-05 25 multicellular organismal development amigo.geneontol...
GO GO:0031226 View Gene Set 1.63e-07 1208 8.375e-05 26 intrinsic to plasma membrane amigo.geneontol...
GO GO:0032502 View Gene Set 1.773e-07 3351 8.771e-05 27 developmental process amigo.geneontol...
GO GO:0009611 View Gene Set 2.08e-07 621 9.923e-05 28 response to wounding amigo.geneontol...
GO GO:0015020 View Gene Set 2.272e-07 30 0.0001047 29 glucuronosyltransferase activity amigo.geneontol...
GO GO:0043062 View Gene Set 3.15e-07 174 0.0001403 30 extracellular structure organization amigo.geneontol...
GO GO:0048731 View Gene Set 3.836e-07 2544 0.0001553 31 system development amigo.geneontol...
GO GO:0005887 View Gene Set 3.67e-07 1186 0.0001553 31 integral to plasma membrane amigo.geneontol...
GO GO:0015267 View Gene Set 3.821e-07 409 0.0001553 31 channel activity amigo.geneontol...
GO GO:0048856 View Gene Set 4.243e-07 2763 0.0001667 34 anatomical structure development amigo.geneontol...
GO GO:0022803 View Gene Set 5.245e-07 410 0.0002002 35 passive transmembrane transporter activity amigo.geneontol...
GO GO:0006140 View Gene Set 8.429e-07 283 0.0003128 36 regulation of nucleotide metabolic process amigo.geneontol...
GO GO:0005581 View Gene Set 1.413e-06 35 0.0005101 37 collagen amigo.geneontol...
GO GO:0007610 View Gene Set 1.957e-06 492 0.000688 38 behavior amigo.geneontol...
GO GO:0007600 View Gene Set 2.111e-06 830 0.0007231 39 sensory perception amigo.geneontol...
GO GO:0006955 View Gene Set 3.021e-06 732 0.001009 40 immune response amigo.geneontol...
GO GO:0005509 View Gene Set 3.99e-06 626 0.0013 41 calcium ion binding amigo.geneontol...
GO GO:0030154 View Gene Set 4.353e-06 1834 0.001385 42 cell differentiation amigo.geneontol...
GO GO:0007626 View Gene Set 4.664e-06 300 0.001449 43 locomotory behavior amigo.geneontol...
GO GO:0007599 View Gene Set 5.529e-06 134 0.001641 44 hemostasis amigo.geneontol...
GO GO:0022838 View Gene Set 5.526e-06 393 0.001641 44 substrate-specific channel activity amigo.geneontol...
GO GO:0006805 View Gene Set 6.437e-06 34 0.001792 46 xenobiotic metabolic process amigo.geneontol...
GO GO:0071466 View Gene Set 6.437e-06 34 0.001792 46 cellular response to xenobiotic stimulus amigo.geneontol...
GO GO:0030246 View Gene Set 6.392e-06 367 0.001792 46 carbohydrate binding amigo.geneontol...
GO GO:0005102 View Gene Set 7.49e-06 928 0.002042 49 receptor binding amigo.geneontol...
GO GO:0005539 View Gene Set 7.732e-06 151 0.002066 50 glycosaminoglycan binding amigo.geneontol...
GO GO:0004930 View Gene Set 9.263e-06 855 0.002426 51 G-protein coupled receptor activity amigo.geneontol...
GO GO:0030054 View Gene Set 9.983e-06 539 0.002565 52 cell junction amigo.geneontol...
GO GO:0006952 View Gene Set 1.042e-05 717 0.002577 53 defense response amigo.geneontol...
GO GO:0005216 View Gene Set 1.04e-05 382 0.002577 53 ion channel activity amigo.geneontol...
GO GO:0007596 View Gene Set 1.337e-05 128 0.003143 55 blood coagulation amigo.geneontol...
GO GO:0009812 View Gene Set 1.341e-05 10 0.003143 55 flavonoid metabolic process amigo.geneontol...
GO GO:0048869 View Gene Set 1.306e-05 1883 0.003143 55 cellular developmental process amigo.geneontol...
GO GO:0001871 View Gene Set 1.489e-05 166 0.00337 58 pattern binding amigo.geneontol...
GO GO:0022836 View Gene Set 1.514e-05 309 0.00337 58 gated channel activity amigo.geneontol...
GO GO:0030247 View Gene Set 1.489e-05 166 0.00337 58 polysaccharide binding amigo.geneontol...
GO GO:0048705 View Gene Set 1.667e-05 123 0.003651 61 skeletal system morphogenesis amigo.geneontol...
GO GO:0007154 View Gene Set 1.936e-05 1687 0.004173 62 cell communication amigo.geneontol...
GO GO:0007166 View Gene Set 2.474e-05 1497 0.005165 63 cell surface receptor linked signaling pathway amigo.geneontol...
GO GO:0030198 View Gene Set 2.464e-05 103 0.005165 63 extracellular matrix organization amigo.geneontol...
GO GO:0006954 View Gene Set 2.634e-05 380 0.005331 65 inflammatory response amigo.geneontol...
GO GO:0009653 View Gene Set 2.599e-05 1301 0.005331 65 anatomical structure morphogenesis amigo.geneontol...
GO GO:0050878 View Gene Set 2.945e-05 205 0.005872 67 regulation of body fluid levels amigo.geneontol...
GO GO:0007186 View Gene Set 2.992e-05 543 0.005879 68 G-protein coupled receptor protein signaling pathway amigo.geneontol...
GO GO:0050817 View Gene Set 3.289e-05 131 0.006368 69 coagulation amigo.geneontol...
GO GO:0015075 View Gene Set 3.434e-05 715 0.006555 70 ion transmembrane transporter activity amigo.geneontol...
GO GO:0006811 View Gene Set 3.814e-05 829 0.007131 71 ion transport amigo.geneontol...
GO GO:0005604 View Gene Set 3.843e-05 73 0.007131 71 basement membrane amigo.geneontol...
GO GO:0008194 View Gene Set 4.034e-05 123 0.007382 73 UDP-glycosyltransferase activity amigo.geneontol...
GO GO:0009888 View Gene Set 4.218e-05 827 0.007616 74 tissue development amigo.geneontol...
GO GO:0005922 View Gene Set 4.342e-05 21 0.007734 75 connexon complex amigo.geneontol...
GO GO:0030001 View Gene Set 5.127e-05 496 0.009013 76 metal ion transport amigo.geneontol...
GO GO:0009410 View Gene Set 5.283e-05 38 0.009167 77 response to xenobiotic stimulus amigo.geneontol...
GO GO:0010872 View Gene Set 5.714e-05 8 0.009575 78 regulation of cholesterol esterification amigo.geneontol...
GO GO:0048513 View Gene Set 5.733e-05 1931 0.009575 78 organ development amigo.geneontol...
GO GO:0034702 View Gene Set 5.687e-05 210 0.009575 78 ion channel complex amigo.geneontol...
GO GO:0051552 View Gene Set 5.941e-05 5 0.0098 81 flavone metabolic process amigo.geneontol...
GO GO:0022857 View Gene Set 6.465e-05 905 0.01053 82 transmembrane transporter activity amigo.geneontol...
GO GO:0009605 View Gene Set 6.972e-05 666 0.01122 83 response to external stimulus amigo.geneontol...
GO GO:0033700 View Gene Set 7.538e-05 10 0.01185 84 phospholipid efflux amigo.geneontol...
GO GO:0044456 View Gene Set 7.461e-05 274 0.01185 84 synapse part amigo.geneontol...
GO GO:0042611 View Gene Set 7.871e-05 36 0.01223 86 MHC protein complex amigo.geneontol...
GO GO:0042060 View Gene Set 8.093e-05 223 0.01243 87 wound healing amigo.geneontol...
GO GO:0009698 View Gene Set 8.582e-05 12 0.01303 88 phenylpropanoid metabolic process amigo.geneontol...
GO GO:0008201 View Gene Set 8.964e-05 113 0.01346 89 heparin binding amigo.geneontol...
GO GO:0005125 View Gene Set 0.0001085 201 0.01611 90 cytokine activity amigo.geneontol...
GO GO:0023052 View Gene Set 0.0001186 3571 0.01739 91 signaling amigo.geneontol...
GO GO:0030195 View Gene Set 0.0001198 29 0.01739 91 negative regulation of blood coagulation amigo.geneontol...
GO GO:0045202 View Gene Set 0.0001237 371 0.01758 93 synapse amigo.geneontol...
GO GO:0005261 View Gene Set 0.0001229 271 0.01758 93 cation channel activity amigo.geneontol...
GO GO:0042612 View Gene Set 0.0001296 22 0.01823 95 MHC class I protein complex amigo.geneontol...
GO GO:0031589 View Gene Set 0.0001355 152 0.01867 96 cell-substrate adhesion amigo.geneontol...
GO GO:0005583 View Gene Set 0.0001347 11 0.01867 96 fibrillar collagen amigo.geneontol...
GO GO:0006812 View Gene Set 0.0001372 587 0.01871 98 cation transport amigo.geneontol...
GO GO:0033124 View Gene Set 0.0001583 141 0.02115 99 regulation of GTP catabolic process amigo.geneontol...
GO GO:0043087 View Gene Set 0.0001583 141 0.02115 99 regulation of GTPase activity amigo.geneontol...
GO GO:0051239 View Gene Set 0.0001614 1088 0.02127 101 regulation of multicellular organismal process amigo.geneontol...
GO GO:0009986 View Gene Set 0.0001624 350 0.02127 101 cell surface amigo.geneontol...
GO GO:0042742 View Gene Set 0.0001642 121 0.02129 103 defense response to bacterium amigo.geneontol...
GO GO:0032318 View Gene Set 0.0001762 124 0.02264 104 regulation of Ras GTPase activity amigo.geneontol...
GO GO:0002376 View Gene Set 0.0001784 1101 0.02269 105 immune system process amigo.geneontol...
GO GO:0010873 View Gene Set 0.0001939 7 0.02443 106 positive regulation of cholesterol esterification amigo.geneontol...
GO GO:0022843 View Gene Set 0.0001975 143 0.02466 107 voltage-gated cation channel activity amigo.geneontol...
GO GO:0007268 View Gene Set 0.0002092 362 0.02588 108 synaptic transmission amigo.geneontol...
GO GO:0034364 View Gene Set 0.0002193 24 0.02688 109 high-density lipoprotein particle amigo.geneontol...
GO GO:0008083 View Gene Set 0.0002233 161 0.02713 110 growth factor activity amigo.geneontol...
GO GO:0065008 View Gene Set 0.00023 1741 0.02769 111 regulation of biological quality amigo.geneontol...
GO GO:0006184 View Gene Set 0.0002342 143 0.02794 112 GTP catabolic process amigo.geneontol...
GO GO:0043691 View Gene Set 0.0002409 17 0.02823 113 reverse cholesterol transport amigo.geneontol...
GO GO:0046039 View Gene Set 0.0002395 153 0.02823 113 GTP metabolic process amigo.geneontol...
GO GO:0048663 View Gene Set 0.0002434 39 0.02827 115 neuron fate commitment amigo.geneontol...
GO GO:0019226 View Gene Set 0.0002501 421 0.0288 116 transmission of nerve impulse amigo.geneontol...
GO GO:0030811 View Gene Set 0.0002565 157 0.02904 117 regulation of nucleotide catabolic process amigo.geneontol...
GO GO:0033121 View Gene Set 0.0002565 157 0.02904 117 regulation of purine nucleotide catabolic process amigo.geneontol...
GO GO:0009261 View Gene Set 0.000303 156 0.03402 119 ribonucleotide catabolic process amigo.geneontol...
GO GO:0031225 View Gene Set 0.0003073 133 0.03422 120 anchored to membrane amigo.geneontol...
GO GO:0009154 View Gene Set 0.0003169 154 0.03499 121 purine ribonucleotide catabolic process amigo.geneontol...
GO GO:0030199 View Gene Set 0.0003228 27 0.03535 122 collagen fibril organization amigo.geneontol...
GO GO:0048878 View Gene Set 0.000331 563 0.03566 123 chemical homeostasis amigo.geneontol...
GO GO:0050819 View Gene Set 0.0003293 31 0.03566 123 negative regulation of coagulation amigo.geneontol...
GO GO:0005244 View Gene Set 0.0003446 190 0.03654 125 voltage-gated ion channel activity amigo.geneontol...
GO GO:0022832 View Gene Set 0.0003446 190 0.03654 125 voltage-gated channel activity amigo.geneontol...
GO GO:0030182 View Gene Set 0.0003652 546 0.03812 127 neuron differentiation amigo.geneontol...
GO GO:0061041 View Gene Set 0.0003638 44 0.03812 127 regulation of wound healing amigo.geneontol...
GO GO:0022891 View Gene Set 0.000369 823 0.03822 129 substrate-specific transmembrane transporter activity amigo.geneontol...
GO GO:0009203 View Gene Set 0.0003816 150 0.03836 130 ribonucleoside triphosphate catabolic process amigo.geneontol...
GO GO:0009207 View Gene Set 0.0003816 150 0.03836 130 purine ribonucleoside triphosphate catabolic process amigo.geneontol...
GO GO:0019882 View Gene Set 0.0003819 62 0.03836 130 antigen processing and presentation amigo.geneontol...
GO GO:0050900 View Gene Set 0.0003806 93 0.03836 130 leukocyte migration amigo.geneontol...
GO GO:0001569 View Gene Set 0.0004068 21 0.04056 134 patterning of blood vessels amigo.geneontol...
GO GO:0006163 View Gene Set 0.0004265 446 0.04221 135 purine nucleotide metabolic process amigo.geneontol...
GO GO:0034367 View Gene Set 0.0004481 22 0.04338 136 macromolecular complex remodeling amigo.geneontol...
GO GO:0034368 View Gene Set 0.0004481 22 0.04338 136 protein-lipid complex remodeling amigo.geneontol...
GO GO:0034369 View Gene Set 0.0004481 22 0.04338 136 plasma lipoprotein particle remodeling amigo.geneontol...
GO GO:0009146 View Gene Set 0.0005018 152 0.04788 139 purine nucleoside triphosphate catabolic process amigo.geneontol...
GO GO:0050909 View Gene Set 0.0004989 44 0.04788 139 sensory perception of taste amigo.geneontol...
GO GO:0006195 View Gene Set 0.0005117 183 0.04833 141 purine nucleotide catabolic process amigo.geneontol...
GO GO:0051336 View Gene Set 0.0005137 381 0.04833 141 regulation of hydrolase activity amigo.geneontol...
GO GO:0005083 View Gene Set 0.0005177 291 0.04836 143 small GTPase regulator activity amigo.geneontol...
GO GO:0004190 View Gene Set 0.0005267 19 0.04853 144 aspartic-type endopeptidase activity amigo.geneontol...
GO GO:0070001 View Gene Set 0.0005267 19 0.04853 144 aspartic-type peptidase activity amigo.geneontol...
GO GO:0055082 View Gene Set 0.0005382 411 0.04925 146 cellular chemical homeostasis amigo.geneontol...

Gene Set Collection: Broad.c1.CYTOBAND

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad chr2q37 View Gene Set 1.272e-05 143 0.004145 1 Genes in cytogenetic band chr2q37 www.broad.mit.e...

Gene Set Collection: Broad.c2.CGP

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad PODAR_RESPONSE_TO_ADAPHOSTIN_UP View Gene Set 2.654e-16 140 6.349e-13 1 Up-regulated genes in MM1.S cells (multiple myeloma) treated with adaphostin [PubChem=387042] a tyrosine kinase inhibitor with anticancer properties. www.broad.mit.e...
Broad BENPORATH_ES_WITH_H3K27ME3 View Gene Set 6.856e-16 1094 8.2e-13 2 Set 'H3K27 bound': genes posessing the trimethylated H3K27 (H3K27me3) mark in their promoters in human embryonic stem cells as identified by ChIP on chip. www.broad.mit.e...
Broad LIU_PROSTATE_CANCER_DN View Gene Set 2.546e-15 446 2.03e-12 3 Genes down-regulated in prostate cancer samples. www.broad.mit.e...
Broad CONCANNON_APOPTOSIS_BY_EPOXOMICIN_UP View Gene Set 2.613e-12 228 1.563e-09 4 Genes up-regulated in SH-SY5Y cells (neuroblastoma) after treatment with epoxomicin [PubChem=3035402] a protease inhibitor causing apoptosis. www.broad.mit.e...
Broad ELVIDGE_HYPOXIA_BY_DMOG_UP View Gene Set 3.422e-11 125 1.637e-08 5 Genes up-regulated in MCF7 cells (breast cancer) treated with hypoxia mimetic DMOG [PubChem=3080614]. www.broad.mit.e...
Broad SATO_SILENCED_BY_METHYLATION_IN_PANCREATIC_CANCER_1 View Gene Set 4.38e-10 407 1.746e-07 6 Genes up-regulated in the pancreatic cancer cell lines (AsPC1 Hs766T MiaPaCa2 Panc1) but not in the non-neoplastic cells (HPDE) by decitabine (5-aza-2'-deoxycytidine) [PubChem=451668]. www.broad.mit.e...
Broad DODD_NASOPHARYNGEAL_CARCINOMA_UP View Gene Set 6.729e-10 1582 2.299e-07 7 Genes up-regulated in nasopharyngeal carcinoma (NPC) compared to the normal tissue. www.broad.mit.e...
Broad ELVIDGE_HYPOXIA_UP View Gene Set 9.295e-10 163 2.779e-07 8 Genes up-regulated in MCF7 cells (breast cancer) under hypoxia conditions. www.broad.mit.e...
Broad BENPORATH_SUZ12_TARGETS View Gene Set 1.766e-09 1011 4.694e-07 9 Set 'Suz12 targets': genes identified by ChIP on chip as targets of the Polycomb protein SUZ12 [Gene ID=23512] in human embryonic stem cells. www.broad.mit.e...
Broad BENPORATH_PRC2_TARGETS View Gene Set 3.708e-09 636 8.869e-07 10 Set 'PRC2 targets': Polycomb Repression Complex 2 (PRC) targets; identified by ChIP on chip on human embryonic stem cells as genes that: posess the trimethylated H3K27 mark in their promoters and are bound by SUZ12 [Gene ID=23512] and EED [Gene ID=8726] Polycomb proteins. www.broad.mit.e...
Broad SMID_BREAST_CANCER_LUMINAL_B_DN View Gene Set 1.338e-08 549 2.909e-06 11 Genes down-regulated in the luminal B subtype of breast cancer. www.broad.mit.e...
Broad SMID_BREAST_CANCER_NORMAL_LIKE_UP View Gene Set 1.769e-08 459 3.527e-06 12 Genes up-regulated in the normal-like subtype of breast cancer. www.broad.mit.e...
Broad PEREZ_TP53_TARGETS View Gene Set 4.696e-08 1066 8.64e-06 13 Genes up-regulated in the HMEC cells (primary mammary epithelium) upon expression of TP53 [Gene ID=7157] off adenoviral vector. www.broad.mit.e...
Broad ODONNELL_TFRC_TARGETS_UP View Gene Set 1.223e-07 401 2.09e-05 14 Genes up-regulated in P493-6 cells (B lymphocyte) upon knockdown of TFRC [Gene ID=7037] by RNAi. www.broad.mit.e...
Broad MOHANKUMAR_TLX1_TARGETS_DN View Gene Set 1.94e-07 158 2.9e-05 15 Down-regulated in MCF7 cells (breast cancer) by TLX1 (HOX11) [Gene ID=3195]. www.broad.mit.e...
Broad NAKAYAMA_SOFT_TISSUE_TUMORS_PCA1_UP View Gene Set 1.842e-07 74 2.9e-05 15 Top 100 probe sets contrubuting to the positive side of the 1st principal component; predominantly associated with spindle cell and pleomorphic sarcoma samples. www.broad.mit.e...
Broad KINSEY_TARGETS_OF_EWSR1_FLII_FUSION_DN View Gene Set 2.568e-07 306 3.613e-05 17 Genes down-regulated in TC71 and EWS502 cells (Ewing's sarcoma) upon knockdown of the EWSR1-FLII fusion [Gene ID=2130 2314]. www.broad.mit.e...
Broad MANALO_HYPOXIA_UP View Gene Set 3.117e-07 197 4.142e-05 18 Genes up-regulated in response to both hypoxia and overexpression of an active form of HIF1A [Gene ID=3091]. www.broad.mit.e...
Broad MOREAUX_MULTIPLE_MYELOMA_BY_TACI_UP View Gene Set 5.068e-07 365 6.381e-05 19 Genes distinguishing in multiple myeloma (MM) samples with higher expression of TACI [Gene ID=23495]. www.broad.mit.e...
Broad GARCIA_TARGETS_OF_FLI1_AND_DAX1_UP View Gene Set 1.282e-06 44 0.0001524 20 Genes up-regulated in the A673 cells (Ewing sarcoma) after double knockdown of both FLI1 and DAX1 [Gene ID=2313 190] by RNAi. www.broad.mit.e...
Broad MCLACHLAN_DENTAL_CARIES_UP View Gene Set 1.338e-06 207 0.0001524 20 Genes up-regulated in pulpal tissue extracted from carious teeth. www.broad.mit.e...
Broad WALLACE_PROSTATE_CANCER_RACE_UP View Gene Set 1.429e-06 288 0.0001553 22 Genes up-regulated in prostate cancer samples from African-American patients compared to those from the European-American patients. www.broad.mit.e...
Broad ELVIDGE_HIF1A_AND_HIF2A_TARGETS_DN View Gene Set 1.637e-06 100 0.0001703 23 Genes down-regulated in MCF7 cells (breast cancer) after knockdown of both HIF1A and HIF2A [Gene ID=3091 2034] by RNAi. www.broad.mit.e...
Broad DELYS_THYROID_CANCER_UP View Gene Set 1.838e-06 397 0.0001832 24 Genes up-regulated in papillary thyroid carcinoma (PTC) compared to normal tissue. www.broad.mit.e...
Broad KERLEY_RESPONSE_TO_CISPLATIN_UP View Gene Set 1.974e-06 38 0.0001889 25 Genes genes up-regulated in NT2/D1 cells (embryonal carcinoma) in response to treatment with cisplatin [PubChem=2767]. www.broad.mit.e...
Broad PEREZ_TP63_TARGETS View Gene Set 3.491e-06 328 0.0003093 26 Genes up-regulated in the HMEC cells (primary mammary epithelium) upon expression of the transcriptionally active isoform of TP63 [Gene ID=8626] off adenoviral vector. www.broad.mit.e...
Broad SAGIV_CD24_TARGETS_DN View Gene Set 3.401e-06 45 0.0003093 26 Genes down-regulated in HT29 cells (colon cancer) after knockdown of CD24 [Gene ID=100133941] by both RNAi and monoclonal antibodies. www.broad.mit.e...
Broad KOBAYASHI_EGFR_SIGNALING_24HR_UP View Gene Set 3.765e-06 96 0.0003216 28 Genes up-regulated in H1975 cells (non-small cell lung cancer NSCLC) resistant to gefitinib [PubChem=123631] after treatment with EGFR inhibitor CL-387785 [PubChem=2776] for 24h. www.broad.mit.e...
Broad AMUNDSON_DNA_DAMAGE_RESPONSE_TP53 View Gene Set 4.342e-06 16 0.0003402 29 Genes discriminating TP53 [Gene ID=7157] status across various genotoxic stress agents. www.broad.mit.e...
Broad YAO_TEMPORAL_RESPONSE_TO_PROGESTERONE_CLUSTER_0 View Gene Set 4.409e-06 69 0.0003402 29 Genes co-regulated in uterus during a time course response to progesterone [PubChem=5994]: SOM cluster 0. www.broad.mit.e...
Broad LEONARD_HYPOXIA View Gene Set 4.37e-06 32 0.0003402 29 Genes up-regulated in HK-2 cells kidney tubular epithelium) under hypoxia and down-regulated on re-oxygenation. www.broad.mit.e...
Broad KRIGE_RESPONSE_TO_TOSEDOSTAT_24HR_UP View Gene Set 4.713e-06 716 0.0003523 32 Genes up-regulated in HL-60 cells (acute promyelocytic leukemia APL) after treatment with the aminopeptidase inhibitor tosedostat (CHR-2797) [PubChem=15547703] for 24 h. www.broad.mit.e...
Broad ELVIDGE_HIF1A_TARGETS_DN View Gene Set 5.066e-06 87 0.0003672 33 Genes down-regulated in MCF7 cells (breast cancer) after knockdown of HIF1A [Gene ID=3091] by RNAi. www.broad.mit.e...
Broad MENSE_HYPOXIA_UP View Gene Set 5.224e-06 94 0.0003675 34 Hypoxia response genes in both astrocytes and HeLa cell line. www.broad.mit.e...
Broad BENPORATH_EED_TARGETS View Gene Set 5.651e-06 1033 0.0003862 35 Set 'Eed targets': genes identified by ChIP on chip as targets of the Polycomb protein EED [Gene ID=8726] in human embryonic stem cells. www.broad.mit.e...
Broad SCHUETZ_BREAST_CANCER_DUCTAL_INVASIVE_UP View Gene Set 7.646e-06 339 0.000508 36 Genes up-regulated in invasive ductal carcinoma (IDC) relative to ductal carcinoma in situ (DCIS non-invasive). www.broad.mit.e...
Broad YAMASHITA_METHYLATED_IN_PROSTATE_CANCER View Gene Set 8.034e-06 57 0.0005194 37 Genes up-regulated in prostate cancer cell lines after treatment with 5-aza-2'-deoxycytidine (decitabine) [PubChem=451668]. www.broad.mit.e...
Broad MCLACHLAN_DENTAL_CARIES_DN View Gene Set 1.153e-05 234 0.0007256 38 Genes down-regulated in pulpal tissue extracted from carious teeth. www.broad.mit.e...
Broad HARRIS_HYPOXIA View Gene Set 1.306e-05 79 0.0008012 39 Genes known to be induced by hypoxia www.broad.mit.e...
Broad KRIGE_AMINO_ACID_DEPRIVATION View Gene Set 1.41e-05 26 0.0008433 40 The 'amino acid deprivation response' (AADR): genes up-regulated in HL-60 cells (acute promyelocytic leukemia APL) after amino acid deprivation or treatment with the aminopeptidase inhibitor tosedostat (CHR-2797) [PubChem=15547703]. www.broad.mit.e...
Broad HATADA_METHYLATED_IN_LUNG_CANCER_UP View Gene Set 1.727e-05 355 0.001007 41 Genes with hypermethylated DNA in lung cancer samples. www.broad.mit.e...
Broad MISHRA_CARCINOMA_ASSOCIATED_FIBROBLAST_UP View Gene Set 1.983e-05 22 0.001129 42 Top genes up-regulated in mesenchyme stem cells (MSC) grown in a tumor conditioned medium which leads to carcinoma-associated fibroblast phenotype. www.broad.mit.e...
Broad SHEN_SMARCA2_TARGETS_DN View Gene Set 2.155e-05 334 0.001199 43 Genes whose expression negatively correlated with that of SMARCA2 [Gene ID=6595] in prostate cancer samples. www.broad.mit.e...
Broad ONDER_CDH1_TARGETS_1_UP View Gene Set 2.242e-05 131 0.001219 44 Genes up-regulated in HMLE cells (mmortalized nontransformed mammary epithelial) by expression of a dominant-negative form of E-cadhedrin (CDH1) [Gene ID=999]. www.broad.mit.e...
Broad SMIRNOV_CIRCULATING_ENDOTHELIOCYTES_IN_CANCER_UP View Gene Set 2.985e-05 157 0.001587 45 Genes up-regulated in circulating endothelial cells (CEC) from cancer patients compared to those from healthy donors. www.broad.mit.e...
Broad KUMAMOTO_RESPONSE_TO_NUTLIN_3A_UP View Gene Set 3.331e-05 9 0.001732 46 Genes up-regulated in response to nutlin-3a [PubChem=216345] an inhibitor of MDM2 [Gene ID=4193] in skin fibroblast cultures after knockdown of TP53 [Gene ID=7157] by RNAi. www.broad.mit.e...
Broad SENESE_HDAC2_TARGETS_DN View Gene Set 3.787e-05 124 0.001927 47 Genes down-regulated in U2OS cells (osteosarcoma) upon knockdown of HDAC2 [Gene ID=3066] by RNAi. www.broad.mit.e...
Broad LIN_SILENCED_BY_TUMOR_MICROENVIRONMENT View Gene Set 6.025e-05 100 0.003002 48 Genes downregulated in MCF10A cells (breast cancer) co-cultured with cancer-associated fibroblasts (CAF). www.broad.mit.e...
Broad SCHAVOLT_TARGETS_OF_TP53_AND_TP63 View Gene Set 6.613e-05 16 0.003228 49 Genes up-regulated by TP53 [Gene ID=7157] and down-regulated by an isoform of TP63 [Gene ID=8626] in primary HEK cells (epidermal keratinocytes). www.broad.mit.e...
Broad INGA_TP53_TARGETS View Gene Set 6.963e-05 16 0.003331 50 Genes whose promoters contain TP53 [Gene ID=7157] response elements. www.broad.mit.e...
Broad NAGASHIMA_EGF_SIGNALING_UP View Gene Set 7.658e-05 57 0.003592 51 Genes up-regulated in MCF7 cells (breast cancer) after stimulation with EGF [Gene ID=1950]. www.broad.mit.e...
Broad JEON_SMAD6_TARGETS_UP View Gene Set 7.911e-05 23 0.003639 52 Genes up-regulated in H1299 cells (lung cancer) upon knockdown of SMAD6 [Gene ID=4091] by RNAi. www.broad.mit.e...
Broad BERENJENO_ROCK_SIGNALING_NOT_VIA_RHOA_UP View Gene Set 0.0001033 28 0.00466 53 Genes up-regulated in NIH3T3 cells (fibroblasts) after treatment with Y27632 [PubChem=123862] an inhibitor of ROCK proteins; the changes did not depend on expression of constitutively active (Q63L) form of RHOA [Gene ID=387]. www.broad.mit.e...
Broad GOZGIT_ESR1_TARGETS_DN View Gene Set 0.0001077 710 0.004771 54 Genes down-regulated in TMX2-28 cells (breast cancer) which do not express ESR1 [Gene ID=2099]) compared to the parental MCF7 cells which do. www.broad.mit.e...
Broad COLIN_PILOCYTIC_ASTROCYTOMA_VS_GLIOBLASTOMA_UP View Gene Set 0.0001113 34 0.00484 55 Genes up-regulated in pilocytic astrocytoma compared to glioblastoma samples. www.broad.mit.e...
Broad TARTE_PLASMA_CELL_VS_PLASMABLAST_UP View Gene Set 0.0001518 386 0.006484 56 Genes up-regulated in mature plasma cells compared with plasmablastic B lymphocytes. www.broad.mit.e...
Broad WANG_BARRETTS_ESOPHAGUS_AND_ESOPHAGUS_CANCER_DN View Gene Set 0.0001616 34 0.00678 57 Genes down-regulated in esophageal adenocarcinoma (EAC) and Barret's esophagus (BE) relative to normal esophagi. www.broad.mit.e...
Broad LEE_NEURAL_CREST_STEM_CELL_DN View Gene Set 0.0001988 114 0.008043 58 Genes down-regulated in the neural crest stem cells (NCS) defined as p75+/HNK1+ [Gene ID=4804 27087]. www.broad.mit.e...
Broad ACEVEDO_METHYLATED_IN_LIVER_CANCER_DN View Gene Set 0.0001977 882 0.008043 58 Genes whose DNA is hyper-methylated in hepatocellular carcinoma (HCC) compared to normal liver. www.broad.mit.e...
Broad ZHAN_MULTIPLE_MYELOMA_CD1_VS_CD2_UP View Gene Set 0.0002018 64 0.008043 58 Genes up-regulated in CD-1 compared to CD-2 cluster of multiple myeloma samples. www.broad.mit.e...
Broad JAEGER_METASTASIS_DN View Gene Set 0.0002104 252 0.008117 61 Genes down-regulated in metastases from malignant melanoma compared to the primary tumors. www.broad.mit.e...
Broad HELLER_SILENCED_BY_METHYLATION_UP View Gene Set 0.0002083 247 0.008117 61 Genes up-regulated in at least one of three multiple myeloma (MM) cell lines treated with the DNA hypomethylating agent decitabine (5-aza-2'-deoxycytidine) [PubChem=451668]. www.broad.mit.e...
Broad MAHADEVAN_RESPONSE_TO_MP470_DN View Gene Set 0.0002296 16 0.008719 63 Top genes up-regulated in the GIST (gastrointestinal stromal tumor) cell line sensitive to imatinib [PubChem=5291] after treatment with MP470 a protein kinase inhibitor. www.broad.mit.e...
Broad ADDYA_ERYTHROID_DIFFERENTIATION_BY_HEMIN View Gene Set 0.0002517 64 0.009406 64 Selected genes changed in K562 (immortalized erythroleukemia) cells induced by hemin [PubChem=26945] treatment to express erythroid properties. www.broad.mit.e...
Broad CHUANG_OXIDATIVE_STRESS_RESPONSE_UP View Gene Set 0.0002797 27 0.01029 65 Genes up-regulated in MCF7 cells (breast cancer) after treatment with the oxydants: hydrogen peroxyde menadione and t-butyl hydroperoxyde [PubChem=784 4055 6410]. www.broad.mit.e...
Broad CAIRO_HEPATOBLASTOMA_CLASSES_DN View Gene Set 0.0002884 205 0.01045 66 Genes down-regulated in robust Cluster 2 (rC2) of hepatoblastoma samples compared to those in the robust Cluster 1 (rC1). www.broad.mit.e...
Broad RIGGI_EWING_SARCOMA_PROGENITOR_UP View Gene Set 0.0003146 399 0.01123 67 Genes up-regulated in mesenchymal stem cells (MSC) engineered to express EWS-FLI1 [Gene ID=2130 2321] fusion protein. www.broad.mit.e...
Broad BORCZUK_MALIGNANT_MESOTHELIOMA_DN View Gene Set 0.0003257 100 0.01146 68 Genes down-regulated in biphasic (mixed) vs epithelial subtypes of malignant peritoneal mesothelioma. www.broad.mit.e...
Broad LY_AGING_MIDDLE_UP View Gene Set 0.0003599 13 0.01248 69 Genes up-regulated in fibroblasts from middle-age individuals compared to those from the young donors. www.broad.mit.e...
Broad MARSON_FOXP3_TARGETS_UP View Gene Set 0.0003737 54 0.01277 70 Genes up-regulated by FOXP3 [Gene ID=50943] in both ex vivo and hybridoma cells. www.broad.mit.e...
Broad BIDUS_METASTASIS_DN View Gene Set 0.0003819 145 0.01287 71 Genes down-regulated in endometroid endometrial tumors from patients with lymph node metastases compared to those without the metastases. www.broad.mit.e...
Broad SABATES_COLORECTAL_ADENOMA_DN View Gene Set 0.0003973 276 0.0132 72 Genes down-regulated in colorectal adenoma compared to normal mucosa samples. www.broad.mit.e...
Broad RICKMAN_HEAD_AND_NECK_CANCER_D View Gene Set 0.0004084 36 0.01338 73 Cluster d: genes identifying an intrinsic group in head and neck squamous cell carcinoma (HNSCC). www.broad.mit.e...
Broad KANNAN_TP53_TARGETS_UP View Gene Set 0.0004668 48 0.01509 74 Primary targets of TP53 (p53) [Gene ID=7157] in the H1299 (lung cancer) cell line. www.broad.mit.e...
Broad TURASHVILI_BREAST_DUCTAL_CARCINOMA_VS_DUCTAL_NORMAL_DN View Gene Set 0.0004868 186 0.01553 75 Genes down-regulated in ductal carcinoma vs normal ductal breast cells. www.broad.mit.e...
Broad LINDGREN_BLADDER_CANCER_CLUSTER_2B View Gene Set 0.00051 384 0.01605 76 Genes specifically up-regulated in Cluster IIb of urothelial cell carcinom (UCC) tumors. www.broad.mit.e...
Broad ACEVEDO_LIVER_TUMOR_VS_NORMAL_ADJACENT_TISSUE_DN View Gene Set 0.0005167 262 0.01605 77 Genes down-regulated in liver tumor compared to the normal adjacent tissue. www.broad.mit.e...
Broad WINTER_HYPOXIA_METAGENE View Gene Set 0.0005248 216 0.01609 78 Genes regulated by hypoxia based on literature searches. www.broad.mit.e...
Broad CROMER_TUMORIGENESIS_DN View Gene Set 0.0005658 43 0.01698 79 Tumorigenesis markers of head and neck squamous cell carcinoma (HNSCC): down-regulated in the 'early' tumors vs normal samples. www.broad.mit.e...
Broad SENGUPTA_EBNA1_ANTICORRELATED View Gene Set 0.0005678 156 0.01698 79 Genes whose reduced expression in nasopharyngeal carinoma (NPC) correlated most with the increased expression of EBNA1 [Gene ID=3783774] a latent gene of Epstein-Barr virus (EBV). www.broad.mit.e...
Broad CHANG_CORE_SERUM_RESPONSE_DN View Gene Set 0.0006852 30 0.02023 81 Down-regulated genes in the canonical gene expression signature of the fibroblast core serum response (CSR) defined by the Stanford group. www.broad.mit.e...
Broad GAURNIER_PSMD4_TARGETS View Gene Set 0.0007067 59 0.02061 82 Inflammatory cytokines chemokines and their cognate receptors up-regulated in THP-1 cells (monocyte) after treatment with PSMD4 [Gene ID=5710]. www.broad.mit.e...
Broad ZHOU_INFLAMMATORY_RESPONSE_LPS_UP View Gene Set 0.0007576 400 0.02108 83 Genes up-regulated in macrophages by P.gingivalis LPS (lipopolysaccharide). www.broad.mit.e...
Broad MARKEY_RB1_CHRONIC_LOF_DN View Gene Set 0.000758 111 0.02108 83 Genes down-regulated in MEF cells (embryonic fibroblasts) isolated from RB1 [Gene ID=5925] knockout mice: chronic loss of function (LOF) of RB1. www.broad.mit.e...
Broad SHEDDEN_LUNG_CANCER_GOOD_SURVIVAL_A4 View Gene Set 0.00075 189 0.02108 83 Cluster 4 of method A: up-regulation of these genes in patients with non-small cell lung cancer (NSCLC) predicts good survival outcome. www.broad.mit.e...
Broad BROWNE_HCMV_INFECTION_18HR_DN View Gene Set 0.0007379 171 0.02108 83 Genes down-regulated in primary fibroblast cell culture after infection with HCMV (AD169 strain) at 18 h time point that were not down-regulated at the previous time point 16 h. www.broad.mit.e...
Broad KOMMAGANI_TP63_GAMMA_TARGETS View Gene Set 0.000792 9 0.02177 87 Genes changed in H1299 cells (non-small cell lung cancer NSCLC) transiently transfected to express the TP63 [Gene ID=8626] gamma splice variant. www.broad.mit.e...
Broad TONKS_TARGETS_OF_RUNX1_RUNX1T1_FUSION_SUSTAINDED_IN_ERYTHROCYTE_UP View Gene Set 0.000901 43 0.02449 88 Genes up-regulated by RUNX1-RUNX1T1 [Gene ID=861 862] fusion protein in normal hematopoietic progenitors; their expression was sustained in subsequently developing erythroid lineage. www.broad.mit.e...
Broad KANG_CISPLATIN_RESISTANCE_UP View Gene Set 0.0009287 18 0.02496 89 Genes up-regulated in gastric cancer cell lines resistant to cisplatin [PubChem=2767]. www.broad.mit.e...
Broad EBAUER_TARGETS_OF_PAX3_FOXO1_FUSION_UP View Gene Set 0.0009452 201 0.02512 90 Genes up-regulated in Rh4 cells (alveolar rhabdomyosarcoma ARMS) after knockdown of the PAX3-FOXO1 [Gene iD=5077 2308] fusion protein by RNAi for 72 hr. www.broad.mit.e...
Broad KIM_RESPONSE_TO_TSA_AND_DECITABINE_UP View Gene Set 0.001025 126 0.02694 91 Genes up-regulated in glioma cell lines treated with both decitabine [PubChem=451668] and TSA [PubChem=5562]. www.broad.mit.e...
Broad SHI_SPARC_TARGETS_UP View Gene Set 0.001055 24 0.02744 92 Genes up-regulated in glioma cell lines after knockdown of SPARC [Gene ID=6678] by RNAi. www.broad.mit.e...
Broad ZHANG_RESPONSE_TO_IKK_INHIBITOR_AND_TNF_UP View Gene Set 0.00114 208 0.02906 93 Genes up-regulated in BxPC3 cells (pancreatic cancer) after treatment with TNF [Gene ID=7124] or IKI-1 an inhibitor of I?B kinase (IKK). www.broad.mit.e...
Broad SEMENZA_HIF1_TARGETS View Gene Set 0.001142 34 0.02906 93 Genes that are transcriptionally regulated by HIF1A [Gene ID=3091]. www.broad.mit.e...
Broad WANG_METHYLATED_IN_BREAST_CANCER View Gene Set 0.001222 32 0.03076 95 Genes up-regulated in MDA468 cells (breast cancer) vs DU99 cells (normal breast) after treatment with azacytidine [PubChem=9444]. www.broad.mit.e...
Broad GARGALOVIC_RESPONSE_TO_OXIDIZED_PHOSPHOLIPIDS_GREY_UP View Gene Set 0.001236 17 0.03081 96 Genes from the grey module which are up-regulated in HAEC cells (primary aortic endothelium) after exposure to the oxidized 1-palmitoyl-2-arachidonyl-sn-3-glycerophosphorylcholine (oxPAPC). www.broad.mit.e...
Broad FURUKAWA_DUSP6_TARGETS_PCI35_UP View Gene Set 0.001258 64 0.03102 97 Genes up-regulated in PCI-35 cells (pancreatic cancer lack endogenous DUSP6 [Gene ID=1848]) upon expression of DUSP6 off an adenoviral vector. www.broad.mit.e...
Broad MOOTHA_GLYCOLYSIS View Gene Set 0.001292 21 0.03154 98 Genes involved in glycolysis; based on literature and sequence annotation resources and converted to Affymetrix HG-U133A probe sets. www.broad.mit.e...
Broad SANA_RESPONSE_TO_IFNG_UP View Gene Set 0.001348 68 0.03256 99 Genes up-regulated in five primary endothelial cell types (lung aortic iliac dermal and colon) by IFNG [Gene ID=3458]. www.broad.mit.e...
Broad LUI_THYROID_CANCER_CLUSTER_5 View Gene Set 0.001431 14 0.03423 100 Cluster 5: genes with similar expression profiles across follicular thyroid carcinoma (FTC) samples. www.broad.mit.e...
Broad HUANG_FOXA2_TARGETS_DN View Gene Set 0.001507 36 0.03546 101 Genes down-regulated in H358 cells (lung cancer) by inducible expression of FOXA2 [GeneID=3170] in a Tet-off system. www.broad.mit.e...
Broad HELLEBREKERS_SILENCED_DURING_TUMOR_ANGIOGENESIS View Gene Set 0.001512 56 0.03546 101 Genes down-regulated in tumor-conditioned vs quiescent endothelial cells and up-regulated upon treatment with decitabine and TSA [PubChem=451668 5562]. www.broad.mit.e...
Broad VERHAAK_AML_WITH_NPM1_MUTATED_DN View Gene Set 0.001707 241 0.03963 103 Genes down-regulated in acute myeloid leukemia (AML) patients with mutated NPM1 [Gene ID=4869]. www.broad.mit.e...
Broad UDAYAKUMAR_MED1_TARGETS_DN View Gene Set 0.001753 230 0.04031 104 Genes down-regulated in HeLa cells after knockdown of MED1 [Gene ID=5469] by RNAi. www.broad.mit.e...
Broad KANG_IMMORTALIZED_BY_TERT_UP View Gene Set 0.00179 89 0.04077 105 Up-regulated genes in the signature of adipose stromal cells (ADSC) immortalized by forced expression of telomerase (TERT) [Gene ID=7015]. www.broad.mit.e...
Broad RHEIN_ALL_GLUCOCORTICOID_THERAPY_UP View Gene Set 0.001899 75 0.04203 106 Genes up-regulated in ALL (acute lymphoblastic leukemia) blasts after 1 week of treatment with glucocorticoids. www.broad.mit.e...
Broad ROSS_AML_WITH_MLL_FUSIONS View Gene Set 0.001874 76 0.04203 106 Top 100 probe sets for pediatric acute myeloid leukemia (AML) subtypes with chimeric MLL fusions [Gene ID=4297]. www.broad.mit.e...
Broad CROONQUIST_STROMAL_STIMULATION_UP View Gene Set 0.001915 47 0.04203 106 Genes up-regulated in ANBL-6 cell line (multiple myeloma MM) co-cultured with bone marrow stromal cells compared to those grown in the presence of IL6 [Gene ID=3569]. www.broad.mit.e...
Broad MOOTHA_GLUCONEOGENESIS View Gene Set 0.001894 32 0.04203 106 Genes involved in gluconeogenesis; based on literature and sequence annotation resources and converted to Affymetrix HG-U133A probe sets. www.broad.mit.e...
Broad NAGASHIMA_NRG1_SIGNALING_UP View Gene Set 0.001988 171 0.04298 110 Genes up-regulated in MCF7 cells (breast cancer) after stimulation with NRG1 [Gene ID=3084]. www.broad.mit.e...
Broad PEREZ_TP53_AND_TP63_TARGETS View Gene Set 0.001995 187 0.04298 110 Genes up-regulated in HMEC cells (primary mammary epithelium) upon expression of both of TP53 [Gene ID=7157] and the transcriptionally active isoform of TP63 [Gene ID=8626] off adenoviral vectors. www.broad.mit.e...
Broad TONKS_TARGETS_OF_RUNX1_RUNX1T1_FUSION_ERYTHROCYTE_UP View Gene Set 0.002104 155 0.04493 112 Genes up-regulated in erythroid lineage cells by RUNX1-RUNX1T1 [Gene ID=861 862] fusion . www.broad.mit.e...
Broad PARENT_MTOR_SIGNALING_DN View Gene Set 0.002167 44 0.04587 113 Genes down-regulated in HepaRG cells (liver cancer) expressing constituvely active form of MTOR [Gene ID=2475]. www.broad.mit.e...
Broad YAO_TEMPORAL_RESPONSE_TO_PROGESTERONE_CLUSTER_5 View Gene Set 0.00228 29 0.04785 114 Genes co-regulated in uterus during a time course response to progesterone [PubChem=5994]: SOM cluster 5. www.broad.mit.e...
Broad BOQUEST_STEM_CELL_DN View Gene Set 0.002311 8 0.04798 115 Genes down-regulated in freshly isolated CD31- [Gene ID=5175] (stromal stem cells from adipose tissue) versus the CD31+ (non-stem) counterparts. www.broad.mit.e...
Broad GUTIERREZ_CHRONIC_LYMPHOCYTIC_LEUKEMIA_DN View Gene Set 0.002327 53 0.04798 115 Genes exclusively down-regulated in B lymphocytes from CLL (chronic lymphocytic leukemia) patients but with a similiar expression pattern in the normal cells and in the cells from WM (Waldenstroem's macroblobulinemia) patients. www.broad.mit.e...

Gene Set Collection: Broad.c2.CP.KEGG

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad KEGG_ASCORBATE_AND_ALDARATE_METABOLISM View Gene Set 1.132e-07 25 2.106e-05 1 Ascorbate and aldarate metabolism www.broad.mit.e...
Broad KEGG_METABOLISM_OF_XENOBIOTICS_BY_CYTOCHROME_P450 View Gene Set 4.365e-07 70 4.059e-05 2 Metabolism of xenobiotics by cytochrome P450 www.broad.mit.e...
Broad KEGG_PENTOSE_AND_GLUCURONATE_INTERCONVERSIONS View Gene Set 1.329e-06 28 8.24e-05 3 Pentose and glucuronate interconversions www.broad.mit.e...
Broad KEGG_STEROID_HORMONE_BIOSYNTHESIS View Gene Set 6.129e-06 55 0.0001937 4 Steroid hormone biosynthesis www.broad.mit.e...
Broad KEGG_STARCH_AND_SUCROSE_METABOLISM View Gene Set 6.247e-06 52 0.0001937 4 Starch and sucrose metabolism www.broad.mit.e...
Broad KEGG_DRUG_METABOLISM_CYTOCHROME_P450 View Gene Set 5.647e-06 72 0.0001937 4 Drug metabolism - cytochrome P450 www.broad.mit.e...
Broad KEGG_TASTE_TRANSDUCTION View Gene Set 1.93e-05 52 0.0005129 7 Taste transduction www.broad.mit.e...
Broad KEGG_AUTOIMMUNE_THYROID_DISEASE View Gene Set 8.244e-05 53 0.001917 8 Autoimmune thyroid disease www.broad.mit.e...
Broad KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM View Gene Set 0.0001126 41 0.002326 9 Porphyrin and chlorophyll metabolism www.broad.mit.e...
Broad KEGG_GRAFT_VERSUS_HOST_DISEASE View Gene Set 0.0001573 42 0.002926 10 Graft-versus-host disease www.broad.mit.e...
Broad KEGG_ALLOGRAFT_REJECTION View Gene Set 0.0002075 38 0.003508 11 Allograft rejection www.broad.mit.e...
Broad KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION View Gene Set 0.0002976 267 0.004257 12 Cytokine-cytokine receptor interaction www.broad.mit.e...
Broad KEGG_TYPE_I_DIABETES_MELLITUS View Gene Set 0.0002751 44 0.004257 12 Type I diabetes mellitus www.broad.mit.e...
Broad KEGG_ECM_RECEPTOR_INTERACTION View Gene Set 0.0006631 84 0.00881 14 ECM-receptor interaction www.broad.mit.e...
Broad KEGG_GLYCOSPHINGOLIPID_BIOSYNTHESIS_GLOBO_SERIES View Gene Set 0.0007557 14 0.009371 15 Glycosphingolipid biosynthesis - globo series www.broad.mit.e...
Broad KEGG_LINOLEIC_ACID_METABOLISM View Gene Set 0.0008245 29 0.009585 16 Linoleic acid metabolism www.broad.mit.e...
Broad KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION View Gene Set 0.0009479 272 0.01037 17 Neuroactive ligand-receptor interaction www.broad.mit.e...
Broad KEGG_DRUG_METABOLISM_OTHER_ENZYMES View Gene Set 0.001307 51 0.0135 18 Drug metabolism - other enzymes www.broad.mit.e...
Broad KEGG_COMPLEMENT_AND_COAGULATION_CASCADES View Gene Set 0.002288 69 0.02128 19 Complement and coagulation cascades www.broad.mit.e...
Broad KEGG_OLFACTORY_TRANSDUCTION View Gene Set 0.002176 389 0.02128 19 Olfactory transduction www.broad.mit.e...
Broad KEGG_GLYCOLYSIS_GLUCONEOGENESIS View Gene Set 0.004576 62 0.04053 21 Glycolysis / Gluconeogenesis www.broad.mit.e...

Gene Set Collection: Broad.c2.CP.REACTOME

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad REACTOME_GLUCURONIDATION View Gene Set 8.533e-09 19 3.669e-06 1 Genes involved in Glucuronidation www.broad.mit.e...
Broad REACTOME_PHASE_II_CONJUGATION View Gene Set 2.375e-05 60 0.004735 2 Genes involved in Phase II conjugation www.broad.mit.e...
Broad REACTOME_GAP_JUNCTION_ASSEMBLY View Gene Set 3.468e-05 19 0.004735 2 Genes involved in Gap junction assembly www.broad.mit.e...
Broad REACTOME_GPCR_LIGAND_BINDING View Gene Set 4.404e-05 392 0.004735 2 Genes involved in GPCR ligand binding www.broad.mit.e...
Broad REACTOME_BIOLOGICAL_OXIDATIONS View Gene Set 8.25e-05 127 0.007095 5 Genes involved in Biological oxidations www.broad.mit.e...
Broad REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS View Gene Set 0.0002906 292 0.01689 6 Genes involved in Class A/1 (Rhodopsin-like receptors) www.broad.mit.e...
Broad REACTOME_DOWNSTREAM_EVENTS_IN_GPCR_SIGNALING View Gene Set 0.0002938 448 0.01689 6 Genes involved in Downstream events in GPCR signaling www.broad.mit.e...
Broad REACTOME_GLYCOLYSIS View Gene Set 0.0003142 22 0.01689 6 Genes involved in Glycolysis www.broad.mit.e...
Broad REACTOME_GAP_JUNCTION_TRAFFICKING View Gene Set 0.0006641 28 0.03173 9 Genes involved in Gap junction trafficking www.broad.mit.e...
Broad REACTOME_NCAM1_INTERACTIONS View Gene Set 0.0007956 43 0.03421 10 Genes involved in NCAM1 interactions www.broad.mit.e...

Gene Set Collection: Broad.c3.TFT

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad TGANTCA_V$AP1_C View Gene Set 1.005e-06 850 0.0005161 1 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TGANTCA which matches annotation for JUN: jun oncogene www.broad.mit.e...
Broad CAGGTG_V$E12_Q6 View Gene Set 1.678e-06 1818 0.0005161 1 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif CAGGTG which matches annotation for TCF3: transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47) www.broad.mit.e...
Broad V$AP1_01 View Gene Set 4.608e-06 204 0.0009447 3 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNNTGAGTCAKCN which matches annotation for JUN: jun oncogene www.broad.mit.e...
Broad V$NFKAPPAB_01 View Gene Set 2.338e-05 191 0.003595 4 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GGGAMTTYCC which matches annotation for NFKB<br> RELA: v-rel reticuloendotheliosis viral oncogene homolog A nuclear factor of kappa light polypeptide gene enhancer in B-cells 3 p65 (avian) www.broad.mit.e...
Broad CAGCTG_V$AP4_Q5 View Gene Set 3.122e-05 1129 0.00384 5 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif CAGCTG which matches annotation for REPIN1: replication initiator 1 www.broad.mit.e...
Broad CTGCAGY_UNKNOWN View Gene Set 6.227e-05 570 0.006383 6 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif CTGCAGY. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$NFE2_01 View Gene Set 8.769e-05 208 0.007704 7 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TGCTGAGTCAY which matches annotation for NFE2: nuclear factor (erythroid-derived 2) 45kDa www.broad.mit.e...
Broad TGASTMAGC_V$NFE2_01 View Gene Set 0.0001051 151 0.008081 8 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TGASTMAGC which matches annotation for NFE2: nuclear factor (erythroid-derived 2) 45kDa www.broad.mit.e...
Broad V$CEBPDELTA_Q6 View Gene Set 0.0001449 178 0.008911 9 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif MATTKCNTMAYY which matches annotation for CEBPD: CCAAT/enhancer binding protein (C/EBP) delta www.broad.mit.e...
Broad GGGAGGRR_V$MAZ_Q6 View Gene Set 0.0001336 1701 0.008911 9 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GGGAGGRR which matches annotation for MAZ: MYC-associated zinc finger protein (purine-binding transcription factor) www.broad.mit.e...
Broad V$NFKB_C View Gene Set 0.0001713 209 0.009577 11 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif NGGGACTTTCCA. Motif does not match any known transcription factor www.broad.mit.e...
Broad GGGTGGRR_V$PAX4_03 View Gene Set 0.0001931 994 0.009894 12 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GGGTGGRR which matches annotation for PAX4: paired box gene 4 www.broad.mit.e...
Broad GTGGGTGK_UNKNOWN View Gene Set 0.0002209 224 0.01045 13 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif GTGGGTGK. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$CP2_01 View Gene Set 0.0003508 194 0.01484 14 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GCHCDAMCCAG which matches annotation for TFCP2: transcription factor CP2 www.broad.mit.e...
Broad V$AP1_Q4_01 View Gene Set 0.0003619 204 0.01484 14 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TGAGTCAN which matches annotation for JUN: jun oncogene www.broad.mit.e...
Broad V$CREL_01 View Gene Set 0.0003931 203 0.01511 16 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif SGGRNTTTCC which matches annotation for REL: v-rel reticuloendotheliosis viral oncogene homolog (avian) www.broad.mit.e...
Broad V$ARP1_01 View Gene Set 0.0004961 122 0.01795 17 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TGARCCYTTGAMCCCW which matches annotation for PITX2: paired-like homeodomain transcription factor 2 www.broad.mit.e...
Broad V$STAT5B_01 View Gene Set 0.0005833 188 0.01993 18 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NAWTTCYNGGAAWTN which matches annotation for STAT5B: signal transducer and activator of transcription 5B www.broad.mit.e...
Broad V$AP1_C View Gene Set 0.0007896 222 0.02556 19 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NTGASTCAG which matches annotation for JUN: jun oncogene www.broad.mit.e...
Broad RYTTCCTG_V$ETS2_B View Gene Set 0.0008538 809 0.02625 20 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif RYTTCCTG which matches annotation for ETS2: v-ets erythroblastosis virus E26 oncogene homolog 2 (avian) www.broad.mit.e...
Broad V$ETS1_B View Gene Set 0.0009512 186 0.02659 21 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif RCAGGAAGTGNNTNS which matches annotation for ETS1: v-ets erythroblastosis virus E26 oncogene homolog 1 (avian) www.broad.mit.e...
Broad V$BACH1_01 View Gene Set 0.0009458 205 0.02659 21 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNSATGAGTCATGNT which matches annotation for BACH1: BTB and CNC homology 1 basic leucine zipper transcription factor 1 www.broad.mit.e...
Broad V$AREB6_01 View Gene Set 0.001334 198 0.03281 23 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNYNYACCTGWVT which matches annotation for TCF8: transcription factor 8 (represses interleukin 2 expression) www.broad.mit.e...
Broad V$NFKB_Q6_01 View Gene Set 0.001301 173 0.03281 23 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif NNNNKGGRAANTCCCN. Motif does not match any known transcription factor www.broad.mit.e...
Broad WGGAATGY_V$TEF1_Q6 View Gene Set 0.001253 281 0.03281 23 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif WGGAATGY which matches annotation for TEAD1: TEA domain family member 1 (SV40 transcriptional enhancer factor) www.broad.mit.e...
Broad V$PBX1_01 View Gene Set 0.001557 187 0.03308 26 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif ANCAATCAW which matches annotation for PBX1: pre-B-cell leukemia transcription factor 1 www.broad.mit.e...
Broad V$CREBP1_Q2 View Gene Set 0.001509 185 0.03308 26 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif VGTGACGTMACN which matches annotation for ATF2: activating transcription factor 2 www.broad.mit.e...
Broad V$NRF2_Q4 View Gene Set 0.00156 190 0.03308 26 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NTGCTGAGTCAKN which matches annotation for NFE2L2: nuclear factor (erythroid-derived 2)-like 2 www.broad.mit.e...
Broad V$AP1_Q2_01 View Gene Set 0.001446 221 0.03308 26 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TGACTCANNSKN which matches annotation for JUN: jun oncogene www.broad.mit.e...
Broad V$MZF1_01 View Gene Set 0.001775 179 0.03411 30 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif NGNGGGGA. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$STAT5A_01 View Gene Set 0.001764 190 0.03411 30 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NAWTTCYNGGAANYN which matches annotation for STAT5A: signal transducer and activator of transcription 5A www.broad.mit.e...
Broad V$ETS_Q4 View Gene Set 0.001747 179 0.03411 30 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif ANNCACTTCCTG which matches annotation for ETS1: v-ets erythroblastosis virus E26 oncogene homolog 1 (avian) www.broad.mit.e...
Broad V$ATF1_Q6 View Gene Set 0.002094 186 0.03902 33 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif CYYTGACGTCA which matches annotation for ATF1: activating transcription factor 1 www.broad.mit.e...
Broad V$IK2_01 View Gene Set 0.0023 208 0.0416 34 Genes with promoter regions [-2kb 2kb] around transcription start site containing motif NNNTGGGAWNNC. Motif does not match any known transcription factor www.broad.mit.e...
Broad V$MYOD_Q6 View Gene Set 0.002742 187 0.04818 35 Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNCACCTGNY which matches annotation for MYOD1: myogenic differentiation 1 www.broad.mit.e...

Gene Set Collection: Broad.c4.CGN

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad GNF2_DNM1 View Gene Set 2.055e-05 69 0.005533 1 Neighborhood of DNM1 www.broad.mit.e...
Broad GNF2_MAPT View Gene Set 3.037e-05 38 0.005533 1 Neighborhood of MAPT www.broad.mit.e...
Broad GNF2_RAB3A View Gene Set 3.887e-05 34 0.005533 1 Neighborhood of RAB3A www.broad.mit.e...
Broad MORF_MAGEA9 View Gene Set 0.0001908 405 0.01629 4 Neighborhood of MAGEA9 www.broad.mit.e...
Broad GCM_TEC View Gene Set 0.0001812 33 0.01629 4 Neighborhood of TEC www.broad.mit.e...
Broad MORF_ETV3 View Gene Set 0.0002427 63 0.01727 6 Neighborhood of ETV3 www.broad.mit.e...
Broad MORF_TNFRSF25 View Gene Set 0.0003425 242 0.01828 7 Neighborhood of TNFRSF25 www.broad.mit.e...
Broad GNF2_TM4SF2 View Gene Set 0.0003323 23 0.01828 7 Neighborhood of TM4SF2 www.broad.mit.e...
Broad MORF_BCL2 View Gene Set 0.000416 202 0.01974 9 Neighborhood of BCL2 www.broad.mit.e...
Broad MORF_ARL3 View Gene Set 0.0006731 291 0.02195 10 Neighborhood of ARL3 www.broad.mit.e...
Broad MORF_IL4 View Gene Set 0.0008741 186 0.02195 10 Neighborhood of IL4 www.broad.mit.e...
Broad MORF_PAX7 View Gene Set 0.0008676 251 0.02195 10 Neighborhood of PAX7 www.broad.mit.e...
Broad MORF_PTPRR View Gene Set 0.0008409 98 0.02195 10 Neighborhood of PTPRR www.broad.mit.e...
Broad GCM_HMGA2 View Gene Set 0.0007954 123 0.02195 10 Neighborhood of HMGA2 www.broad.mit.e...
Broad GCM_PTPRU View Gene Set 0.0005978 55 0.02195 10 Neighborhood of PTPRU www.broad.mit.e...
Broad GNF2_SERPINB5 View Gene Set 0.0006467 25 0.02195 10 Neighborhood of SERPINB5 www.broad.mit.e...
Broad GNF2_VAV1 View Gene Set 0.0005755 34 0.02195 10 Neighborhood of VAV1 www.broad.mit.e...
Broad MORF_NOS2A View Gene Set 0.000936 276 0.0222 18 Neighborhood of NOS2A www.broad.mit.e...
Broad GNF2_CD48 View Gene Set 0.00123 31 0.02764 19 Neighborhood of CD48 www.broad.mit.e...
Broad MORF_FOSL1 View Gene Set 0.001461 386 0.03119 20 Neighborhood of FOSL1 www.broad.mit.e...
Broad MORF_STK17A View Gene Set 0.001626 155 0.03307 21 Neighborhood of STK17A www.broad.mit.e...
Broad MORF_MAP2K7 View Gene Set 0.001823 179 0.03538 22 Neighborhood of MAP2K7 www.broad.mit.e...
Broad MORF_NF1 View Gene Set 0.002125 158 0.03946 23 Neighborhood of NF1 www.broad.mit.e...
Broad MORF_CTSB View Gene Set 0.002537 182 0.04334 24 Neighborhood of CTSB www.broad.mit.e...
Broad GCM_LTK View Gene Set 0.002477 43 0.04334 24 Neighborhood of LTK www.broad.mit.e...
Broad MORF_FLT1 View Gene Set 0.002761 117 0.04534 26 Neighborhood of FLT1 www.broad.mit.e...
Broad GNF2_HLA-C View Gene Set 0.003069 44 0.04853 27 Neighborhood of HLA-C www.broad.mit.e...

Gene Set Collection: Broad.c4.CM

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad module_88 View Gene Set 4.436e-15 812 2.014e-12 1 Genes in module_88 www.broad.mit.e...
Broad module_55 View Gene Set 1.55e-14 807 3.519e-12 2 Genes in module_55 www.broad.mit.e...
Broad module_84 View Gene Set 2.943e-11 526 4.454e-09 3 Genes in module_84 www.broad.mit.e...
Broad module_60 View Gene Set 2.28e-10 403 2.071e-08 4 Genes in module_60 www.broad.mit.e...
Broad module_137 View Gene Set 2.278e-10 525 2.071e-08 4 Genes in module_137 www.broad.mit.e...
Broad module_38 View Gene Set 4.966e-10 453 3.221e-08 6 Genes in module_38 www.broad.mit.e...
Broad module_66 View Gene Set 4.334e-10 530 3.221e-08 6 Genes in module_66 www.broad.mit.e...
Broad module_100 View Gene Set 6.386e-10 523 3.624e-08 8 Genes in module_100 www.broad.mit.e...
Broad module_6 View Gene Set 1.059e-09 403 5.299e-08 9 Genes in module_6 www.broad.mit.e...
Broad module_23 View Gene Set 1.167e-09 552 5.299e-08 9 Genes in module_23 www.broad.mit.e...
Broad module_2 View Gene Set 2.425e-08 373 1.001e-06 11 Genes in module_2 www.broad.mit.e...
Broad module_45 View Gene Set 4.167e-08 563 1.576e-06 12 Genes in module_45 www.broad.mit.e...
Broad module_11 View Gene Set 6.788e-08 520 2.371e-06 13 Genes in module_11 www.broad.mit.e...
Broad module_220 View Gene Set 9.045e-08 328 2.933e-06 14 Genes in module_220 www.broad.mit.e...
Broad module_47 View Gene Set 3.455e-07 216 1.046e-05 15 Genes in module_47 www.broad.mit.e...
Broad module_345 View Gene Set 5.202e-07 118 1.476e-05 16 Genes in module_345 www.broad.mit.e...
Broad module_5 View Gene Set 9.417e-07 420 2.515e-05 17 Genes in module_5 www.broad.mit.e...
Broad module_92 View Gene Set 1.124e-06 146 2.835e-05 18 Genes in module_92 www.broad.mit.e...
Broad module_122 View Gene Set 1.329e-06 138 3.176e-05 19 Genes in module_122 www.broad.mit.e...
Broad module_1 View Gene Set 2.681e-06 355 5.532e-05 20 Genes in module_1 www.broad.mit.e...
Broad module_64 View Gene Set 2.586e-06 506 5.532e-05 20 Genes in module_64 www.broad.mit.e...
Broad module_157 View Gene Set 2.595e-06 105 5.532e-05 20 Genes in module_157 www.broad.mit.e...
Broad module_117 View Gene Set 4.194e-06 699 7.934e-05 23 Genes in module_117 www.broad.mit.e...
Broad module_436 View Gene Set 4.104e-06 129 7.934e-05 23 Genes in module_436 www.broad.mit.e...
Broad module_41 View Gene Set 5.081e-06 542 9.228e-05 25 Genes in module_41 www.broad.mit.e...
Broad module_111 View Gene Set 5.928e-06 151 0.0001035 26 Genes in module_111 www.broad.mit.e...
Broad module_292 View Gene Set 7.466e-06 129 0.0001255 27 Genes in module_292 www.broad.mit.e...
Broad module_24 View Gene Set 1.101e-05 443 0.0001785 28 Genes in module_24 www.broad.mit.e...
Broad module_75 View Gene Set 1.297e-05 391 0.0002031 29 Genes in module_75 www.broad.mit.e...
Broad module_12 View Gene Set 1.397e-05 346 0.0002114 30 Genes in module_12 www.broad.mit.e...
Broad module_104 View Gene Set 3.499e-05 337 0.0005124 31 Genes in module_104 www.broad.mit.e...
Broad module_46 View Gene Set 3.77e-05 386 0.0005349 32 Genes in module_46 www.broad.mit.e...
Broad module_44 View Gene Set 9.77e-05 319 0.001344 33 Genes in module_44 www.broad.mit.e...
Broad module_171 View Gene Set 0.000103 131 0.001375 34 Genes in module_171 www.broad.mit.e...
Broad module_208 View Gene Set 0.000229 118 0.002916 35 Genes in module_208 www.broad.mit.e...
Broad module_324 View Gene Set 0.0002312 131 0.002916 35 Genes in module_324 www.broad.mit.e...
Broad module_426 View Gene Set 0.0003086 82 0.003786 37 Genes in module_426 www.broad.mit.e...
Broad module_316 View Gene Set 0.0003249 70 0.003881 38 Genes in module_316 www.broad.mit.e...
Broad module_274 View Gene Set 0.0004591 82 0.005345 39 Genes in module_274 www.broad.mit.e...
Broad module_181 View Gene Set 0.0005008 292 0.005616 40 Genes in module_181 www.broad.mit.e...
Broad module_418 View Gene Set 0.0005072 56 0.005616 40 Genes in module_418 www.broad.mit.e...
Broad module_433 View Gene Set 0.0007148 60 0.007726 42 Genes in module_433 www.broad.mit.e...
Broad module_63 View Gene Set 0.0007591 210 0.007832 43 Genes in module_63 www.broad.mit.e...
Broad module_513 View Gene Set 0.0007436 8 0.007832 43 Genes in module_513 www.broad.mit.e...
Broad module_287 View Gene Set 0.0008256 49 0.008329 45 Genes in module_287 www.broad.mit.e...
Broad module_49 View Gene Set 0.001169 245 0.01154 46 Genes in module_49 www.broad.mit.e...
Broad module_33 View Gene Set 0.001275 369 0.01232 47 Genes in module_33 www.broad.mit.e...
Broad module_27 View Gene Set 0.001379 345 0.01305 48 Genes in module_27 www.broad.mit.e...
Broad module_342 View Gene Set 0.00153 195 0.01417 49 Genes in module_342 www.broad.mit.e...
Broad module_107 View Gene Set 0.001642 77 0.01491 50 Genes in module_107 www.broad.mit.e...
Broad module_379 View Gene Set 0.001889 194 0.01682 51 Genes in module_379 www.broad.mit.e...
Broad module_112 View Gene Set 0.002117 255 0.01848 52 Genes in module_112 www.broad.mit.e...
Broad module_163 View Gene Set 0.002278 495 0.01915 53 Genes in module_163 www.broad.mit.e...
Broad module_301 View Gene Set 0.002248 144 0.01915 53 Genes in module_301 www.broad.mit.e...
Broad module_13 View Gene Set 0.002528 498 0.01946 55 Genes in module_13 www.broad.mit.e...
Broad module_19 View Gene Set 0.00248 306 0.01946 55 Genes in module_19 www.broad.mit.e...
Broad module_20 View Gene Set 0.00251 81 0.01946 55 Genes in module_20 www.broad.mit.e...
Broad module_95 View Gene Set 0.002475 490 0.01946 55 Genes in module_95 www.broad.mit.e...
Broad module_311 View Gene Set 0.002464 18 0.01946 55 Genes in module_311 www.broad.mit.e...
Broad module_361 View Gene Set 0.002943 136 0.02227 60 Genes in module_361 www.broad.mit.e...
Broad module_176 View Gene Set 0.003029 225 0.02254 61 Genes in module_176 www.broad.mit.e...
Broad module_131 View Gene Set 0.003297 33 0.02335 62 Genes in module_131 www.broad.mit.e...
Broad module_213 View Gene Set 0.003394 77 0.02335 62 Genes in module_213 www.broad.mit.e...
Broad module_248 View Gene Set 0.003391 126 0.02335 62 Genes in module_248 www.broad.mit.e...
Broad module_293 View Gene Set 0.003348 12 0.02335 62 Genes in module_293 www.broad.mit.e...
Broad module_382 View Gene Set 0.003281 28 0.02335 62 Genes in module_382 www.broad.mit.e...
Broad module_144 View Gene Set 0.003451 8 0.02339 67 Genes in module_144 www.broad.mit.e...
Broad module_368 View Gene Set 0.004362 18 0.02912 68 Genes in module_368 www.broad.mit.e...
Broad module_154 View Gene Set 0.004596 73 0.03024 69 Genes in module_154 www.broad.mit.e...
Broad module_94 View Gene Set 0.004677 362 0.03033 70 Genes in module_94 www.broad.mit.e...
Broad module_109 View Gene Set 0.00594 34 0.03709 71 Genes in module_109 www.broad.mit.e...
Broad module_172 View Gene Set 0.005907 93 0.03709 71 Genes in module_172 www.broad.mit.e...
Broad module_400 View Gene Set 0.005964 19 0.03709 71 Genes in module_400 www.broad.mit.e...
Broad module_242 View Gene Set 0.006067 204 0.03722 74 Genes in module_242 www.broad.mit.e...
Broad module_297 View Gene Set 0.006291 78 0.03808 75 Genes in module_297 www.broad.mit.e...
Broad module_164 View Gene Set 0.006686 61 0.03942 76 Genes in module_164 www.broad.mit.e...
Broad module_357 View Gene Set 0.006644 78 0.03942 76 Genes in module_357 www.broad.mit.e...
Broad module_119 View Gene Set 0.006863 135 0.03994 78 Genes in module_119 www.broad.mit.e...
Broad module_289 View Gene Set 0.007148 118 0.04108 79 Genes in module_289 www.broad.mit.e...
Broad module_209 View Gene Set 0.007548 86 0.04283 80 Genes in module_209 www.broad.mit.e...

Gene Set Collection: Broad.c5.BP

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad SYSTEM_PROCESS View Gene Set 5.772e-09 558 4.762e-06 1 Genes annotated by the GO term GO:0003008. A biological process occurring at the level of an organ system pertinent to the function of the organism. An organ system is a regularly interacting or interdependent group of organs or tissues that work together to carry out a given biological process. www.broad.mit.e...
Broad REGULATION_OF_BIOLOGICAL_QUALITY View Gene Set 6.523e-06 406 0.001008 2 Genes annotated by the GO term GO:0065008. Any process that modulates the frequency rate or extent of a biological quality. A biological quality is a measurable attribute of an organism or part of an organism such as size mass shape color etc. www.broad.mit.e...
Broad DEFENSE_RESPONSE View Gene Set 3.214e-06 264 0.001008 2 Genes annotated by the GO term GO:0006952. Reactions triggered in response to the presence of a foreign body or the occurrence of an injury which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack. www.broad.mit.e...
Broad MULTICELLULAR_ORGANISMAL_DEVELOPMENT View Gene Set 8.029e-06 1037 0.001008 2 Genes annotated by the GO term GO:0007275. The biological process whose specific outcome is the progression of an organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult). www.broad.mit.e...
Broad CELL_CELL_SIGNALING View Gene Set 5.212e-06 400 0.001008 2 Genes annotated by the GO term GO:0007267. Any process that mediates the transfer of information from one cell to another. www.broad.mit.e...
Broad IMMUNE_RESPONSE View Gene Set 5.977e-06 232 0.001008 2 Genes annotated by the GO term GO:0006955. Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat. www.broad.mit.e...
Broad CHEMICAL_HOMEOSTASIS View Gene Set 8.553e-06 151 0.001008 2 Genes annotated by the GO term GO:0048878. The biological processes involved in the maintenance of an internal equilibrium of a chemical. www.broad.mit.e...
Broad CELL_SURFACE_RECEPTOR_LINKED_SIGNAL_TRANSDUCTION_GO_0007166 View Gene Set 2.624e-05 620 0.002706 8 Genes annotated by the GO term GO:0007166. Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell. www.broad.mit.e...
Broad MONOVALENT_INORGANIC_CATION_TRANSPORT View Gene Set 3.811e-05 92 0.003494 9 Genes annotated by the GO term GO:0015672. The directed movement of inorganic cations with a valency of one into out of within or between cells. Inorganic cations are atoms or small molecules with a positive charge which do not contain carbon in covalent linkage. www.broad.mit.e...
Broad SYSTEM_DEVELOPMENT View Gene Set 5.253e-05 853 0.004334 10 Genes annotated by the GO term GO:0048731. The process whose specific outcome is the progression of an organismal system over time from its formation to the mature structure. A system is a regularly interacting or interdependent group of organs or tissues that work together to carry out a given biological process. www.broad.mit.e...
Broad IMMUNE_SYSTEM_PROCESS View Gene Set 7.035e-05 326 0.005276 11 Genes annotated by the GO term GO:0002376. Any process involved in the development or functioning of the immune system an organismal system for calibrated responses to potential internal or invasive threats. www.broad.mit.e...
Broad POTASSIUM_ION_TRANSPORT View Gene Set 9.153e-05 58 0.006292 12 Genes annotated by the GO term GO:0006813. The directed movement of potassium ions (K+) into out of within or between cells. www.broad.mit.e...
Broad NEUROLOGICAL_SYSTEM_PROCESS View Gene Set 0.0001219 377 0.006747 13 Genes annotated by the GO term GO:0050877. The processes pertaining to the functions of the nervous system of an organism. www.broad.mit.e...
Broad HOMEOSTATIC_PROCESS View Gene Set 0.0001105 202 0.006747 13 Genes annotated by the GO term GO:0042592. The biological processes involved in the maintenance of an internal equilibrium. www.broad.mit.e...
Broad ION_HOMEOSTASIS View Gene Set 0.0001227 124 0.006747 13 Genes annotated by the GO term GO:0050801. Any of the processes involved in the maintenance of an internal equilibrium of ions within an organism or cell. www.broad.mit.e...
Broad ANATOMICAL_STRUCTURE_DEVELOPMENT View Gene Set 0.0001321 1004 0.006811 16 Genes annotated by the GO term GO:0048856. The biological process whose specific outcome is the progression of an anatomical structure from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure whatever form that may be including its natural destruction. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel or microscopic such as an acrosome. www.broad.mit.e...
Broad RESPONSE_TO_EXTERNAL_STIMULUS View Gene Set 0.0002061 305 0.009991 17 Genes annotated by the GO term GO:0009605. A change in state or activity of a cell or an organism (in terms of movement secretion enzyme production gene expression etc.) as a result of an external stimulus. www.broad.mit.e...
Broad ION_TRANSPORT View Gene Set 0.000218 183 0.009991 17 Genes annotated by the GO term GO:0006811. The directed movement of charged atoms or small charged molecules into out of within or between cells. www.broad.mit.e...
Broad METAL_ION_TRANSPORT View Gene Set 0.0002414 116 0.01018 19 Genes annotated by the GO term GO:0030001. The directed movement of metal ions any metal ion with an electric charge into out of within or between cells. www.broad.mit.e...
Broad CELLULAR_HOMEOSTASIS View Gene Set 0.0002591 141 0.01018 19 Genes annotated by the GO term GO:0019725. The processes involved in the maintenance of an internal equilibrium at the level of the cell. www.broad.mit.e...
Broad G_PROTEIN_COUPLED_RECEPTOR_PROTEIN_SIGNALING_PATHWAY View Gene Set 0.0002521 326 0.01018 19 Genes annotated by the GO term GO:0007186. The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand. www.broad.mit.e...
Broad POSITIVE_REGULATION_OF_CATALYTIC_ACTIVITY View Gene Set 0.000307 157 0.01151 22 Genes annotated by the GO term GO:0043085. Any process that activates or increases the activity of an enzyme. www.broad.mit.e...
Broad CELLULAR_DEFENSE_RESPONSE View Gene Set 0.0003453 57 0.01238 23 Genes annotated by the GO term GO:0006968. A defense response that is mediated by cells. www.broad.mit.e...
Broad REGULATION_OF_BODY_FLUID_LEVELS View Gene Set 0.0003852 56 0.01324 24 Genes annotated by the GO term GO:0050878. Any process that modulates the levels of body fluids. www.broad.mit.e...
Broad LIPID_HOMEOSTASIS View Gene Set 0.0004642 17 0.01532 25 Genes annotated by the GO term GO:0055088. Any of the processes involved in the maintenance of an internal equilibrium of lipid within an organism or cell. www.broad.mit.e...
Broad ORGAN_DEVELOPMENT View Gene Set 0.0006263 567 0.01987 26 Genes annotated by the GO term GO:0048513. Development of a tissue or tissues that work together to perform a specific function or functions. Development pertains to the process whose specific outcome is the progression of a structure over time from its formation to the mature structure. Organs are commonly observed as visibly distinct structures but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions. www.broad.mit.e...
Broad SENSORY_PERCEPTION View Gene Set 0.0008558 190 0.02528 27 Genes annotated by the GO term GO:0007600. The series of events required for an organism to receive a sensory stimulus convert it to a molecular signal and recognize and characterize the signal. www.broad.mit.e...
Broad CATION_TRANSPORT View Gene Set 0.0008581 145 0.02528 27 Genes annotated by the GO term GO:0006812. The directed movement of cations atoms or small molecules with a net positive charge into out of within or between cells. www.broad.mit.e...
Broad HEMOSTASIS View Gene Set 0.001054 47 0.02998 29 Genes annotated by the GO term GO:0007599. The stopping of bleeding (loss of body fluid) or the arrest of the circulation to an organ or part. www.broad.mit.e...
Broad RESPONSE_TO_WOUNDING View Gene Set 0.001095 184 0.03011 30 Genes annotated by the GO term GO:0009611. A change in state or activity of a cell or an organism (in terms of movement secretion enzyme production gene expression etc.) as a result of a stimulus indicating damage to the organism. www.broad.mit.e...
Broad CDC42_PROTEIN_SIGNAL_TRANSDUCTION View Gene Set 0.001288 13 0.03428 31 Genes annotated by the GO term GO:0032488. A series of molecular signals within the cell that are mediated by the Cdc42 protein switching to a GTP-bound active state. www.broad.mit.e...
Broad PROTEIN_HOMOOLIGOMERIZATION View Gene Set 0.001565 22 0.04036 32 Genes annotated by the GO term GO:0051260. The process of creating protein oligomers compounds composed of a small number usually between three and ten of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer. www.broad.mit.e...
Broad CATION_HOMEOSTASIS View Gene Set 0.001631 104 0.04077 33 Genes annotated by the GO term GO:0055080. The regulation of the levels transport and metabolism of cations. www.broad.mit.e...
Broad REGULATION_OF_HYDROLASE_ACTIVITY View Gene Set 0.002011 75 0.0488 34 Genes annotated by the GO term GO:0051336. Any process that modulates the frequency rate or extent of hydrolase activity the catalysis of the hydrolysis of various bonds e.g. C-O C-N C-C phosphoric anhydride bonds etc. Hydrolase is the systematic name for any enzyme of EC class 3. www.broad.mit.e...

Gene Set Collection: Broad.c5.CC

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad EXTRACELLULAR_REGION View Gene Set 1.045e-09 437 2.436e-07 1 Genes annotated by the GO term GO:0005576. The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite. www.broad.mit.e...
Broad EXTRACELLULAR_REGION_PART View Gene Set 2.334e-07 331 2.72e-05 2 Genes annotated by the GO term GO:0044421. Any constituent part of the extracellular region the space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers constituent parts of the host cell environment outside an intracellular parasite. www.broad.mit.e...
Broad INTRINSIC_TO_PLASMA_MEMBRANE View Gene Set 5.715e-06 978 0.0004438 3 Genes annotated by the GO term GO:0031226. Located in the plasma membrane such that some covalently attached portion of the gene product for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor spans or is embedded in one or both leaflets of the membrane. www.broad.mit.e...
Broad PLASMA_MEMBRANE_PART View Gene Set 8.401e-06 1142 0.0004894 4 Genes annotated by the GO term GO:0044459. Any constituent part of the plasma membrane the membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. www.broad.mit.e...
Broad INTEGRAL_TO_PLASMA_MEMBRANE View Gene Set 1.261e-05 964 0.0005876 5 Genes annotated by the GO term GO:0005887. Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. www.broad.mit.e...
Broad COLLAGEN View Gene Set 1.933e-05 23 0.0007506 6 Genes annotated by the GO term GO:0005581. Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures. www.broad.mit.e...
Broad PROTEINACEOUS_EXTRACELLULAR_MATRIX View Gene Set 6.114e-05 98 0.002018 7 Genes annotated by the GO term GO:0005578. A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity. www.broad.mit.e...
Broad INTRINSIC_TO_MEMBRANE View Gene Set 7.795e-05 1319 0.002018 7 Genes annotated by the GO term GO:0031224. Located in a membrane such that some covalently attached portion of the gene product for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor spans or is embedded in one or both leaflets of the membrane. www.broad.mit.e...
Broad EXTRACELLULAR_MATRIX View Gene Set 7.082e-05 100 0.002018 7 Genes annotated by the GO term GO:0031012. A structure lying external to one or more cells which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants). www.broad.mit.e...
Broad EXTRACELLULAR_SPACE View Gene Set 9.649e-05 239 0.002248 10 Genes annotated by the GO term GO:0005615. That part of a multicellular organism outside the cells proper usually taken to be outside the plasma membranes and occupied by fluid. www.broad.mit.e...
Broad EXTRACELLULAR_MATRIX_PART View Gene Set 0.0001483 57 0.003064 11 Genes annotated by the GO term GO:0044420. Any constituent part of the extracellular matrix the structure lying external to one or more cells which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as often seen in plants). www.broad.mit.e...
Broad INTEGRAL_TO_MEMBRANE View Gene Set 0.0001578 1301 0.003064 11 Genes annotated by the GO term GO:0016021. Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein indicates that all or part of the peptide sequence is embedded in the membrane. www.broad.mit.e...
Broad PLASMA_MEMBRANE View Gene Set 0.0001777 1392 0.003186 13 Genes annotated by the GO term GO:0005886. The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. www.broad.mit.e...
Broad VOLTAGE_GATED_POTASSIUM_CHANNEL_COMPLEX View Gene Set 0.0003718 40 0.006188 14 Genes annotated by the GO term GO:0008076. A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential. www.broad.mit.e...
Broad CELL_SURFACE View Gene Set 0.001307 76 0.02031 15 Genes annotated by the GO term GO:0009986. The external part of the cell wall and/or plasma membrane. www.broad.mit.e...

Gene Set Collection: Broad.c5.MF

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Broad SUBSTRATE_SPECIFIC_CHANNEL_ACTIVITY View Gene Set 3.238e-06 154 0.0004274 1 Genes annotated by the GO term GO:0022838. Catalysis of energy-independent facilitated diffusion mediated by passage of a specific solute through a transmembrane aqueous pore or channel. Stereospecificity is not exhibited but this transport may be specific for a particular molecular species or class of molecules. www.broad.mit.e...
Broad RECEPTOR_BINDING View Gene Set 1.579e-06 373 0.0004274 1 Genes annotated by the GO term GO:0005102. Interacting selectively with one or more specific sites on a receptor molecule a macromolecule that undergoes combination with a hormone neurotransmitter drug or intracellular messenger to initiate a change in cell function. www.broad.mit.e...
Broad ION_TRANSMEMBRANE_TRANSPORTER_ACTIVITY View Gene Set 2.65e-06 275 0.0004274 1 Genes annotated by the GO term GO:0015075. Catalysis of the transfer of an ion from one side of a membrane to the other. www.broad.mit.e...
Broad ION_CHANNEL_ACTIVITY View Gene Set 4.658e-06 147 0.0004612 4 Genes annotated by the GO term GO:0005216. Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism. www.broad.mit.e...
Broad GATED_CHANNEL_ACTIVITY View Gene Set 7.857e-06 121 0.0006223 5 Genes annotated by the GO term GO:0022836. Catalysis of the transmembrane transfer of a solute by a channel that opens in response to a specific stimulus. www.broad.mit.e...
Broad CATION_CHANNEL_ACTIVITY View Gene Set 2.832e-05 118 0.001869 6 Genes annotated by the GO term GO:0005261. Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient. www.broad.mit.e...
Broad METAL_ION_TRANSMEMBRANE_TRANSPORTER_ACTIVITY View Gene Set 3.883e-05 145 0.002197 7 Genes annotated by the GO term GO:0046873. Catalysis of the transfer of metal ions from one side of a membrane to the other. www.broad.mit.e...
Broad VOLTAGE_GATED_CHANNEL_ACTIVITY View Gene Set 4.833e-05 73 0.002392 8 Genes annotated by the GO term GO:0022832. Catalysis of the transmembrane transfer of a solute by a channel whose open state is dependent on the voltage across the membrane in which it is embedded. www.broad.mit.e...
Broad SUBSTRATE_SPECIFIC_TRANSPORTER_ACTIVITY View Gene Set 6.218e-05 389 0.002736 9 Genes annotated by the GO term GO:0022892. Enables the directed movement of a specific substance or group of related substances (such as macromolecules small molecules ions) into out of within or between cells. www.broad.mit.e...
Broad VOLTAGE_GATED_CATION_CHANNEL_ACTIVITY View Gene Set 0.0001328 66 0.00526 10 Genes annotated by the GO term GO:0022843. Catalysis of the transmembrane transfer of a cation by a voltage-gated channel. A cation is a positively charged ion. www.broad.mit.e...
Broad POTASSIUM_CHANNEL_ACTIVITY View Gene Set 0.000167 50 0.006012 11 Genes annotated by the GO term GO:0005267. Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism. www.broad.mit.e...
Broad CATION_TRANSMEMBRANE_TRANSPORTER_ACTIVITY View Gene Set 0.0002409 211 0.007776 12 Genes annotated by the GO term GO:0008324. Catalysis of the transfer of cation from one side of the membrane to the other. www.broad.mit.e...
Broad SUBSTRATE_SPECIFIC_TRANSMEMBRANE_TRANSPORTER_ACTIVITY View Gene Set 0.0002749 341 0.007776 12 Genes annotated by the GO term GO:0022891. Catalysis of the transfer of a specific substance or group of related substances from one side of a membrane to the other. www.broad.mit.e...
Broad GROWTH_FACTOR_ACTIVITY View Gene Set 0.0002654 54 0.007776 12 Genes annotated by the GO term GO:0008083. The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation. www.broad.mit.e...
Broad VOLTAGE_GATED_POTASSIUM_CHANNEL_ACTIVITY View Gene Set 0.0004312 36 0.01138 15 Genes annotated by the GO term GO:0005249. Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel. www.broad.mit.e...
Broad TRANSMEMBRANE_TRANSPORTER_ACTIVITY View Gene Set 0.0006394 371 0.01582 16 Genes annotated by the GO term GO:0022857. Catalysis of the transfer of a substance from one side of a membrane to the other. www.broad.mit.e...

Gene Set Collection: PMID

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
PMID 20452482 View Gene Set 3.026e-10 188 7.586e-07 1 Identification of fetal and maternal single nucleotide polymorphisms in candidate genes that predispose to spontaneous preterm labor with intact membranes. www.ncbi.nlm.ni...
PMID 10836148 View Gene Set 1.218e-07 14 6.107e-05 2 Human UDP-glucuronosyltransferases: metabolism expression and disease. www.ncbi.nlm.ni...
PMID 11434514 View Gene Set 1.218e-07 12 6.107e-05 2 Thirteen UDPglucuronosyltransferase genes are encoded at the human UGT1 gene complex locus. www.ncbi.nlm.ni...
PMID 11465080 View Gene Set 1.218e-07 10 6.107e-05 2 UDP-glucuronosyltransferases. www.ncbi.nlm.ni...
PMID 9295054 View Gene Set 8.211e-08 14 6.107e-05 2 The UDP glycosyltransferase gene superfamily: recommended nomenclature update based on evolutionary divergence. www.ncbi.nlm.ni...
PMID 15340161 View Gene Set 1.731e-07 264 7.231e-05 6 Signal peptide prediction based on analysis of experimentally verified cleavage sites. www.ncbi.nlm.ni...
PMID 18834073 View Gene Set 8.733e-07 18 0.0003128 7 Mucin gene expression in human laryngeal epithelia: effect of laryngopharyngeal reflux. www.ncbi.nlm.ni...
PMID 16335952 View Gene Set 1.577e-06 257 0.0004391 8 Human plasma N-glycoproteome analysis by immunoaffinity subtraction hydrazide chemistry and mass spectrometry. www.ncbi.nlm.ni...
PMID 19419973 View Gene Set 1.546e-06 13 0.0004391 8 Common variants in the SLCO1B3 locus are associated with bilirubin levels and unconjugated hyperbilirubinemia. www.ncbi.nlm.ni...
PMID 12975309 View Gene Set 2.735e-06 1000 0.0006857 10 The secreted protein discovery initiative (SPDI) a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment. www.ncbi.nlm.ni...
PMID 14672974 View Gene Set 8.324e-06 12 0.001897 11 Multiple variable first exons: a mechanism for cell- and tissue-specific gene regulation. www.ncbi.nlm.ni...
PMID 20237496 View Gene Set 1.115e-05 828 0.00233 12 New genetic associations detected in a host response study to hepatitis B vaccine. www.ncbi.nlm.ni...
PMID 12359730 View Gene Set 1.559e-05 40 0.003006 13 Characterization of a first domain of human high glycine-tyrosine and high sulfur keratin-associated protein (KAP) genes on chromosome 21q22.1. www.ncbi.nlm.ni...
PMID 19420105 View Gene Set 1.736e-05 81 0.003108 14 A candidate gene approach to genetic prognostic factors of IgA nephropathy--a result of Polymorphism REsearch to DIstinguish genetic factors Contributing To progression of IgA Nephropathy (PREDICT-IgAN). www.ncbi.nlm.ni...
PMID 18161889 View Gene Set 2.624e-05 12 0.004385 15 Detoxification enzyme polymorphisms are not involved in duodenal adenomatosis in familial adenomatous polyposis. www.ncbi.nlm.ni...
PMID 19414484 View Gene Set 3.621e-05 22 0.005674 16 Genome-wide association meta-analysis for total serum bilirubin levels. www.ncbi.nlm.ni...
PMID 12679517 View Gene Set 4.238e-05 31 0.00625 17 The G protein-coupled receptor repertoires of human and mouse. www.ncbi.nlm.ni...
PMID 19131662 View Gene Set 5.192e-05 64 0.00678 18 A meta-analysis of candidate gene polymorphisms and ischemic stroke in 6 study populations: association of lymphotoxin-alpha in nonhypertensive patients. www.ncbi.nlm.ni...
PMID 19263529 View Gene Set 5.108e-05 57 0.00678 18 Genetic risk factors in recurrent venous thromboembolism: A multilocus population-based prospective approach. www.ncbi.nlm.ni...
PMID 19736351 View Gene Set 5.409e-05 31 0.00678 18 Recurrent rearrangements in synaptic and neurodevelopmental genes and shared biologic pathways in schizophrenia autism and mental retardation. www.ncbi.nlm.ni...
PMID 1973146 View Gene Set 5.916e-05 43 0.007063 21 Nomenclature for human homeobox genes. www.ncbi.nlm.ni...
PMID 16771603 View Gene Set 8.068e-05 13 0.009193 22 Pharmacogenetic screening for polymorphisms in drug-metabolizing enzymes and drug transporters in a Dutch population. www.ncbi.nlm.ni...
PMID 18720901 View Gene Set 8.935e-05 19 0.009739 23 Genetic profiling of genes from the oxidative stress pathway among North and South Indians. www.ncbi.nlm.ni...
PMID 19956635 View Gene Set 9.35e-05 108 0.009767 24 Fulfilling the promise of personalized medicine? Systematic review and field synopsis of pharmacogenetic studies. www.ncbi.nlm.ni...
PMID 20036902 View Gene Set 0.0001201 10 0.01158 25 Hemostatic gene polymorphisms in young Sardinian with non-fatal acute myocardial infarction. www.ncbi.nlm.ni...
PMID 20424473 View Gene Set 0.0001181 146 0.01158 25 L-type voltage-dependent calcium channel alpha subunit 1C is a novel candidate gene associated with secondary hyperparathyroidism: an application of haplotype-based analysis for multiple linked single nucleotide polymorphisms. www.ncbi.nlm.ni...
PMID 19948975 View Gene Set 0.000252 229 0.0234 27 Integrative predictive model of coronary artery calcification in atherosclerosis. www.ncbi.nlm.ni...
PMID 7913356 View Gene Set 0.0002658 13 0.0238 28 HIV-1 gp41 enhances major histocompatibility complex class I and ICAM-1 expression on H9 and U937 cells. www.ncbi.nlm.ni...
PMID 8084338 View Gene Set 0.0002795 21 0.02416 29 HIV-1 gp41 binding proteins and antibodies to gp41 could inhibit enhancement of human Raji cell MHC class I and II expression by gp41. www.ncbi.nlm.ni...
PMID 19479237 View Gene Set 0.0002988 57 0.02425 30 Phenotype-genotype interactions on renal function in type 2 diabetes: an analysis using structural equation modelling. www.ncbi.nlm.ni...
PMID 19644155 View Gene Set 0.0002998 11 0.02425 30 Evaluation of the genetic background of standard-immunosuppressant-related toxicity in a cohort of 200 paediatric renal allograft recipients--a retrospective study. www.ncbi.nlm.ni...
PMID 19349540 View Gene Set 0.0003784 12 0.02965 32 Comprehensive pharmacogenetic analysis of irinotecan neutropenia and pharmacokinetics. www.ncbi.nlm.ni...
PMID 1358459 View Gene Set 0.0004253 40 0.03231 33 Vertebrate homeobox gene nomenclature. www.ncbi.nlm.ni...
PMID 2574852 View Gene Set 0.0004713 29 0.03475 34 The human HOX gene family. www.ncbi.nlm.ni...
PMID 18513389 View Gene Set 0.0005982 35 0.03997 35 New application of intelligent agents in sporadic amyotrophic lateral sclerosis identifies unexpected specific genetic background. www.ncbi.nlm.ni...
PMID 19086053 View Gene Set 0.0006321 301 0.03997 35 Identification of new putative susceptibility genes for several psychiatric disorders by association analysis of regulatory and non-synonymous SNPs of 306 genes involved in neurotransmission and neurodevelopment. www.ncbi.nlm.ni...
PMID 19180518 View Gene Set 0.0006349 25 0.03997 35 Associations of 25 structural degradative and inflammatory candidate genes with lumbar disc desiccation bulging and height narrowing. www.ncbi.nlm.ni...
PMID 19544559 View Gene Set 0.0006048 12 0.03997 35 Synergistic effect of HLA class II loci and cytokine gene polymorphisms on the risk of gastric cancer in Japanese patients with Helicobacter pylori infection. www.ncbi.nlm.ni...
PMID 19559392 View Gene Set 0.000562 52 0.03997 35 A candidate gene association study of 77 polymorphisms in migraine. www.ncbi.nlm.ni...
PMID 20503287 View Gene Set 0.0006378 205 0.03997 35 Interleukin-9 polymorphism in infants with respiratory syncytial virus infection: an opposite effect in boys and girls. www.ncbi.nlm.ni...
PMID 11857506 View Gene Set 0.0007021 38 0.04194 41 Complete mutation analysis panel of the 39 human HOX genes. www.ncbi.nlm.ni...
PMID 20378664 View Gene Set 0.0007026 26 0.04194 41 Analysis of multiple candidate genes in association with phenotypes of multiple sclerosis. www.ncbi.nlm.ni...
PMID 12427289 View Gene Set 0.0007587 20 0.04323 43 HIV-1 gp120 modulates the immunological function and expression of accessory and co-stimulatory molecules of monocyte-derived dendritic cells. www.ncbi.nlm.ni...
PMID 9373155 View Gene Set 0.0007474 10 0.04323 43 Identification of dynein heavy chain genes expressed in human and mouse testis: chromosomal localization of an axonemal dynein gene. www.ncbi.nlm.ni...
PMID 12960109 View Gene Set 0.000793 10 0.04418 45 Irinotecan pathway genotype analysis to predict pharmacokinetics. www.ncbi.nlm.ni...
PMID 10391210 View Gene Set 0.0008709 16 0.04731 46 Patterns of single-nucleotide polymorphisms in candidate genes for blood-pressure homeostasis. www.ncbi.nlm.ni...
PMID 17703412 View Gene Set 0.000887 207 0.04731 46 Genetic susceptibility to respiratory syncytial virus bronchiolitis is predominantly associated with innate immune genes. www.ncbi.nlm.ni...

Gene Set Collection: Prosite

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null PS50835 View Gene Set 1.648e-10 658 1.211e-07 1 IG_LIKE expasy.org/pros...
Null PS00022 View Gene Set 2.156e-09 151 7.924e-07 2 EGF_1 expasy.org/pros...
Null PS50026 View Gene Set 5.592e-09 207 1.37e-06 3 EGF_3 expasy.org/pros...
Null PS00375 View Gene Set 1.363e-08 23 2.505e-06 4 UDPGT expasy.org/pros...
Null PS51233 View Gene Set 1.241e-07 24 1.824e-05 5 VWFD expasy.org/pros...
Null PS50092 View Gene Set 1.529e-07 68 1.873e-05 6 TSP1 expasy.org/pros...
Null PS01186 View Gene Set 2.858e-07 171 3.001e-05 7 EGF_2 expasy.org/pros...
Null PS00027 View Gene Set 2.39e-06 197 0.0002196 8 HOMEOBOX_1 expasy.org/pros...
Null PS50071 View Gene Set 3.54e-06 264 0.0002891 9 HOMEOBOX_2 expasy.org/pros...
Null PS50184 View Gene Set 6.328e-06 35 0.0004651 10 VWFC_2 expasy.org/pros...
Null PS00010 View Gene Set 1.067e-05 103 0.0007131 11 ASX_HYDROXYL expasy.org/pros...
Null PS01187 View Gene Set 2.094e-05 99 0.001282 12 EGF_CA expasy.org/pros...
Null PS00290 View Gene Set 2.957e-05 86 0.001672 13 IG_MHC expasy.org/pros...
Null PS00407 View Gene Set 4.013e-05 19 0.001843 14 CONNEXINS_1 expasy.org/pros...
Null PS01208 View Gene Set 3.948e-05 34 0.001843 14 VWFC_1 expasy.org/pros...
Null PS50002 View Gene Set 3.736e-05 212 0.001843 14 SH3 expasy.org/pros...
Null PS00408 View Gene Set 4.342e-05 20 0.001877 17 CONNEXINS_2 expasy.org/pros...
Null PS50853 View Gene Set 8.151e-05 181 0.003328 18 FN3 expasy.org/pros...
Null PS00941 View Gene Set 0.0001554 14 0.006012 19 CARBOXYLESTERASE_B_2 expasy.org/pros...
Null PS00122 View Gene Set 0.0002041 9 0.007502 20 CARBOXYLESTERASE_B_1 expasy.org/pros...
Null PS01031 View Gene Set 0.0004175 10 0.01461 21 HSP20 expasy.org/pros...
Null PS51004 View Gene Set 0.0005464 31 0.01825 22 SEMA expasy.org/pros...
Null PS50259 View Gene Set 0.0006432 22 0.02055 23 G_PROTEIN_RECEP_F3_4 expasy.org/pros...
Null PS50240 View Gene Set 0.0008058 122 0.02468 24 TRYPSIN_DOM expasy.org/pros...
Null PS50262 View Gene Set 0.001127 765 0.03315 25 G_PROTEIN_RECEP_F1_2 expasy.org/pros...
Null PS50234 View Gene Set 0.001242 70 0.03471 26 VWFA expasy.org/pros...
Null PS51364 View Gene Set 0.001275 9 0.03471 26 TB expasy.org/pros...
Null PS50837 View Gene Set 0.001329 23 0.0349 28 NACHT expasy.org/pros...
Null PS00109 View Gene Set 0.001693 98 0.04148 29 PROTEIN_KINASE_TYR expasy.org/pros...
Null PS00119 View Gene Set 0.00169 8 0.04148 29 PA2_ASP expasy.org/pros...
Null PS50115 View Gene Set 0.001821 33 0.04318 31 ARFGAP expasy.org/pros...
Null PS01225 View Gene Set 0.001913 24 0.04395 32 CTCK_2 expasy.org/pros...
Null PS00237 View Gene Set 0.002103 555 0.04488 33 G_PROTEIN_RECEP_F1_1 expasy.org/pros...
Null PS00383 View Gene Set 0.002198 80 0.04488 33 TYR_PHOSPHATASE_1 expasy.org/pros...
Null PS50010 View Gene Set 0.002177 71 0.04488 33 DH_2 expasy.org/pros...
Null PS50106 View Gene Set 0.002129 153 0.04488 33 PDZ expasy.org/pros...
Null PS00284 View Gene Set 0.002671 33 0.04987 37 SERPIN expasy.org/pros...
Null PS00514 View Gene Set 0.002605 19 0.04987 37 FIBRINOGEN_C_1 expasy.org/pros...
Null PS40000 View Gene Set 0.002782 7 0.04987 37 DM_1 expasy.org/pros...
Null PS50809 View Gene Set 0.002782 7 0.04987 37 DM_2 expasy.org/pros...
Null PS51406 View Gene Set 0.002778 36 0.04987 37 FIBRINOGEN_C_2 expasy.org/pros...

Gene Set Collection: Enzyme

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null EC:2.4.1.17 View Gene Set 1.083e-09 19 1.712e-07 1 Glucuronosyltransferase expasy.org/enzy...

Gene Set Collection: miranda.targets

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null hsa-miR-637 View Gene Set 4.427e-12 2291 2.997e-09 1 microRNA targets for hsa-miR-637 from miranda.targets www.mirbase.org...
Null hsa-miR-1207-5p View Gene Set 6.176e-10 2608 1.523e-07 2 microRNA targets for hsa-miR-1207-5p from miranda.targets www.mirbase.org...
Null hsa-miR-939 View Gene Set 6.75e-10 2203 1.523e-07 2 microRNA targets for hsa-miR-939 from miranda.targets www.mirbase.org...
Null hsa-miR-615-5p View Gene Set 5.463e-09 1189 7.396e-07 4 microRNA targets for hsa-miR-615-5p from miranda.targets www.mirbase.org...
Null hsa-miR-744 View Gene Set 4.412e-09 797 7.396e-07 4 microRNA targets for hsa-miR-744 from miranda.targets www.mirbase.org...
Null hsa-miR-1225-3p View Gene Set 6.633e-09 950 7.484e-07 6 microRNA targets for hsa-miR-1225-3p from miranda.targets www.mirbase.org...
Null hsa-miR-661 View Gene Set 2.167e-08 2076 2.096e-06 7 microRNA targets for hsa-miR-661 from miranda.targets www.mirbase.org...
Null hsa-miR-486-3p View Gene Set 2.578e-08 1921 2.182e-06 8 microRNA targets for hsa-miR-486-3p from miranda.targets www.mirbase.org...
Null hsa-miR-296-5p View Gene Set 1.12e-07 887 8.423e-06 9 microRNA targets for hsa-miR-296-5p from miranda.targets www.mirbase.org...
Null hsa-miR-1234 View Gene Set 8.288e-07 510 5.101e-05 10 microRNA targets for hsa-miR-1234 from miranda.targets www.mirbase.org...
Null hsa-miR-24 View Gene Set 7.89e-07 1562 5.101e-05 10 microRNA targets for hsa-miR-24 from miranda.targets www.mirbase.org...
Null hsa-miR-608 View Gene Set 4.64e-06 2815 0.0002618 12 microRNA targets for hsa-miR-608 from miranda.targets www.mirbase.org...
Null hsa-miR-612 View Gene Set 1.101e-05 2298 0.0005734 13 microRNA targets for hsa-miR-612 from miranda.targets www.mirbase.org...
Null hsa-miR-766 View Gene Set 1.247e-05 1609 0.0006032 14 microRNA targets for hsa-miR-766 from miranda.targets www.mirbase.org...
Null hsa-miR-663 View Gene Set 1.365e-05 993 0.0006162 15 microRNA targets for hsa-miR-663 from miranda.targets www.mirbase.org...
Null hsa-miR-1247 View Gene Set 1.991e-05 575 0.0007484 16 microRNA targets for hsa-miR-1247 from miranda.targets www.mirbase.org...
Null hsa-miR-1296 View Gene Set 1.846e-05 949 0.0007484 16 microRNA targets for hsa-miR-1296 from miranda.targets www.mirbase.org...
Null hsa-miR-423-5p View Gene Set 2.1e-05 1898 0.0007484 16 microRNA targets for hsa-miR-423-5p from miranda.targets www.mirbase.org...
Null hsa-miR-940 View Gene Set 2.051e-05 1873 0.0007484 16 microRNA targets for hsa-miR-940 from miranda.targets www.mirbase.org...
Null hsa-miR-326 View Gene Set 2.725e-05 1567 0.0009223 20 microRNA targets for hsa-miR-326 from miranda.targets www.mirbase.org...
Null hsa-miR-1207-3p View Gene Set 4.174e-05 1414 0.001346 21 microRNA targets for hsa-miR-1207-3p from miranda.targets www.mirbase.org...
Null hsa-miR-615-3p View Gene Set 4.775e-05 476 0.00147 22 microRNA targets for hsa-miR-615-3p from miranda.targets www.mirbase.org...
Null hsa-miR-1266 View Gene Set 5.698e-05 2015 0.001554 23 microRNA targets for hsa-miR-1266 from miranda.targets www.mirbase.org...
Null hsa-miR-149 View Gene Set 5.97e-05 1693 0.001554 23 microRNA targets for hsa-miR-149 from miranda.targets www.mirbase.org...
Null hsa-miR-331-3p View Gene Set 5.478e-05 1191 0.001554 23 microRNA targets for hsa-miR-331-3p from miranda.targets www.mirbase.org...
Null hsa-miR-370 View Gene Set 5.966e-05 1528 0.001554 23 microRNA targets for hsa-miR-370 from miranda.targets www.mirbase.org...
Null hsa-miR-1180 View Gene Set 7.19e-05 468 0.001738 27 microRNA targets for hsa-miR-1180 from miranda.targets www.mirbase.org...
Null hsa-miR-658 View Gene Set 7.145e-05 1103 0.001738 27 microRNA targets for hsa-miR-658 from miranda.targets www.mirbase.org...
Null hsa-miR-720 View Gene Set 8.051e-05 342 0.00187 29 microRNA targets for hsa-miR-720 from miranda.targets www.mirbase.org...
Null hsa-miR-886-5p View Gene Set 8.288e-05 504 0.00187 29 microRNA targets for hsa-miR-886-5p from miranda.targets www.mirbase.org...
Null hsa-miR-769-3p View Gene Set 8.744e-05 1112 0.00191 31 microRNA targets for hsa-miR-769-3p from miranda.targets www.mirbase.org...
Null hsa-miR-611 View Gene Set 9.275e-05 441 0.001962 32 microRNA targets for hsa-miR-611 from miranda.targets www.mirbase.org...
Null hsa-miR-760 View Gene Set 0.0001627 1689 0.003339 33 microRNA targets for hsa-miR-760 from miranda.targets www.mirbase.org...
Null hsa-miR-346 View Gene Set 0.0001722 1001 0.003342 34 microRNA targets for hsa-miR-346 from miranda.targets www.mirbase.org...
Null hsa-miR-665 View Gene Set 0.0001728 1901 0.003342 34 microRNA targets for hsa-miR-665 from miranda.targets www.mirbase.org...
Null hsa-miR-324-3p View Gene Set 0.0002589 1277 0.004869 36 microRNA targets for hsa-miR-324-3p from miranda.targets www.mirbase.org...
Null hsa-miR-574-3p View Gene Set 0.0002862 381 0.005099 37 microRNA targets for hsa-miR-574-3p from miranda.targets www.mirbase.org...
Null hsa-miR-874 View Gene Set 0.0002824 1222 0.005099 37 microRNA targets for hsa-miR-874 from miranda.targets www.mirbase.org...
Null hsa-miR-886-3p View Gene Set 0.0003463 377 0.006011 39 microRNA targets for hsa-miR-886-3p from miranda.targets www.mirbase.org...
Null hsa-miR-484 View Gene Set 0.0003662 1263 0.006198 40 microRNA targets for hsa-miR-484 from miranda.targets www.mirbase.org...
Null hsa-miR-330-5p View Gene Set 0.0004452 1945 0.007352 41 microRNA targets for hsa-miR-330-5p from miranda.targets www.mirbase.org...
Null hsa-miR-1268 View Gene Set 0.0004936 508 0.007956 42 microRNA targets for hsa-miR-1268 from miranda.targets www.mirbase.org...
Null hsa-miR-1275 View Gene Set 0.000533 1509 0.008392 43 microRNA targets for hsa-miR-1275 from miranda.targets www.mirbase.org...
Null hsa-miR-1321 View Gene Set 0.0007639 1850 0.01175 44 microRNA targets for hsa-miR-1321 from miranda.targets www.mirbase.org...
Null hsa-miR-491-5p View Gene Set 0.0008013 1297 0.01206 45 microRNA targets for hsa-miR-491-5p from miranda.targets www.mirbase.org...
Null hsa-miR-1205 View Gene Set 0.0008738 1762 0.01286 46 microRNA targets for hsa-miR-1205 from miranda.targets www.mirbase.org...
Null hsa-miR-631 View Gene Set 0.0009109 745 0.01312 47 microRNA targets for hsa-miR-631 from miranda.targets www.mirbase.org...
Null hsa-miR-1204 View Gene Set 0.0009651 619 0.01361 48 microRNA targets for hsa-miR-1204 from miranda.targets www.mirbase.org...
Null hsa-miR-342-5p View Gene Set 0.001029 861 0.0138 49 microRNA targets for hsa-miR-342-5p from miranda.targets www.mirbase.org...
Null hsa-miR-541 View Gene Set 0.0011 1275 0.0138 49 microRNA targets for hsa-miR-541 from miranda.targets www.mirbase.org...
Null hsa-miR-566 View Gene Set 0.001087 340 0.0138 49 microRNA targets for hsa-miR-566 from miranda.targets www.mirbase.org...
Null hsa-miR-638 View Gene Set 0.001049 515 0.0138 49 microRNA targets for hsa-miR-638 from miranda.targets www.mirbase.org...
Null hsa-miR-645 View Gene Set 0.00105 760 0.0138 49 microRNA targets for hsa-miR-645 from miranda.targets www.mirbase.org...
Null hsa-miR-654-5p View Gene Set 0.00108 1123 0.0138 49 microRNA targets for hsa-miR-654-5p from miranda.targets www.mirbase.org...
Null hsa-miR-1291 View Gene Set 0.001218 1386 0.01499 55 microRNA targets for hsa-miR-1291 from miranda.targets www.mirbase.org...
Null hsa-miR-485-5p View Gene Set 0.001252 1753 0.01513 56 microRNA targets for hsa-miR-485-5p from miranda.targets www.mirbase.org...
Null hsa-miR-602 View Gene Set 0.001324 652 0.01559 57 microRNA targets for hsa-miR-602 from miranda.targets www.mirbase.org...
Null hsa-miR-663b View Gene Set 0.001336 871 0.01559 57 microRNA targets for hsa-miR-663b from miranda.targets www.mirbase.org...
Null hsa-miR-328 View Gene Set 0.001919 1308 0.02202 59 microRNA targets for hsa-miR-328 from miranda.targets www.mirbase.org...
Null hsa-miR-423-3p View Gene Set 0.002065 406 0.02311 60 microRNA targets for hsa-miR-423-3p from miranda.targets www.mirbase.org...
Null hsa-miR-524-3p View Gene Set 0.002083 369 0.02311 60 microRNA targets for hsa-miR-524-3p from miranda.targets www.mirbase.org...
Null hsa-miR-1254 View Gene Set 0.002283 1726 0.02493 62 microRNA targets for hsa-miR-1254 from miranda.targets www.mirbase.org...
Null hsa-miR-675 View Gene Set 0.002668 528 0.02867 63 microRNA targets for hsa-miR-675 from miranda.targets www.mirbase.org...
Null hsa-miR-1233 View Gene Set 0.002831 824 0.02995 64 microRNA targets for hsa-miR-1233 from miranda.targets www.mirbase.org...
Null hsa-miR-765 View Gene Set 0.00339 2575 0.03531 65 microRNA targets for hsa-miR-765 from miranda.targets www.mirbase.org...
Null hsa-miR-596 View Gene Set 0.004051 925 0.04155 66 microRNA targets for hsa-miR-596 from miranda.targets www.mirbase.org...
Null hsa-miR-525-3p View Gene Set 0.004377 418 0.04423 67 microRNA targets for hsa-miR-525-3p from miranda.targets www.mirbase.org...
Null hsa-miR-339-5p View Gene Set 0.004453 1258 0.04433 68 microRNA targets for hsa-miR-339-5p from miranda.targets www.mirbase.org...
Null hsa-miR-671-5p View Gene Set 0.005001 1578 0.04906 69 microRNA targets for hsa-miR-671-5p from miranda.targets www.mirbase.org...
Null hsa-miR-1203 View Gene Set 0.005107 503 0.04939 70 microRNA targets for hsa-miR-1203 from miranda.targets www.mirbase.org...
Null hsa-miR-1182 View Gene Set 0.005212 1715 0.0497 71 microRNA targets for hsa-miR-1182 from miranda.targets www.mirbase.org...

Gene Set Collection: mirbase.targets

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null hsa-miR-423-3p View Gene Set 4.175e-14 741 2.968e-11 1 microRNA targets for hsa-miR-423-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-663 View Gene Set 2.435e-12 743 8.657e-10 2 microRNA targets for hsa-miR-663 from mirbase.targets www.mirbase.org...
Null hsa-miR-296-5p View Gene Set 1.189e-11 755 2.817e-09 3 microRNA targets for hsa-miR-296-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-886-5p View Gene Set 2.346e-11 793 4.17e-09 4 microRNA targets for hsa-miR-886-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-149* View Gene Set 1.102e-10 459 1.566e-08 5 microRNA targets for hsa-miR-149* from mirbase.targets www.mirbase.org...
Null hsa-miR-615-5p View Gene Set 1.978e-10 848 2.344e-08 6 microRNA targets for hsa-miR-615-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-326 View Gene Set 5.039e-10 650 5.118e-08 7 microRNA targets for hsa-miR-326 from mirbase.targets www.mirbase.org...
Null hsa-miR-885-3p View Gene Set 6.849e-10 799 6.087e-08 8 microRNA targets for hsa-miR-885-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-330-5p View Gene Set 9.058e-10 728 7.156e-08 9 microRNA targets for hsa-miR-330-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-637 View Gene Set 3.221e-09 672 2.29e-07 10 microRNA targets for hsa-miR-637 from mirbase.targets www.mirbase.org...
Null hsa-miR-675 View Gene Set 1.492e-08 686 9.645e-07 11 microRNA targets for hsa-miR-675 from mirbase.targets www.mirbase.org...
Null hsa-miR-611 View Gene Set 4.102e-08 671 2.431e-06 12 microRNA targets for hsa-miR-611 from mirbase.targets www.mirbase.org...
Null hsa-miR-886-3p View Gene Set 6.539e-08 745 3.576e-06 13 microRNA targets for hsa-miR-886-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-604 View Gene Set 9.231e-08 691 4.688e-06 14 microRNA targets for hsa-miR-604 from mirbase.targets www.mirbase.org...
Null hsa-miR-602 View Gene Set 1.14e-07 710 5.405e-06 15 microRNA targets for hsa-miR-602 from mirbase.targets www.mirbase.org...
Null hsa-miR-370 View Gene Set 1.278e-07 710 5.678e-06 16 microRNA targets for hsa-miR-370 from mirbase.targets www.mirbase.org...
Null hsa-miR-631 View Gene Set 1.506e-07 714 6.301e-06 17 microRNA targets for hsa-miR-631 from mirbase.targets www.mirbase.org...
Null hsa-miR-486-3p View Gene Set 2.704e-07 773 1.068e-05 18 microRNA targets for hsa-miR-486-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-296-3p View Gene Set 3.146e-07 905 1.177e-05 19 microRNA targets for hsa-miR-296-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-769-5p View Gene Set 4.9e-07 790 1.716e-05 20 microRNA targets for hsa-miR-769-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-940 View Gene Set 5.067e-07 660 1.716e-05 20 microRNA targets for hsa-miR-940 from mirbase.targets www.mirbase.org...
Null hsa-miR-760 View Gene Set 9.542e-07 690 3.084e-05 22 microRNA targets for hsa-miR-760 from mirbase.targets www.mirbase.org...
Null hsa-miR-612 View Gene Set 1.519e-06 685 4.696e-05 23 microRNA targets for hsa-miR-612 from mirbase.targets www.mirbase.org...
Null hsa-miR-342-5p View Gene Set 1.848e-06 698 5.255e-05 24 microRNA targets for hsa-miR-342-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-541 View Gene Set 1.846e-06 711 5.255e-05 24 microRNA targets for hsa-miR-541 from mirbase.targets www.mirbase.org...
Null hsa-miR-608 View Gene Set 2.305e-06 729 6.304e-05 26 microRNA targets for hsa-miR-608 from mirbase.targets www.mirbase.org...
Null hsa-miR-323-5p View Gene Set 2.562e-06 763 6.747e-05 27 microRNA targets for hsa-miR-323-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-937 View Gene Set 3.302e-06 654 8.386e-05 28 microRNA targets for hsa-miR-937 from mirbase.targets www.mirbase.org...
Null hsa-miR-654-5p View Gene Set 4.674e-06 718 0.0001146 29 microRNA targets for hsa-miR-654-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-744 View Gene Set 5.497e-06 715 0.0001303 30 microRNA targets for hsa-miR-744 from mirbase.targets www.mirbase.org...
Null hsa-miR-324-3p View Gene Set 6.655e-06 788 0.0001526 31 microRNA targets for hsa-miR-324-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-560 View Gene Set 7.577e-06 730 0.0001683 32 microRNA targets for hsa-miR-560 from mirbase.targets www.mirbase.org...
Null hsa-miR-939 View Gene Set 9.224e-06 667 0.0001987 33 microRNA targets for hsa-miR-939 from mirbase.targets www.mirbase.org...
Null hsa-miR-484 View Gene Set 1.142e-05 733 0.0002389 34 microRNA targets for hsa-miR-484 from mirbase.targets www.mirbase.org...
Null hsa-miR-877* View Gene Set 1.443e-05 479 0.0002931 35 microRNA targets for hsa-miR-877* from mirbase.targets www.mirbase.org...
Null hsa-miR-185* View Gene Set 1.622e-05 506 0.0003203 36 microRNA targets for hsa-miR-185* from mirbase.targets www.mirbase.org...
Null hsa-miR-151-5p View Gene Set 2.178e-05 749 0.0004185 37 microRNA targets for hsa-miR-151-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-214* View Gene Set 2.352e-05 434 0.0004338 38 microRNA targets for hsa-miR-214* from mirbase.targets www.mirbase.org...
Null hsa-miR-23a* View Gene Set 2.396e-05 604 0.0004338 38 microRNA targets for hsa-miR-23a* from mirbase.targets www.mirbase.org...
Null hsa-miR-571 View Gene Set 2.441e-05 720 0.0004338 38 microRNA targets for hsa-miR-571 from mirbase.targets www.mirbase.org...
Null hsa-miR-658 View Gene Set 2.573e-05 660 0.0004462 41 microRNA targets for hsa-miR-658 from mirbase.targets www.mirbase.org...
Null hsa-miR-668 View Gene Set 2.77e-05 560 0.000469 42 microRNA targets for hsa-miR-668 from mirbase.targets www.mirbase.org...
Null hsa-miR-331-3p View Gene Set 2.968e-05 712 0.0004907 43 microRNA targets for hsa-miR-331-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-593 View Gene Set 3.085e-05 556 0.0004985 44 microRNA targets for hsa-miR-593 from mirbase.targets www.mirbase.org...
Null hsa-miR-339-5p View Gene Set 3.295e-05 659 0.0005206 45 microRNA targets for hsa-miR-339-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-766 View Gene Set 3.573e-05 517 0.0005406 46 microRNA targets for hsa-miR-766 from mirbase.targets www.mirbase.org...
Null hsa-miR-92b* View Gene Set 3.54e-05 648 0.0005406 46 microRNA targets for hsa-miR-92b* from mirbase.targets www.mirbase.org...
Null hsa-miR-609 View Gene Set 3.873e-05 687 0.0005737 48 microRNA targets for hsa-miR-609 from mirbase.targets www.mirbase.org...
Null hsa-miR-339-3p View Gene Set 4.275e-05 797 0.0006203 49 microRNA targets for hsa-miR-339-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-665 View Gene Set 4.756e-05 617 0.0006762 50 microRNA targets for hsa-miR-665 from mirbase.targets www.mirbase.org...
Null hsa-miR-371-3p View Gene Set 5.372e-05 750 0.000749 51 microRNA targets for hsa-miR-371-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-423-5p View Gene Set 6.442e-05 767 0.0008808 52 microRNA targets for hsa-miR-423-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-214 View Gene Set 7.132e-05 797 0.0009568 53 microRNA targets for hsa-miR-214 from mirbase.targets www.mirbase.org...
Null hsa-miR-328 View Gene Set 8.334e-05 685 0.001077 54 microRNA targets for hsa-miR-328 from mirbase.targets www.mirbase.org...
Null hsa-miR-572 View Gene Set 8.293e-05 602 0.001077 54 microRNA targets for hsa-miR-572 from mirbase.targets www.mirbase.org...
Null hsa-miR-638 View Gene Set 9.021e-05 639 0.001145 56 microRNA targets for hsa-miR-638 from mirbase.targets www.mirbase.org...
Null hsa-miR-340* View Gene Set 9.424e-05 358 0.001161 57 microRNA targets for hsa-miR-340* from mirbase.targets www.mirbase.org...
Null hsa-miR-615-3p View Gene Set 9.471e-05 757 0.001161 57 microRNA targets for hsa-miR-615-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-671-3p View Gene Set 9.755e-05 767 0.001176 59 microRNA targets for hsa-miR-671-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-765 View Gene Set 0.0001147 674 0.001359 60 microRNA targets for hsa-miR-765 from mirbase.targets www.mirbase.org...
Null hsa-miR-149 View Gene Set 0.0001296 602 0.00151 61 microRNA targets for hsa-miR-149 from mirbase.targets www.mirbase.org...
Null hsa-miR-623 View Gene Set 0.0001332 693 0.001528 62 microRNA targets for hsa-miR-623 from mirbase.targets www.mirbase.org...
Null hsa-miR-23b* View Gene Set 0.0001404 544 0.001584 63 microRNA targets for hsa-miR-23b* from mirbase.targets www.mirbase.org...
Null hsa-miR-483-3p View Gene Set 0.0001921 702 0.002069 64 microRNA targets for hsa-miR-483-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-504 View Gene Set 0.0001867 621 0.002069 64 microRNA targets for hsa-miR-504 from mirbase.targets www.mirbase.org...
Null hsa-miR-92a-1* View Gene Set 0.0001903 661 0.002069 64 microRNA targets for hsa-miR-92a-1* from mirbase.targets www.mirbase.org...
Null hsa-miR-220c View Gene Set 0.0002085 831 0.00218 67 microRNA targets for hsa-miR-220c from mirbase.targets www.mirbase.org...
Null hsa-miR-542-5p View Gene Set 0.0002065 774 0.00218 67 microRNA targets for hsa-miR-542-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-647 View Gene Set 0.0002191 724 0.002258 69 microRNA targets for hsa-miR-647 from mirbase.targets www.mirbase.org...
Null hsa-miR-650 View Gene Set 0.0002352 693 0.002389 70 microRNA targets for hsa-miR-650 from mirbase.targets www.mirbase.org...
Null hsa-miR-139-3p View Gene Set 0.0002872 736 0.002876 71 microRNA targets for hsa-miR-139-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-565 View Gene Set 0.000299 689 0.002952 72 microRNA targets for hsa-miR-565 from mirbase.targets www.mirbase.org...
Null hsa-miR-625 View Gene Set 0.0003406 650 0.003317 73 microRNA targets for hsa-miR-625 from mirbase.targets www.mirbase.org...
Null hsa-miR-125b-1* View Gene Set 0.0003487 622 0.00335 74 microRNA targets for hsa-miR-125b-1* from mirbase.targets www.mirbase.org...
Null hsa-miR-491-5p View Gene Set 0.000589 731 0.005584 75 microRNA targets for hsa-miR-491-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-505* View Gene Set 0.0006396 516 0.005984 76 microRNA targets for hsa-miR-505* from mirbase.targets www.mirbase.org...
Null hsa-miR-191* View Gene Set 0.0006837 462 0.006313 77 microRNA targets for hsa-miR-191* from mirbase.targets www.mirbase.org...
Null hsa-miR-874 View Gene Set 0.0007969 722 0.007264 78 microRNA targets for hsa-miR-874 from mirbase.targets www.mirbase.org...
Null hsa-miR-33b* View Gene Set 0.0008098 577 0.007288 79 microRNA targets for hsa-miR-33b* from mirbase.targets www.mirbase.org...
Null hsa-miR-299-3p View Gene Set 0.0008595 732 0.007639 80 microRNA targets for hsa-miR-299-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-92a-2* View Gene Set 0.0009302 654 0.008165 81 microRNA targets for hsa-miR-92a-2* from mirbase.targets www.mirbase.org...
Null hsa-miR-125a-5p View Gene Set 0.0009539 817 0.008271 82 microRNA targets for hsa-miR-125a-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-920 View Gene Set 0.001 661 0.008567 83 microRNA targets for hsa-miR-920 from mirbase.targets www.mirbase.org...
Null hsa-miR-596 View Gene Set 0.001016 644 0.008604 84 microRNA targets for hsa-miR-596 from mirbase.targets www.mirbase.org...
Null hsa-miR-619 View Gene Set 0.001067 674 0.008922 85 microRNA targets for hsa-miR-619 from mirbase.targets www.mirbase.org...
Null hsa-miR-662 View Gene Set 0.001089 663 0.009005 86 microRNA targets for hsa-miR-662 from mirbase.targets www.mirbase.org...
Null hsa-miR-25* View Gene Set 0.001471 418 0.01202 87 microRNA targets for hsa-miR-25* from mirbase.targets www.mirbase.org...
Null hsa-miR-642 View Gene Set 0.001502 609 0.01213 88 microRNA targets for hsa-miR-642 from mirbase.targets www.mirbase.org...
Null hsa-miR-769-3p View Gene Set 0.001792 823 0.01432 89 microRNA targets for hsa-miR-769-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-194* View Gene Set 0.002008 502 0.01586 90 microRNA targets for hsa-miR-194* from mirbase.targets www.mirbase.org...
Null hsa-miR-661 View Gene Set 0.002383 575 0.01862 91 microRNA targets for hsa-miR-661 from mirbase.targets www.mirbase.org...
Null hsa-miR-210 View Gene Set 0.00243 703 0.01864 92 microRNA targets for hsa-miR-210 from mirbase.targets www.mirbase.org...
Null hsa-miR-345 View Gene Set 0.002438 696 0.01864 92 microRNA targets for hsa-miR-345 from mirbase.targets www.mirbase.org...
Null hsa-miR-588 View Gene Set 0.0025 660 0.01871 94 microRNA targets for hsa-miR-588 from mirbase.targets www.mirbase.org...
Null hsa-miR-601 View Gene Set 0.002501 699 0.01871 94 microRNA targets for hsa-miR-601 from mirbase.targets www.mirbase.org...
Null hsa-miR-512-5p View Gene Set 0.002548 693 0.01887 96 microRNA targets for hsa-miR-512-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-500* View Gene Set 0.002832 538 0.02076 97 microRNA targets for hsa-miR-500* from mirbase.targets www.mirbase.org...
Null hsa-miR-877 View Gene Set 0.002936 668 0.0213 98 microRNA targets for hsa-miR-877 from mirbase.targets www.mirbase.org...
Null hsa-miR-324-5p View Gene Set 0.003097 801 0.02218 99 microRNA targets for hsa-miR-324-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-363* View Gene Set 0.003119 580 0.02218 99 microRNA targets for hsa-miR-363* from mirbase.targets www.mirbase.org...
Null hsa-miR-645 View Gene Set 0.003225 569 0.0227 101 microRNA targets for hsa-miR-645 from mirbase.targets www.mirbase.org...
Null hsa-miR-551a View Gene Set 0.003468 676 0.02417 102 microRNA targets for hsa-miR-551a from mirbase.targets www.mirbase.org...
Null hsa-miR-550 View Gene Set 0.003576 669 0.02469 103 microRNA targets for hsa-miR-550 from mirbase.targets www.mirbase.org...
Null hsa-miR-18b* View Gene Set 0.003835 565 0.02622 104 microRNA targets for hsa-miR-18b* from mirbase.targets www.mirbase.org...
Null hsa-miR-873 View Gene Set 0.004151 752 0.02811 105 microRNA targets for hsa-miR-873 from mirbase.targets www.mirbase.org...
Null hsa-miR-127-3p View Gene Set 0.004436 653 0.02976 106 microRNA targets for hsa-miR-127-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-532-3p View Gene Set 0.004795 657 0.03186 107 microRNA targets for hsa-miR-532-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-593* View Gene Set 0.005051 504 0.03326 108 microRNA targets for hsa-miR-593* from mirbase.targets www.mirbase.org...
Null hsa-miR-133a View Gene Set 0.005155 763 0.03363 109 microRNA targets for hsa-miR-133a from mirbase.targets www.mirbase.org...
Null hsa-miR-657 View Gene Set 0.005395 718 0.03487 110 microRNA targets for hsa-miR-657 from mirbase.targets www.mirbase.org...
Null hsa-miR-193a-5p View Gene Set 0.005659 767 0.03625 111 microRNA targets for hsa-miR-193a-5p from mirbase.targets www.mirbase.org...
Null hsa-miR-193b View Gene Set 0.006141 716 0.03898 112 microRNA targets for hsa-miR-193b from mirbase.targets www.mirbase.org...
Null hsa-miR-942 View Gene Set 0.006381 583 0.04015 113 microRNA targets for hsa-miR-942 from mirbase.targets www.mirbase.org...
Null hsa-miR-361-3p View Gene Set 0.006611 634 0.04123 114 microRNA targets for hsa-miR-361-3p from mirbase.targets www.mirbase.org...
Null hsa-miR-218-1* View Gene Set 0.006736 528 0.04165 115 microRNA targets for hsa-miR-218-1* from mirbase.targets www.mirbase.org...
Null hsa-miR-129* View Gene Set 0.007369 504 0.04517 116 microRNA targets for hsa-miR-129* from mirbase.targets www.mirbase.org...
Null hsa-miR-193b* View Gene Set 0.008248 586 0.04975 117 microRNA targets for hsa-miR-193b* from mirbase.targets www.mirbase.org...
Null hsa-miR-941 View Gene Set 0.008256 590 0.04975 117 microRNA targets for hsa-miR-941 from mirbase.targets www.mirbase.org...
Null hsa-miR-659 View Gene Set 0.008347 705 0.04987 119 microRNA targets for hsa-miR-659 from mirbase.targets www.mirbase.org...

Gene Set Collection: miRNAtargetUnion

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-615-5p View Gene Set 4.075e-16 1865 6.334e-13 1 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-615-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-637 View Gene Set 5.475e-16 2846 6.334e-13 1 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-637 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-296-5p View Gene Set 1.277e-14 1519 9.56e-12 3 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-296-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-939 View Gene Set 1.653e-14 2729 9.56e-12 3 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-939 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-663 View Gene Set 2.142e-13 1582 9.914e-11 5 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-663 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-886-5p View Gene Set 5.611e-13 1187 2.164e-10 6 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-886-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-423-3p View Gene Set 1.319e-12 1053 4.36e-10 7 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-423-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-326 View Gene Set 4.921e-12 2147 1.395e-09 8 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-326 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-326 View Gene Set 5.424e-12 2156 1.395e-09 8 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-326 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-744 View Gene Set 7.228e-12 1378 1.673e-09 10 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-744 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-326 View Gene Set 1.06e-10 2171 2.23e-08 11 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-326 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-608 View Gene Set 1.487e-10 3384 2.868e-08 12 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-608 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-611 View Gene Set 1.745e-10 1017 3.106e-08 13 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-611 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-486-3p View Gene Set 2.101e-10 2545 3.473e-08 14 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-486-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-661 View Gene Set 2.561e-10 2615 3.95e-08 15 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-661 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-423-5p View Gene Set 4.456e-10 2496 6.444e-08 16 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-423-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-330-5p View Gene Set 8.224e-10 2574 1.057e-07 17 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-330-5p from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-326 View Gene Set 8.028e-10 1065 1.057e-07 17 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-326 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-886-3p View Gene Set 1.114e-09 1039 1.357e-07 19 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-886-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-602 View Gene Set 1.835e-09 1257 2.123e-07 20 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-602 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-326 View Gene Set 3.467e-09 1066 3.82e-07 21 microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-326 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-342-5p View Gene Set 8.471e-09 1470 8.91e-07 22 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-342-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-675 View Gene Set 1.438e-08 1108 1.447e-06 23 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-675 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-370 View Gene Set 1.541e-08 2126 1.486e-06 24 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-370 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-760 View Gene Set 1.902e-08 2252 1.76e-06 25 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-760 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-370 View Gene Set 2.227e-08 2143 1.982e-06 26 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-370 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-324-3p View Gene Set 4.412e-08 1946 3.781e-06 27 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-324-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-330-5p View Gene Set 5.271e-08 2597 4.356e-06 28 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-330-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-615-3p View Gene Set 6.893e-08 1113 5.337e-06 29 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-615-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-615-3p View Gene Set 6.919e-08 1112 5.337e-06 29 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-615-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-654-5p View Gene Set 8.249e-08 1681 6.158e-06 31 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-654-5p from miRNAtargetUnion www.mirbase.org...
Null mirbase.pictar.targetscan.targetsUnion.hsa-miR-326 View Gene Set 8.597e-08 1071 6.217e-06 32 microRNA targets for mirbase.pictar.targetscan.targetsUnion.hsa-miR-326 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-658 View Gene Set 1.099e-07 1603 7.706e-06 33 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-658 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-766 View Gene Set 1.196e-07 2106 8.138e-06 34 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-766 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-885-3p View Gene Set 1.715e-07 1618 1.134e-05 35 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-885-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-324-3p View Gene Set 2.355e-07 1941 1.513e-05 36 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-324-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-331-3p View Gene Set 2.527e-07 1764 1.539e-05 37 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-331-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-612 View Gene Set 2.503e-07 2970 1.539e-05 37 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-612 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-631 View Gene Set 2.998e-07 1374 1.779e-05 39 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-631 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-541 View Gene Set 3.173e-07 1832 1.836e-05 40 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-541 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-296-3p View Gene Set 3.395e-07 2354 1.916e-05 41 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-296-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-326 View Gene Set 4.513e-07 1789 2.486e-05 42 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-326 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-940 View Gene Set 5.256e-07 2504 2.829e-05 43 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-940 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-330-5p View Gene Set 5.398e-07 1142 2.839e-05 44 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-330-5p from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-296-3p View Gene Set 6.469e-07 1042 3.326e-05 45 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-296-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.tarbase.targetsUnion.hsa-miR-24 View Gene Set 6.696e-07 1680 3.368e-05 46 microRNA targets for miranda.mirtarget2.tarbase.targetsUnion.hsa-miR-24 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-339-3p View Gene Set 8.22e-07 1044 4.047e-05 47 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-339-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-149 View Gene Set 8.83e-07 2201 4.257e-05 48 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-149 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-296-3p View Gene Set 1.18e-06 2397 5.572e-05 49 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-296-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-638 View Gene Set 1.757e-06 1054 8.132e-05 50 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-638 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-24 View Gene Set 1.815e-06 1812 8.235e-05 51 microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-24 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-24 View Gene Set 2.192e-06 2189 9.598e-05 52 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-24 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.tarbase.targetsUnion.hsa-miR-24 View Gene Set 2.198e-06 2089 9.598e-05 52 microRNA targets for miranda.mirbase.tarbase.targetsUnion.hsa-miR-24 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-665 View Gene Set 2.665e-06 2514 0.0001142 54 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-665 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-24 View Gene Set 2.852e-06 1845 0.00012 55 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-24 from miRNAtargetUnion www.mirbase.org...
Null miranda.tarbase.targetscan.targetsUnion.hsa-miR-24 View Gene Set 3.734e-06 1760 0.0001543 56 microRNA targets for miranda.tarbase.targetscan.targetsUnion.hsa-miR-24 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-326 View Gene Set 4.107e-06 1819 0.0001667 57 microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-326 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-346 View Gene Set 4.253e-06 1502 0.0001697 58 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-346 from miRNAtargetUnion www.mirbase.org...
Null miranda.pictar.tarbase.targetsUnion.hsa-miR-24 View Gene Set 4.603e-06 1711 0.0001805 59 microRNA targets for miranda.pictar.tarbase.targetsUnion.hsa-miR-24 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-149 View Gene Set 5.11e-06 2203 0.0001971 60 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-149 from miRNAtargetUnion www.mirbase.org...
Null miranda.pictar.targetscan.targetsUnion.hsa-miR-326 View Gene Set 5.52e-06 1813 0.0002094 61 microRNA targets for miranda.pictar.targetscan.targetsUnion.hsa-miR-326 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-937 View Gene Set 6.423e-06 820 0.0002397 62 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-937 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-323-5p View Gene Set 6.619e-06 1485 0.0002431 63 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-323-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-604 View Gene Set 6.916e-06 1079 0.00025 64 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-604 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-24 View Gene Set 7.484e-06 2258 0.0002664 65 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-24 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-324-3p View Gene Set 7.615e-06 1096 0.000267 66 microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-324-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.pictar.targetscan.targetsUnion.hsa-miR-24 View Gene Set 7.849e-06 1840 0.0002711 67 microRNA targets for miranda.pictar.targetscan.targetsUnion.hsa-miR-24 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-151-5p View Gene Set 8.319e-06 1244 0.0002822 68 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-151-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-484 View Gene Set 8.457e-06 1853 0.0002822 68 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-484 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-491-5p View Gene Set 8.538e-06 1882 0.0002822 68 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-491-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-149 View Gene Set 8.816e-06 2200 0.0002833 71 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-149 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-24 View Gene Set 8.699e-06 2222 0.0002833 71 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-24 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-645 View Gene Set 1.026e-05 1285 0.0003254 73 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-645 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-346 View Gene Set 1.045e-05 1493 0.0003267 74 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-346 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-370 View Gene Set 1.12e-05 1067 0.0003456 75 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-370 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-485-5p View Gene Set 1.379e-05 2231 0.0004198 76 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-485-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-491-5p View Gene Set 1.415e-05 1937 0.0004251 77 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-491-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-328 View Gene Set 1.739e-05 1838 0.0005158 78 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-328 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-874 View Gene Set 1.767e-05 1840 0.0005177 79 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-874 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-874 View Gene Set 1.92e-05 1806 0.0005553 80 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-874 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-328 View Gene Set 2.125e-05 1858 0.000607 81 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-328 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-339-5p View Gene Set 2.416e-05 1790 0.0006819 82 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-339-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-328 View Gene Set 2.93e-05 1892 0.000817 83 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-328 from miRNAtargetUnion www.mirbase.org...
Null mirbase.pictar.targetscan.targetsUnion.hsa-miR-328 View Gene Set 3.052e-05 916 0.0008407 84 microRNA targets for mirbase.pictar.targetscan.targetsUnion.hsa-miR-328 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-214 View Gene Set 3.685e-05 2832 0.001003 85 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-214 from miRNAtargetUnion www.mirbase.org...
Null miranda.pictar.targetscan.targetsUnion.hsa-miR-149 View Gene Set 3.971e-05 1859 0.001069 86 microRNA targets for miranda.pictar.targetscan.targetsUnion.hsa-miR-149 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-623 View Gene Set 4.078e-05 1834 0.001085 87 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-623 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-346 View Gene Set 4.211e-05 1521 0.001095 88 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-346 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-149 View Gene Set 4.193e-05 1882 0.001095 88 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-149 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-571 View Gene Set 5.051e-05 1591 0.001299 90 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-571 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-765 View Gene Set 6.314e-05 3105 0.001606 91 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-765 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-328 View Gene Set 6.964e-05 946 0.001751 92 microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-328 from miRNAtargetUnion www.mirbase.org...
Null miranda.pictar.targetscan.targetsUnion.hsa-miR-346 View Gene Set 7.701e-05 1078 0.001916 93 microRNA targets for miranda.pictar.targetscan.targetsUnion.hsa-miR-346 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-339-5p View Gene Set 9.904e-05 1899 0.002412 94 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-339-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-615-3p View Gene Set 9.858e-05 481 0.002412 94 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-615-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-596 View Gene Set 0.0001034 1484 0.002492 96 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-596 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-668 View Gene Set 0.0001212 1225 0.002892 97 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-668 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-346 View Gene Set 0.0001349 1115 0.003185 98 microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-346 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-330-5p View Gene Set 0.000137 2177 0.003201 99 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-330-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-769-3p View Gene Set 0.0001387 1837 0.003209 100 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-769-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-324-3p View Gene Set 0.0001591 1505 0.003608 101 microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-324-3p from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-615-3p View Gene Set 0.0001581 764 0.003608 101 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-615-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-874 View Gene Set 0.0001671 1362 0.003753 103 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-874 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-485-5p View Gene Set 0.0002116 2002 0.004709 104 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-485-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-769-5p View Gene Set 0.0002469 1676 0.00539 105 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-769-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-370 View Gene Set 0.0002465 1728 0.00539 105 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-370 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-324-5p View Gene Set 0.000254 1517 0.005492 107 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-324-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-572 View Gene Set 0.0002766 825 0.005925 108 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-572 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-485-5p View Gene Set 0.0002843 2302 0.006036 109 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-485-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-324-5p View Gene Set 0.000311 1488 0.006542 110 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-324-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-346 View Gene Set 0.0003142 1104 0.00655 111 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-346 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-483-3p View Gene Set 0.0003418 1648 0.007023 112 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-483-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-149 View Gene Set 0.0003429 1883 0.007023 112 microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-149 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-214 View Gene Set 0.0003505 1354 0.007053 114 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-214 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-328 View Gene Set 0.0003485 872 0.007053 114 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-328 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-324-5p View Gene Set 0.0003768 1516 0.007516 116 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-324-5p from miRNAtargetUnion www.mirbase.org...
Null mirbase.pictar.targetscan.targetsUnion.hsa-miR-299-3p View Gene Set 0.0004388 810 0.008678 117 microRNA targets for mirbase.pictar.targetscan.targetsUnion.hsa-miR-299-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-328 View Gene Set 0.0004452 1394 0.00873 118 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-328 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-504 View Gene Set 0.0004781 1489 0.009296 119 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-504 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-214 View Gene Set 0.0005083 2823 0.009802 120 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-214 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-941 View Gene Set 0.0006012 992 0.0115 121 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-941 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-662 View Gene Set 0.0006292 984 0.01193 122 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-662 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-483-5p View Gene Set 0.0006937 1342 0.01296 123 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-483-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-671-3p View Gene Set 0.0006947 1092 0.01296 123 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-671-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-532-3p View Gene Set 0.0007103 1959 0.01315 125 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-532-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-920 View Gene Set 0.0007222 1935 0.01326 126 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-920 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-593 View Gene Set 0.0007621 1838 0.01378 127 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-593 from miRNAtargetUnion www.mirbase.org...
Null mirbase.pictar.targetscan.targetsUnion.hsa-miR-214 View Gene Set 0.0007604 1420 0.01378 127 microRNA targets for mirbase.pictar.targetscan.targetsUnion.hsa-miR-214 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-491-5p View Gene Set 0.0008066 1429 0.01436 129 microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-491-5p from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-485-5p View Gene Set 0.0008025 969 0.01436 129 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-485-5p from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-874 View Gene Set 0.0008213 975 0.01451 131 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-874 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-504 View Gene Set 0.000853 1464 0.01495 132 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-504 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-371-3p View Gene Set 0.0009088 1011 0.01581 133 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-371-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-361-3p View Gene Set 0.000938 2123 0.0162 134 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-361-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.pictar.targetscan.targetsUnion.hsa-miR-328 View Gene Set 0.000987 1435 0.01692 135 microRNA targets for miranda.pictar.targetscan.targetsUnion.hsa-miR-328 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-328 View Gene Set 0.001016 1458 0.01728 136 microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-328 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-574-3p View Gene Set 0.001105 1088 0.01867 137 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-574-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-671-5p View Gene Set 0.001209 2249 0.02027 138 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-671-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-647 View Gene Set 0.001305 1863 0.02169 139 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-647 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-339-5p View Gene Set 0.001312 954 0.02169 139 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-339-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-214 View Gene Set 0.001537 2872 0.02522 141 microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-214 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-299-3p View Gene Set 0.001595 880 0.02599 142 microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-299-3p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-542-5p View Gene Set 0.001655 1145 0.02659 143 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-542-5p from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.tarbase.targetsUnion.hsa-miR-34a View Gene Set 0.001653 2284 0.02659 143 microRNA targets for miranda.mirbase.tarbase.targetsUnion.hsa-miR-34a from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-524-3p View Gene Set 0.001766 1058 0.02818 145 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-524-3p from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-149 View Gene Set 0.001825 975 0.02892 146 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-149 from miRNAtargetUnion www.mirbase.org...
Null mirbase.pictar.targetscan.targetsUnion.hsa-miR-24 View Gene Set 0.001912 1215 0.0301 147 microRNA targets for mirbase.pictar.targetscan.targetsUnion.hsa-miR-24 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-210 View Gene Set 0.001951 732 0.03051 148 microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-210 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-525-3p View Gene Set 0.002034 1112 0.0316 149 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-525-3p from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-299-3p View Gene Set 0.002126 870 0.0328 150 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-299-3p from miRNAtargetUnion www.mirbase.org...
Null mirbase.pictar.targetscan.targetsUnion.hsa-miR-346 View Gene Set 0.002143 704 0.03284 151 microRNA targets for mirbase.pictar.targetscan.targetsUnion.hsa-miR-346 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-551a View Gene Set 0.00227 924 0.03455 152 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-551a from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-504 View Gene Set 0.002286 834 0.03458 153 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-504 from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-551a View Gene Set 0.002348 920 0.03528 154 microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-551a from miRNAtargetUnion www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-650 View Gene Set 0.002835 2314 0.04232 155 microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-650 from miRNAtargetUnion www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-551a View Gene Set 0.003038 687 0.04506 156 microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-551a from miRNAtargetUnion www.mirbase.org...

Gene Set Collection: hprdBatch.DOWN

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null Androgen Receptor Signaling Pathway View Gene Set 0.002801 161 0.02661 1 From NetPath for Androgen Receptor Signaling Pathway www.netpath.org...
Null IL-4 Signaling Pathway View Gene Set 0.001544 90 0.02661 1 From NetPath for IL-4 Signaling Pathway www.netpath.org...

Gene Set Collection: hprdManual.UP

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null IL1 View Gene Set 0.0005971 85 0.01433 1 From NetPath for IL1 www.netpath.org...

Gene Set Collection: hprdManual.DIFFERENT

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null IL1 View Gene Set 0.002815 120 0.03378 1 From NetPath for IL1 www.netpath.org...
Null Leptin View Gene Set 0.002221 110 0.03378 1 From NetPath for Leptin www.netpath.org...

Gene Set Collection: tfbsK3Z3

Arguments: refPop=all, featureType=ENTREZID, colname=WilcoxUP, ranks.only=TRUE, absolute=FALSE, alternative=up

Gene Set Name GeneSetDescription Value Gene Set Size Corrected Value Ranking Description URL
Null V_AP1_01 View Gene Set 7.47e-08 169 1.591e-05 1 List of genes containing a conserved (FDR < 0.1%) V$AP1_01 TFBS located within 3 kb around the TSS for the AP-1 transcription factor www.gene-regula...
Null V_NFE2_01 View Gene Set 1.37e-05 213 0.001459 2 List of genes containing a conserved (FDR < 0.1%) V$NFE2_01 TFBS located within 3 kb around the TSS for the NF-E2 transcription factor www.gene-regula...
Null V_PPARG_02 View Gene Set 2.409e-05 151 0.00171 3 List of genes containing a conserved (FDR < 0.1%) V$PPARG_02 TFBS located within 3 kb around the TSS for the PPAR-gamma1 transcription factor www.gene-regula...
Null V_PPARG_01 View Gene Set 9.556e-05 386 0.005088 4 List of genes containing a conserved (FDR < 0.1%) V$PPARG_01 TFBS located within 3 kb around the TSS for the PPAR-gamma1 transcription factor www.gene-regula...
Null V_ER_Q6 View Gene Set 0.000262 146 0.01116 5 List of genes containing a conserved (FDR < 0.1%) V$ER_Q6 TFBS located within 3 kb around the TSS for the ER-alpha transcription factor www.gene-regula...
Null V_COUP_01 View Gene Set 0.0005338 251 0.01895 6 List of genes containing a conserved (FDR < 0.1%) V$COUP_01 TFBS located within 3 kb around the TSS for the COUP-TF1 transcription factor www.gene-regula...
Null V_P53_01 View Gene Set 0.001117 145 0.02553 7 List of genes containing a conserved (FDR < 0.1%) V$P53_01 TFBS located within 3 kb around the TSS for the p53 transcription factor www.gene-regula...
Null V_PAX4_02 View Gene Set 0.001198 121 0.02553 7 List of genes containing a conserved (FDR < 0.1%) V$PAX4_02 TFBS located within 3 kb around the TSS for the Pax-4a transcription factor www.gene-regula...
Null V_PBX1_02 View Gene Set 0.001064 223 0.02553 7 List of genes containing a conserved (FDR < 0.1%) V$PBX1_02 TFBS located within 3 kb around the TSS for the Pbx1a transcription factor www.gene-regula...
Null V_ZIC1_01 View Gene Set 0.001111 99 0.02553 7 List of genes containing a conserved (FDR < 0.1%) V$ZIC1_01 TFBS located within 3 kb around the TSS for the Zic1 transcription factor www.gene-regula...
Null V_CART1_01 View Gene Set 0.002235 248 0.03663 11 List of genes containing a conserved (FDR < 0.1%) V$CART1_01 TFBS located within 3 kb around the TSS for the Cart-1 transcription factor www.gene-regula...
Null V_MSX1_01 View Gene Set 0.002147 65 0.03663 11 List of genes containing a conserved (FDR < 0.1%) V$MSX1_01 TFBS located within 3 kb around the TSS for the Msx-1 transcription factor www.gene-regula...
Null V_RFX1_02 View Gene Set 0.002106 364 0.03663 11 List of genes containing a conserved (FDR < 0.1%) V$RFX1_02 TFBS located within 3 kb around the TSS for the RFX1 transcription factor www.gene-regula...
Null V_FREAC2_01 View Gene Set 0.00255 227 0.03879 14 List of genes containing a conserved (FDR < 0.1%) V$FREAC2_01 TFBS located within 3 kb around the TSS for the FOXF2 transcription factor www.gene-regula...
Null V_FAC1_01 View Gene Set 0.003684 172 0.0436 15 List of genes containing a conserved (FDR < 0.1%) V$FAC1_01 TFBS located within 3 kb around the TSS for the FAC1 transcription factor www.gene-regula...
Null V_HNF1_01 View Gene Set 0.003538 185 0.0436 15 List of genes containing a conserved (FDR < 0.1%) V$HNF1_01 TFBS located within 3 kb around the TSS for the HNF-1A transcription factor www.gene-regula...
Null V_IRF7_01 View Gene Set 0.003353 163 0.0436 15 List of genes containing a conserved (FDR < 0.1%) V$IRF7_01 TFBS located within 3 kb around the TSS for the IRF-7A transcription factor www.gene-regula...
Null V_RSRFC4_01 View Gene Set 0.003131 394 0.0436 15 List of genes containing a conserved (FDR < 0.1%) V$RSRFC4_01 TFBS located within 3 kb around the TSS for the RSRFC4 transcription factor www.gene-regula...
Null V_LHX3_01 View Gene Set 0.003996 80 0.04479 19 List of genes containing a conserved (FDR < 0.1%) V$LHX3_01 TFBS located within 3 kb around the TSS for the LHX3a transcription factor www.gene-regula...
Null V_AREB6_03 View Gene Set 0.004727 68 0.04583 20 List of genes containing a conserved (FDR < 0.1%) V$AREB6_03 TFBS located within 3 kb around the TSS for the AREB6 transcription factor www.gene-regula...
Null V_HAND1E47_01 View Gene Set 0.004344 82 0.04583 20 List of genes containing a conserved (FDR < 0.1%) V$HAND1E47_01 TFBS located within 3 kb around the TSS for the E47 transcription factor www.gene-regula...
Null V_ZIC2_01 View Gene Set 0.004734 115 0.04583 20 List of genes containing a conserved (FDR < 0.1%) V$ZIC2_01 TFBS located within 3 kb around the TSS for the ZIC2 transcription factor www.gene-regula...