AFA results for: tVPAda2DU

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Go to: Gene Set Collection: tfbsK3Z3

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
KEGG 03040	View Gene Set	2.681e-10	128	5.737e-08	1	Spliceosome	www.genome.jp/d...
KEGG 04110	View Gene Set	2.17e-09	128	2.322e-07	2	Cell cycle	www.genome.jp/d...
KEGG 00240	View Gene Set	1.553e-07	99	1.108e-05	3	Pyrimidine metabolism	www.genome.jp/d...
KEGG 01100	View Gene Set	7.042e-07	1120	3.767e-05	4	Metabolic pathways	www.genome.jp/d...
KEGG 04141	View Gene Set	5.401e-06	167	0.0002312	5	Protein processing in endoplasmic reticulum	www.genome.jp/d...
KEGG 04145	View Gene Set	2.556e-05	158	0.0009116	6	Phagosome	www.genome.jp/d...
KEGG 03018	View Gene Set	0.000241	59	0.007369	7	RNA degradation	www.genome.jp/d...
KEGG 04612	View Gene Set	0.0003102	78	0.008298	8	Antigen processing and presentation	www.genome.jp/d...
KEGG 04120	View Gene Set	0.0003671	139	0.008728	9	Ubiquitin mediated proteolysis	www.genome.jp/d...
KEGG 00480	View Gene Set	0.0004613	50	0.009872	10	Glutathione metabolism	www.genome.jp/d...
KEGG 00330	View Gene Set	0.0007813	54	0.0152	11	Arginine and proline metabolism	www.genome.jp/d...
KEGG 04142	View Gene Set	0.0008842	121	0.01577	12	Lysosome	www.genome.jp/d...
KEGG 04114	View Gene Set	0.001029	114	0.01694	13	Oocyte meiosis	www.genome.jp/d...
KEGG 05222	View Gene Set	0.001179	84	0.01802	14	Small cell lung cancer	www.genome.jp/d...
KEGG 00520	View Gene Set	0.001413	45	0.02016	15	Amino sugar and nucleotide sugar metabolism	www.genome.jp/d...
KEGG 00970	View Gene Set	0.002106	41	0.02624	16	Aminoacyl-tRNA biosynthesis	www.genome.jp/d...
KEGG 03020	View Gene Set	0.002208	29	0.02624	16	RNA polymerase	www.genome.jp/d...
KEGG 03430	View Gene Set	0.001993	23	0.02624	16	Mismatch repair	www.genome.jp/d...
KEGG 03050	View Gene Set	0.002942	48	0.02861	19	Proteasome	www.genome.jp/d...
KEGG 03060	View Gene Set	0.002776	24	0.02861	19	Protein export	www.genome.jp/d...
KEGG 03410	View Gene Set	0.002626	34	0.02861	19	Base excision repair	www.genome.jp/d...
KEGG 04940	View Gene Set	0.00288	45	0.02861	19	Type I diabetes mellitus	www.genome.jp/d...
KEGG 03030	View Gene Set	0.003411	36	0.03174	23	DNA replication	www.genome.jp/d...
KEGG 04115	View Gene Set	0.004236	69	0.03777	24	p53 signaling pathway	www.genome.jp/d...
KEGG 03440	View Gene Set	0.004933	28	0.04223	25	Homologous recombination	www.genome.jp/d...
KEGG 03420	View Gene Set	0.005354	44	0.04406	26	Nucleotide excision repair	www.genome.jp/d...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
GO GO:0044424	View Gene Set	1.292e-63	10976	1.725e-59	1	intracellular part	amigo.geneontol...
GO GO:0005622	View Gene Set	7.722e-61	11329	5.158e-57	2	intracellular	amigo.geneontol...
GO GO:0043227	View Gene Set	7.811e-55	8383	3.478e-51	3	membrane-bounded organelle	amigo.geneontol...
GO GO:0043231	View Gene Set	2.06e-54	8376	6.882e-51	4	intracellular membrane-bounded organelle	amigo.geneontol...
GO GO:0043226	View Gene Set	9.519e-53	9360	2.12e-49	5	organelle	amigo.geneontol...
GO GO:0043229	View Gene Set	9.041e-53	9346	2.12e-49	5	intracellular organelle	amigo.geneontol...
GO GO:0044446	View Gene Set	2.638e-52	5019	5.035e-49	7	intracellular organelle part	amigo.geneontol...
GO GO:0044422	View Gene Set	2.24e-51	5089	3.741e-48	8	organelle part	amigo.geneontol...
GO GO:0005737	View Gene Set	4.687e-50	7676	6.958e-47	9	cytoplasm	amigo.geneontol...
GO GO:0044428	View Gene Set	2.114e-38	1938	2.824e-35	10	nuclear part	amigo.geneontol...
GO GO:0070013	View Gene Set	1.467e-37	1845	1.782e-34	11	intracellular organelle lumen	amigo.geneontol...
GO GO:0044444	View Gene Set	2.174e-37	5184	2.42e-34	12	cytoplasmic part	amigo.geneontol...
GO GO:0031974	View Gene Set	4.232e-37	1917	4.349e-34	13	membrane-enclosed lumen	amigo.geneontol...
GO GO:0043233	View Gene Set	1.567e-35	1881	1.495e-32	14	organelle lumen	amigo.geneontol...
GO GO:0031981	View Gene Set	1.527e-30	1518	1.36e-27	15	nuclear lumen	amigo.geneontol...
GO GO:0005739	View Gene Set	3.958e-27	1274	3.305e-24	16	mitochondrion	amigo.geneontol...
GO GO:0043228	View Gene Set	1.801e-26	2690	1.336e-23	17	non-membrane-bounded organelle	amigo.geneontol...
GO GO:0043232	View Gene Set	1.801e-26	2690	1.336e-23	17	intracellular non-membrane-bounded organelle	amigo.geneontol...
GO GO:0044237	View Gene Set	9.174e-24	7431	6.451e-21	19	cellular metabolic process	amigo.geneontol...
GO GO:0005634	View Gene Set	9.75e-24	5198	6.513e-21	20	nucleus	amigo.geneontol...
GO GO:0007049	View Gene Set	1.761e-22	1006	1.12e-19	21	cell cycle	amigo.geneontol...
GO GO:0032991	View Gene Set	1.151e-21	3237	6.989e-19	22	macromolecular complex	amigo.geneontol...
GO GO:0005730	View Gene Set	4.668e-21	734	2.711e-18	23	nucleolus	amigo.geneontol...
GO GO:0006396	View Gene Set	6.744e-21	578	3.754e-18	24	RNA processing	amigo.geneontol...
GO GO:0000278	View Gene Set	1.117e-20	489	5.972e-18	25	mitotic cell cycle	amigo.geneontol...
GO GO:0009987	View Gene Set	6.614e-20	11620	3.399e-17	26	cellular process	amigo.geneontol...
GO GO:0003723	View Gene Set	1.275e-19	732	6.306e-17	27	RNA binding	amigo.geneontol...
GO GO:0022402	View Gene Set	2.709e-19	676	1.293e-16	28	cell cycle process	amigo.geneontol...
GO GO:0005515	View Gene Set	2.872e-17	8146	1.323e-14	29	protein binding	amigo.geneontol...
GO GO:0005654	View Gene Set	3.573e-17	939	1.591e-14	30	nucleoplasm	amigo.geneontol...
GO GO:0008152	View Gene Set	4.186e-17	8439	1.804e-14	31	metabolic process	amigo.geneontol...
GO GO:0030529	View Gene Set	4.641e-17	504	1.938e-14	32	ribonucleoprotein complex	amigo.geneontol...
GO GO:0000280	View Gene Set	8.68e-17	276	3.411e-14	33	nuclear division	amigo.geneontol...
GO GO:0007067	View Gene Set	8.68e-17	276	3.411e-14	33	mitosis	amigo.geneontol...
GO GO:0048285	View Gene Set	2.37e-16	286	9.048e-14	35	organelle fission	amigo.geneontol...
GO GO:0000087	View Gene Set	1.56e-15	286	5.79e-13	36	M phase of mitotic cell cycle	amigo.geneontol...
GO GO:0044260	View Gene Set	1.61e-15	5699	5.813e-13	37	cellular macromolecule metabolic process	amigo.geneontol...
GO GO:0006996	View Gene Set	1.758e-15	1501	6.179e-13	38	organelle organization	amigo.geneontol...
GO GO:0051301	View Gene Set	2.068e-15	358	7.084e-13	39	cell division	amigo.geneontol...
GO GO:0022403	View Gene Set	3.064e-15	522	1.023e-12	40	cell cycle phase	amigo.geneontol...
GO GO:0016043	View Gene Set	4.803e-15	2937	1.565e-12	41	cellular component organization	amigo.geneontol...
GO GO:0008380	View Gene Set	5.138e-15	300	1.634e-12	42	RNA splicing	amigo.geneontol...
GO GO:0044238	View Gene Set	1.022e-14	7629	3.174e-12	43	primary metabolic process	amigo.geneontol...
GO GO:0044085	View Gene Set	2.337e-14	1167	7.096e-12	44	cellular component biogenesis	amigo.geneontol...
GO GO:0000279	View Gene Set	2.439e-14	406	7.241e-12	45	M phase	amigo.geneontol...
GO GO:0022613	View Gene Set	1.605e-13	194	4.565e-11	46	ribonucleoprotein complex biogenesis	amigo.geneontol...
GO GO:0031967	View Gene Set	1.606e-13	672	4.565e-11	46	organelle envelope	amigo.geneontol...
GO GO:0031975	View Gene Set	2.01e-13	685	5.595e-11	48	envelope	amigo.geneontol...
GO GO:0015630	View Gene Set	5.194e-13	587	1.416e-10	49	microtubule cytoskeleton	amigo.geneontol...
GO GO:0034641	View Gene Set	5.938e-13	4584	1.587e-10	50	cellular nitrogen compound metabolic process	amigo.geneontol...
GO GO:0043234	View Gene Set	8.204e-13	2680	2.149e-10	51	protein complex	amigo.geneontol...
GO GO:0044429	View Gene Set	9.91e-13	619	2.546e-10	52	mitochondrial part	amigo.geneontol...
GO GO:0006807	View Gene Set	1.666e-12	4698	4.2e-10	53	nitrogen compound metabolic process	amigo.geneontol...
GO GO:0000775	View Gene Set	1.87e-12	146	4.627e-10	54	chromosome centromeric region	amigo.geneontol...
GO GO:0005694	View Gene Set	2.436e-12	507	5.917e-10	55	chromosome	amigo.geneontol...
GO GO:0007059	View Gene Set	3.093e-12	94	7.378e-10	56	chromosome segregation	amigo.geneontol...
GO GO:0044464	View Gene Set	5.362e-12	15066	1.257e-09	57	cell part	amigo.geneontol...
GO GO:0005623	View Gene Set	5.993e-12	15067	1.38e-09	58	cell	amigo.geneontol...
GO GO:0005819	View Gene Set	8.12e-12	167	1.839e-09	59	spindle	amigo.geneontol...
GO GO:0016071	View Gene Set	8.327e-12	381	1.854e-09	60	mRNA metabolic process	amigo.geneontol...
GO GO:0042254	View Gene Set	9.746e-12	130	2.135e-09	61	ribosome biogenesis	amigo.geneontol...
GO GO:0006139	View Gene Set	1.443e-11	4294	3.109e-09	62	nucleobase nucleoside nucleotide and nucleic acid metabolic process	amigo.geneontol...
GO GO:0034470	View Gene Set	2.141e-11	193	4.541e-09	63	ncRNA processing	amigo.geneontol...
GO GO:0003824	View Gene Set	4.791e-11	5198	1e-08	64	catalytic activity	amigo.geneontol...
GO GO:0034660	View Gene Set	5.74e-11	236	1.18e-08	65	ncRNA metabolic process	amigo.geneontol...
GO GO:0006397	View Gene Set	9.186e-11	317	1.86e-08	66	mRNA processing	amigo.geneontol...
GO GO:0033036	View Gene Set	1.467e-10	1256	2.925e-08	67	macromolecule localization	amigo.geneontol...
GO GO:0090304	View Gene Set	1.697e-10	3724	3.334e-08	68	nucleic acid metabolic process	amigo.geneontol...
GO GO:0044427	View Gene Set	1.95e-10	420	3.775e-08	69	chromosomal part	amigo.geneontol...
GO GO:0043170	View Gene Set	2.086e-10	6274	3.981e-08	70	macromolecule metabolic process	amigo.geneontol...
GO GO:0000776	View Gene Set	2.28e-10	92	4.289e-08	71	kinetochore	amigo.geneontol...
GO GO:0006259	View Gene Set	2.733e-10	592	5.072e-08	72	DNA metabolic process	amigo.geneontol...
GO GO:0006364	View Gene Set	2.776e-10	97	5.08e-08	73	rRNA processing	amigo.geneontol...
GO GO:0016072	View Gene Set	3.669e-10	101	6.623e-08	74	rRNA metabolic process	amigo.geneontol...
GO GO:0005815	View Gene Set	4.53e-10	277	8.07e-08	75	microtubule organizing center	amigo.geneontol...
GO GO:0008104	View Gene Set	4.943e-10	1048	8.69e-08	76	protein localization	amigo.geneontol...
GO GO:0000793	View Gene Set	5.373e-10	136	9.322e-08	77	condensed chromosome	amigo.geneontol...
GO GO:0005829	View Gene Set	6.983e-10	1323	1.196e-07	78	cytosol	amigo.geneontol...
GO GO:0005681	View Gene Set	7.733e-10	135	1.308e-07	79	spliceosomal complex	amigo.geneontol...
GO GO:0000226	View Gene Set	8.811e-10	178	1.472e-07	80	microtubule cytoskeleton organization	amigo.geneontol...
GO GO:0031090	View Gene Set	2.174e-09	1905	3.585e-07	81	organelle membrane	amigo.geneontol...
GO GO:0044451	View Gene Set	2.777e-09	600	4.525e-07	82	nucleoplasm part	amigo.geneontol...
GO GO:0022607	View Gene Set	5.398e-09	1043	8.585e-07	83	cellular component assembly	amigo.geneontol...
GO GO:0065003	View Gene Set	5.347e-09	763	8.585e-07	83	macromolecular complex assembly	amigo.geneontol...
GO GO:0043933	View Gene Set	5.904e-09	836	9.279e-07	85	macromolecular complex subunit organization	amigo.geneontol...
GO GO:0007017	View Gene Set	6.101e-09	281	9.478e-07	86	microtubule-based process	amigo.geneontol...
GO GO:0000375	View Gene Set	6.58e-09	106	1.01e-06	87	RNA splicing via transesterification reactions	amigo.geneontol...
GO GO:0006281	View Gene Set	7.579e-09	309	1.151e-06	88	DNA repair	amigo.geneontol...
GO GO:0000779	View Gene Set	8.979e-09	79	1.348e-06	89	condensed chromosome centromeric region	amigo.geneontol...
GO GO:0046907	View Gene Set	1.235e-08	753	1.834e-06	90	intracellular transport	amigo.geneontol...
GO GO:0000166	View Gene Set	1.295e-08	2257	1.901e-06	91	nucleotide binding	amigo.geneontol...
GO GO:0043161	View Gene Set	1.473e-08	162	2.139e-06	92	proteasomal ubiquitin-dependent protein catabolic process	amigo.geneontol...
GO GO:0044267	View Gene Set	1.707e-08	2465	2.453e-06	93	cellular protein metabolic process	amigo.geneontol...
GO GO:0010498	View Gene Set	2.435e-08	166	3.439e-06	94	proteasomal protein catabolic process	amigo.geneontol...
GO GO:0016604	View Gene Set	2.446e-08	198	3.439e-06	94	nuclear body	amigo.geneontol...
GO GO:0000777	View Gene Set	2.768e-08	74	3.853e-06	96	condensed chromosome kinetochore	amigo.geneontol...
GO GO:0006974	View Gene Set	2.82e-08	412	3.885e-06	97	response to DNA damage stimulus	amigo.geneontol...
GO GO:0015031	View Gene Set	3.04e-08	888	4.145e-06	98	protein transport	amigo.geneontol...
GO GO:0045184	View Gene Set	4.465e-08	904	6.026e-06	99	establishment of protein localization	amigo.geneontol...
GO GO:0005740	View Gene Set	4.905e-08	444	6.553e-06	100	mitochondrial envelope	amigo.geneontol...
GO GO:0010467	View Gene Set	6.894e-08	3806	9.12e-06	101	gene expression	amigo.geneontol...
GO GO:0042611	View Gene Set	7.781e-08	36	1.019e-05	102	MHC protein complex	amigo.geneontol...
GO GO:0000377	View Gene Set	8.432e-08	97	1.083e-05	103	RNA splicing via transesterification reactions with bulged adenosine as nucleophile	amigo.geneontol...
GO GO:0000398	View Gene Set	8.432e-08	97	1.083e-05	103	nuclear mRNA splicing via spliceosome	amigo.geneontol...
GO GO:0003676	View Gene Set	1.047e-07	2979	1.332e-05	105	nucleic acid binding	amigo.geneontol...
GO GO:0006260	View Gene Set	1.291e-07	239	1.627e-05	106	DNA replication	amigo.geneontol...
GO GO:0034621	View Gene Set	1.811e-07	458	2.262e-05	107	cellular macromolecular complex subunit organization	amigo.geneontol...
GO GO:0051439	View Gene Set	1.859e-07	68	2.3e-05	108	regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle	amigo.geneontol...
GO GO:0051726	View Gene Set	2.827e-07	451	3.465e-05	109	regulation of cell cycle	amigo.geneontol...
GO GO:0031145	View Gene Set	3.029e-07	64	3.679e-05	110	anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	amigo.geneontol...
GO GO:0044430	View Gene Set	3.422e-07	979	4.118e-05	111	cytoskeletal part	amigo.geneontol...
GO GO:0006412	View Gene Set	3.913e-07	412	4.667e-05	112	translation	amigo.geneontol...
GO GO:0005488	View Gene Set	4.253e-07	12334	5.028e-05	113	binding	amigo.geneontol...
GO GO:0051436	View Gene Set	4.82e-07	62	5.649e-05	114	negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle	amigo.geneontol...
GO GO:0000922	View Gene Set	4.967e-07	63	5.77e-05	115	spindle pole	amigo.geneontol...
GO GO:0005635	View Gene Set	5.955e-07	234	6.859e-05	116	nuclear envelope	amigo.geneontol...
GO GO:0051276	View Gene Set	6.036e-07	548	6.892e-05	117	chromosome organization	amigo.geneontol...
GO GO:0031966	View Gene Set	7.687e-07	420	8.703e-05	118	mitochondrial membrane	amigo.geneontol...
GO GO:0005759	View Gene Set	8.321e-07	223	9.264e-05	119	mitochondrial matrix	amigo.geneontol...
GO GO:0031980	View Gene Set	8.321e-07	223	9.264e-05	119	mitochondrial lumen	amigo.geneontol...
GO GO:0005813	View Gene Set	9.094e-07	166	0.0001004	121	centrosome	amigo.geneontol...
GO GO:0044432	View Gene Set	9.979e-07	689	0.0001093	122	endoplasmic reticulum part	amigo.geneontol...
GO GO:0006461	View Gene Set	1.022e-06	595	0.0001102	123	protein complex assembly	amigo.geneontol...
GO GO:0070271	View Gene Set	1.022e-06	595	0.0001102	123	protein complex biogenesis	amigo.geneontol...
GO GO:0005783	View Gene Set	1.273e-06	1024	0.0001361	125	endoplasmic reticulum	amigo.geneontol...
GO GO:0005643	View Gene Set	1.301e-06	71	0.000138	126	nuclear pore	amigo.geneontol...
GO GO:0034622	View Gene Set	1.395e-06	393	0.0001467	127	cellular macromolecular complex assembly	amigo.geneontol...
GO GO:0032269	View Gene Set	1.449e-06	205	0.0001513	128	negative regulation of cellular protein metabolic process	amigo.geneontol...
GO GO:0051437	View Gene Set	1.539e-06	64	0.0001593	129	positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle	amigo.geneontol...
GO GO:0044419	View Gene Set	1.557e-06	343	0.0001601	130	interspecies interaction between organisms	amigo.geneontol...
GO GO:0051082	View Gene Set	1.583e-06	113	0.0001615	131	unfolded protein binding	amigo.geneontol...
GO GO:0019941	View Gene Set	1.707e-06	302	0.0001715	132	modification-dependent protein catabolic process	amigo.geneontol...
GO GO:0043632	View Gene Set	1.707e-06	302	0.0001715	132	modification-dependent macromolecule catabolic process	amigo.geneontol...
GO GO:0051351	View Gene Set	1.745e-06	74	0.0001739	134	positive regulation of ligase activity	amigo.geneontol...
GO GO:0007051	View Gene Set	2.338e-06	57	0.0002314	135	spindle organization	amigo.geneontol...
GO GO:0051603	View Gene Set	2.798e-06	346	0.0002748	136	proteolysis involved in cellular protein catabolic process	amigo.geneontol...
GO GO:0006511	View Gene Set	3.234e-06	296	0.0003153	137	ubiquitin-dependent protein catabolic process	amigo.geneontol...
GO GO:0044248	View Gene Set	3.974e-06	1005	0.0003847	138	cellular catabolic process	amigo.geneontol...
GO GO:0051443	View Gene Set	4.122e-06	71	0.0003962	139	positive regulation of ubiquitin-protein ligase activity	amigo.geneontol...
GO GO:0032446	View Gene Set	4.499e-06	310	0.0004293	140	protein modification by small protein conjugation	amigo.geneontol...
GO GO:0044257	View Gene Set	4.623e-06	349	0.0004381	141	cellular protein catabolic process	amigo.geneontol...
GO GO:0051248	View Gene Set	5.053e-06	218	0.0004754	142	negative regulation of protein metabolic process	amigo.geneontol...
GO GO:0032886	View Gene Set	5.362e-06	50	0.0005009	143	regulation of microtubule-based process	amigo.geneontol...
GO GO:0046930	View Gene Set	6.682e-06	85	0.0006199	144	pore complex	amigo.geneontol...
GO GO:0044265	View Gene Set	6.729e-06	479	0.00062	145	cellular macromolecule catabolic process	amigo.geneontol...
GO GO:0051352	View Gene Set	6.979e-06	66	0.0006343	146	negative regulation of ligase activity	amigo.geneontol...
GO GO:0051444	View Gene Set	6.979e-06	66	0.0006343	146	negative regulation of ubiquitin-protein ligase activity	amigo.geneontol...
GO GO:0005856	View Gene Set	7.98e-06	1410	0.0007204	148	cytoskeleton	amigo.geneontol...
GO GO:0033554	View Gene Set	8.182e-06	698	0.0007337	149	cellular response to stress	amigo.geneontol...
GO GO:0051340	View Gene Set	8.469e-06	85	0.0007543	150	regulation of ligase activity	amigo.geneontol...
GO GO:0016070	View Gene Set	9.144e-06	2596	0.000809	151	RNA metabolic process	amigo.geneontol...
GO GO:0005774	View Gene Set	9.704e-06	131	0.0008529	152	vacuolar membrane	amigo.geneontol...
GO GO:0030163	View Gene Set	1.042e-05	398	0.00091	153	protein catabolic process	amigo.geneontol...
GO GO:0051329	View Gene Set	1.069e-05	138	0.0009277	154	interphase of mitotic cell cycle	amigo.geneontol...
GO GO:0048471	View Gene Set	1.382e-05	330	0.001192	155	perinuclear region of cytoplasm	amigo.geneontol...
GO GO:0042175	View Gene Set	1.399e-05	637	0.001198	156	nuclear membrane-endoplasmic reticulum network	amigo.geneontol...
GO GO:0005789	View Gene Set	1.565e-05	622	0.001319	157	endoplasmic reticulum membrane	amigo.geneontol...
GO GO:0044437	View Gene Set	1.57e-05	138	0.001319	157	vacuolar part	amigo.geneontol...
GO GO:0043021	View Gene Set	1.551e-05	39	0.001319	157	ribonucleoprotein binding	amigo.geneontol...
GO GO:0000819	View Gene Set	1.646e-05	38	0.001374	160	sister chromatid segregation	amigo.geneontol...
GO GO:0012505	View Gene Set	1.695e-05	1454	0.001407	161	endomembrane system	amigo.geneontol...
GO GO:0031400	View Gene Set	1.707e-05	141	0.001408	162	negative regulation of protein modification process	amigo.geneontol...
GO GO:0031398	View Gene Set	1.805e-05	95	0.001479	163	positive regulation of protein ubiquitination	amigo.geneontol...
GO GO:0000070	View Gene Set	1.835e-05	37	0.001482	164	mitotic sister chromatid segregation	amigo.geneontol...
GO GO:0030433	View Gene Set	1.844e-05	27	0.001482	164	ER-associated protein catabolic process	amigo.geneontol...
GO GO:0051325	View Gene Set	1.85e-05	147	0.001482	164	interphase	amigo.geneontol...
GO GO:0005773	View Gene Set	1.853e-05	286	0.001482	164	vacuole	amigo.geneontol...
GO GO:0051438	View Gene Set	1.885e-05	82	0.001499	168	regulation of ubiquitin-protein ligase activity	amigo.geneontol...
GO GO:0071212	View Gene Set	2.006e-05	723	0.001586	169	subsynaptic reticulum	amigo.geneontol...
GO GO:0070727	View Gene Set	2.9e-05	503	0.002279	170	cellular macromolecule localization	amigo.geneontol...
GO GO:0019882	View Gene Set	2.983e-05	62	0.002331	171	antigen processing and presentation	amigo.geneontol...
GO GO:0015030	View Gene Set	3.101e-05	43	0.002409	172	Cajal body	amigo.geneontol...
GO GO:0005743	View Gene Set	3.25e-05	305	0.00251	173	mitochondrial inner membrane	amigo.geneontol...
GO GO:0034613	View Gene Set	3.495e-05	501	0.002683	174	cellular protein localization	amigo.geneontol...
GO GO:0050657	View Gene Set	3.754e-05	102	0.002833	175	nucleic acid transport	amigo.geneontol...
GO GO:0050658	View Gene Set	3.754e-05	102	0.002833	175	RNA transport	amigo.geneontol...
GO GO:0051236	View Gene Set	3.754e-05	102	0.002833	175	establishment of RNA localization	amigo.geneontol...
GO GO:0006886	View Gene Set	3.914e-05	439	0.002922	178	intracellular protein transport	amigo.geneontol...
GO GO:0070647	View Gene Set	3.937e-05	356	0.002922	178	protein modification by small protein conjugation or removal	amigo.geneontol...
GO GO:0017111	View Gene Set	3.919e-05	733	0.002922	178	nucleoside-triphosphatase activity	amigo.geneontol...
GO GO:0042612	View Gene Set	3.991e-05	22	0.002946	181	MHC class I protein complex	amigo.geneontol...
GO GO:0016607	View Gene Set	4.243e-05	116	0.003115	182	nuclear speck	amigo.geneontol...
GO GO:0006457	View Gene Set	4.269e-05	172	0.003116	183	protein folding	amigo.geneontol...
GO GO:0019538	View Gene Set	4.327e-05	2935	0.003142	184	protein metabolic process	amigo.geneontol...
GO GO:0000502	View Gene Set	4.456e-05	63	0.003218	185	proteasome complex	amigo.geneontol...
GO GO:0019866	View Gene Set	4.744e-05	334	0.003408	186	organelle inner membrane	amigo.geneontol...
GO GO:0006399	View Gene Set	4.949e-05	118	0.003536	187	tRNA metabolic process	amigo.geneontol...
GO GO:0016567	View Gene Set	5.164e-05	286	0.00367	188	protein ubiquitination	amigo.geneontol...
GO GO:0006403	View Gene Set	5.669e-05	104	0.004007	189	RNA localization	amigo.geneontol...
GO GO:0044249	View Gene Set	5.749e-05	4326	0.004043	190	cellular biosynthetic process	amigo.geneontol...
GO GO:0048193	View Gene Set	5.919e-05	137	0.00414	191	Golgi vesicle transport	amigo.geneontol...
GO GO:0044281	View Gene Set	6.203e-05	1698	0.004316	192	small molecule metabolic process	amigo.geneontol...
GO GO:0022618	View Gene Set	6.644e-05	76	0.004599	193	ribonucleoprotein complex assembly	amigo.geneontol...
GO GO:0031023	View Gene Set	7.211e-05	41	0.004966	194	microtubule organizing center organization	amigo.geneontol...
GO GO:0031396	View Gene Set	7.25e-05	121	0.004967	195	regulation of protein ubiquitination	amigo.geneontol...
GO GO:0009056	View Gene Set	7.686e-05	1255	0.005236	196	catabolic process	amigo.geneontol...
GO GO:0016874	View Gene Set	7.721e-05	436	0.005236	196	ligase activity	amigo.geneontol...
GO GO:0005874	View Gene Set	7.79e-05	284	0.005256	198	microtubule	amigo.geneontol...
GO GO:0070507	View Gene Set	7.86e-05	43	0.005277	199	regulation of microtubule cytoskeleton organization	amigo.geneontol...
GO GO:0016818	View Gene Set	8.937e-05	765	0.00597	200	hydrolase activity acting on acid anhydrides in phosphorus-containing anhydrides	amigo.geneontol...

Gene Set Collection: Broad.c2.CGP

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Broad CAIRO_HEPATOBLASTOMA_CLASSES_UP	View Gene Set	2.928e-61	577	7.003e-58	1	Genes up-regulated in robust Cluster 2 (rC2) of hepatoblastoma samples compared to those in the robust Cluster 1 (rC1).	www.broad.mit.e...
Broad KINSEY_TARGETS_OF_EWSR1_FLII_FUSION_UP	View Gene Set	2.224e-56	1180	2.66e-53	2	Genes up-regulated in TC71 and EWS502 cells (Ewing's sarcoma) upon knockdown of the EWSR1-FLII fusion [Gene ID=2130 2314].	www.broad.mit.e...
Broad DODD_NASOPHARYNGEAL_CARCINOMA_DN	View Gene Set	1.384e-53	1253	1.104e-50	3	Genes down-regulated in nasopharyngeal carcinoma (NPC) compared to the normal tissue.	www.broad.mit.e...
Broad DIAZ_CHRONIC_MEYLOGENOUS_LEUKEMIA_UP	View Gene Set	4.537e-50	1353	2.713e-47	4	Genes up-regulated in CD34+ [Gene ID=947] cells isolated from bone marrow of CML (chronic myelogenous leukemia) patients compared to those from normal donors.	www.broad.mit.e...
Broad PUJANA_CHEK2_PCC_NETWORK	View Gene Set	5.033e-46	744	2.408e-43	5	Genes constituting the CHEK2-PCC network of transcripts whose expression positively correlates (Pearson correlation coefficient PCC >= 0.4) with that of CHEK2 [Gene ID=11200].	www.broad.mit.e...
Broad NUYTTEN_EZH2_TARGETS_DN	View Gene Set	1.29e-43	859	5.142e-41	6	Genes down-regulated in PC3 cells (prostate cancer) after knockdown of EZH2 [Gene ID=2146] by RNAi.	www.broad.mit.e...
Broad CASORELLI_ACUTE_PROMYELOCYTIC_LEUKEMIA_DN	View Gene Set	2.475e-39	639	7.5e-37	7	Genes down-regulated in APL (acute promyeolocytic leukemia) blasts expressing PML-RARA fusion [Gene ID=5371 5914] compared to normal promyeloblasts.	www.broad.mit.e...
Broad TIEN_INTESTINE_PROBIOTICS_24HR_UP	View Gene Set	2.508e-39	537	7.5e-37	7	Genes up-regulated in Caco-2 cells (intestinal epithelium) after coculture with the probiotic bacteria L. casei for 24h.	www.broad.mit.e...
Broad PUJANA_BRCA1_PCC_NETWORK	View Gene Set	1.506e-37	1582	4.003e-35	9	Genes constituting the BRCA1-PCC network of transcripts whose expression positively correlated (Pearson correlation coefficient PCC >= 0.4) with that of BRCA1 [Gene ID=672] across a compendium of normal tissues.	www.broad.mit.e...
Broad KRIGE_RESPONSE_TO_TOSEDOSTAT_24HR_DN	View Gene Set	2.454e-37	920	5.87e-35	10	Genes down-regulated in HL-60 cells (acute promyelocytic leukemia APL) after treatment with the aminopeptidase inhibitor tosedostat (CHR-2797) [PubChem=15547703] for 24 h.	www.broad.mit.e...
Broad BERENJENO_TRANSFORMED_BY_RHOA_UP	View Gene Set	9.442e-37	485	2.053e-34	11	Genes up-regulated in NIH3T3 cells (fibroblasts) transformed by expression of contitutively active (Q63L) form of RHOA [Gene ID=387] off plasmid vector.	www.broad.mit.e...
Broad NUYTTEN_EZH2_TARGETS_UP	View Gene Set	8.437e-34	944	1.682e-31	12	Genes up-regulated in PC3 cells (prostate cancer) after knockdown of EZH2 [Gene ID=2146] by RNAi.	www.broad.mit.e...
Broad KRIGE_RESPONSE_TO_TOSEDOSTAT_6HR_DN	View Gene Set	1.265e-33	832	2.327e-31	13	Genes down-regulated in HL-60 cells (acute promyelocytic leukemia APL) after treatment with the aminopeptidase inhibitor tosedostat (CHR-2797) [PubChem=15547703] for 6 h.	www.broad.mit.e...
Broad KOBAYASHI_EGFR_SIGNALING_24HR_DN	View Gene Set	3.247e-31	243	5.548e-29	14	Genes down-regulated in H1975 cells (non-small cell lung cancer NSCLC) resistant to gefitinib [PubChem=123631] after treatment with EGFR inhibitor CL-387785 [PubChem=2776] for 24h.	www.broad.mit.e...
Broad BASAKI_YBX1_TARGETS_UP	View Gene Set	1.217e-30	279	1.94e-28	15	Genes up-regulated in SKOC-3 cells (ovarian cancer) after YB-1 (YBX1) [Gene ID=4904] knockdown by RNAi.	www.broad.mit.e...
Broad RODRIGUES_THYROID_CARCINOMA_POORLY_DIFFERENTIATED_UP	View Gene Set	1.374e-30	589	2.054e-28	16	Genes up-regulated in poorly differentiated thyroid carcinoma (PDTC) compared to normal thyroid tissue.	www.broad.mit.e...
Broad WEI_MYCN_TARGETS_WITH_E_BOX	View Gene Set	2.222e-29	757	3.099e-27	17	Genes whose promoters contain E-box motifs and whose expression changed in MYCN-3 cells (neuroblastoma) upon induction of MYCN [Gene ID=4613].	www.broad.mit.e...
Broad MANALO_HYPOXIA_DN	View Gene Set	2.332e-29	276	3.099e-27	17	Genes down-regulated in response to both hypoxia and overexpression of an active form of HIF1A [Gene ID=3091].	www.broad.mit.e...
Broad BLUM_RESPONSE_TO_SALIRASIB_DN	View Gene Set	8.281e-29	332	1.042e-26	19	Selected genes down-regulated in response to the Ras inhibitor salirasib [PubChem=5469318] in a panel of cancer cell lines with constantly active HRAS [Gene ID=3265].	www.broad.mit.e...
Broad VECCHI_GASTRIC_CANCER_EARLY_UP	View Gene Set	8.418e-28	408	1.007e-25	20	Up-regulated genes distinguishing between early gastric cancer (EGC) and normal tissue samples.	www.broad.mit.e...
Broad SHEDDEN_LUNG_CANCER_POOR_SURVIVAL_A6	View Gene Set	1.134e-27	435	1.291e-25	21	Cluster 6 of method A: up-regulation of these genes in patients with non???small cell lung cancer (NSCLC) predicts poor survival outcome.	www.broad.mit.e...
Broad WONG_EMBRYONIC_STEM_CELL_CORE	View Gene Set	9.213e-27	331	1.002e-24	22	The 'core ESC-like gene module': genes coordinately up-regulated in a compendium of mouse embryonic stem cells (ESC) which are shared with the human ESC-like module.	www.broad.mit.e...
Broad BLALOCK_ALZHEIMERS_DISEASE_DN	View Gene Set	4.674e-26	1209	4.861e-24	23	Genes down-regulated in brain from patients with Alzheimer's disease.	www.broad.mit.e...
Broad MUELLER_PLURINET	View Gene Set	5.422e-26	294	5.404e-24	24	Genes constituting the PluriNet protein-protein network shared by the pluripotent cells (embryonic stem cells embryonical carcinomas and induced pluripotent cells).	www.broad.mit.e...
Broad DANG_BOUND_BY_MYC	View Gene Set	2.265e-25	1045	2.167e-23	25	Genes whose promoters are bound by MYC [Gene ID=4609] according to MYC Target Gene Database.	www.broad.mit.e...
Broad BENPORATH_CYCLING_GENES	View Gene Set	2.499e-25	630	2.299e-23	26	Genes showing cell-cycle stage-specific expression [PMID=12058064].	www.broad.mit.e...
Broad NUYTTEN_NIPP1_TARGETS_DN	View Gene Set	4.021e-25	758	3.562e-23	27	Genes down-regulated in PC3 cells (prostate cancer) after knockdown of NIPP1 [Gene ID=5511] by RNAi.	www.broad.mit.e...
Broad ROSTY_CERVICAL_CANCER_PROLIFERATION_CLUSTER	View Gene Set	3.762e-24	138	3.214e-22	28	The 'Cervical Cancer Proliferation Cluster' (CCPC): genes whose expression in cervical carcinoma positively correlates with that of the HPV E6 and E7 oncogenes; they are also differentially expressed according to disease outcome.	www.broad.mit.e...
Broad ACEVEDO_LIVER_TUMOR_VS_NORMAL_ADJACENT_TISSUE_UP	View Gene Set	6.348e-24	806	5.236e-22	29	Genes up-regulated in liver tumor compared to the normal adjacent tissue.	www.broad.mit.e...
Broad SOTIRIOU_BREAST_CANCER_GRADE_1_VS_3_UP	View Gene Set	1.233e-23	143	9.828e-22	30	Up-regulated genes whose expression correlated with histologic grade of invasive breast cancer tumors: comparison of grade 1 vs grade 3.	www.broad.mit.e...
Broad NUYTTEN_NIPP1_TARGETS_UP	View Gene Set	3.474e-23	657	2.681e-21	31	Genes up-regulated in PC3 cells (prostate cancer) after knockdown of NIPP1 [Gene ID=5511] by RNAi.	www.broad.mit.e...
Broad RHEIN_ALL_GLUCOCORTICOID_THERAPY_DN	View Gene Set	6.06e-23	351	4.53e-21	32	Genes down-regulated in ALL (acute lymphoblastic leukemia) blasts after 1 week of treatment with glucocorticoids.	www.broad.mit.e...
Broad LINDGREN_BLADDER_CANCER_CLUSTER_1_DN	View Gene Set	1.591e-22	368	1.153e-20	33	Genes whose expression profile is specific to Custer I of urothelial cell carcinoma (UCC) tumors.	www.broad.mit.e...
Broad FOURNIER_ACINAR_DEVELOPMENT_LATE_2	View Gene Set	2.755e-22	265	1.938e-20	34	Genes identified by method 2 as coordinately down-regulated late in HMEC cells (mammary epithelium) during acinar development in vitro.	www.broad.mit.e...
Broad ACEVEDO_LIVER_CANCER_UP	View Gene Set	1.023e-21	915	6.991e-20	35	Genes up-regulated in hepatocellular carcinoma (HCC) compared to normal liver samples.	www.broad.mit.e...
Broad REN_ALVEOLAR_RHABDOMYOSARCOMA_DN	View Gene Set	1.061e-21	402	7.051e-20	36	Genes commonly down-regulated in human alveolar rhabdomyosarcoma (ARMS) and its mouse model overexpressing PAX3-FOXO1 [Gene ID=5077 2308] fusion.	www.broad.mit.e...
Broad ONKEN_UVEAL_MELANOMA_UP	View Gene Set	1.525e-21	739	9.639e-20	37	Genes up-regulated in uveal melanoma: class 2 vs class 1 tumors.	www.broad.mit.e...
Broad RODRIGUES_THYROID_CARCINOMA_ANAPLASTIC_UP	View Gene Set	1.531e-21	681	9.639e-20	37	Genes up-regulated in anaplastic thyroid carcinoma (ATC) compared to normal thyroid tissue.	www.broad.mit.e...
Broad FLECHNER_BIOPSY_KIDNEY_TRANSPLANT_OK_VS_DONOR_UP	View Gene Set	2.975e-21	532	1.825e-19	39	Genes diffierentially expressed in kidney biopsies from patients with well functioning kidneys more than 1-year post transplant compared to the biopsies from normal living kidney donors.	www.broad.mit.e...
Broad MITSIADES_RESPONSE_TO_APLIDIN_DN	View Gene Set	4.174e-21	241	2.496e-19	40	Genes down-regulated in the MM1S cells (multiple myeloma) after treatment with aplidin [PubChem=44152164] a marine-derived compound with potential anti-cancer properties.	www.broad.mit.e...
Broad PUJANA_BRCA2_PCC_NETWORK	View Gene Set	4.507e-20	410	2.629e-18	41	Genes constituting the BRCA2-PCC network of transcripts whose expression positively correlated (Pearson correlation coefficient PCC >= 0.4) with that of BRCA2 [Gene ID=675] across a compendium of normal tissues.	www.broad.mit.e...
Broad GRAHAM_CML_DIVIDING_VS_NORMAL_QUIESCENT_UP	View Gene Set	6.165e-20	180	3.511e-18	42	Genes up-regulated in quiescent CD34+ [Gene ID=8842] cells isolated from peripheral blood of normal donors compared to the dividing cells from CML (chronic myeloid leukemia) patients.	www.broad.mit.e...
Broad HORIUCHI_WTAP_TARGETS_DN	View Gene Set	3.081e-19	289	1.714e-17	43	Genes down-regulated in primary endothelial cells (HUVEC) after knockdown of WTAP [Gene ID=9589] by RNAi.	www.broad.mit.e...
Broad LINDGREN_BLADDER_CANCER_CLUSTER_3_UP	View Gene Set	3.377e-19	314	1.836e-17	44	Genes whose expression profile is specific to Cluster III of urothelial cell carcinoma (UCC) tumors.	www.broad.mit.e...
Broad BUYTAERT_PHOTODYNAMIC_THERAPY_STRESS_DN	View Gene Set	3.777e-19	599	2.008e-17	45	Genes down-regulated in T24 (bladder cancer) cells in response to the photodynamic therapy (PDT) stress.	www.broad.mit.e...
Broad BOYAULT_LIVER_CANCER_SUBCLASS_G3_UP	View Gene Set	6.926e-19	184	3.602e-17	46	Up-regulated genes in hepatocellular carcinoma (HCC) subclass G3 defined by unsupervised clustering.	www.broad.mit.e...
Broad HAMAI_APOPTOSIS_VIA_TRAIL_UP	View Gene Set	1.288e-18	328	6.553e-17	47	Genes up-regulated in T1 cells (primary melanoma sensitive to TRAIL [Gene ID=8743]) compared to G1 cells (metastatic melanoma resistant to TRAIL).	www.broad.mit.e...
Broad KIM_WT1_TARGETS_DN	View Gene Set	1.794e-18	431	8.941e-17	48	Genes down-regulated in UB27 cells (osteosarcoma) at any time point after inducing the expression of a mutant form of WT1 [Gene ID=7490].	www.broad.mit.e...
Broad ENK_UV_RESPONSE_KERATINOCYTE_DN	View Gene Set	2.21e-18	475	1.079e-16	49	Genes down-regulated in NHEK cells (normal epidermal keratinocytes) after UVB irradiation.	www.broad.mit.e...
Broad DACOSTA_UV_RESPONSE_VIA_ERCC3_DN	View Gene Set	2.382e-18	825	1.14e-16	50	Genes down-regulated in fibroblasts expressing mutant forms of ERCC3 [Gene ID=2071] after UV irradiation.	www.broad.mit.e...
Broad GARY_CD5_TARGETS_DN	View Gene Set	7.474e-18	415	3.505e-16	51	Genes down-regulated in Daudi cells (B lymphocytes) stably expressing CD5 [Gene ID=921] off a plasmid vector.	www.broad.mit.e...
Broad BENPORATH_NANOG_TARGETS	View Gene Set	8.779e-18	946	4.038e-16	52	Set 'Nanog targets': genes upregulated and identified by ChIP on chip as Nanog [Gene ID=79923] transcription factor targets in human embryonic stem cells.	www.broad.mit.e...
Broad GEORGES_TARGETS_OF_MIR192_AND_MIR215	View Gene Set	1.473e-17	809	6.65e-16	53	Genes down-regulated in HCT116 cells (colon cancer) by expression of MIR192 or MIR215 [Gene ID=406967 406997] at 24 h.	www.broad.mit.e...
Broad GOLDRATH_ANTIGEN_RESPONSE	View Gene Set	2.062e-17	315	9.132e-16	54	Genes up-regulated at the peak of an antigen response of naive CD8+ [Gene ID=925 926] T-cells.	www.broad.mit.e...
Broad TARTE_PLASMA_CELL_VS_PLASMABLAST_DN	View Gene Set	2.732e-17	303	1.188e-15	55	Genes down-regulated in mature plasma cells compared with plasmablastic B lymphocytes.	www.broad.mit.e...
Broad CROONQUIST_IL6_DEPRIVATION_DN	View Gene Set	3.391e-17	80	1.449e-15	56	Genes down-regulated in the ANBL-6 cell line (multiple myeloma MM) after withdrawal of IL6 [Gene ID=3569].	www.broad.mit.e...
Broad BUYTAERT_PHOTODYNAMIC_THERAPY_STRESS_UP	View Gene Set	6.025e-17	783	2.528e-15	57	Genes up-regulated in T24 (bladder cancer) cells in response to the photodynamic therapy (PDT) stress.	www.broad.mit.e...
Broad BENPORATH_MYC_MAX_TARGETS	View Gene Set	8.208e-17	768	3.385e-15	58	Set 'Myc targets2': targets of c-Myc [Gene ID=4609] and Max [Gene ID=4149] identified by ChIP on chip in a Burkitt???s lymphoma cell line; overlap set.	www.broad.mit.e...
Broad WEST_ADRENOCORTICAL_TUMOR_UP	View Gene Set	1.443e-16	283	5.852e-15	59	Up-regulated genes in pediatric adrenocortical tumors (ACT) compared to the normal tissue.	www.broad.mit.e...
Broad HELLER_HDAC_TARGETS_SILENCED_BY_METHYLATION_UP	View Gene Set	2.056e-16	399	8.198e-15	60	Genes up-regulated in multiple myeloma (MM) cell lines treated with both decitabine [PubChem=451668] TSA [PubChem=5562].	www.broad.mit.e...
Broad FERREIRA_EWINGS_SARCOMA_UNSTABLE_VS_STABLE_UP	View Gene Set	2.998e-16	144	1.176e-14	61	Genes up-regulated in genomically unstable Ewing's sarcoma tumors compared to the stable ones.	www.broad.mit.e...
Broad WINNEPENNINCKX_MELANOMA_METASTASIS_UP	View Gene Set	5.768e-16	152	2.225e-14	62	Genes from the 254-gene classifier which were up-regulated in melanoma patients with a reported distant metastasis within 4 years.	www.broad.mit.e...
Broad SCHLOSSER_SERUM_RESPONSE_DN	View Gene Set	7.508e-16	666	2.809e-14	63	Cluster 4: genes down-regulated in B493-6 cells (B lymphocytes) upon serum stimulation but not affected by MYC [Gene ID=4609].	www.broad.mit.e...
Broad CROONQUIST_NRAS_SIGNALING_DN	View Gene Set	7.516e-16	62	2.809e-14	63	Genes down-regulated in ANBL-6 cell line (multiple myeloma MM) expressing a constantly active form of NRAS [Gene ID=4893] off a plasmid vector compared to those grown in the presence of IL6 [Gene ID=3569].	www.broad.mit.e...
Broad FLECHNER_BIOPSY_KIDNEY_TRANSPLANT_REJECTED_VS_OK_DN	View Gene Set	7.948e-16	532	2.925e-14	65	Genes differentially expressed in kidney biopsies from patients with acute transplant rejection compared to the biopsies from patients with well functioning kidneys more than 1-year post transplant.	www.broad.mit.e...
Broad BLALOCK_ALZHEIMERS_DISEASE_UP	View Gene Set	8.871e-16	1641	3.215e-14	66	Genes up-regulated in brain from patients with Alzheimer's disease.	www.broad.mit.e...
Broad SPIELMAN_LYMPHOBLAST_EUROPEAN_VS_ASIAN_DN	View Gene Set	5.51e-15	571	1.967e-13	67	Genes down-regulated in lymphoblastoid cells from the European population compared to those from the Asian population.	www.broad.mit.e...
Broad CREIGHTON_ENDOCRINE_THERAPY_RESISTANCE_1	View Gene Set	6.893e-15	491	2.425e-13	68	The 'group 1 set' of genes associated with acquired endocrine therapy resistance in breast tumors expressing ESR1 and ERBB2 [Gene ID=2099 2064].	www.broad.mit.e...
Broad MARKEY_RB1_ACUTE_LOF_DN	View Gene Set	8.429e-15	201	2.905e-13	69	Genes down-regulated in adult fibroblasts with inactivated RB1 [Gene ID=5925] by Cre-lox: acute loss of function (LOF) of RB1.	www.broad.mit.e...
Broad BILD_MYC_ONCOGENIC_SIGNATURE	View Gene Set	8.501e-15	187	2.905e-13	69	Genes selected in supervised analyses to discriminate cells expressing c-Myc [Gene ID=4609] from control cells expressing GFP.	www.broad.mit.e...
Broad WANG_SMARCE1_TARGETS_DN	View Gene Set	8.743e-15	329	2.945e-13	71	Genes down-regulated in BT549 cells (breast cancer) by expression of SMARCE1 [Gene ID=6605] off a retroviral vector.	www.broad.mit.e...
Broad CHARAFE_BREAST_CANCER_LUMINAL_VS_BASAL_DN	View Gene Set	1.067e-14	437	3.546e-13	72	Genes down-regulated in luminal-like breast cancer cell lines compared to the basal-like ones.	www.broad.mit.e...
Broad ZHANG_BREAST_CANCER_PROGENITORS_UP	View Gene Set	1.16e-14	370	3.801e-13	73	Genes changed in cancer stem cells isolated from mammary tumors compared to the non-tumorigenic cells.	www.broad.mit.e...
Broad KRIGE_RESPONSE_TO_TOSEDOSTAT_6HR_UP	View Gene Set	1.323e-14	869	4.276e-13	74	Genes up-regulated in HL-60 cells (acute promyelocytic leukemia APL) after treatment with the aminopeptidase inhibitor tosedostat (CHR-2797) [PubChem=15547703] for 6 h.	www.broad.mit.e...
Broad BORCZUK_MALIGNANT_MESOTHELIOMA_UP	View Gene Set	1.559e-14	290	4.971e-13	75	Genes up-regulated in biphasic (mixed) vs epithelial subtypes of malignant peritoneal mesothelioma.	www.broad.mit.e...
Broad FUJII_YBX1_TARGETS_DN	View Gene Set	2.41e-14	139	7.584e-13	76	Genes down-regulated in MCF-7 cells (breast cancer) after knockdown of YBX1 [Gene ID=4904] by RNAi.	www.broad.mit.e...
Broad PUJANA_XPRSS_INT_NETWORK	View Gene Set	2.569e-14	164	7.981e-13	77	Genes constituting the XPRSS-Int network: intersection of genes whose expression correlates with BRCA1 BRCA2 ATM and CHEK2 [Gene ID=672 675 472 11200] in a compendium of normal tissues.	www.broad.mit.e...
Broad BENPORATH_PROLIFERATION	View Gene Set	3.893e-14	140	1.194e-12	78	Set 'Proliferation Cluster': genes defined in human breast tumor expression data.	www.broad.mit.e...
Broad HOFFMANN_LARGE_TO_SMALL_PRE_BII_LYMPHOCYTE_UP	View Gene Set	3.962e-14	93	1.2e-12	79	Genes up-regulated during differentiation from large pre-BII to small pre-BII lymphocyte.	www.broad.mit.e...
Broad CHARAFE_BREAST_CANCER_LUMINAL_VS_MESENCHYMAL_DN	View Gene Set	4.533e-14	444	1.355e-12	80	Genes down-regulated in luminal-like breast cancer cell lines compared to the mesenchymal-like ones.	www.broad.mit.e...
Broad BIDUS_METASTASIS_UP	View Gene Set	5.503e-14	203	1.605e-12	81	Genes up-regulated in endometroid endometrial tumors from patients with lymph node metastases compared to those without the metastases.	www.broad.mit.e...
Broad LE_EGR2_TARGETS_UP	View Gene Set	5.467e-14	100	1.605e-12	81	Genes up-regulated in P14 nerves of transgenic mice having hypomorhic (reduced function) allele of EGR2 [Gene ID=1959].	www.broad.mit.e...
Broad NAKAMURA_TUMOR_ZONE_PERIPHERAL_VS_CENTRAL_DN	View Gene Set	6.221e-14	583	1.793e-12	83	Down-regulated genes in peripheral zone of human pancreatic cancer growing in the pancreas of nude mice compared to that of the tumor from the central zone.	www.broad.mit.e...
Broad BERENJENO_TRANSFORMED_BY_RHOA_DN	View Gene Set	7.141e-14	353	2.034e-12	84	Genes down-regulated in NIH3T3 cells (fibroblasts) transformed by expression of contitutively active (Q63L) form of RHOA [Gene ID=387] off plasmid vector.	www.broad.mit.e...
Broad LOPEZ_MBD_TARGETS	View Gene Set	9.194e-14	855	2.587e-12	85	Genes up-regulated in HeLa cells (cervical cancer) after simultaneus knockdown of all three MBD (methyl-CpG binding domain) proteins MeCP2 MBD1 and MBD2 [Gene ID=4204 4152 8932] by RNAi.	www.broad.mit.e...
Broad GRADE_COLON_CANCER_UP	View Gene Set	1.062e-13	711	2.954e-12	86	Up-regulated genes in colon carcinoma tumors compared to the matched normal mucosa samples.	www.broad.mit.e...
Broad SHEN_SMARCA2_TARGETS_UP	View Gene Set	1.346e-13	406	3.7e-12	87	Genes whose expression positively correlated with that of SMARCA2 [Gene ID=6595] in prostate cancer samples.	www.broad.mit.e...
Broad HELLER_HDAC_TARGETS_UP	View Gene Set	1.604e-13	268	4.359e-12	88	Genes up-regulated in at least one of three multiple myeloma (MM) cell lines by TSA [PubChem=5562].	www.broad.mit.e...
Broad MONNIER_POSTRADIATION_TUMOR_ESCAPE_UP	View Gene Set	2.784e-13	359	7.481e-12	89	The postradiation tumor escape signature: genes up-regulated in tumors from irradiated stroma vs those from non-irradiated stroma.	www.broad.mit.e...
Broad ENK_UV_RESPONSE_KERATINOCYTE_UP	View Gene Set	3.314e-13	517	8.808e-12	90	Genes up-regulated in NHEK cells (normal epidermal keratinocytes) after UVB irradiation.	www.broad.mit.e...
Broad DOUGLAS_BMI1_TARGETS_UP	View Gene Set	4.973e-13	497	1.307e-11	91	Genes up-regulated in A4573 cells (Ewing's sarcoma ESFT) after knockdown of BMI1 [Gene ID=648] by RNAi.	www.broad.mit.e...
Broad MISSIAGLIA_REGULATED_BY_METHYLATION_DN	View Gene Set	7.509e-13	96	1.952e-11	92	Genes down-regulated in PaCa44 and CFPAC1 cells (pancreatic cancer) after treatment with decitabine [PubChem=451668] a DNA hypomethylating agent similar to azacitidine [PubChem=9444].	www.broad.mit.e...
Broad STEIN_ESRRA_TARGETS	View Gene Set	1.627e-12	508	4.184e-11	93	Genes regulated by ESRRA [Gene ID=2101] in MCF-7 cells (breast cancer).	www.broad.mit.e...
Broad ENK_UV_RESPONSE_EPIDERMIS_DN	View Gene Set	1.7e-12	504	4.327e-11	94	Genes down-regulated in epidermis after to UVB irradiation.	www.broad.mit.e...
Broad YAO_TEMPORAL_RESPONSE_TO_PROGESTERONE_CLUSTER_11	View Gene Set	2.65e-12	93	6.672e-11	95	Genes co-regulated in uterus during a time course response to progesterone [PubChem=5994]: SOM cluster 11.	www.broad.mit.e...
Broad WHITEFORD_PEDIATRIC_CANCER_MARKERS	View Gene Set	3.642e-12	92	9.075e-11	96	Differentially expressed genes in a panel of xenografts representing 8 common pediatric tumors compared to the normal tissues.	www.broad.mit.e...
Broad WANG_LMO4_TARGETS_DN	View Gene Set	3.789e-12	327	9.343e-11	97	Genes down-regulated in MCF7 cells (breast cancer) engineered to conditionally express LMO4 [Gene ID=8543] by a Tet Off system.	www.broad.mit.e...
Broad WU_CELL_MIGRATION	View Gene Set	5.052e-12	182	1.221e-10	98	Genes associated with migration rate of 40 human bladder cancer cells.	www.broad.mit.e...
Broad ONDER_CDH1_TARGETS_2_DN	View Gene Set	5.038e-12	453	1.221e-10	98	Genes down-regulated in HMLE cells (immortalized nontransformed mammary epithelium) after E-cadhedrin (CDH1) [Gene ID=999] knockdown by RNAi.	www.broad.mit.e...
Broad CHIANG_LIVER_CANCER_SUBCLASS_UNANNOTATED_DN	View Gene Set	5.533e-12	155	1.323e-10	100	Marker genes down-regulated in the 'unannotated' subclass of hepatocellular carcinoma (HCC) samples.	www.broad.mit.e...
Broad KANG_DOXORUBICIN_RESISTANCE_UP	View Gene Set	5.611e-12	53	1.329e-10	101	Genes differentialy expressed in gastric cancer cell lines: doxorubicin [PubChem=31703] resistant vs sensitive.	www.broad.mit.e...
Broad PUJANA_BRCA_CENTERED_NETWORK	View Gene Set	5.697e-12	92	1.336e-10	102	Genes constituting the BRCA-centered network (BCN).	www.broad.mit.e...
Broad BENPORATH_SOX2_TARGETS	View Gene Set	6.296e-12	704	1.462e-10	103	Set 'Sox2 targets': genes upregulated and identified by ChIP on chip as SOX2 [Gene ID=6657] transcription factor targets in human embryonic stem cells.	www.broad.mit.e...
Broad DANG_MYC_TARGETS_UP	View Gene Set	6.408e-12	127	1.474e-10	104	Genes up-regulated by MYC [Gene ID=4609] and whose promoters are bound by MYC according to MYC Target Gene Database.	www.broad.mit.e...
Broad PAL_PRMT5_TARGETS_UP	View Gene Set	7.999e-12	178	1.822e-10	105	Genes up-regulated in NIH-3T3 cells (fibroblast) after knockdown of PRMT5 [Gene ID=10419] by RNAi.	www.broad.mit.e...
Broad SPIELMAN_LYMPHOBLAST_EUROPEAN_VS_ASIAN_UP	View Gene Set	1.019e-11	469	2.3e-10	106	Genes up-regulated in lymphoblastoid cells from the European population compared to those from the Asian population.	www.broad.mit.e...
Broad MOOTHA_HUMAN_MITODB_6_2002	View Gene Set	1.144e-11	420	2.558e-10	107	Mitochondrial genes; based on literature and sequence annotation resources and converted to Affymetrix HG-U133A probe sets.	www.broad.mit.e...
Broad GRADE_COLON_AND_RECTAL_CANCER_UP	View Gene Set	1.555e-11	213	3.445e-10	108	Up-regulated genes in both rectal and colon carcinoma compared to normal mucosa samples.	www.broad.mit.e...
Broad RODRIGUES_THYROID_CARCINOMA_POORLY_DIFFERENTIATED_DN	View Gene Set	1.957e-11	732	4.295e-10	109	Genes down-regulated in poorly differentiated thyroid carcinoma (PDTC) compared to normal thyroid tissue.	www.broad.mit.e...
Broad RUIZ_TNC_TARGETS_DN	View Gene Set	2.081e-11	138	4.526e-10	110	Genes down-regulated in T98G cells (glioblastoma) by TNC [Gene ID=3371].	www.broad.mit.e...
Broad BENPORATH_ES_1	View Gene Set	2.245e-11	367	4.837e-10	111	Set 'ES exp1': genes overexpressed in human embryonic stem cells according to 5 or more out of 20 profiling studies.	www.broad.mit.e...
Broad LIAO_METASTASIS	View Gene Set	2.635e-11	513	5.627e-10	112	Genes up-regulated in the samples with intrahepatic metastatic hepatocellular carcinoma (HCC) vs primary HCC.	www.broad.mit.e...
Broad BILD_HRAS_ONCOGENIC_SIGNATURE	View Gene Set	2.764e-11	248	5.852e-10	113	Genes selected in supervised analyses to discriminate cells expressing activated HRAS [Gene ID=3265] oncogene from control cells expressing GFP.	www.broad.mit.e...
Broad DACOSTA_UV_RESPONSE_VIA_ERCC3_UP	View Gene Set	2.8e-11	301	5.875e-10	114	Genes up-regulated in fibroblasts expressing mutant forms of ERCC3 [Gene ID=2071] after UV irradiation.	www.broad.mit.e...
Broad KIM_WT1_TARGETS_12HR_DN	View Gene Set	3.087e-11	200	6.421e-10	115	Genes down-regulated in UB27 cells (osteosarcoma) at 12 hr after inducing the expression of a mutated form of WT1 [Gene ID=7490].	www.broad.mit.e...
Broad WELCSH_BRCA1_TARGETS_1_UP	View Gene Set	3.118e-11	171	6.429e-10	116	Upregulated by induction of exogenous BRCA1 in EcR-293 cells	www.broad.mit.e...
Broad PENG_GLUTAMINE_DEPRIVATION_DN	View Gene Set	6.042e-11	84	1.235e-09	117	Genes down-regulated in BJAB cells (B-lymphoma) after glutamine [PubChem=738] deprivation.	www.broad.mit.e...
Broad MOHANKUMAR_TLX1_TARGETS_UP	View Gene Set	6.824e-11	388	1.383e-09	118	Up-regulated in MCF7 cells (breast cancer) by TLX1 (HOX11) [Gene ID=3195].	www.broad.mit.e...
Broad TONKS_TARGETS_OF_RUNX1_RUNX1T1_FUSION_MONOCYTE_UP	View Gene Set	8.067e-11	195	1.621e-09	119	Genes up-regulated in monocytes by RUNX1-RUNX1T1 [Gene ID=861 862] fusion.	www.broad.mit.e...
Broad BASSO_B_LYMPHOCYTE_NETWORK	View Gene Set	8.47e-11	136	1.688e-09	120	Genes which comprise the top 1% of highly interconnected genes (major hubs) that account for most of gene interactions in the reconstructed regulatory networks from expression profiles in B lymphocytes.	www.broad.mit.e...
Broad SENESE_HDAC1_TARGETS_UP	View Gene Set	8.946e-11	427	1.768e-09	121	Genes up-regulated in U2OS cells (osteosarcoma) upon knockdown of HDAC1 [Gene ID=3065] by RNAi.	www.broad.mit.e...
Broad MOOTHA_MITOCHONDRIA	View Gene Set	1.059e-10	433	2.075e-09	122	Mitochondrial genes	www.broad.mit.e...
Broad ONKEN_UVEAL_MELANOMA_DN	View Gene Set	1.086e-10	509	2.111e-09	123	Genes down-regulated in uveal melanoma: class 2 vs class 1 tumors.	www.broad.mit.e...
Broad LEE_EARLY_T_LYMPHOCYTE_UP	View Gene Set	1.103e-10	80	2.128e-09	124	Genes up-regulated at early stages of progenitor T lymphocyte maturation compared to the late stages.	www.broad.mit.e...
Broad YAO_TEMPORAL_RESPONSE_TO_PROGESTERONE_CLUSTER_17	View Gene Set	2.476e-10	165	4.739e-09	125	Genes co-regulated in uterus during a time course response to progesterone [PubChem=5994]: SOM cluster 17.	www.broad.mit.e...
Broad GRUETZMANN_PANCREATIC_CANCER_UP	View Gene Set	2.506e-10	345	4.757e-09	126	Genes up-regulated in pancreatic ductal adenocarcinoma (PDAC) identified in a meta analysis across four independent studies.	www.broad.mit.e...
Broad LI_WILMS_TUMOR_VS_FETAL_KIDNEY_1_DN	View Gene Set	2.682e-10	158	5.051e-09	127	Genes down-regulated in Wilm's tumor samples compared to fetal kidney.	www.broad.mit.e...
Broad GRAHAM_NORMAL_QUIESCENT_VS_NORMAL_DIVIDING_DN	View Gene Set	2.836e-10	86	5.301e-09	128	Genes down-regulated in quiescent vs dividing CD34+ [Gene ID=8842] cells isolated from peripheral blood of normal donors.	www.broad.mit.e...
Broad RUTELLA_RESPONSE_TO_HGF_UP	View Gene Set	3.003e-10	409	5.569e-09	129	Genes up-regulated in peripheral blood monocytes by HGF [Gene ID=3082].	www.broad.mit.e...
Broad SENGUPTA_NASOPHARYNGEAL_CARCINOMA_UP	View Gene Set	3.358e-10	269	6.131e-09	130	Genes up-regulated in nsopharyngeal carcinoma relative to the normal tissue.	www.broad.mit.e...
Broad LI_WILMS_TUMOR_VS_FETAL_KIDNEY_1_UP	View Gene Set	3.334e-10	178	6.131e-09	130	Genes up-regulated in Wilm's tumor samples compared to fetal kidney.	www.broad.mit.e...
Broad ALCALAY_AML_BY_NPM1_LOCALIZATION_DN	View Gene Set	4.277e-10	179	7.75e-09	132	Genes changed in acute myeloid leukemia (AML) with respect to cellular localization of NPM1 [Gene ID=4869]: cytoplasmic vs. nucleolar.	www.broad.mit.e...
Broad NAKAMURA_TUMOR_ZONE_PERIPHERAL_VS_CENTRAL_UP	View Gene Set	4.804e-10	263	8.64e-09	133	Up-regulated genes in peripheral zone of human pancreatic cancer growing in the pancreas of nude mice compared to that of the tumor from the central zone.	www.broad.mit.e...
Broad DACOSTA_UV_RESPONSE_VIA_ERCC3_COMMON_DN	View Gene Set	5.914e-10	418	1.056e-08	134	Common down-regulated transcripts in fibroblasts expressing either XP/CS or TDD mutant forms of ERCC3 [Gene ID=2071] after UVC irradiation.	www.broad.mit.e...
Broad BLUM_RESPONSE_TO_SALIRASIB_UP	View Gene Set	6.158e-10	240	1.091e-08	135	Selected genes up-regulated in response to the Ras inhibitor salirasib [PubChem=5469318] in a panel of cancer cell lines with constantly active HRAS [Gene ID=3265].	www.broad.mit.e...
Broad CAIRO_HEPATOBLASTOMA_UP	View Gene Set	6.461e-10	200	1.136e-08	136	Genes up-regulated in hepatoblastoma samples compared to normal liver tissue.	www.broad.mit.e...
Broad PUJANA_ATM_PCC_NETWORK	View Gene Set	7.685e-10	1375	1.342e-08	137	Genes constituting the ATM-PCC network of transcripts whose expression positively correlated (Pearson correlation coefficient PCC >= 0.4) with that of ATM [Gene ID=472] across a compendium of normal tissues.	www.broad.mit.e...
Broad MORI_LARGE_PRE_BII_LYMPHOCYTE_UP	View Gene Set	8.516e-10	52	1.476e-08	138	Up-regulated genes in the B lymphocyte developmental signature based on expression profiling of lymphomas from the Emu-myc transgenic mice: the Large Pre-BII stage.	www.broad.mit.e...
Broad RHODES_UNDIFFERENTIATED_CANCER	View Gene Set	1.023e-09	60	1.76e-08	139	Genes commonly up-regulated in undifferentiated cancer relative to well-differentiated cancer based on the meta-analysis of the OncoMine gene expression database.	www.broad.mit.e...
Broad MORI_IMMATURE_B_LYMPHOCYTE_DN	View Gene Set	1.236e-09	52	2.111e-08	140	Down-regulated genes in the B lymphocyte developmental signature based on expression profiling of lymphomas from the Emu-myc transgenic mice: the immature B stage.	www.broad.mit.e...
Broad HSIAO_HOUSEKEEPING_GENES	View Gene Set	1.283e-09	384	2.177e-08	141	Housekeeping genes identified as expressed across 19 normal tissues.	www.broad.mit.e...
Broad FURUKAWA_DUSP6_TARGETS_PCI35_DN	View Gene Set	1.369e-09	66	2.307e-08	142	Genes down-regulated in PCI-35 cells (pancreatic cancer lack endogenous DUSP6 [Gene ID=1848]) upon expression of DUSP6 off an adenoviral vector.	www.broad.mit.e...
Broad PODAR_RESPONSE_TO_ADAPHOSTIN_UP	View Gene Set	1.386e-09	140	2.318e-08	143	Up-regulated genes in MM1.S cells (multiple myeloma) treated with adaphostin [PubChem=387042] a tyrosine kinase inhibitor with anticancer properties.	www.broad.mit.e...
Broad WELCSH_BRCA1_TARGETS_1_DN	View Gene Set	1.435e-09	124	2.384e-08	144	Upregulated by induction of exogenous BRCA1 in EcR-293 cells	www.broad.mit.e...
Broad SASAKI_ADULT_T_CELL_LEUKEMIA	View Gene Set	1.673e-09	137	2.722e-08	145	Genes up-regulated in adult T-cell leukemia (ATL) cells compared to T lymphocytes from healthy controls.	www.broad.mit.e...
Broad MONNIER_POSTRADIATION_TUMOR_ESCAPE_DN	View Gene Set	1.664e-09	317	2.722e-08	145	The postradiation tumor escape signature: genes down-regulated in tumors from irradiated stroma vs those from non-irradiated stroma.	www.broad.mit.e...
Broad YAO_TEMPORAL_RESPONSE_TO_PROGESTERONE_CLUSTER_14	View Gene Set	1.672e-09	131	2.722e-08	145	Genes co-regulated in uterus during a time course response to progesterone [PubChem=5994]: SOM cluster 14.	www.broad.mit.e...
Broad CHIANG_LIVER_CANCER_SUBCLASS_PROLIFERATION_UP	View Gene Set	1.782e-09	135	2.88e-08	148	Top 200 marker genes up-regulated in the 'proliferation' subclass of hepatocellular carcinoma (HCC); characterized by increased proliferation high levels of serum AFP [Gene ID=174] and chromosomal instability.	www.broad.mit.e...
Broad MILI_PSEUDOPODIA_HAPTOTAXIS_UP	View Gene Set	2.102e-09	452	3.375e-08	149	Transcripts enriched in pseudopodia of NIH/3T3 cells (fibroblast) in response to haptotactic migratory stimulus by fibronectin FN1 [Gene ID=2335].	www.broad.mit.e...
Broad SCIBETTA_KDM5B_TARGETS_DN	View Gene Set	2.174e-09	76	3.466e-08	150	Genes down-regulated in HB2 cells (mammary epithelium) upon expression of KDM5B [Gene ID=10765] off an adenoviral vector.	www.broad.mit.e...
Broad STEIN_ESRRA_TARGETS_UP	View Gene Set	2.727e-09	368	4.321e-08	151	Genes up-regulated by ESRRA [Gene ID=2101] only.	www.broad.mit.e...
Broad LIU_CMYB_TARGETS_UP	View Gene Set	3.591e-09	158	5.652e-08	152	Genes up-regulated in MCF-7 cells (breast cancer) by overexpression of CMYB [Gene ID=4602] off adenovirus vector.	www.broad.mit.e...
Broad CREIGHTON_ENDOCRINE_THERAPY_RESISTANCE_5	View Gene Set	3.695e-09	446	5.777e-08	153	The 'group 5 set' of genes associated with acquired endocrine therapy resistance in breast tumors expressing ESR1 but not ERBB2 [Gene ID=2099 2064].	www.broad.mit.e...
Broad SHIPP_DLBCL_VS_FOLLICULAR_LYMPHOMA_UP	View Gene Set	4.032e-09	45	6.263e-08	154	Top 50 up-regulated markers distinguishing diffuse large B-cell lymphoma (DLBCL) from follicular lymphoma (FL) samples.	www.broad.mit.e...
Broad CREIGHTON_ENDOCRINE_THERAPY_RESISTANCE_3	View Gene Set	4.142e-09	681	6.382e-08	155	The 'group 3 set' of genes associated with acquired endocrine therapy resistance in breast tumors expressing ESR1 and ERBB2 [Gene ID=2099 2064].	www.broad.mit.e...
Broad MOOTHA_PGC	View Gene Set	4.162e-09	329	6.382e-08	155	Genes up-regulated in differentiating C2C12 cells (myoblasts) upon expression of PPARGC1A [Gene ID=10891] off an adenoviral vector.	www.broad.mit.e...
Broad CHEMNITZ_RESPONSE_TO_PROSTAGLANDIN_E2_UP	View Gene Set	4.293e-09	135	6.54e-08	157	Genes up-regulated in CD4+ [Gene ID=920] T lymphocytes after stimulation with prostaglandin E2 [PubChem=5280360].	www.broad.mit.e...
Broad SCHLOSSER_MYC_TARGETS_REPRESSED_BY_SERUM	View Gene Set	4.945e-09	154	7.487e-08	158	Cluster 7: genes up-regulated in B493-6 cells (B lymphocytes) by MYC [Gene ID=4609] and down-regulated by the combination of MYC and serum.	www.broad.mit.e...
Broad TOYOTA_TARGETS_OF_MIR34B_AND_MIR34C	View Gene Set	5.288e-09	436	7.956e-08	159	Genes down-regulated in HCT116 cells (colon cancer) upon expression of MIR34B or MIR34C [Gene ID=407041 407042] microRNAs.	www.broad.mit.e...
Broad DOANE_RESPONSE_TO_ANDROGEN_DN	View Gene Set	5.559e-09	235	8.311e-08	160	Genes down-regulated in MDA-MB-453 cells (class A ER(-) [Gene ID=2099] breast cancer) after exposure to the androgen R1881 [PubChem=13766].	www.broad.mit.e...
Broad ENK_UV_RESPONSE_EPIDERMIS_UP	View Gene Set	6.114e-09	283	9.083e-08	161	Genes up-regulated in epidermis after to UVB irradiation.	www.broad.mit.e...
Broad JIANG_HYPOXIA_NORMAL	View Gene Set	6.572e-09	213	9.703e-08	162	Genes up-regulated in RPTEC cells (normal kidney) by hypoxia.	www.broad.mit.e...
Broad GOLDRATH_HOMEOSTATIC_PROLIFERATION	View Gene Set	6.738e-09	154	9.887e-08	163	Up-regulated in CD8+ [Gene ID=925] T lymphocytes undergoing homeostatic proliferation (HP) versus the naive cells; these genes are not up-regulated versus effector or memory cell population.	www.broad.mit.e...
Broad ZHANG_RESPONSE_TO_CANTHARIDIN_DN	View Gene Set	7.58e-09	60	1.106e-07	164	Genes down-regulated in HL-60 cells (promyeloid leukemia) by cantharidin [PubChem=6708701].	www.broad.mit.e...
Broad STARK_PREFRONTAL_CORTEX_22Q11_DELETION_DN	View Gene Set	7.74e-09	437	1.122e-07	165	Genes down-regulated in prefrontal cortex (PFC) of mice carrying a hemizygotic microdeletion in the 22q11.2 region.	www.broad.mit.e...
Broad RUTELLA_RESPONSE_TO_CSF2RB_AND_IL4_UP	View Gene Set	8.044e-09	331	1.159e-07	166	Genes up-regulated in peripheral blood monocytes by CSF2RB (GM-CSF) [Gene ID=1437] and IL4 [Gene ID=3565].	www.broad.mit.e...
Broad RAMALHO_STEMNESS_UP	View Gene Set	8.406e-09	192	1.204e-07	167	Genes enriched in embryonic neural and hematopoietic stem cells.	www.broad.mit.e...
Broad WONG_MITOCHONDRIA_GENE_MODULE	View Gene Set	8.891e-09	208	1.266e-07	168	Genes that comprise the mitochondria gene module	www.broad.mit.e...
Broad ELVIDGE_HIF1A_AND_HIF2A_TARGETS_DN	View Gene Set	1.213e-08	100	1.717e-07	169	Genes down-regulated in MCF7 cells (breast cancer) after knockdown of both HIF1A and HIF2A [Gene ID=3091 2034] by RNAi.	www.broad.mit.e...
Broad FARMER_BREAST_CANCER_BASAL_VS_LULMINAL	View Gene Set	1.223e-08	317	1.721e-07	170	Genes which best discriminated between two groups of breast cancer according to the status of ESR1 and AR [Gene ID=2099 367]: basal (ESR1- AR-) and luminal (ESR1+ AR+).	www.broad.mit.e...
Broad DAIRKEE_TERT_TARGETS_UP	View Gene Set	1.25e-08	317	1.749e-07	171	Genes up-regulated in non-spontaneously immortalizing (NSI) primary breast cancer tumor cultures upon expression of TERT [Gene ID=7015] off a retroviral vector.	www.broad.mit.e...
Broad RUTELLA_RESPONSE_TO_HGF_VS_CSF2RB_AND_IL4_UP	View Gene Set	1.463e-08	394	2.034e-07	172	Genes up-regulated in peripheral blood mononucleocytes by HGF [Gene ID=3082] compared to those regulated by CSF2RB (GM-CSF) [Gene ID=1437] and IL4 [Gene ID=3565].	www.broad.mit.e...
Broad WANG_CLIM2_TARGETS_DN	View Gene Set	1.486e-08	166	2.055e-07	173	Genes down-regulated in MCF7 cells (breast cancer) engineered to conditionally express a dominant negative form of CLIM2 [Gene ID=8861] by a Tet Off system.	www.broad.mit.e...
Broad CHANG_CORE_SERUM_RESPONSE_UP	View Gene Set	1.611e-08	66	2.214e-07	174	Up-regulated genes in the canonical gene expression signature of the fibroblast core serum response (CSR) defined by the Stanford group.	www.broad.mit.e...
Broad SENESE_HDAC3_TARGETS_DN	View Gene Set	1.629e-08	487	2.226e-07	175	Genes down-regulated in U2OS cells (osteosarcoma) upon knockdown of HDAC3 [Gene ID=8841] by RNAi.	www.broad.mit.e...
Broad REN_BOUND_BY_E2F	View Gene Set	1.644e-08	47	2.234e-07	176	Genes whose promoters were bound by E2F1 [Gene ID=1869] and E2F4 [Gene ID=1874] in the primary fibroblasts WI-38 by ChIP on chip assay.	www.broad.mit.e...
Broad PUIFFE_INVASION_INHIBITED_BY_ASCITES_UP	View Gene Set	1.687e-08	78	2.28e-07	177	Genes up-regulated in OV-90 cells (ovarian cancer) exposed to ascites which inhibited invasion.	www.broad.mit.e...
Broad KAN_RESPONSE_TO_ARSENIC_TRIOXIDE	View Gene Set	1.782e-08	117	2.395e-07	178	Genes changed in U373-MG cells (malignant glioma) upon treatment with arsenic trioxide [PubChem=14888] a chemical that can cause autophagic cell death.	www.broad.mit.e...
Broad HAN_SATB1_TARGETS_DN	View Gene Set	1.859e-08	320	2.484e-07	179	Genes down-regulated in MDA-MB-231 cells (breast cancer) after knockdown of SATB1 [Gene ID=6304] by RNAi.	www.broad.mit.e...
Broad BASAKI_YBX1_TARGETS_DN	View Gene Set	2.178e-08	356	2.895e-07	180	Genes down-regulated in SKOC-3 cells (ovarian cancer) after YB-1 (YBX1) [Gene ID=4904] knockdown by RNAi.	www.broad.mit.e...
Broad RODRIGUES_THYROID_CARCINOMA_ANAPLASTIC_DN	View Gene Set	2.27e-08	485	2.953e-07	181	Genes down-regulated in anaplastic thyroid carcinoma (ATC) compared to normal thyroid tissue.	www.broad.mit.e...
Broad OUELLET_OVARIAN_CANCER_INVASIVE_VS_LMP_UP	View Gene Set	2.271e-08	114	2.953e-07	181	Genes up-regulated in epithelial ovarian cancer (EOC) biopsies: invasive (TOV) vs low malignant potential (LMP) tumors.	www.broad.mit.e...
Broad KAUFFMANN_MELANOMA_RELAPSE_UP	View Gene Set	2.267e-08	57	2.953e-07	181	DNA repair and replication genes up-regulated in melanoma patients who will relapse vs patients who will not.	www.broad.mit.e...
Broad KRIGE_RESPONSE_TO_TOSEDOSTAT_24HR_UP	View Gene Set	2.266e-08	716	2.953e-07	181	Genes up-regulated in HL-60 cells (acute promyelocytic leukemia APL) after treatment with the aminopeptidase inhibitor tosedostat (CHR-2797) [PubChem=15547703] for 24 h.	www.broad.mit.e...
Broad HAHTOLA_MYCOSIS_FUNGOIDES_CD4_DN	View Gene Set	2.404e-08	111	3.108e-07	185	Genes down-regulated in T helper cells (defines as CD4+) isolated from patients with mucosis fungoides compared to those from normal control donors.	www.broad.mit.e...
Broad ODONNELL_TARGETS_OF_MYC_AND_TFRC_DN	View Gene Set	2.723e-08	42	3.502e-07	186	Genes down-regulated in P493-6 cells (B lymphocyte) by MYC [Gene ID=4609] and up-regulated by RNAi knockdown of TFRC [Gene ID=7037].	www.broad.mit.e...
Broad PASQUALUCCI_LYMPHOMA_BY_GC_STAGE_UP	View Gene Set	2.81e-08	257	3.595e-07	187	Genes up-regulated in post-GC BCL6 [Gene ID=604] dependent B cell non-Hodgkin's lymphoma (B-NHL) vs MYC [Gene ID=4609] driven pre-GC lymphoma; GC = germinal center.	www.broad.mit.e...
Broad KAUFFMANN_DNA_REPAIR_GENES	View Gene Set	2.831e-08	205	3.602e-07	188	Genes involved in DNA repair compiled manually by the authors.	www.broad.mit.e...
Broad DAIRKEE_CANCER_PRONE_RESPONSE_BPA_E2	View Gene Set	2.854e-08	111	3.612e-07	189	'Cancer prone response profile' (CPRP): genes common to estradiol and bisphenol A [PubChem=5757 6623] response of epithelial cell cultures from patients at high risk of breast cancer.	www.broad.mit.e...
Broad LANDIS_ERBB2_BREAST_TUMORS_324_UP	View Gene Set	2.981e-08	132	3.753e-07	190	The 324 genes identified by two analytical methods as changed in the mammary tumors induced by transgenic expression of ERBB2 [Gene ID=2064].	www.broad.mit.e...
Broad BHATI_G2M_ARREST_BY_2METHOXYESTRADIOL_UP	View Gene Set	3.198e-08	116	4.006e-07	191	Up-regulated genes in MDA-MB-435 cells (breast cancer) undergoing G2/M arrest after treatment with 2-methoxyestradiol (2ME2)[PubChem=1573].	www.broad.mit.e...
Broad UDAYAKUMAR_MED1_TARGETS_UP	View Gene Set	3.396e-08	129	4.187e-07	192	Genes up-regulated in HeLa cells after knockdown of MED1 [Gene ID=5469] by RNAi.	www.broad.mit.e...
Broad TIEN_INTESTINE_PROBIOTICS_6HR_DN	View Gene Set	3.389e-08	160	4.187e-07	192	Genes down-regulated in Caco-2 cells (intestinal epithelium) after coculture with the probiotic bacteria L. casei for 6h.	www.broad.mit.e...
Broad KAAB_FAILED_HEART_ATRIUM_DN	View Gene Set	3.366e-08	139	4.187e-07	192	Genes down-regulated in atria of failing hearts (DCM and ICM) compared to healthy controls.	www.broad.mit.e...
Broad MOLENAAR_TARGETS_OF_CCND1_AND_CDK4_DN	View Gene Set	3.493e-08	53	4.285e-07	195	Genes commonly down-regulated in SK-N-BE cells (neuroblastoma) after RNAi knockdown of CCND1 and CDK4 [Gene ID=595 1019].	www.broad.mit.e...
Broad FRASOR_RESPONSE_TO_SERM_OR_FULVESTRANT_DN	View Gene Set	3.825e-08	43	4.669e-07	196	Genes down-regulated in MCF-7 cells (breast cancer) by selective estrogen receptor modulators (SERM) 4-hydroxytamoxifen raloxifene or ICI 182780 but not by estradiol [PubChem=44959 5035 3478439 5757].	www.broad.mit.e...
Broad ELVIDGE_HYPOXIA_UP	View Gene Set	4.106e-08	163	4.985e-07	197	Genes up-regulated in MCF7 cells (breast cancer) under hypoxia conditions.	www.broad.mit.e...
Broad SWEET_LUNG_CANCER_KRAS_UP	View Gene Set	4.17e-08	436	5.038e-07	198	Genes up-regulated in the mouse lung cancer model with mutated KRAS [Gene ID=3845].	www.broad.mit.e...
Broad ACEVEDO_LIVER_CANCER_DN	View Gene Set	4.599e-08	516	5.528e-07	199	Genes down-regulated in hepatocellular carcinoma (HCC) compared to normal liver samples.	www.broad.mit.e...
Broad ELVIDGE_HYPOXIA_BY_DMOG_UP	View Gene Set	4.763e-08	125	5.697e-07	200	Genes up-regulated in MCF7 cells (breast cancer) treated with hypoxia mimetic DMOG [PubChem=3080614].	www.broad.mit.e...

Gene Set Collection: Broad.c2.CP.BIOCARTA

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: Broad.c2.CP.KEGG

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: Broad.c2.CP.REACTOME

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Broad BIOCARTA_MTA3_PATHWAY	View Gene Set	1.978e-05	19	0.004292	1	Downregulated of MTA-3 in ER-negative Breast Tumors	www.broad.mit.e...
Broad BIOCARTA_RANMS_PATHWAY	View Gene Set	0.0001415	10	0.01535	2	Role of Ran in mitotic spindle regulation	www.broad.mit.e...
Broad BIOCARTA_SKP2E2F_PATHWAY	View Gene Set	0.0002189	10	0.01583	3	E2F1 Destruction Pathway	www.broad.mit.e...
Broad BIOCARTA_P27_PATHWAY	View Gene Set	0.0003147	13	0.01707	4	Regulation of p27 Phosphorylation during Cell Cycle Progression	www.broad.mit.e...
Broad BIOCARTA_MCM_PATHWAY	View Gene Set	0.0009142	18	0.03968	5	CDK Regulation of DNA Replication	www.broad.mit.e...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Broad KEGG_SPLICEOSOME	View Gene Set	3.617e-09	118	3.364e-07	1	Spliceosome	www.broad.mit.e...
Broad KEGG_CELL_CYCLE	View Gene Set	2.17e-09	128	3.364e-07	1	Cell cycle	www.broad.mit.e...
Broad KEGG_PYRIMIDINE_METABOLISM	View Gene Set	1.553e-07	98	9.629e-06	3	Pyrimidine metabolism	www.broad.mit.e...
Broad KEGG_RNA_DEGRADATION	View Gene Set	0.000241	59	0.009031	4	RNA degradation	www.broad.mit.e...
Broad KEGG_UBIQUITIN_MEDIATED_PROTEOLYSIS	View Gene Set	0.0002428	138	0.009031	4	Ubiquitin mediated proteolysis	www.broad.mit.e...
Broad KEGG_GLUTATHIONE_METABOLISM	View Gene Set	0.0004613	50	0.0143	6	Glutathione metabolism	www.broad.mit.e...
Broad KEGG_ARGININE_AND_PROLINE_METABOLISM	View Gene Set	0.0007813	54	0.01993	7	Arginine and proline metabolism	www.broad.mit.e...
Broad KEGG_AMINO_SUGAR_AND_NUCLEOTIDE_SUGAR_METABOLISM	View Gene Set	0.001123	44	0.01993	7	Amino sugar and nucleotide sugar metabolism	www.broad.mit.e...
Broad KEGG_OOCYTE_MEIOSIS	View Gene Set	0.001029	114	0.01993	7	Oocyte meiosis	www.broad.mit.e...
Broad KEGG_LYSOSOME	View Gene Set	0.0008842	122	0.01993	7	Lysosome	www.broad.mit.e...
Broad KEGG_SMALL_CELL_LUNG_CANCER	View Gene Set	0.001179	84	0.01993	7	Small cell lung cancer	www.broad.mit.e...
Broad KEGG_AMINOACYL_TRNA_BIOSYNTHESIS	View Gene Set	0.002106	41	0.02933	12	Aminoacyl-tRNA biosynthesis	www.broad.mit.e...
Broad KEGG_RNA_POLYMERASE	View Gene Set	0.002208	29	0.02933	12	RNA polymerase	www.broad.mit.e...
Broad KEGG_MISMATCH_REPAIR	View Gene Set	0.001993	23	0.02933	12	Mismatch repair	www.broad.mit.e...
Broad KEGG_PROTEASOME	View Gene Set	0.002942	48	0.0304	15	Proteasome	www.broad.mit.e...
Broad KEGG_PROTEIN_EXPORT	View Gene Set	0.002776	24	0.0304	15	Protein export	www.broad.mit.e...
Broad KEGG_BASE_EXCISION_REPAIR	View Gene Set	0.002626	35	0.0304	15	Base excision repair	www.broad.mit.e...
Broad KEGG_TYPE_I_DIABETES_MELLITUS	View Gene Set	0.00288	44	0.0304	15	Type I diabetes mellitus	www.broad.mit.e...
Broad KEGG_DNA_REPLICATION	View Gene Set	0.003411	36	0.03339	19	DNA replication	www.broad.mit.e...
Broad KEGG_P53_SIGNALING_PATHWAY	View Gene Set	0.004236	69	0.0394	20	p53 signaling pathway	www.broad.mit.e...
Broad KEGG_HOMOLOGOUS_RECOMBINATION	View Gene Set	0.004933	28	0.04369	21	Homologous recombination	www.broad.mit.e...
Broad KEGG_NUCLEOTIDE_EXCISION_REPAIR	View Gene Set	0.005354	44	0.04526	22	Nucleotide excision repair	www.broad.mit.e...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Broad REACTOME_CELL_CYCLE_MITOTIC	View Gene Set	2.87e-27	306	1.234e-24	1	Genes involved in Cell Cycle Mitotic	www.broad.mit.e...
Broad REACTOME_MITOTIC_M_M_G1_PHASES	View Gene Set	9.536e-17	157	2.05e-14	2	Genes involved in Mitotic M-M/G1 phases	www.broad.mit.e...
Broad REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA	View Gene Set	1.183e-11	128	1.696e-09	3	Genes involved in Processing of Capped Intron-Containing Pre-mRNA	www.broad.mit.e...
Broad REACTOME_S_PHASE	View Gene Set	1.266e-10	103	1.361e-08	4	Genes involved in S Phase	www.broad.mit.e...
Broad REACTOME_CELL_CYCLE_CHECKPOINTS	View Gene Set	1.836e-10	110	1.579e-08	5	Genes involved in Cell Cycle Checkpoints	www.broad.mit.e...
Broad REACTOME_MITOTIC_PROMETAPHASE	View Gene Set	3.506e-10	92	2.512e-08	6	Genes involved in Mitotic Prometaphase	www.broad.mit.e...
Broad REACTOME_SYNTHESIS_OF_DNA	View Gene Set	4.527e-10	89	2.781e-08	7	Genes involved in Synthesis of DNA	www.broad.mit.e...
Broad REACTOME_G1_S_TRANSITION	View Gene Set	6.961e-10	102	3.742e-08	8	Genes involved in G1/S Transition	www.broad.mit.e...
Broad REACTOME_MRNA_SPLICING	View Gene Set	4.426e-09	97	2.115e-07	9	Genes involved in mRNA Splicing	www.broad.mit.e...
Broad REACTOME_ORC1_REMOVAL_FROM_CHROMATIN	View Gene Set	9.803e-09	63	4.215e-07	10	Genes involved in Orc1 removal from chromatin	www.broad.mit.e...
Broad REACTOME_GENE_EXPRESSION	View Gene Set	1.436e-08	415	5.613e-07	11	Genes involved in Gene Expression	www.broad.mit.e...
Broad REACTOME_REGULATION_OF_APC_ACTIVATORS_BETWEEN_G1_S_AND_EARLY_ANAPHASE	View Gene Set	1.572e-08	71	5.634e-07	12	Genes involved in Regulation of APC/C activators between G1/S and early anaphase	www.broad.mit.e...
Broad REACTOME_ELONGATION_AND_PROCESSING_OF_CAPPED_TRANSCRIPTS	View Gene Set	5.187e-08	124	1.716e-06	13	Genes involved in Elongation and Processing of Capped Transcripts	www.broad.mit.e...
Broad REACTOME_METABOLISM_OF_RNA	View Gene Set	7.109e-08	95	2.183e-06	14	Genes involved in Metabolism of RNA	www.broad.mit.e...
Broad REACTOME_DNA_REPLICATION_PRE_INITIATION	View Gene Set	1.497e-07	76	4.293e-06	15	Genes involved in DNA Replication Pre-Initiation	www.broad.mit.e...
Broad REACTOME_FORMATION_AND_MATURATION_OF_MRNA_TRANSCRIPT	View Gene Set	1.772e-07	142	4.734e-06	16	Genes involved in Formation and Maturation of mRNA Transcript	www.broad.mit.e...
Broad REACTOME_G2_M_TRANSITION	View Gene Set	1.872e-07	84	4.734e-06	16	Genes involved in G2/M Transition	www.broad.mit.e...
Broad REACTOME_CDC20_PHOSPHO_APC_MEDIATED_DEGRADATION_OF_CYCLIN_A	View Gene Set	2.667e-07	63	6.036e-06	18	Genes involved in Cdc20:Phospho-APC/C mediated degradation of Cyclin A	www.broad.mit.e...
Broad REACTOME_M_G1_TRANSITION	View Gene Set	2.596e-07	61	6.036e-06	18	Genes involved in M/G1 Transition	www.broad.mit.e...
Broad REACTOME_HIV_INFECTION	View Gene Set	4.429e-07	183	9.522e-06	20	Genes involved in HIV Infection	www.broad.mit.e...
Broad REACTOME_SCF_SKP2_MEDIATED_DEGRADATION_OF_P27_P21	View Gene Set	1.072e-06	52	2.196e-05	21	Genes involved in SCF(Skp2)-mediated degradation of p2721	www.broad.mit.e...
Broad REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS	View Gene Set	1.126e-06	120	2.2e-05	22	Genes involved in Host Interactions of HIV factors	www.broad.mit.e...
Broad REACTOME_CENTROSOME_MATURATION	View Gene Set	1.381e-06	72	2.581e-05	23	Genes involved in Centrosome maturation	www.broad.mit.e...
Broad REACTOME_METABLISM_OF_NUCLEOTIDES	View Gene Set	3.312e-06	71	5.935e-05	24	Genes involved in Metablism of nucleotides	www.broad.mit.e...
Broad REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS	View Gene Set	4.222e-06	37	7.262e-05	25	Genes involved in Activation of ATR in response to replication stress	www.broad.mit.e...
Broad REACTOME_LOSS_OF_NLP_FROM_MITOTIC_CENTROSOMES	View Gene Set	4.661e-06	62	7.708e-05	26	Genes involved in Loss of Nlp from mitotic centrosomes	www.broad.mit.e...
Broad REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX	View Gene Set	5.343e-06	52	8.509e-05	27	Genes involved in CDT1 association with the CDC6:ORC:origin complex	www.broad.mit.e...
Broad REACTOME_G2_M_CHECKPOINTS	View Gene Set	7.042e-06	43	0.0001081	28	Genes involved in G2/M Checkpoints	www.broad.mit.e...
Broad REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC	View Gene Set	1.295e-05	57	0.0001921	29	Genes involved in Autodegradation of Cdh1 by Cdh1:APC/C	www.broad.mit.e...
Broad REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_	View Gene Set	1.416e-05	58	0.0002029	30	Genes involved in Cyclin E associated events during G1/S transition	www.broad.mit.e...
Broad REACTOME_FORMATION_OF_TUBULIN_FOLDING_INTERMEDIATES_BY_CCT_TRIC	View Gene Set	2.008e-05	22	0.0002785	31	Genes involved in Formation of tubulin folding intermediates by CCT/TriC	www.broad.mit.e...
Broad REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE	View Gene Set	2.088e-05	47	0.0002806	32	Genes involved in Regulation of ornithine decarboxylase (ODC)	www.broad.mit.e...
Broad REACTOME_PYRIMIDINE_METABOLISM	View Gene Set	2.326e-05	22	0.0003031	33	Genes involved in Pyrimidine metabolism	www.broad.mit.e...
Broad REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1	View Gene Set	2.806e-05	48	0.0003549	34	Genes involved in SCF-beta-TrCP mediated degradation of Emi1	www.broad.mit.e...
Broad REACTOME_APOPTOSIS	View Gene Set	3.039e-05	129	0.0003733	35	Genes involved in Apoptosis	www.broad.mit.e...
Broad REACTOME_MRNA_SPLICING_MINOR_PATHWAY	View Gene Set	4.442e-05	38	0.0005305	36	Genes involved in mRNA Splicing - Minor Pathway	www.broad.mit.e...
Broad REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC	View Gene Set	5.159e-05	28	0.0005837	37	Genes involved in Prefoldin mediated transfer of substrate to CCT/TriC	www.broad.mit.e...
Broad REACTOME_SNRNP_ASSEMBLY	View Gene Set	5.14e-05	50	0.0005837	37	Genes involved in snRNP Assembly	www.broad.mit.e...
Broad REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION	View Gene Set	6.835e-05	33	0.0007536	39	Genes involved in E2F mediated regulation of DNA replication	www.broad.mit.e...
Broad REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRON_CONTAINING_TRANSCRIPT	View Gene Set	7.103e-05	42	0.0007635	40	Genes involved in Transport of Mature mRNA derived from an Intron-Containing Transcript	www.broad.mit.e...
Broad REACTOME_VPR_MEDIATED_NUCLEAR_IMPORT_OF_PICS	View Gene Set	0.0001067	31	0.001119	41	Genes involved in Vpr-mediated nuclear import of PICs	www.broad.mit.e...
Broad REACTOME_NUCLEAR_IMPORT_OF_REV_PROTEIN	View Gene Set	0.0001335	30	0.001367	42	Genes involved in Nuclear import of Rev protein	www.broad.mit.e...
Broad REACTOME_METABOLISM_OF_MRNA	View Gene Set	0.0001983	45	0.001983	43	Genes involved in Metabolism of mRNA	www.broad.mit.e...
Broad REACTOME_REV_MEDIATED_NUCLEAR_EXPORT_OF_HIV1_RNA	View Gene Set	0.0002163	31	0.002114	44	Genes involved in Rev-mediated nuclear export of HIV-1 RNA	www.broad.mit.e...
Broad REACTOME_ACTIVATION_OF_THE_PRE_REPLICATIVE_COMPLEX	View Gene Set	0.0002292	30	0.00219	45	Genes involved in Activation of the pre-replicative complex	www.broad.mit.e...
Broad REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS	View Gene Set	0.0002807	29	0.002624	46	Genes involved in Transport of Ribonucleoproteins into the Host Nucleus	www.broad.mit.e...
Broad REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY	View Gene Set	0.0004145	29	0.003792	47	Genes involved in NEP/NS2 Interacts with the Cellular Export Machinery	www.broad.mit.e...
Broad REACTOME_TRANSPORT_OF_THE_SLBP_INDEPENDENT_MATURE_MRNA	View Gene Set	0.0004475	32	0.004009	48	Genes involved in Transport of the SLBP independent Mature mRNA	www.broad.mit.e...
Broad REACTOME_SIGNALING_BY_WNT	View Gene Set	0.0004698	58	0.004122	49	Genes involved in Signaling by Wnt	www.broad.mit.e...
Broad REACTOME_TRANSCRIPTION	View Gene Set	0.0004928	188	0.004238	50	Genes involved in Transcription	www.broad.mit.e...
Broad REACTOME_INACTIVATION_OF_APC_VIA_DIRECT_INHIBITION_OF_THE_APCOMPLEX	View Gene Set	0.0005738	18	0.004838	51	Genes involved in Inactivation of APC/C via direct inhibition of the APC/C complex	www.broad.mit.e...
Broad REACTOME_HIV_LIFE_CYCLE	View Gene Set	0.0005916	103	0.004892	52	Genes involved in HIV Life Cycle	www.broad.mit.e...
Broad REACTOME_P53_INDEPENDENT_DNA_DAMAGE_RESPONSE	View Gene Set	0.0006599	43	0.005254	53	Genes involved in p53-Independent DNA Damage Response	www.broad.mit.e...
Broad REACTOME_STABILIZATION_OF_P53	View Gene Set	0.0006504	46	0.005254	53	Genes involved in Stabilization of p53	www.broad.mit.e...
Broad REACTOME_E2F_TRANSCRIPTIONAL_TARGETS_AT_G1_S	View Gene Set	0.0007573	22	0.005921	55	Genes involved in E2F transcriptional targets at G1/S	www.broad.mit.e...
Broad REACTOME_CDC6_ASSOCIATION_WITH_THE_ORC:ORIGIN_COMPLEX	View Gene Set	0.0007799	11	0.005988	56	Genes involved in CDC6 association with the ORC:origin complex	www.broad.mit.e...
Broad REACTOME_SYNTHESIS_AND_INTERCONVERSION_OF_NUCLEOTIDE_DI_AND_TRIPHOSPHATES	View Gene Set	0.001052	18	0.007938	57	Genes involved in Synthesis and interconversion of nucleotide di- and triphosphates	www.broad.mit.e...
Broad REACTOME_TELOMERE_MAINTENANCE	View Gene Set	0.001073	77	0.007958	58	Genes involved in Telomere Maintenance	www.broad.mit.e...
Broad REACTOME_DEADENYLATION_OF_MRNA	View Gene Set	0.001119	21	0.008154	59	Genes involved in Deadenylation of mRNA	www.broad.mit.e...
Broad REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G	View Gene Set	0.001202	47	0.008617	60	Genes involved in Vif-mediated degradation of APOBEC3G	www.broad.mit.e...
Broad REACTOME_DNA_STRAND_ELONGATION	View Gene Set	0.001254	31	0.008837	61	Genes involved in DNA strand elongation	www.broad.mit.e...
Broad REACTOME_ASSOCIATION_OF_LICENSING_FACTORS_WITH_THE_PREREPLICATIVE_COMPLEX	View Gene Set	0.001329	12	0.009217	62	Genes involved in Association of licensing factors with the pre-replicative complex	www.broad.mit.e...
Broad REACTOME_TRNA_AMINOACYLATION	View Gene Set	0.00168	40	0.01147	63	Genes involved in tRNA Aminoacylation	www.broad.mit.e...
Broad REACTOME_METABOLISM_OF_AMINO_ACIDS	View Gene Set	0.001824	162	0.01226	64	Genes involved in Metabolism of amino acids	www.broad.mit.e...
Broad REACTOME_EXTENSION_OF_TELOMERES	View Gene Set	0.002015	28	0.01333	65	Genes involved in Extension of Telomeres	www.broad.mit.e...
Broad REACTOME_DNA_REPAIR	View Gene Set	0.002203	102	0.01435	66	Genes involved in DNA Repair	www.broad.mit.e...
Broad REACTOME_RNA_POLYMERASE_I_III_AND_MITOCHONDRIAL_TRANSCRIPTION	View Gene Set	0.002422	120	0.01554	67	Genes involved in RNA Polymerase I RNA Polymerase III and Mitochondrial Transcription	www.broad.mit.e...
Broad REACTOME_ACTIVATION_OF_CHAPERONES_BY_IRE1_ALPHA	View Gene Set	0.00259	10	0.01638	68	Genes involved in Activation of Chaperones by IRE1alpha	www.broad.mit.e...
Broad REACTOME_APCDC20_MEDIATED_DEGRADATION_OF_CYCLIN_B	View Gene Set	0.002787	18	0.01737	69	Genes involved in APC/C:Cdc20 mediated degradation of Cyclin B	www.broad.mit.e...
Broad REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE	View Gene Set	0.003381	90	0.02077	70	Genes involved in Late Phase of HIV Life Cycle	www.broad.mit.e...
Broad REACTOME_CONVERSION_FROM_APC_CDC20_TO_APC_CDH1_IN_LATE_ANAPHASE	View Gene Set	0.004062	17	0.02426	71	Genes involved in Conversion from APC/C:Cdc20 to APC/C:Cdh1 in late anaphase	www.broad.mit.e...
Broad REACTOME_REPAIR_SYNTHESIS_OF_PATCH_27_30_BASES_LONG_BY_DNA_POLYMERASE	View Gene Set	0.004049	15	0.02426	71	Genes involved in Repair synthesis of patch ~27-30 bases long by DNA polymerase	www.broad.mit.e...
Broad REACTOME_G1_PHASE	View Gene Set	0.00507	16	0.02986	73	Genes involved in G1 Phase	www.broad.mit.e...
Broad REACTOME_DOUBLE_STRAND_BREAK_REPAIR	View Gene Set	0.005328	21	0.03079	74	Genes involved in Double-Strand Break Repair	www.broad.mit.e...
Broad REACTOME_GLUTATHIONE_CONJUGATION	View Gene Set	0.005371	17	0.03079	74	Genes involved in Glutathione conjugation	www.broad.mit.e...
Broad REACTOME_UNFOLDED_PROTEIN_RESPONSE	View Gene Set	0.005487	19	0.03105	76	Genes involved in Unfolded Protein Response	www.broad.mit.e...
Broad REACTOME_REGULATION_OF_GLUCOKINASE_BY_GLUCOKINASE_REGULATORY_PROTEIN	View Gene Set	0.00583	29	0.03256	77	Genes involved in Regulation of Glucokinase by Glucokinase Regulatory Protein	www.broad.mit.e...
Broad REACTOME_FANCONI_ANEMIA_PATHWAY	View Gene Set	0.006662	15	0.03673	78	Genes involved in Fanconi Anemia pathway	www.broad.mit.e...
Broad REACTOME_PHOSPHORYLATION_OF_THE_APC	View Gene Set	0.007439	17	0.04049	79	Genes involved in Phosphorylation of the APC/C	www.broad.mit.e...
Broad REACTOME_RNA_POLYMERASE_I_PROMOTER_CLEARANCE	View Gene Set	0.008176	82	0.0439	80	Genes involved in RNA PolymerasePromoter Clearance	www.broad.mit.e...
Broad REACTOME_UNWINDING_OF_DNA	View Gene Set	0.00827	11	0.0439	80	Genes involved in Unwinding of DNA	www.broad.mit.e...

Gene Set Collection: Broad.c3.MIR

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: Broad.c3.TFT

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Broad GTGCCTT MIR-506	View Gene Set	2.717e-06	605	0.0006004	1	Targets of MicroRNA GTGCCTT MIR-506	www.broad.mit.e... MIR-506...
Broad TGCCTTA MIR-124A	View Gene Set	1.838e-05	471	0.002031	2	Targets of MicroRNA TGCCTTA MIR-124A	www.broad.mit.e... MIR-124A...
Broad CACTGCC MIR-34A MIR-34C MIR-449	View Gene Set	0.0001083	249	0.00798	3	Targets of MicroRNA CACTGCC MIR-34A MIR-34C MIR-449	www.broad.mit.e... MIR-34A... MIR-34C... MIR-449...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Broad RCGCANGCGY_V$NRF1_Q6	View Gene Set	1.222e-13	580	7.514e-11	1	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif RCGCANGCGY which matches annotation for NRF1: nuclear respiratory factor 1	www.broad.mit.e...
Broad SCGGAAGY_V$ELK1_02	View Gene Set	3.033e-13	784	9.325e-11	2	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif SCGGAAGY which matches annotation for ELK1: ELK1 member of ETS oncogene family	www.broad.mit.e...
Broad GGGCGGR_V$SP1_Q6	View Gene Set	2.984e-12	2120	6.116e-10	3	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GGGCGGR which matches annotation for SP1: Sp1 transcription factor	www.broad.mit.e...
Broad V$USF_01	View Gene Set	9.402e-08	186	1.446e-05	4	Genes with promoter regions [-2kb 2kb] around transcription start site containing motif NNRYCACGTGRYNN. Motif does not match any known transcription factor	www.broad.mit.e...
Broad CACGTG_V$MYC_Q2	View Gene Set	1.944e-07	734	2.129e-05	5	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif CACGTG which matches annotation for MYC: v-myc myelocytomatosis viral oncogene homolog (avian)	www.broad.mit.e...
Broad GCCATNTTG_V$YY1_Q6	View Gene Set	2.077e-07	289	2.129e-05	5	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GCCATNTTG which matches annotation for YY1: YY1 transcription factor	www.broad.mit.e...
Broad V$SREBP1_01	View Gene Set	6.533e-06	133	0.000574	7	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NATCACGTGAY which matches annotation for SREBF1: sterol regulatory element binding transcription factor 1	www.broad.mit.e...
Broad V$ELK1_02	View Gene Set	1.823e-05	170	0.001121	8	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNNNCCGGAARTNN which matches annotation for ELK1: ELK1 member of ETS oncogene family	www.broad.mit.e...
Broad ACTAYRNNNCCCR_UNKNOWN	View Gene Set	1.616e-05	293	0.001121	8	Genes with promoter regions [-2kb 2kb] around transcription start site containing motif ACTAYRNNNCCCR. Motif does not match any known transcription factor	www.broad.mit.e...
Broad GATTGGY_V$NFY_Q6_01	View Gene Set	1.768e-05	830	0.001121	8	Genes with promoter regions [-2kb 2kb] around transcription start site containing motif GATTGGY. Motif does not match any known transcription factor	www.broad.mit.e...
Broad V$GABP_B	View Gene Set	6.452e-05	162	0.003607	11	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif VCCGGAAGNGCR which matches annotation for GABPA: GA binding protein transcription factor alpha subunit 60kDa<br> GABPB2: GA binding protein transcription factor beta subunit 2	www.broad.mit.e...
Broad MGGAAGTG_V$GABP_B	View Gene Set	7.987e-05	512	0.004093	12	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif MGGAAGTG which matches annotation for GABPA: GA binding protein transcription factor alpha subunit 60kDa<br> GABPB2: GA binding protein transcription factor beta subunit 2	www.broad.mit.e...
Broad V$E2F1_Q6	View Gene Set	0.0001113	167	0.005267	13	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TTTSGCGS which matches annotation for E2F1: E2F transcription factor 1	www.broad.mit.e...
Broad V$MAX_01	View Gene Set	0.0001442	194	0.006334	14	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNANCACGTGNTNN which matches annotation for MAX: MYC associated factor X	www.broad.mit.e...
Broad V$USF_02	View Gene Set	0.0001594	197	0.006536	15	Genes with promoter regions [-2kb 2kb] around transcription start site containing motif NNRNCACGTGNYNN. Motif does not match any known transcription factor	www.broad.mit.e...
Broad TMTCGCGANR_UNKNOWN	View Gene Set	0.0002337	100	0.008984	16	Genes with promoter regions [-2kb 2kb] around transcription start site containing motif TMTCGCGANR. Motif does not match any known transcription factor	www.broad.mit.e...
Broad SGCGSSAAA_V$E2F1DP2_01	View Gene Set	0.0002504	122	0.009058	17	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif SGCGSSAAA which matches annotation for E2F1: E2F transcription factor 1<br> TFDP1: transcription factor Dp-1<br> RB1: retinoblastoma 1 (including osteosarcoma)	www.broad.mit.e...
Broad GKCGCNNNNNNNTGAYG_UNKNOWN	View Gene Set	0.0002941	41	0.01005	18	Genes with promoter regions [-2kb 2kb] around transcription start site containing motif GKCGCNNNNNNNTGAYG. Motif does not match any known transcription factor	www.broad.mit.e...
Broad V$E2F_02	View Gene Set	0.0004641	169	0.01264	19	Genes with promoter regions [-2kb 2kb] around transcription start site containing motif TTTSGCGC. Motif does not match any known transcription factor	www.broad.mit.e...
Broad V$NRF2_01	View Gene Set	0.0004648	166	0.01264	19	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif ACCGGAAGNG which matches annotation for GABPB1: GA binding protein transcription factor beta subunit 1.	www.broad.mit.e...
Broad V$E2F1DP1_01	View Gene Set	0.0004726	169	0.01264	19	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TTTCSCGC which matches annotation for E2F1: E2F transcription factor 1<br> TFDP1: transcription factor Dp-1	www.broad.mit.e...
Broad V$E2F1DP2_01	View Gene Set	0.0004726	169	0.01264	19	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TTTSSCGC which matches annotation for E2F1: E2F transcription factor 1<br> TFDP2: transcription factor Dp-2 (E2F dimerization partner 2)	www.broad.mit.e...
Broad V$E2F4DP2_01	View Gene Set	0.0004726	169	0.01264	19	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TTTCSCGC which matches annotation for E2F4: E2F transcription factor 4 p107/p130-binding<br> TFDP2: transcription factor Dp-2 (E2F dimerization partner 2)	www.broad.mit.e...
Broad V$E2F4DP1_01	View Gene Set	0.0005284	174	0.01354	24	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TTTSGCGC which matches annotation for E2F4: E2F transcription factor 4 p107/p130-binding<br> TFDP1: transcription factor Dp-1	www.broad.mit.e...
Broad V$USF_C	View Gene Set	0.0006871	211	0.0169	25	Genes with promoter regions [-2kb 2kb] around transcription start site containing motif NCACGTGN. Motif does not match any known transcription factor	www.broad.mit.e...
Broad V$ATF4_Q2	View Gene Set	0.001017	188	0.02315	26	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif CVTGACGYMABG which matches annotation for ATF4: activating transcription factor 4 (tax-responsive enhancer element B67)	www.broad.mit.e...
Broad GCGNNANTTCC_UNKNOWN	View Gene Set	0.0009812	85	0.02315	26	Genes with promoter regions [-2kb 2kb] around transcription start site containing motif GCGNNANTTCC. Motif does not match any known transcription factor	www.broad.mit.e...
Broad V$E2F_03	View Gene Set	0.00119	171	0.02613	28	Genes with promoter regions [-2kb 2kb] around transcription start site containing motif TTTSGCGCGMNR. Motif does not match any known transcription factor	www.broad.mit.e...
Broad V$E2F_Q6_01	View Gene Set	0.001389	167	0.02945	29	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NKCGCGCSAAAN which matches annotation for E2F<br> TFDP1: transcription factor Dp-1	www.broad.mit.e...
Broad V$E2F1_Q3	View Gene Set	0.001603	176	0.03286	30	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NKTSSCGC which matches annotation for E2F1: E2F transcription factor 1	www.broad.mit.e...
Broad V$NFMUE1_Q6	View Gene Set	0.001923	175	0.03696	31	Genes with promoter regions [-2kb 2kb] around transcription start site containing motif CGGCCATCT. Motif does not match any known transcription factor	www.broad.mit.e...
Broad TTCNRGNNNNTTC_V$HSF_Q6	View Gene Set	0.001876	111	0.03696	31	Genes with promoter regions [-2kb 2kb] around transcription start site containing motif TTCNRGNNNNTTC. Motif does not match any known transcription factor	www.broad.mit.e...
Broad V$E2F1_Q6_01	View Gene Set	0.002011	177	0.03749	33	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NTTTCGCGCS which matches annotation for E2F1: E2F transcription factor 1	www.broad.mit.e...
Broad V$CREB_02	View Gene Set	0.002189	185	0.03793	34	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif NNGNTGACGTNN which matches annotation for CREB1: cAMP responsive element binding protein 1	www.broad.mit.e...
Broad V$E2F_Q6	View Gene Set	0.002207	165	0.03793	34	Genes with promoter regions [-2kb 2kb] around transcription start site containing motif TTTSGCGS. Motif does not match any known transcription factor	www.broad.mit.e...
Broad GGAMTNNNNNTCCY_UNKNOWN	View Gene Set	0.002282	85	0.03793	34	Genes with promoter regions [-2kb 2kb] around transcription start site containing motif GGAMTNNNNNTCCY. Motif does not match any known transcription factor	www.broad.mit.e...
Broad GTGACGY_V$E4F1_Q6	View Gene Set	0.002255	462	0.03793	34	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GTGACGY which matches annotation for E4F1: E4F transcription factor 1	www.broad.mit.e...
Broad V$YY1_Q6	View Gene Set	0.002622	166	0.04243	38	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif GCCATNTTN which matches annotation for YY1: YY1 transcription factor	www.broad.mit.e...
Broad RRCCGTTA_UNKNOWN	View Gene Set	0.002856	53	0.04503	39	Genes with promoter regions [-2kb 2kb] around transcription start site containing motif RRCCGTTA. Motif does not match any known transcription factor	www.broad.mit.e...
Broad V$NRF1_Q6	View Gene Set	0.003225	151	0.04837	40	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif CGCATGCGCR which matches annotation for NRF1: nuclear respiratory factor 1	www.broad.mit.e...
Broad V$E2F_Q3_01	View Gene Set	0.003215	171	0.04837	40	Genes with promoter regions [-2kb 2kb] around transcription start site containing the motif TTTSGCGSG which matches annotation for E2F<br> TFDP1: transcription factor Dp-1	www.broad.mit.e...

Gene Set Collection: Broad.c4.CGN

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Broad MORF_BUB3	View Gene Set	6.601e-17	256	1.409e-14	1	Neighborhood of BUB3	www.broad.mit.e...
Broad MORF_RAD23A	View Gene Set	5.764e-17	316	1.409e-14	1	Neighborhood of RAD23A	www.broad.mit.e...
Broad MORF_ANP32B	View Gene Set	4.689e-15	174	6.674e-13	3	Neighborhood of ANP32B	www.broad.mit.e...
Broad GNF2_CCNB2	View Gene Set	1.046e-14	53	1.117e-12	4	Neighborhood of CCNB2	www.broad.mit.e...
Broad GNF2_CDC20	View Gene Set	1.351e-14	52	1.154e-12	5	Neighborhood of CDC20	www.broad.mit.e...
Broad MORF_EIF3S2	View Gene Set	2.242e-14	220	1.595e-12	6	Neighborhood of EIF3S2	www.broad.mit.e...
Broad GNF2_RRM1	View Gene Set	3.552e-14	82	2.166e-12	7	Neighborhood of RRM1	www.broad.mit.e...
Broad MORF_HDAC2	View Gene Set	4.465e-14	256	2.383e-12	8	Neighborhood of HDAC2	www.broad.mit.e...
Broad GNF2_SMC4L1	View Gene Set	8.809e-14	75	4.179e-12	9	Neighborhood of SMC4L1	www.broad.mit.e...
Broad GNF2_PCNA	View Gene Set	9.894e-14	62	4.225e-12	10	Neighborhood of PCNA	www.broad.mit.e...
Broad MORF_ACP1	View Gene Set	1.151e-13	178	4.468e-12	11	Neighborhood of ACP1	www.broad.mit.e...
Broad GNF2_CENPF	View Gene Set	1.964e-13	56	6.989e-12	12	Neighborhood of CENPF	www.broad.mit.e...
Broad MORF_FBL	View Gene Set	2.303e-13	121	7.565e-12	13	Neighborhood of FBL	www.broad.mit.e...
Broad GNF2_CDC2	View Gene Set	2.85e-13	56	8.692e-12	14	Neighborhood of CDC2	www.broad.mit.e...
Broad MORF_DEK	View Gene Set	3.192e-13	229	8.702e-12	15	Neighborhood of DEK	www.broad.mit.e...
Broad GNF2_CCNA2	View Gene Set	3.261e-13	62	8.702e-12	15	Neighborhood of CCNA2	www.broad.mit.e...
Broad GNF2_RAN	View Gene Set	4.15e-13	78	1.042e-11	17	Neighborhood of RAN	www.broad.mit.e...
Broad MORF_CSNK2B	View Gene Set	9.832e-13	256	2.332e-11	18	Neighborhood of CSNK2B	www.broad.mit.e...
Broad GNF2_RFC4	View Gene Set	1.949e-12	57	4.381e-11	19	Neighborhood of RFC4	www.broad.mit.e...
Broad MORF_SOD1	View Gene Set	5.82e-12	247	1.243e-10	20	Neighborhood of SOD1	www.broad.mit.e...
Broad GNF2_PA2G4	View Gene Set	1.608e-11	73	3.27e-10	21	Neighborhood of PA2G4	www.broad.mit.e...
Broad MORF_G22P1	View Gene Set	1.798e-11	145	3.49e-10	22	Neighborhood of G22P1	www.broad.mit.e...
Broad GNF2_HMMR	View Gene Set	2.133e-11	43	3.959e-10	23	Neighborhood of HMMR	www.broad.mit.e...
Broad GNF2_MCM4	View Gene Set	2.513e-11	50	4.471e-10	24	Neighborhood of MCM4	www.broad.mit.e...
Broad GNF2_ESPL1	View Gene Set	3.874e-11	35	6.617e-10	25	Neighborhood of ESPL1	www.broad.mit.e...
Broad MORF_RAN	View Gene Set	5.31e-11	242	8.721e-10	26	Neighborhood of RAN	www.broad.mit.e...
Broad MORF_RFC4	View Gene Set	5.705e-11	137	9.023e-10	27	Neighborhood of RFC4	www.broad.mit.e...
Broad GNF2_BUB1B	View Gene Set	6.329e-11	46	9.652e-10	28	Neighborhood of BUB1B	www.broad.mit.e...
Broad GNF2_CKS1B	View Gene Set	1.255e-10	36	1.848e-09	29	Neighborhood of CKS1B	www.broad.mit.e...
Broad MORF_HDAC1	View Gene Set	2.817e-10	222	4.01e-09	30	Neighborhood of HDAC1	www.broad.mit.e...
Broad MORF_PRKDC	View Gene Set	3.017e-10	173	4.156e-09	31	Neighborhood of PRKDC	www.broad.mit.e...
Broad MORF_AATF	View Gene Set	4.342e-10	179	5.794e-09	32	Neighborhood of AATF	www.broad.mit.e...
Broad MORF_RAD54L	View Gene Set	6.477e-10	94	8.164e-09	33	Neighborhood of RAD54L	www.broad.mit.e...
Broad MORF_UBE2I	View Gene Set	6.501e-10	208	8.164e-09	33	Neighborhood of UBE2I	www.broad.mit.e...
Broad MORF_EIF3S6	View Gene Set	7.581e-10	108	8.991e-09	35	Neighborhood of EIF3S6	www.broad.mit.e...
Broad MORF_GNB1	View Gene Set	7.478e-10	276	8.991e-09	35	Neighborhood of GNB1	www.broad.mit.e...
Broad GNF2_RRM2	View Gene Set	8.481e-10	36	9.787e-09	37	Neighborhood of RRM2	www.broad.mit.e...
Broad GNF2_FEN1	View Gene Set	1.487e-09	49	1.671e-08	38	Neighborhood of FEN1	www.broad.mit.e...
Broad GNF2_CENPE	View Gene Set	2.048e-09	37	2.243e-08	39	Neighborhood of CENPE	www.broad.mit.e...
Broad MORF_ESPL1	View Gene Set	2.176e-09	58	2.323e-08	40	Neighborhood of ESPL1	www.broad.mit.e...
Broad MORF_SKP1A	View Gene Set	2.32e-09	175	2.359e-08	41	Neighborhood of SKP1A	www.broad.mit.e...
Broad GNF2_APEX1	View Gene Set	2.278e-09	72	2.359e-08	41	Neighborhood of APEX1	www.broad.mit.e...
Broad GNF2_MCM5	View Gene Set	2.52e-09	51	2.451e-08	43	Neighborhood of MCM5	www.broad.mit.e...
Broad GNF2_TTK	View Gene Set	2.525e-09	34	2.451e-08	43	Neighborhood of TTK	www.broad.mit.e...
Broad MORF_DNMT1	View Gene Set	3.017e-09	105	2.862e-08	45	Neighborhood of DNMT1	www.broad.mit.e...
Broad MORF_PPP1CC	View Gene Set	7.524e-09	150	6.984e-08	46	Neighborhood of PPP1CC	www.broad.mit.e...
Broad MORF_HAT1	View Gene Set	8.422e-09	155	7.652e-08	47	Neighborhood of HAT1	www.broad.mit.e...
Broad GNF2_BUB1	View Gene Set	9.945e-09	25	8.847e-08	48	Neighborhood of BUB1	www.broad.mit.e...
Broad MORF_AP2M1	View Gene Set	1.503e-08	197	1.31e-07	49	Neighborhood of AP2M1	www.broad.mit.e...
Broad GNF2_RFC3	View Gene Set	1.885e-08	38	1.61e-07	50	Neighborhood of RFC3	www.broad.mit.e...
Broad GNF2_CKS2	View Gene Set	1.952e-08	45	1.635e-07	51	Neighborhood of CKS2	www.broad.mit.e...
Broad MORF_DAP3	View Gene Set	2.95e-08	175	2.422e-07	52	Neighborhood of DAP3	www.broad.mit.e...
Broad MORF_RRM1	View Gene Set	4.06e-08	90	3.216e-07	53	Neighborhood of RRM1	www.broad.mit.e...
Broad GNF2_NPM1	View Gene Set	4.068e-08	57	3.216e-07	53	Neighborhood of NPM1	www.broad.mit.e...
Broad MORF_XRCC5	View Gene Set	4.403e-08	210	3.419e-07	55	Neighborhood of XRCC5	www.broad.mit.e...
Broad GNF2_MLH1	View Gene Set	4.638e-08	36	3.536e-07	56	Neighborhood of MLH1	www.broad.mit.e...
Broad MORF_RAD21	View Gene Set	6.271e-08	157	4.698e-07	57	Neighborhood of RAD21	www.broad.mit.e...
Broad MORF_PSMC1	View Gene Set	9.247e-08	162	6.807e-07	58	Neighborhood of PSMC1	www.broad.mit.e...
Broad MORF_PRKAG1	View Gene Set	1.47e-07	202	1.064e-06	59	Neighborhood of PRKAG1	www.broad.mit.e...
Broad GNF2_H2AFX	View Gene Set	1.836e-07	28	1.307e-06	60	Neighborhood of H2AFX	www.broad.mit.e...
Broad GNF2_FBL	View Gene Set	1.878e-07	119	1.314e-06	61	Neighborhood of FBL	www.broad.mit.e...
Broad MORF_PPP1CA	View Gene Set	2.063e-07	145	1.421e-06	62	Neighborhood of PPP1CA	www.broad.mit.e...
Broad GNF2_MKI67	View Gene Set	2.543e-07	26	1.723e-06	63	Neighborhood of MKI67	www.broad.mit.e...
Broad MORF_PTPN11	View Gene Set	3.146e-07	93	2.099e-06	64	Neighborhood of PTPN11	www.broad.mit.e...
Broad MORF_BUB1B	View Gene Set	3.347e-07	61	2.199e-06	65	Neighborhood of BUB1B	www.broad.mit.e...
Broad MORF_RPA2	View Gene Set	4.068e-07	170	2.632e-06	66	Neighborhood of RPA2	www.broad.mit.e...
Broad GNF2_MSH6	View Gene Set	4.369e-07	30	2.785e-06	67	Neighborhood of MSH6	www.broad.mit.e...
Broad MORF_EI24	View Gene Set	6.655e-07	136	4.119e-06	68	Neighborhood of EI24	www.broad.mit.e...
Broad GNF2_RBBP6	View Gene Set	6.56e-07	54	4.119e-06	68	Neighborhood of RBBP6	www.broad.mit.e...
Broad MORF_FEN1	View Gene Set	8.013e-07	58	4.888e-06	70	Neighborhood of FEN1	www.broad.mit.e...
Broad MORF_CCNF	View Gene Set	9.028e-07	65	5.429e-06	71	Neighborhood of CCNF	www.broad.mit.e...
Broad MORF_PCNA	View Gene Set	1.04e-06	71	6.169e-06	72	Neighborhood of PCNA	www.broad.mit.e...
Broad GNF2_DEK	View Gene Set	1.127e-06	45	6.591e-06	73	Neighborhood of DEK	www.broad.mit.e...
Broad MORF_DDB1	View Gene Set	1.546e-06	220	8.922e-06	74	Neighborhood of DDB1	www.broad.mit.e...
Broad MORF_CCNI	View Gene Set	1.838e-06	76	1.046e-05	75	Neighborhood of CCNI	www.broad.mit.e...
Broad GNF2_KPNB1	View Gene Set	1.984e-06	52	1.115e-05	76	Neighborhood of KPNB1	www.broad.mit.e...
Broad MORF_BUB1	View Gene Set	2.077e-06	49	1.137e-05	77	Neighborhood of BUB1	www.broad.mit.e...
Broad GCM_APEX1	View Gene Set	2.077e-06	102	1.137e-05	77	Neighborhood of APEX1	www.broad.mit.e...
Broad MORF_RAC1	View Gene Set	2.27e-06	196	1.227e-05	79	Neighborhood of RAC1	www.broad.mit.e...
Broad MORF_UBE2N	View Gene Set	2.638e-06	79	1.408e-05	80	Neighborhood of UBE2N	www.broad.mit.e...
Broad MORF_RAB1A	View Gene Set	2.728e-06	179	1.438e-05	81	Neighborhood of RAB1A	www.broad.mit.e...
Broad GNF2_SMC2L1	View Gene Set	2.896e-06	30	1.508e-05	82	Neighborhood of SMC2L1	www.broad.mit.e...
Broad MORF_UNG	View Gene Set	3.98e-06	65	2.048e-05	83	Neighborhood of UNG	www.broad.mit.e...
Broad MORF_ERH	View Gene Set	5.594e-06	103	2.843e-05	84	Neighborhood of ERH	www.broad.mit.e...
Broad GNF2_NS	View Gene Set	5.701e-06	35	2.864e-05	85	Neighborhood of NS	www.broad.mit.e...
Broad GNF2_ELAC2	View Gene Set	6.157e-06	32	3.057e-05	86	Neighborhood of ELAC2	www.broad.mit.e...
Broad MORF_CDK2	View Gene Set	7.771e-06	63	3.814e-05	87	Neighborhood of CDK2	www.broad.mit.e...
Broad GNF2_ANP32B	View Gene Set	9.431e-06	29	4.576e-05	88	Neighborhood of ANP32B	www.broad.mit.e...
Broad MORF_RAD23B	View Gene Set	2.04e-05	159	9.786e-05	89	Neighborhood of RAD23B	www.broad.mit.e...
Broad MORF_RAF1	View Gene Set	3.48e-05	94	0.0001651	90	Neighborhood of RAF1	www.broad.mit.e...
Broad GCM_CSNK2B	View Gene Set	3.909e-05	88	0.0001834	91	Neighborhood of CSNK2B	www.broad.mit.e...
Broad MORF_NPM1	View Gene Set	4.021e-05	152	0.0001866	92	Neighborhood of NPM1	www.broad.mit.e...
Broad MORF_PHB	View Gene Set	4.099e-05	112	0.0001882	93	Neighborhood of PHB	www.broad.mit.e...
Broad GCM_ACTG1	View Gene Set	4.271e-05	113	0.0001919	94	Neighborhood of ACTG1	www.broad.mit.e...
Broad GCM_RAB10	View Gene Set	4.232e-05	143	0.0001919	94	Neighborhood of RAB10	www.broad.mit.e...
Broad GCM_ANP32B	View Gene Set	5.403e-05	32	0.0002403	96	Neighborhood of ANP32B	www.broad.mit.e...
Broad GNF2_MSH2	View Gene Set	5.965e-05	26	0.0002626	97	Neighborhood of MSH2	www.broad.mit.e...
Broad GNF2_DENR	View Gene Set	6.484e-05	39	0.0002825	98	Neighborhood of DENR	www.broad.mit.e...
Broad MORF_SMC1L1	View Gene Set	0.0001031	47	0.0004359	99	Neighborhood of SMC1L1	www.broad.mit.e...
Broad GCM_CRKL	View Gene Set	0.0001027	50	0.0004359	99	Neighborhood of CRKL	www.broad.mit.e...
Broad GNF2_HDAC1	View Gene Set	0.0001031	85	0.0004359	99	Neighborhood of HDAC1	www.broad.mit.e...
Broad MORF_SART1	View Gene Set	0.0001066	55	0.0004462	102	Neighborhood of SART1	www.broad.mit.e...
Broad MORF_PPP2CA	View Gene Set	0.0001158	110	0.0004802	103	Neighborhood of PPP2CA	www.broad.mit.e...
Broad GCM_MAP4K4	View Gene Set	0.000141	144	0.0005789	104	Neighborhood of MAP4K4	www.broad.mit.e...
Broad MORF_CDC16	View Gene Set	0.0001476	67	0.0006002	105	Neighborhood of CDC16	www.broad.mit.e...
Broad GNF2_HAT1	View Gene Set	0.0001523	45	0.0006134	106	Neighborhood of HAT1	www.broad.mit.e...
Broad MORF_NME2	View Gene Set	0.000175	145	0.0006983	107	Neighborhood of NME2	www.broad.mit.e...
Broad MORF_PPP2R4	View Gene Set	0.0002013	44	0.0007959	108	Neighborhood of PPP2R4	www.broad.mit.e...
Broad MORF_PSMC2	View Gene Set	0.0002078	100	0.0008141	109	Neighborhood of PSMC2	www.broad.mit.e...
Broad MORF_DAP	View Gene Set	0.0002099	72	0.0008149	110	Neighborhood of DAP	www.broad.mit.e...
Broad MORF_MSH2	View Gene Set	0.0002377	52	0.0009143	111	Neighborhood of MSH2	www.broad.mit.e...
Broad GNF2_CDH11	View Gene Set	0.0002546	25	0.0009707	112	Neighborhood of CDH11	www.broad.mit.e...
Broad GNF2_XRCC5	View Gene Set	0.0002579	61	0.0009746	113	Neighborhood of XRCC5	www.broad.mit.e...
Broad MORF_MAP2K2	View Gene Set	0.0002779	123	0.001032	114	Neighborhood of MAP2K2	www.broad.mit.e...
Broad MORF_SNRP70	View Gene Set	0.0002757	50	0.001032	114	Neighborhood of SNRP70	www.broad.mit.e...
Broad GNF2_SERPINB5	View Gene Set	0.0002815	25	0.001036	116	Neighborhood of SERPINB5	www.broad.mit.e...
Broad GNF2_PTX3	View Gene Set	0.0003371	36	0.00123	117	Neighborhood of PTX3	www.broad.mit.e...
Broad GNF2_TDG	View Gene Set	0.0003506	23	0.001269	118	Neighborhood of TDG	www.broad.mit.e...
Broad MORF_CDC10	View Gene Set	0.0003612	120	0.001285	119	Neighborhood of CDC10	www.broad.mit.e...
Broad MORF_GMPS	View Gene Set	0.0003612	48	0.001285	119	Neighborhood of GMPS	www.broad.mit.e...
Broad GCM_RAN	View Gene Set	0.0003964	160	0.001399	121	Neighborhood of RAN	www.broad.mit.e...
Broad GNF2_STAT6	View Gene Set	0.0004159	75	0.001455	122	Neighborhood of STAT6	www.broad.mit.e...
Broad MORF_PPP6C	View Gene Set	0.000449	88	0.001559	123	Neighborhood of PPP6C	www.broad.mit.e...
Broad MORF_BMI1	View Gene Set	0.0005041	71	0.001736	124	Neighborhood of BMI1	www.broad.mit.e...
Broad GNF2_LYN	View Gene Set	0.0005462	26	0.001866	125	Neighborhood of LYN	www.broad.mit.e...
Broad GCM_NF2	View Gene Set	0.0005932	235	0.00201	126	Neighborhood of NF2	www.broad.mit.e...
Broad GCM_HBP1	View Gene Set	0.0006295	54	0.002116	127	Neighborhood of HBP1	www.broad.mit.e...
Broad GCM_BMPR2	View Gene Set	0.0006352	68	0.002119	128	Neighborhood of BMPR2	www.broad.mit.e...
Broad MORF_CTBP1	View Gene Set	0.0006697	149	0.002217	129	Neighborhood of CTBP1	www.broad.mit.e...
Broad GCM_MAX	View Gene Set	0.0006785	28	0.002229	130	Neighborhood of MAX	www.broad.mit.e...
Broad MORF_EIF4A2	View Gene Set	0.0007073	120	0.002305	131	Neighborhood of EIF4A2	www.broad.mit.e...
Broad MORF_ACTG1	View Gene Set	0.0007388	134	0.00239	132	Neighborhood of ACTG1	www.broad.mit.e...
Broad GCM_RBM8A	View Gene Set	0.0008283	64	0.002659	133	Neighborhood of RBM8A	www.broad.mit.e...
Broad MORF_MTA1	View Gene Set	0.0009107	95	0.002902	134	Neighborhood of MTA1	www.broad.mit.e...
Broad MORF_PPP2R5E	View Gene Set	0.001029	76	0.003253	135	Neighborhood of PPP2R5E	www.broad.mit.e...
Broad MORF_PPP5C	View Gene Set	0.001066	81	0.003347	136	Neighborhood of PPP5C	www.broad.mit.e...
Broad GCM_ERBB2IP	View Gene Set	0.001209	57	0.003769	137	Neighborhood of ERBB2IP	www.broad.mit.e...
Broad MORF_SS18	View Gene Set	0.001287	55	0.003974	138	Neighborhood of SS18	www.broad.mit.e...
Broad GNF2_UBE2I	View Gene Set	0.001294	33	0.003974	138	Neighborhood of UBE2I	www.broad.mit.e...
Broad GNF2_INPP5D	View Gene Set	0.001318	38	0.00402	140	Neighborhood of INPP5D	www.broad.mit.e...
Broad GNF2_CASP4	View Gene Set	0.001363	23	0.004127	141	Neighborhood of CASP4	www.broad.mit.e...
Broad MORF_GSPT1	View Gene Set	0.001463	41	0.004399	142	Neighborhood of GSPT1	www.broad.mit.e...
Broad GNF2_ST13	View Gene Set	0.001581	56	0.00472	143	Neighborhood of ST13	www.broad.mit.e...
Broad MORF_DEAF1	View Gene Set	0.001606	54	0.00473	144	Neighborhood of DEAF1	www.broad.mit.e...
Broad GNF2_SMC1L1	View Gene Set	0.001606	24	0.00473	144	Neighborhood of SMC1L1	www.broad.mit.e...
Broad GNF2_G22P1	View Gene Set	0.001645	29	0.00481	146	Neighborhood of G22P1	www.broad.mit.e...
Broad GNF2_CDH3	View Gene Set	0.001691	24	0.004912	147	Neighborhood of CDH3	www.broad.mit.e...
Broad MORF_RFC1	View Gene Set	0.001928	98	0.005564	148	Neighborhood of RFC1	www.broad.mit.e...
Broad MORF_TERF1	View Gene Set	0.002023	57	0.005797	149	Neighborhood of TERF1	www.broad.mit.e...
Broad GCM_DDX5	View Gene Set	0.002135	52	0.006078	150	Neighborhood of DDX5	www.broad.mit.e...
Broad GCM_DFFA	View Gene Set	0.00219	100	0.006193	151	Neighborhood of DFFA	www.broad.mit.e...
Broad MORF_AP3D1	View Gene Set	0.002331	119	0.006548	152	Neighborhood of AP3D1	www.broad.mit.e...
Broad MORF_ATOX1	View Gene Set	0.002507	72	0.006997	153	Neighborhood of ATOX1	www.broad.mit.e...
Broad MORF_BECN1	View Gene Set	0.002572	93	0.007131	154	Neighborhood of BECN1	www.broad.mit.e...
Broad MORF_TPR	View Gene Set	0.002644	131	0.007284	155	Neighborhood of TPR	www.broad.mit.e...
Broad MORF_IKBKG	View Gene Set	0.002993	119	0.008181	156	Neighborhood of IKBKG	www.broad.mit.e...
Broad GCM_NPM1	View Gene Set	0.003008	108	0.008181	156	Neighborhood of NPM1	www.broad.mit.e...
Broad MORF_RAB5A	View Gene Set	0.003051	83	0.008245	158	Neighborhood of RAB5A	www.broad.mit.e...
Broad MORF_USP5	View Gene Set	0.003072	46	0.008251	159	Neighborhood of USP5	www.broad.mit.e...
Broad GCM_RAF1	View Gene Set	0.003145	34	0.008394	160	Neighborhood of RAF1	www.broad.mit.e...
Broad MORF_PAPSS1	View Gene Set	0.003213	98	0.008416	161	Neighborhood of PAPSS1	www.broad.mit.e...
Broad MORF_PRKAR1A	View Gene Set	0.003182	133	0.008416	161	Neighborhood of PRKAR1A	www.broad.mit.e...
Broad GCM_UBE2N	View Gene Set	0.003204	125	0.008416	161	Neighborhood of UBE2N	www.broad.mit.e...
Broad GCM_DENR	View Gene Set	0.003384	40	0.008812	164	Neighborhood of DENR	www.broad.mit.e...
Broad MORF_EIF4E	View Gene Set	0.003468	76	0.008975	165	Neighborhood of EIF4E	www.broad.mit.e...
Broad MORF_REV3L	View Gene Set	0.004409	52	0.01127	166	Neighborhood of REV3L	www.broad.mit.e...
Broad GNF2_CBFB	View Gene Set	0.004406	26	0.01127	166	Neighborhood of CBFB	www.broad.mit.e...
Broad MORF_TERF2IP	View Gene Set	0.004597	99	0.01168	168	Neighborhood of TERF2IP	www.broad.mit.e...
Broad GCM_HDAC1	View Gene Set	0.00476	30	0.01203	169	Neighborhood of HDAC1	www.broad.mit.e...
Broad GNF2_RPA1	View Gene Set	0.004853	20	0.01219	170	Neighborhood of RPA1	www.broad.mit.e...
Broad GCM_MYST2	View Gene Set	0.005239	138	0.01308	171	Neighborhood of MYST2	www.broad.mit.e...
Broad GNF2_BUB3	View Gene Set	0.005984	22	0.01486	172	Neighborhood of BUB3	www.broad.mit.e...
Broad GNF2_CD53	View Gene Set	0.006633	54	0.01637	173	Neighborhood of CD53	www.broad.mit.e...
Broad GNF2_DAP3	View Gene Set	0.007016	98	0.01722	174	Neighborhood of DAP3	www.broad.mit.e...
Broad GNF2_MYD88	View Gene Set	0.007396	55	0.01805	175	Neighborhood of MYD88	www.broad.mit.e...
Broad GCM_MAP1B	View Gene Set	0.007793	55	0.01891	176	Neighborhood of MAP1B	www.broad.mit.e...
Broad GCM_PFN1	View Gene Set	0.007937	47	0.01915	177	Neighborhood of PFN1	www.broad.mit.e...
Broad MORF_ATRX	View Gene Set	0.008252	185	0.0198	178	Neighborhood of ATRX	www.broad.mit.e...
Broad GCM_AIP	View Gene Set	0.008336	36	0.01989	179	Neighborhood of AIP	www.broad.mit.e...
Broad GCM_ZNF198	View Gene Set	0.008775	98	0.02082	180	Neighborhood of ZNF198	www.broad.mit.e...
Broad GCM_CALM1	View Gene Set	0.009285	91	0.02191	181	Neighborhood of CALM1	www.broad.mit.e...
Broad GCM_PTK2	View Gene Set	0.01003	126	0.02353	182	Neighborhood of PTK2	www.broad.mit.e...
Broad MORF_MBD4	View Gene Set	0.01031	76	0.02394	183	Neighborhood of MBD4	www.broad.mit.e...
Broad MORF_RAB6A	View Gene Set	0.01032	63	0.02394	183	Neighborhood of RAB6A	www.broad.mit.e...
Broad MORF_XPC	View Gene Set	0.01199	55	0.02768	185	Neighborhood of XPC	www.broad.mit.e...
Broad MORF_TPT1	View Gene Set	0.01207	100	0.0277	186	Neighborhood of TPT1	www.broad.mit.e...
Broad GNF2_EIF3S6	View Gene Set	0.01305	109	0.0298	187	Neighborhood of EIF3S6	www.broad.mit.e...
Broad GNF2_HLA-C	View Gene Set	0.01366	44	0.03102	188	Neighborhood of HLA-C	www.broad.mit.e...
Broad GCM_CBFB	View Gene Set	0.01374	59	0.03105	189	Neighborhood of CBFB	www.broad.mit.e...
Broad GCM_NCAM1	View Gene Set	0.01462	111	0.03285	190	Neighborhood of NCAM1	www.broad.mit.e...
Broad MORF_RPA1	View Gene Set	0.01632	55	0.03649	191	Neighborhood of RPA1	www.broad.mit.e...
Broad MORF_RAP1A	View Gene Set	0.01748	122	0.03887	192	Neighborhood of RAP1A	www.broad.mit.e...
Broad MORF_PRDX3	View Gene Set	0.0179	79	0.03959	193	Neighborhood of PRDX3	www.broad.mit.e...
Broad GCM_PSME1	View Gene Set	0.02095	76	0.04612	194	Neighborhood of PSME1	www.broad.mit.e...
Broad MORF_CUL1	View Gene Set	0.02231	62	0.04884	195	Neighborhood of CUL1	www.broad.mit.e...

Gene Set Collection: Broad.c4.CM

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Broad module_54	View Gene Set	8.897e-31	242	4.039e-28	1	Genes in module_54	www.broad.mit.e...
Broad module_3	View Gene Set	1.364e-21	374	3.097e-19	2	Genes in module_3	www.broad.mit.e...
Broad module_52	View Gene Set	3.967e-20	415	6.003e-18	3	Genes in module_52	www.broad.mit.e...
Broad module_8	View Gene Set	4.445e-18	403	5.045e-16	4	Genes in module_8	www.broad.mit.e...
Broad module_17	View Gene Set	3.711e-17	351	3.37e-15	5	Genes in module_17	www.broad.mit.e...
Broad module_18	View Gene Set	2.746e-16	434	2.078e-14	6	Genes in module_18	www.broad.mit.e...
Broad module_98	View Gene Set	1.295e-14	375	8.402e-13	7	Genes in module_98	www.broad.mit.e...
Broad module_252	View Gene Set	2.948e-14	224	1.673e-12	8	Genes in module_252	www.broad.mit.e...
Broad module_198	View Gene Set	3.899e-14	288	1.967e-12	9	Genes in module_198	www.broad.mit.e...
Broad module_126	View Gene Set	1.647e-13	173	7.478e-12	10	Genes in module_126	www.broad.mit.e...
Broad module_118	View Gene Set	3.505e-13	393	1.446e-11	11	Genes in module_118	www.broad.mit.e...
Broad module_105	View Gene Set	6.5e-13	192	2.459e-11	12	Genes in module_105	www.broad.mit.e...
Broad module_124	View Gene Set	9.536e-12	92	3.33e-10	13	Genes in module_124	www.broad.mit.e...
Broad module_1	View Gene Set	9.801e-11	355	3.178e-09	14	Genes in module_1	www.broad.mit.e...
Broad module_15	View Gene Set	1.117e-10	347	3.382e-09	15	Genes in module_15	www.broad.mit.e...
Broad module_244	View Gene Set	2.391e-10	182	6.786e-09	16	Genes in module_244	www.broad.mit.e...
Broad module_72	View Gene Set	1.606e-09	293	4.288e-08	17	Genes in module_72	www.broad.mit.e...
Broad module_57	View Gene Set	1.85e-09	54	4.667e-08	18	Genes in module_57	www.broad.mit.e...
Broad module_53	View Gene Set	5.023e-09	389	1.2e-07	19	Genes in module_53	www.broad.mit.e...
Broad module_32	View Gene Set	7.235e-09	227	1.642e-07	20	Genes in module_32	www.broad.mit.e...
Broad module_321	View Gene Set	1.493e-08	107	3.228e-07	21	Genes in module_321	www.broad.mit.e...
Broad module_83	View Gene Set	7.477e-08	296	1.543e-06	22	Genes in module_83	www.broad.mit.e...
Broad module_397	View Gene Set	1.652e-07	114	3.262e-06	23	Genes in module_397	www.broad.mit.e...
Broad module_16	View Gene Set	2.497e-07	495	4.724e-06	24	Genes in module_16	www.broad.mit.e...
Broad module_159	View Gene Set	6.856e-07	81	1.245e-05	25	Genes in module_159	www.broad.mit.e...
Broad module_308	View Gene Set	8.314e-07	66	1.452e-05	26	Genes in module_308	www.broad.mit.e...
Broad module_61	View Gene Set	1.037e-06	50	1.744e-05	27	Genes in module_61	www.broad.mit.e...
Broad module_197	View Gene Set	1.226e-06	170	1.988e-05	28	Genes in module_197	www.broad.mit.e...
Broad module_320	View Gene Set	1.652e-06	19	2.586e-05	29	Genes in module_320	www.broad.mit.e...
Broad module_337	View Gene Set	2.483e-06	59	3.758e-05	30	Genes in module_337	www.broad.mit.e...
Broad module_219	View Gene Set	2.623e-06	26	3.842e-05	31	Genes in module_219	www.broad.mit.e...
Broad module_212	View Gene Set	6.837e-06	316	9.7e-05	32	Genes in module_212	www.broad.mit.e...
Broad module_19	View Gene Set	1.068e-05	306	0.0001444	33	Genes in module_19	www.broad.mit.e...
Broad module_293	View Gene Set	1.081e-05	12	0.0001444	33	Genes in module_293	www.broad.mit.e...
Broad module_2	View Gene Set	1.283e-05	373	0.0001618	35	Genes in module_2	www.broad.mit.e...
Broad module_315	View Gene Set	1.266e-05	15	0.0001618	35	Genes in module_315	www.broad.mit.e...
Broad module_114	View Gene Set	1.67e-05	314	0.0002049	37	Genes in module_114	www.broad.mit.e...
Broad module_143	View Gene Set	2.863e-05	14	0.000342	38	Genes in module_143	www.broad.mit.e...
Broad module_151	View Gene Set	3.072e-05	297	0.0003543	39	Genes in module_151	www.broad.mit.e...
Broad module_158	View Gene Set	3.121e-05	41	0.0003543	39	Genes in module_158	www.broad.mit.e...
Broad module_125	View Gene Set	3.669e-05	42	0.0004062	41	Genes in module_125	www.broad.mit.e...
Broad module_144	View Gene Set	6.873e-05	8	0.0007429	42	Genes in module_144	www.broad.mit.e...
Broad module_12	View Gene Set	7.157e-05	346	0.0007556	43	Genes in module_12	www.broad.mit.e...
Broad module_312	View Gene Set	8.905e-05	45	0.0009189	44	Genes in module_312	www.broad.mit.e...
Broad module_102	View Gene Set	0.0001074	18	0.001083	45	Genes in module_102	www.broad.mit.e...
Broad module_457	View Gene Set	0.0001453	9	0.001434	46	Genes in module_457	www.broad.mit.e...
Broad module_332	View Gene Set	0.0001581	35	0.001527	47	Genes in module_332	www.broad.mit.e...
Broad module_47	View Gene Set	0.0001942	216	0.001837	48	Genes in module_47	www.broad.mit.e...
Broad module_78	View Gene Set	0.0002014	20	0.001866	49	Genes in module_78	www.broad.mit.e...
Broad module_392	View Gene Set	0.0003016	18	0.002738	50	Genes in module_392	www.broad.mit.e...
Broad module_149	View Gene Set	0.0003162	36	0.002815	51	Genes in module_149	www.broad.mit.e...
Broad module_403	View Gene Set	0.0003392	44	0.002962	52	Genes in module_403	www.broad.mit.e...
Broad module_152	View Gene Set	0.0003678	121	0.003151	53	Genes in module_152	www.broad.mit.e...
Broad module_87	View Gene Set	0.0006932	44	0.005722	54	Genes in module_87	www.broad.mit.e...
Broad module_357	View Gene Set	0.0006924	78	0.005722	54	Genes in module_357	www.broad.mit.e...
Broad module_323	View Gene Set	0.0007122	54	0.005774	56	Genes in module_323	www.broad.mit.e...
Broad module_451	View Gene Set	0.0008089	29	0.006443	57	Genes in module_451	www.broad.mit.e...
Broad module_6	View Gene Set	0.0008636	403	0.006535	58	Genes in module_6	www.broad.mit.e...
Broad module_115	View Gene Set	0.0008539	27	0.006535	58	Genes in module_115	www.broad.mit.e...
Broad module_155	View Gene Set	0.0008621	25	0.006535	58	Genes in module_155	www.broad.mit.e...
Broad module_352	View Gene Set	0.0008869	17	0.006601	61	Genes in module_352	www.broad.mit.e...
Broad module_21	View Gene Set	0.0009554	10	0.006996	62	Genes in module_21	www.broad.mit.e...
Broad module_439	View Gene Set	0.0009942	20	0.007165	63	Genes in module_439	www.broad.mit.e...
Broad module_297	View Gene Set	0.001037	78	0.007258	64	Genes in module_297	www.broad.mit.e...
Broad module_567	View Gene Set	0.001039	90	0.007258	64	Genes in module_567	www.broad.mit.e...
Broad module_325	View Gene Set	0.001186	46	0.00816	66	Genes in module_325	www.broad.mit.e...
Broad module_183	View Gene Set	0.001231	52	0.00834	67	Genes in module_183	www.broad.mit.e...
Broad module_40	View Gene Set	0.001333	81	0.008769	68	Genes in module_40	www.broad.mit.e...
Broad module_91	View Gene Set	0.001325	37	0.008769	68	Genes in module_91	www.broad.mit.e...
Broad module_474	View Gene Set	0.001416	16	0.009184	70	Genes in module_474	www.broad.mit.e...
Broad module_5	View Gene Set	0.001773	420	0.01103	71	Genes in module_5	www.broad.mit.e...
Broad module_278	View Gene Set	0.001755	34	0.01103	71	Genes in module_278	www.broad.mit.e...
Broad module_509	View Gene Set	0.001751	14	0.01103	71	Genes in module_509	www.broad.mit.e...
Broad module_388	View Gene Set	0.001961	17	0.01203	74	Genes in module_388	www.broad.mit.e...
Broad module_190	View Gene Set	0.002064	12	0.01249	75	Genes in module_190	www.broad.mit.e...
Broad module_254	View Gene Set	0.00218	58	0.01302	76	Genes in module_254	www.broad.mit.e...
Broad module_408	View Gene Set	0.002281	18	0.01345	77	Genes in module_408	www.broad.mit.e...
Broad module_576	View Gene Set	0.002441	104	0.01421	78	Genes in module_576	www.broad.mit.e...
Broad module_81	View Gene Set	0.002581	20	0.01483	79	Genes in module_81	www.broad.mit.e...
Broad module_485	View Gene Set	0.002677	44	0.01519	80	Genes in module_485	www.broad.mit.e...
Broad module_28	View Gene Set	0.002715	32	0.01522	81	Genes in module_28	www.broad.mit.e...
Broad module_235	View Gene Set	0.002798	81	0.01549	82	Genes in module_235	www.broad.mit.e...
Broad module_37	View Gene Set	0.002886	412	0.01579	83	Genes in module_37	www.broad.mit.e...
Broad module_245	View Gene Set	0.003099	26	0.01675	84	Genes in module_245	www.broad.mit.e...
Broad module_38	View Gene Set	0.003395	453	0.01813	85	Genes in module_38	www.broad.mit.e...
Broad module_503	View Gene Set	0.003562	106	0.0188	86	Genes in module_503	www.broad.mit.e...
Broad module_447	View Gene Set	0.003796	35	0.01981	87	Genes in module_447	www.broad.mit.e...
Broad module_82	View Gene Set	0.004147	24	0.02083	88	Genes in module_82	www.broad.mit.e...
Broad module_154	View Gene Set	0.004141	73	0.02083	88	Genes in module_154	www.broad.mit.e...
Broad module_261	View Gene Set	0.004171	91	0.02083	88	Genes in module_261	www.broad.mit.e...
Broad module_525	View Gene Set	0.004174	61	0.02083	88	Genes in module_525	www.broad.mit.e...
Broad module_139	View Gene Set	0.004443	74	0.02169	92	Genes in module_139	www.broad.mit.e...
Broad module_168	View Gene Set	0.004437	22	0.02169	92	Genes in module_168	www.broad.mit.e...
Broad module_222	View Gene Set	0.004705	22	0.02273	94	Genes in module_222	www.broad.mit.e...
Broad module_346	View Gene Set	0.004938	17	0.0236	95	Genes in module_346	www.broad.mit.e...
Broad module_358	View Gene Set	0.005395	72	0.02552	96	Genes in module_358	www.broad.mit.e...
Broad module_421	View Gene Set	0.006288	23	0.02943	97	Genes in module_421	www.broad.mit.e...
Broad module_56	View Gene Set	0.00722	12	0.03295	98	Genes in module_56	www.broad.mit.e...
Broad module_86	View Gene Set	0.007201	43	0.03295	98	Genes in module_86	www.broad.mit.e...
Broad module_310	View Gene Set	0.007257	21	0.03295	98	Genes in module_310	www.broad.mit.e...
Broad module_299	View Gene Set	0.007464	33	0.03355	101	Genes in module_299	www.broad.mit.e...
Broad module_327	View Gene Set	0.008733	21	0.03887	102	Genes in module_327	www.broad.mit.e...
Broad module_36	View Gene Set	0.009041	146	0.03947	103	Genes in module_36	www.broad.mit.e...
Broad module_538	View Gene Set	0.009011	8	0.03947	103	Genes in module_538	www.broad.mit.e...
Broad module_239	View Gene Set	0.009407	112	0.04068	105	Genes in module_239	www.broad.mit.e...
Broad module_147	View Gene Set	0.01067	102	0.04568	106	Genes in module_147	www.broad.mit.e...
Broad module_491	View Gene Set	0.01103	74	0.04679	107	Genes in module_491	www.broad.mit.e...
Broad module_273	View Gene Set	0.01135	50	0.0477	108	Genes in module_273	www.broad.mit.e...

Gene Set Collection: Broad.c5.BP

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Broad NUCLEOBASENUCLEOSIDENUCLEOTIDE_AND_NUCLEIC_ACID_METABOLIC_PROCESS	View Gene Set	2.67e-12	1197	1.864e-09	1	Genes annotated by the GO term GO:0006139. The chemical reactions and pathways involving nucleobases nucleosides nucleotides and nucleic acids.	www.broad.mit.e...
Broad CELL_CYCLE_PROCESS	View Gene Set	4.518e-12	187	1.864e-09	1	Genes annotated by the GO term GO:0022402. A cellular process that is involved in the progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events.	www.broad.mit.e...
Broad CELL_CYCLE_PHASE	View Gene Set	2.471e-10	167	6.794e-08	3	Genes annotated by the GO term GO:0022403. A cell cycle process comprising the steps by which a cell progresses through one of the biochemical and morphological phases and events that occur during successive cell replication or nuclear replication events.	www.broad.mit.e...
Broad CELL_CYCLE_GO_0007049	View Gene Set	5.495e-10	304	1.133e-07	4	Genes annotated by the GO term GO:0007049. The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division.	www.broad.mit.e...
Broad MITOTIC_CELL_CYCLE	View Gene Set	8.308e-10	148	1.371e-07	5	Genes annotated by the GO term GO:0000278. Progression through the phases of the mitotic cell cycle the most common eukaryotic cell cycle which canonically comprises four successive phases called G1 S G2 and M and includes replication of the genome and the subsequent segregation of chromosomes into daughter cells. In some variant cell cycles nuclear replication or nuclear division may not be followed by cell division or G1 and G2 phases may be absent.	www.broad.mit.e...
Broad BIOPOLYMER_METABOLIC_PROCESS	View Gene Set	1.114e-08	1623	1.532e-06	6	Genes annotated by the GO term GO:0043283. The chemical reactions and pathways involving biopolymers long repeating chains of monomers found in nature e.g. polysaccharides and proteins.	www.broad.mit.e...
Broad DNA_METABOLIC_PROCESS	View Gene Set	1.078e-07	253	1.27e-05	7	Genes annotated by the GO term GO:0006259. The chemical reactions and pathways involving DNA deoxyribonucleic acid one of the two main types of nucleic acid consisting of a long unbranched macromolecule formed from one or more commonly two strands of linked deoxyribonucleotides.	www.broad.mit.e...
Broad M_PHASE	View Gene Set	4.247e-07	111	4.38e-05	8	Genes annotated by the GO term GO:0000279. Progression through M phase the part of the cell cycle comprising nuclear division.	www.broad.mit.e...
Broad INTERPHASE_OF_MITOTIC_CELL_CYCLE	View Gene Set	1.05e-06	62	9.621e-05	9	Genes annotated by the GO term GO:0051329. Progression through interphase the stage of cell cycle between successive rounds of mitosis. Canonically interphase is the stage of the cell cycle during which the biochemical and physiologic functions of the cell are performed and replication of chromatin occurs.	www.broad.mit.e...
Broad ORGANELLE_ORGANIZATION_AND_BIOGENESIS	View Gene Set	2.111e-06	458	0.0001583	10	Genes annotated by the GO term GO:0006996. A process that is carried out at the cellular level which results in the formation arrangement of constituent parts or disassembly of any organelle within a cell.	www.broad.mit.e...
Broad INTERPHASE	View Gene Set	2.025e-06	68	0.0001583	10	Genes annotated by the GO term GO:0051325. Progression through interphase the stage of cell cycle between successive rounds of chromosome segregation. Canonically interphase is the stage of the cell cycle during which the biochemical and physiologic functions of the cell are performed and replication of chromatin occurs.	www.broad.mit.e...
Broad M_PHASE_OF_MITOTIC_CELL_CYCLE	View Gene Set	2.88e-06	83	0.000198	12	Genes annotated by the GO term GO:0000087. Progression through M phase the part of the mitotic cell cycle during which mitosis takes place.	www.broad.mit.e...
Broad MITOSIS	View Gene Set	3.345e-06	81	0.0002123	13	Genes annotated by the GO term GO:0007067. Progression through mitosis the division of the eukaryotic cell nucleus to produce two daughter nuclei that usually contain the identical chromosome complement to their mother.	www.broad.mit.e...
Broad RNA_METABOLIC_PROCESS	View Gene Set	4.278e-06	801	0.0002521	14	Genes annotated by the GO term GO:0016070. The chemical reactions and pathways involving RNA ribonucleic acid one of the two main type of nucleic acid consisting of a long unbranched macromolecule formed from ribonucleotides joined in 3' 5'-phosphodiester linkage.	www.broad.mit.e...
Broad RIBONUCLEOPROTEIN_COMPLEX_BIOGENESIS_AND_ASSEMBLY	View Gene Set	8.168e-06	74	0.0004492	15	Genes annotated by the GO term GO:0022613. The cellular process by which a complex containing RNA and proteins is synthesized aggregates and bonds together.	www.broad.mit.e...
Broad PROTEIN_METABOLIC_PROCESS	View Gene Set	9.082e-06	1198	0.0004683	16	Genes annotated by the GO term GO:0019538. The chemical reactions and pathways involving a specific protein rather than of proteins in general. Includes protein modification.	www.broad.mit.e...
Broad RNA_PROCESSING	View Gene Set	1.21e-05	147	0.0005872	17	Genes annotated by the GO term GO:0006396. Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules.	www.broad.mit.e...
Broad REGULATION_OF_METABOLIC_PROCESS	View Gene Set	1.885e-05	779	0.0008641	18	Genes annotated by the GO term GO:0019222. Any process that modulates the frequency rate or extent of the chemical reactions and pathways within a cell or an organism.	www.broad.mit.e...
Broad MACROMOLECULAR_COMPLEX_ASSEMBLY	View Gene Set	2.069e-05	271	0.0008982	19	Genes annotated by the GO term GO:0065003. The aggregation arrangement and bonding together of a set of macromolecules to form a complex.	www.broad.mit.e...
Broad REGULATION_OF_CELLULAR_METABOLIC_PROCESS	View Gene Set	2.536e-05	767	0.001046	20	Genes annotated by the GO term GO:0031323. Any process that modulates the frequency rate or extent of the chemical reactions and pathways by which individual cells transform chemical substances.	www.broad.mit.e...
Broad DNA_REPLICATION	View Gene Set	4.304e-05	101	0.001691	21	Genes annotated by the GO term GO:0006260. The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA.	www.broad.mit.e...
Broad NITROGEN_COMPOUND_METABOLIC_PROCESS	View Gene Set	7.59e-05	150	0.002846	22	Genes annotated by the GO term GO:0006807. The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation nitrification denitrification assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium.	www.broad.mit.e...
Broad RESPONSE_TO_ENDOGENOUS_STIMULUS	View Gene Set	8.294e-05	197	0.002975	23	Genes annotated by the GO term GO:0009719. A change in state or activity of a cell or an organism (in terms of movement secretion enzyme production gene expression etc.) as a result of an endogenous stimulus.	www.broad.mit.e...
Broad PROTEIN_RNA_COMPLEX_ASSEMBLY	View Gene Set	8.905e-05	59	0.003061	24	Genes annotated by the GO term GO:0022618. The aggregation arrangement and bonding together of proteins and RNA molecules to form a ribonucleoprotein complex.	www.broad.mit.e...
Broad CELLULAR_COMPONENT_ASSEMBLY	View Gene Set	9.738e-05	288	0.00309	25	Genes annotated by the GO term GO:0022607. A cellular process that results in the assembly of a part of the cell.	www.broad.mit.e...
Broad RESPONSE_TO_DNA_DAMAGE_STIMULUS	View Gene Set	9.44e-05	159	0.00309	25	Genes annotated by the GO term GO:0006974. A change in state or activity of a cell or an organism (in terms of movement secretion enzyme production gene expression etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism.	www.broad.mit.e...
Broad RRNA_PROCESSING	View Gene Set	0.0001197	11	0.003659	27	Genes annotated by the GO term GO:0006364. Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules.	www.broad.mit.e...
Broad CHROMOSOME_SEGREGATION	View Gene Set	0.0001391	31	0.004098	28	Genes annotated by the GO term GO:0007059. The process by which genetic material in the form of chromosomes is organized and then physically separated and apportioned to two or more sets.	www.broad.mit.e...
Broad REGULATION_OF_GENE_EXPRESSION	View Gene Set	0.000146	660	0.004154	29	Genes annotated by the GO term GO:0010468. Any process that modulates the frequency rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form.	www.broad.mit.e...
Broad CELLULAR_PROTEIN_METABOLIC_PROCESS	View Gene Set	0.0001927	1085	0.005128	30	Genes annotated by the GO term GO:0044267. The chemical reactions and pathways involving a specific protein rather than of proteins in general occurring at the level of an individual cell. Includes protein modification.	www.broad.mit.e...
Broad RIBOSOME_BIOGENESIS_AND_ASSEMBLY	View Gene Set	0.0001905	14	0.005128	30	Genes annotated by the GO term GO:0042254. The process of the formation of the constituents of the ribosome subunits their assembly and their transport to the sites of protein synthesis.	www.broad.mit.e...
Broad CHROMOSOME_ORGANIZATION_AND_BIOGENESIS	View Gene Set	0.0002202	117	0.005676	32	Genes annotated by the GO term GO:0051276. A process that is carried out at the cellular level that results in the formation arrangement of constituent parts or disassembly of chromosomes structures composed of a very long molecule of DNA and associated proteins that carries hereditary information.	www.broad.mit.e...
Broad REGULATION_OF_CELL_CYCLE	View Gene Set	0.0002611	176	0.006335	33	Genes annotated by the GO term GO:0051726. Any process that modulates the rate or extent of progression through the cell cycle.	www.broad.mit.e...
Broad RRNA_METABOLIC_PROCESS	View Gene Set	0.0002601	12	0.006335	33	Genes annotated by the GO term GO:0016072. The chemical reactions and pathways involving rRNA ribosomal RNA a structural constituent of ribosomes.	www.broad.mit.e...
Broad TRANSLATIONAL_INITIATION	View Gene Set	0.000314	39	0.007402	35	Genes annotated by the GO term GO:0006413. The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome mRNA and an initiation complex that contains the first aminoacyl-tRNA.	www.broad.mit.e...
Broad REGULATION_OF_NUCLEOBASENUCLEOSIDENUCLEOTIDE_AND_NUCLEIC_ACID_METABOLIC_PROCESS	View Gene Set	0.0003336	601	0.007438	36	Genes annotated by the GO term GO:0019219. Any process that modulates the frequency rate or extent of the chemical reactions and pathways involving nucleobases nucleosides nucleotides and nucleic acids.	www.broad.mit.e...
Broad RNA_SPLICING	View Gene Set	0.0003299	73	0.007438	36	Genes annotated by the GO term GO:0008380. The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA.	www.broad.mit.e...
Broad REGULATION_OF_TRANSLATIONAL_INITIATION	View Gene Set	0.000435	31	0.009444	38	Genes annotated by the GO term GO:0006446. Any process that modulates the frequency rate or extent of translational initiation.	www.broad.mit.e...
Broad TRANSCRIPTION	View Gene Set	0.0004553	738	0.009631	39	Genes annotated by the GO term GO:0006350. The synthesis of either RNA on a template of DNA or DNA on a template of RNA.	www.broad.mit.e...
Broad CELLULAR_MACROMOLECULE_METABOLIC_PROCESS	View Gene Set	0.0004818	1099	0.009938	40	Genes annotated by the GO term GO:0044260. The chemical reactions and pathways involving macromolecules large molecules including proteins nucleic acids and carbohydrates as carried out by individual cells.	www.broad.mit.e...
Broad DNA_INTEGRITY_CHECKPOINT	View Gene Set	0.0005734	23	0.01154	41	Genes annotated by the GO term GO:0031570. Any cell cycle checkpoint that delays or arrests cell cycle progression in response to changes in DNA structure.	www.broad.mit.e...
Broad ORGANIC_ACID_METABOLIC_PROCESS	View Gene Set	0.0006318	175	0.01241	42	Genes annotated by the GO term GO:0006082. The chemical reactions and pathways involving organic acids any acidic compound containing carbon in covalent linkage.	www.broad.mit.e...
Broad CELL_CYCLE_CHECKPOINT_GO_0000075	View Gene Set	0.0007228	47	0.01387	43	Genes annotated by the GO term GO:0000075. A point in the eukaryotic cell cycle where progress through the cycle can be halted until conditions are suitable for the cell to proceed to the next stage.	www.broad.mit.e...
Broad MICROTUBULE_BASED_PROCESS	View Gene Set	0.0007499	80	0.01406	44	Genes annotated by the GO term GO:0007017. Any cellular process that depends upon or alters the microtubule cytoskeleton that part of the cytoskeleton comprising microtubules and their associated proteins.	www.broad.mit.e...
Broad G1_S_TRANSITION_OF_MITOTIC_CELL_CYCLE	View Gene Set	0.0008161	27	0.01496	45	Genes annotated by the GO term GO:0000082. Progression from G1 phase to S phase of the mitotic cell cycle.	www.broad.mit.e...
Broad NEGATIVE_REGULATION_OF_CELLULAR_METABOLIC_PROCESS	View Gene Set	0.0008701	252	0.0156	46	Genes annotated by the GO term GO:0031324. Any process that stops prevents or reduces the frequency rate or extent of the chemical reactions and pathways by which individual cells transform chemical substances.	www.broad.mit.e...
Broad DNA_REPAIR	View Gene Set	0.0009554	123	0.01642	47	Genes annotated by the GO term GO:0006281. The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations chemical mutagens fungal and bacterial toxins etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal base excision repair nucleotide excision repair photoreactivation bypass double-strand break repair pathway and mismatch repair pathway.	www.broad.mit.e...
Broad NEGATIVE_REGULATION_OF_METABOLIC_PROCESS	View Gene Set	0.0009448	255	0.01642	47	Genes annotated by the GO term GO:0009892. Any process that stops prevents or reduces the frequency rate or extent of the chemical reactions and pathways within a cell or an organism.	www.broad.mit.e...
Broad AMINO_ACID_AND_DERIVATIVE_METABOLIC_PROCESS	View Gene Set	0.00123	98	0.02071	49	Genes annotated by the GO term GO:0006519. The chemical reactions and pathways involving amino acids organic acids containing one or more amino substituents and compounds derived from amino acids.	www.broad.mit.e...
Broad CARBOXYLIC_ACID_METABOLIC_PROCESS	View Gene Set	0.001313	173	0.02166	50	Genes annotated by the GO term GO:0019752. The chemical reactions and pathways involving carboxylic acids any organic acid containing one or more carboxyl (COOH) groups or anions (COO-).	www.broad.mit.e...
Broad REGULATION_OF_G_PROTEIN_COUPLED_RECEPTOR_PROTEIN_SIGNALING_PATHWAY	View Gene Set	0.001588	23	0.02569	51	Genes annotated by the GO term GO:0008277. Any process that modulates the frequency rate or extent of G-protein coupled receptor protein signaling pathway activity.	www.broad.mit.e...
Broad REGULATION_OF_TRANSCRIPTION_FROM_RNA_POLYMERASE_II_PROMOTER	View Gene Set	0.001773	285	0.02812	52	Genes annotated by the GO term GO:0006357. Any process that modulates the frequency rate or extent of transcription from an RNA polymerase II promoter.	www.broad.mit.e...
Broad NEGATIVE_REGULATION_OF_CYTOSKELETON_ORGANIZATION_AND_BIOGENESIS	View Gene Set	0.001809	10	0.02816	53	Genes annotated by the GO term GO:0051494. Any process that stops prevents or reduces the frequency rate or extent of the formation arrangement of constituent parts or disassembly of cytoskeletal structures.	www.broad.mit.e...
Broad REGULATION_OF_TRANSCRIPTION	View Gene Set	0.001995	555	0.03047	54	Genes annotated by the GO term GO:0045449. Any process that modulates the frequency rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA.	www.broad.mit.e...
Broad TRANSCRIPTION_DNA_DEPENDENT	View Gene Set	0.002468	623	0.03577	55	Genes annotated by the GO term GO:0006351. The synthesis of RNA on a template of DNA.	www.broad.mit.e...
Broad AMINO_ACID_METABOLIC_PROCESS	View Gene Set	0.002471	75	0.03577	55	Genes annotated by the GO term GO:0006520. The chemical reactions and pathways involving amino acids organic acids containing one or more amino substituents.	www.broad.mit.e...
Broad REGULATION_OF_CYCLIN_DEPENDENT_PROTEIN_KINASE_ACTIVITY	View Gene Set	0.00242	42	0.03577	55	Genes annotated by the GO term GO:0000079. Any process that modulates the frequency rate or extent of CDK activity.	www.broad.mit.e...
Broad REGULATION_OF_DNA_REPLICATION	View Gene Set	0.002528	19	0.03596	58	Genes annotated by the GO term GO:0006275. Any process that modulates the frequency rate or extent of DNA replication.	www.broad.mit.e...
Broad PROTEIN_COMPLEX_ASSEMBLY	View Gene Set	0.002629	167	0.03676	59	Genes annotated by the GO term GO:0006461. The aggregation arrangement and bonding together of a set of components to form a protein complex.	www.broad.mit.e...
Broad RNA_BIOSYNTHETIC_PROCESS	View Gene Set	0.002759	625	0.03794	60	Genes annotated by the GO term GO:0032774. The chemical reactions and pathways resulting in the formation of RNA ribonucleic acid one of the two main type of nucleic acid consisting of a long unbranched macromolecule formed from ribonucleotides joined in 3' 5'-phosphodiester linkage. Includes polymerization of ribonucleotide monomers.	www.broad.mit.e...
Broad DNA_DEPENDENT_DNA_REPLICATION	View Gene Set	0.002942	55	0.03935	61	Genes annotated by the GO term GO:0006261. The process whereby new strands of DNA are synthesized using parental DNA as a template for the DNA-dependent DNA polymerases that synthesize the new strands.	www.broad.mit.e...
Broad DNA_DAMAGE_RESPONSESIGNAL_TRANSDUCTION_BY_P53_CLASS_MEDIATOR	View Gene Set	0.002957	12	0.03935	61	Genes annotated by the GO term GO:0030330. A cascade of processes induced by the cell cycle regulator phosphoprotein p53 or an equivalent protein in response to the detection of DNA damage.	www.broad.mit.e...
Broad PROTEIN_FOLDING	View Gene Set	0.003102	56	0.04063	63	Genes annotated by the GO term GO:0006457. The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.	www.broad.mit.e...
Broad NEGATIVE_REGULATION_OF_NUCLEOBASENUCLEOSIDENUCLEOTIDE_AND_NUCLEIC_ACID_METABOLIC_PROCESS	View Gene Set	0.003227	205	0.0416	64	Genes annotated by the GO term GO:0045934. Any process that stops prevents or reduces the frequency rate or extent of the chemical reactions and pathways involving nucleobases nucleosides nucleotides and nucleic acids.	www.broad.mit.e...
Broad NEGATIVE_REGULATION_OF_CELLULAR_COMPONENT_ORGANIZATION_AND_BIOGENESIS	View Gene Set	0.003559	27	0.04517	65	Genes annotated by the GO term GO:0051129. Any process that stops prevents or reduces the frequency rate or extent of the processes involved in the formation arrangement of constituent parts or disassembly of cell structures including the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope.	www.broad.mit.e...
Broad DNA_DAMAGE_CHECKPOINT	View Gene Set	0.00367	20	0.04587	66	Genes annotated by the GO term GO:0000077. A signal transduction pathway induced by DNA damage that blocks cell cycle progression (in G1 G2 or metaphase) or slows the rate at which S phase proceeds.	www.broad.mit.e...
Broad TRANSCRIPTION_FROM_RNA_POLYMERASE_III_PROMOTER	View Gene Set	0.003734	19	0.04598	67	Genes annotated by the GO term GO:0006383. The synthesis of RNA from a DNA template by RNA polymerase III (Pol III) originating at a Pol III-specific promoter.	www.broad.mit.e...
Broad CELLULAR_BIOSYNTHETIC_PROCESS	View Gene Set	0.003828	311	0.04644	68	Genes annotated by the GO term GO:0044249. The chemical reactions and pathways resulting in the formation of substances carried out by individual cells.	www.broad.mit.e...
Broad REGULATION_OF_PROTEIN_METABOLIC_PROCESS	View Gene Set	0.003981	171	0.04759	69	Genes annotated by the GO term GO:0051246. Any process that modulates the frequency rate or extent of the chemical reactions and pathways involving a protein.	www.broad.mit.e...

Gene Set Collection: Broad.c5.CC

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Broad CYTOPLASM	View Gene Set	2.287e-29	2054	5.329e-27	1	Genes annotated by the GO term GO:0005737. All of the contents of a cell excluding the plasma membrane and nucleus but including other subcellular structures.	www.broad.mit.e...
Broad CYTOPLASMIC_PART	View Gene Set	3.898e-21	1350	3.448e-19	2	Genes annotated by the GO term GO:0044444. Any constituent part of the cytoplasm all of the contents of a cell excluding the plasma membrane and nucleus but including other subcellular structures.	www.broad.mit.e...
Broad NUCLEUS	View Gene Set	4.439e-21	1353	3.448e-19	2	Genes annotated by the GO term GO:0005634. A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells the nucleus contains all of the cell's chromosomes except the organellar chromosomes and is the site of RNA synthesis and processing. In some species or in specialized cell types RNA metabolism or DNA replication may be absent.	www.broad.mit.e...
Broad ORGANELLE_PART	View Gene Set	3.912e-19	1149	2.24e-17	4	Genes annotated by the GO term GO:0044422. Any constituent part of an organelle an organized structure of distinctive morphology and function. Includes constituent parts of the nucleus mitochondria plastids vacuoles vesicles ribosomes and the cytoskeleton but excludes the plasma membrane.	www.broad.mit.e...
Broad INTRACELLULAR_ORGANELLE_PART	View Gene Set	4.806e-19	1144	2.24e-17	4	Genes annotated by the GO term GO:0044446. A constituent part of an intracellular organelle an organized structure of distinctive morphology and function occurring within the cell. Includes constituent parts of the nucleus mitochondria plastids vacuoles vesicles ribosomes and the cytoskeleton but excludes the plasma membrane.	www.broad.mit.e...
Broad NUCLEAR_PART	View Gene Set	1.198e-11	543	4.064e-10	6	Genes annotated by the GO term GO:0044428. Any constituent part of the nucleus a membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated.	www.broad.mit.e...
Broad NON_MEMBRANE_BOUND_ORGANELLE	View Gene Set	1.395e-11	613	4.064e-10	6	Genes annotated by the GO term GO:0043228. Organized structure of distinctive morphology and function not bounded by a lipid bilayer membrane. Includes ribosomes the cytoskeleton and chromosomes.	www.broad.mit.e...
Broad INTRACELLULAR_NON_MEMBRANE_BOUND_ORGANELLE	View Gene Set	1.395e-11	613	4.064e-10	6	Genes annotated by the GO term GO:0043232. Organized structure of distinctive morphology and function not bounded by a lipid bilayer membrane and occurring within the cell. Includes ribosomes the cytoskeleton and chromosomes.	www.broad.mit.e...
Broad MITOCHONDRION	View Gene Set	2.855e-11	335	7.392e-10	9	Genes annotated by the GO term GO:0005739. A semiautonomous self replicating organelle that occurs in varying numbers shapes and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.	www.broad.mit.e...
Broad MACROMOLECULAR_COMPLEX	View Gene Set	6.286e-10	914	1.465e-08	10	Genes annotated by the GO term GO:0032991. A stable assembly of two or more macromolecules i.e. proteins nucleic acids carbohydrates or lipids in which the constituent parts function together.	www.broad.mit.e...
Broad SPINDLE	View Gene Set	1.271e-07	37	2.693e-06	11	Genes annotated by the GO term GO:0005819. The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart.	www.broad.mit.e...
Broad ORGANELLE_LUMEN	View Gene Set	4.551e-07	434	8.157e-06	12	Genes annotated by the GO term GO:0043233. The volume enclosed by the membranes of a particular organelle e.g. endoplasmic reticulum lumen or the space between the two lipid bilayers of a double membrane surrounding an organelle e.g. nuclear membrane lumen.	www.broad.mit.e...
Broad MEMBRANE_ENCLOSED_LUMEN	View Gene Set	4.551e-07	434	8.157e-06	12	Genes annotated by the GO term GO:0031974. The enclosed volume within a sealed membrane or between two sealed membranes.	www.broad.mit.e...
Broad PROTEIN_COMPLEX	View Gene Set	1.108e-06	799	1.843e-05	14	Genes annotated by the GO term GO:0043234. Any protein group composed of two or more subunits which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups such as nucleic acids metal ions or carbohydrate groups.	www.broad.mit.e...
Broad RIBONUCLEOPROTEIN_COMPLEX	View Gene Set	1.236e-06	129	1.92e-05	15	Genes annotated by the GO term GO:0030529. A macromolecular complex containing both protein and RNA molecules.	www.broad.mit.e...
Broad CHROMOSOME	View Gene Set	1.868e-06	122	2.721e-05	16	Genes annotated by the GO term GO:0005694. A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information.	www.broad.mit.e...
Broad NUCLEOLUS	View Gene Set	2.405e-06	116	3.297e-05	17	Genes annotated by the GO term GO:0005730. A small dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein is not bounded by a limiting membrane and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA the processing of this RNA into 5.8S 18S and 28S components of ribosomal RNA and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome.	www.broad.mit.e...
Broad ENDOPLASMIC_RETICULUM	View Gene Set	5.756e-06	282	7.451e-05	18	Genes annotated by the GO term GO:0005783. The irregular network of unit membranes visible only by electron microscopy that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels which are often expanded into slitlike cavities called cisternae. The ER takes two forms rough (or granular) with ribosomes adhering to the outer surface and smooth (with no ribosomes attached).	www.broad.mit.e...
Broad NUCLEAR_LUMEN	View Gene Set	9.863e-06	365	0.0001209	19	Genes annotated by the GO term GO:0031981. The volume enclosed by the nuclear inner membrane.	www.broad.mit.e...
Broad CHROMOSOMAL_PART	View Gene Set	1.398e-05	95	0.0001628	20	Genes annotated by the GO term GO:0044427. Any constituent part of a chromosome a structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information.	www.broad.mit.e...
Broad MICROTUBULE_CYTOSKELETON	View Gene Set	2.712e-05	146	0.0003009	21	Genes annotated by the GO term GO:0015630. The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins.	www.broad.mit.e...
Broad PROTEASOME_COMPLEX	View Gene Set	2.843e-05	23	0.0003011	22	Genes annotated by the GO term GO:0000502. A large multisubunit complex which catalyzes protein degradation. This complex consists of the barrel shaped proteasome core complex and one or two associated proteins or complexes that act in regulating entry into or exit from the core.	www.broad.mit.e...
Broad CYTOSKELETAL_PART	View Gene Set	3.497e-05	231	0.0003543	23	Genes annotated by the GO term GO:0044430. Any constituent part of the cytoskeleton a cellular scaffolding or skeleton that maintains cell shape enables some cell motion (using structures such as flagella and cilia) and plays important roles in both intra-cellular transport (e.g. the movement of vesicles and organelles) and cellular division. Includes constituent parts of intermediate filaments microfilaments microtubules and the microtrabecular lattice.	www.broad.mit.e...
Broad ORGANELLE_MEMBRANE	View Gene Set	5.824e-05	290	0.0005654	24	Genes annotated by the GO term GO:0031090. The lipid bilayer surrounding an organelle.	www.broad.mit.e...
Broad CHROMOSOMEPERICENTRIC_REGION	View Gene Set	7.875e-05	31	0.0007339	25	Genes annotated by the GO term GO:0000775. The central region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes this region corresponds to a single area of the chromosome whereas in holocentric chromosomes it is evenly distributed along the chromosome.	www.broad.mit.e...
Broad CYTOSKELETON	View Gene Set	0.0001015	359	0.0009092	26	Genes annotated by the GO term GO:0005856. Any of the various filamentous elements that form the internal framework of cells and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments microfilaments microtubules the microtrabecular lattice and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions including cellular movement cell division endocytosis and movement of organelles.	www.broad.mit.e...
Broad KINETOCHORE	View Gene Set	0.0001464	25	0.001263	27	Genes annotated by the GO term GO:0000776. A multisubunit complex that is located at the pericentric region of DNA and provides an attachment point for the spindle microtubules.	www.broad.mit.e...
Broad CONDENSED_CHROMOSOME	View Gene Set	0.0001647	32	0.001371	28	Genes annotated by the GO term GO:0000793. A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure.	www.broad.mit.e...
Broad ENVELOPE	View Gene Set	0.0001937	165	0.001505	29	Genes annotated by the GO term GO:0031975. A multilayered structure surrounding all or part of a cell; encompasses one or more lipid bilayers and may include a cell wall layer also includes the space between layers.	www.broad.mit.e...
Broad ORGANELLE_ENVELOPE	View Gene Set	0.0001937	165	0.001505	29	Genes annotated by the GO term GO:0031967. A double membrane structure enclosing an organelle including two lipid bilayers and the region between them. In some cases an organelle envelope may have more than two membranes.	www.broad.mit.e...
Broad NUCLEAR_PORE	View Gene Set	0.0002478	29	0.001863	31	Genes annotated by the GO term GO:0005643. Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell where the inner and outer nuclear membranes are joined.	www.broad.mit.e...
Broad PERINUCLEAR_REGION_OF_CYTOPLASM	View Gene Set	0.0002756	55	0.002007	32	Genes annotated by the GO term GO:0048471. Cytoplasm situated near or occurring around the nucleus.	www.broad.mit.e...
Broad PORE_COMPLEX	View Gene Set	0.0007296	34	0.005152	33	Genes annotated by the GO term GO:0046930. Any small opening in a membrane that allows the passage of gases and/or liquids.	www.broad.mit.e...
Broad SPINDLE_POLE	View Gene Set	0.0007619	17	0.005221	34	Genes annotated by the GO term GO:0000922. Either of the ends of a spindle where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules spindle microtubules and astral microtubules.	www.broad.mit.e...
Broad SPLICEOSOME	View Gene Set	0.0009596	44	0.006388	35	Genes annotated by the GO term GO:0005681. A ribonucleoprotein complex containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron.	www.broad.mit.e...
Broad ENDOMEMBRANE_SYSTEM	View Gene Set	0.001225	213	0.007927	36	Genes annotated by the GO term GO:0012505. A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum Golgi bodies vesicles cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles.	www.broad.mit.e...
Broad NUCLEAR_ENVELOPE	View Gene Set	0.001438	71	0.009059	37	Genes annotated by the GO term GO:0005635. The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space a gap of width 20-40 nm (also called the perinuclear space).	www.broad.mit.e...
Broad NUCLEAR_MEMBRANE	View Gene Set	0.001524	48	0.009343	38	Genes annotated by the GO term GO:0031965. Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space.	www.broad.mit.e...
Broad NUCLEAR_UBIQUITIN_LIGASE_COMPLEX	View Gene Set	0.001923	11	0.01149	39	Genes annotated by the GO term GO:0000152. A ubiquitin ligase complex found in the nucleus.	www.broad.mit.e...
Broad MITOCHONDRIAL_PART	View Gene Set	0.004246	140	0.02449	40	Genes annotated by the GO term GO:0044429. Any constituent part of a mitochondrion a semiautonomous self replicating organelle that occurs in varying numbers shapes and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.	www.broad.mit.e...
Broad SMALL_NUCLEAR_RIBONUCLEOPROTEIN_COMPLEX	View Gene Set	0.004309	20	0.02449	40	Genes annotated by the GO term GO:0030532. A complex composed of RNA of the small nuclear RNA (snRNA) class and protein found in the nucleus of a eukaryotic cell. These are typically named after the snRNA(s) they contain e.g. U1 snRNP or U4/U6 snRNP. Many but not all of these complexes are involved in splicing of nuclear mRNAs.	www.broad.mit.e...
Broad NUCLEAR_MEMBRANE_PART	View Gene Set	0.004566	40	0.02533	42	Genes annotated by the GO term GO:0044453. Any constituent part of the nuclear membrane the envelope that surrounds the nucleus of eukaryotic cells.	www.broad.mit.e...
Broad NUCLEOPLASM	View Gene Set	0.004953	266	0.02684	43	Genes annotated by the GO term GO:0005654. That part of the nuclear content other than the chromosomes or the nucleolus.	www.broad.mit.e...
Broad ENDOSOME	View Gene Set	0.006005	64	0.0318	44	Genes annotated by the GO term GO:0005768. A membrane-bound organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation.	www.broad.mit.e...
Broad LATE_ENDOSOME	View Gene Set	0.006828	12	0.03535	45	Genes annotated by the GO term GO:0005770. A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear being concentrated near the microtubule organizing center.	www.broad.mit.e...
Broad CYTOSOL	View Gene Set	0.008541	203	0.04326	46	Genes annotated by the GO term GO:0005829. That part of the cytoplasm that does not contain membranous or particulate subcellular components.	www.broad.mit.e...
Broad RUFFLE	View Gene Set	0.00903	31	0.04476	47	Genes annotated by the GO term GO:0001726. Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork.	www.broad.mit.e...

Gene Set Collection: Broad.c5.MF

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: PMID

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Broad RNA_BINDING	View Gene Set	2.224e-06	236	0.0008807	1	Genes annotated by the GO term GO:0003723. Interacting selectively with an RNA molecule or a portion thereof.	www.broad.mit.e...
Broad TRANSLATION_REGULATOR_ACTIVITY	View Gene Set	6.573e-05	41	0.01089	2	Genes annotated by the GO term GO:0045182. Any substance involved in the initiation activation perpetuation repression or termination of polypeptide synthesis at the ribosome.	www.broad.mit.e...
Broad TRANSLATION_FACTOR_ACTIVITY_NUCLEIC_ACID_BINDING	View Gene Set	8.25e-05	39	0.01089	2	Genes annotated by the GO term GO:0008135. Functions during translation by binding nucleic acids during polypeptide synthesis at the ribosome.	www.broad.mit.e...
Broad UNFOLDED_PROTEIN_BINDING	View Gene Set	0.0001139	41	0.01127	4	Genes annotated by the GO term GO:0051082. Interacting selectively with an unfolded protein.	www.broad.mit.e...
Broad TRANSFERASE_ACTIVITY_TRANSFERRING_ONE_CARBON_GROUPS	View Gene Set	0.0001465	37	0.01161	5	Genes annotated by the GO term GO:0016741. Catalysis of the transfer of a one-carbon group from one compound (donor) to another (acceptor).	www.broad.mit.e...
Broad TRANSLATION_INITIATION_FACTOR_ACTIVITY	View Gene Set	0.000189	24	0.01247	6	Genes annotated by the GO term GO:0003743. Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide.	www.broad.mit.e...
Broad GTP_BINDING	View Gene Set	0.0003472	46	0.01719	7	Genes annotated by the GO term GO:0005525. Interacting selectively with GTP guanosine triphosphate.	www.broad.mit.e...
Broad METHYLTRANSFERASE_ACTIVITY	View Gene Set	0.00033	36	0.01719	7	Genes annotated by the GO term GO:0008168. Catalysis of the transfer of a methyl group to an acceptor molecule.	www.broad.mit.e...
Broad GUANYL_NUCLEOTIDE_BINDING	View Gene Set	0.0004262	47	0.01875	9	Genes annotated by the GO term GO:0019001. Interacting selectively with guanyl nucleotides any compound consisting of guanosine esterified with (ortho)phosphate.	www.broad.mit.e...
Broad HYDROLASE_ACTIVITY_ACTING_ON_ACID_ANHYDRIDES	View Gene Set	0.001321	224	0.04393	10	Genes annotated by the GO term GO:0016817. Catalysis of the hydrolysis of any acid anhydride.	www.broad.mit.e...
Broad NUCLEOTIDYLTRANSFERASE_ACTIVITY	View Gene Set	0.001192	47	0.04393	10	Genes annotated by the GO term GO:0016779. Catalysis of the transfer of a nucleotidyl group to a reactant.	www.broad.mit.e...
Broad NUCLEOSIDE_TRIPHOSPHATASE_ACTIVITY	View Gene Set	0.001331	208	0.04393	10	Genes annotated by the GO term GO:0017111. Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate.	www.broad.mit.e...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
PMID 15635413	View Gene Set	3.262e-23	421	8.177e-20	1	Nucleolar proteome dynamics.	www.ncbi.nlm.ni...
PMID 12429849	View Gene Set	1.114e-21	106	1.396e-18	2	Functional proteomic analysis of human nucleolus.	www.ncbi.nlm.ni...
PMID 11790298	View Gene Set	4.24e-17	208	3.543e-14	3	Directed proteomic analysis of the human nucleolus.	www.ncbi.nlm.ni...
PMID 17643375	View Gene Set	1.035e-16	391	6.486e-14	4	Systematic analysis of the protein interaction network for the human transcription machinery reveals the identity of the 7SK capping enzyme.	www.ncbi.nlm.ni...
PMID 16565220	View Gene Set	2.293e-16	210	1.15e-13	5	Phosphoproteome analysis of the human mitotic spindle.	www.ncbi.nlm.ni...
PMID 16964243	View Gene Set	5.932e-16	504	2.479e-13	6	A probability-based approach for high-throughput protein phosphorylation analysis and site localization.	www.ncbi.nlm.ni...
PMID 15302935	View Gene Set	1.363e-13	773	4.881e-11	7	Large-scale characterization of HeLa cell nuclear phosphoproteins.	www.ncbi.nlm.ni...
PMID 11042152	View Gene Set	1.095e-11	315	3.433e-09	8	Cloning and functional analysis of cDNAs with open reading frames for 300 previously undefined genes expressed in CD34+ hematopoietic stem/progenitor cells.	www.ncbi.nlm.ni...
PMID 12226669	View Gene Set	2.988e-10	108	8.324e-08	9	Comprehensive proteomic analysis of the human spliceosome.	www.ncbi.nlm.ni...
PMID 10810093	View Gene Set	1.394e-09	151	3.495e-07	10	Identification of novel human genes evolutionarily conserved in Caenorhabditis elegans by comparative proteomics.	www.ncbi.nlm.ni...
PMID 16236267	View Gene Set	6.824e-09	77	1.555e-06	11	Proteomic analysis of SUMO4 substrates in HEK293 cells under serum starvation-induced stress.	www.ncbi.nlm.ni...
PMID 20508983	View Gene Set	6.945e-08	102	1.451e-05	12	Centrosome-related genes genetic variation and risk of breast cancer.	www.ncbi.nlm.ni...
PMID 8619474	View Gene Set	8.367e-08	534	1.614e-05	13	A "double adaptor" method for improved shotgun library construction.	www.ncbi.nlm.ni...
PMID 8084338	View Gene Set	1.206e-07	21	2.159e-05	14	HIV-1 gp41 binding proteins and antibodies to gp41 could inhibit enhancement of human Raji cell MHC class I and II expression by gp41.	www.ncbi.nlm.ni...
PMID 15952740	View Gene Set	2.049e-07	58	3.424e-05	15	Protein profiling of human pancreatic islets by two-dimensional gel electrophoresis and mass spectrometry.	www.ncbi.nlm.ni...
PMID 9110174	View Gene Set	2.439e-07	528	3.821e-05	16	Large-scale concatenation cDNA sequencing.	www.ncbi.nlm.ni...
PMID 11991638	View Gene Set	2.637e-07	74	3.888e-05	17	Purification and characterization of native spliceosomes suitable for three-dimensional structural analysis.	www.ncbi.nlm.ni...
PMID 14559993	View Gene Set	3.168e-07	51	4.413e-05	18	Regulation of alternative splicing by SRrp86 and its interacting proteins.	www.ncbi.nlm.ni...
PMID 12427289	View Gene Set	4.433e-07	20	5.46e-05	19	HIV-1 gp120 modulates the immunological function and expression of accessory and co-stimulatory molecules of monocyte-derived dendritic cells.	www.ncbi.nlm.ni...
PMID 15592455	View Gene Set	4.552e-07	317	5.46e-05	19	Immunoaffinity profiling of tyrosine phosphorylation in cancer cells.	www.ncbi.nlm.ni...
PMID 16712791	View Gene Set	4.573e-07	342	5.46e-05	19	Identification of intrahepatic cholangiocarcinoma related genes by comparison with normal liver tissues using expressed sequence tags.	www.ncbi.nlm.ni...
PMID 11931757	View Gene Set	6.943e-07	22	7.912e-05	22	Human origin recognition complex large subunit is degraded by ubiquitin-mediated proteolysis after initiation of DNA replication.	www.ncbi.nlm.ni...
PMID 11285280	View Gene Set	8.066e-07	62	8.792e-05	23	Anaphase-promoting complex/cyclosome-dependent proteolysis of human cyclin A starts at the beginning of mitosis and is not subject to the spindle assembly checkpoint.	www.ncbi.nlm.ni...
PMID 15231747	View Gene Set	9.067e-07	212	9.471e-05	24	A protein interaction framework for human mRNA degradation.	www.ncbi.nlm.ni...
PMID 11256614	View Gene Set	9.826e-07	522	9.853e-05	25	Systematic subcellular localization of novel proteins identified by large-scale cDNA sequencing.	www.ncbi.nlm.ni...
PMID 12234937	View Gene Set	1.245e-06	34	0.0001184	26	Characterization of novel SF3b and 17S U2 snRNP proteins including a human Prp5p homologue and an SF3b DEAD-box protein.	www.ncbi.nlm.ni...
PMID 15232106	View Gene Set	1.275e-06	30	0.0001184	26	Self-assembling protein microarrays.	www.ncbi.nlm.ni...
PMID 12221128	View Gene Set	1.914e-06	70	0.0001714	28	Centrosomal proteins CG-NAP and kendrin provide microtubule nucleation sites by anchoring gamma-tubulin ring complex.	www.ncbi.nlm.ni...
PMID 15146077	View Gene Set	3.268e-06	32	0.0002825	29	The human 18S U11/U12 snRNP contains a set of novel proteins not found in the U2-dependent spliceosome.	www.ncbi.nlm.ni...
PMID 15146197	View Gene Set	3.511e-06	693	0.0002911	30	Transcriptome characterization elucidates signaling networks that control human ES cell growth and differentiation.	www.ncbi.nlm.ni...
PMID 18162579	View Gene Set	3.634e-06	22	0.0002911	30	Identification of novel human Cdt1-binding proteins by a proteomics approach: proteolytic regulation by APC/CCdh1.	www.ncbi.nlm.ni...
PMID 19710015	View Gene Set	3.715e-06	48	0.0002911	30	The metastasis efficiency modifier ribosomal RNA processing 1 homolog B (RRP1B) is a chromatin-associated factor.	www.ncbi.nlm.ni...
PMID 11076968	View Gene Set	4.661e-06	62	0.0003158	33	The centrosomal protein C-Nap1 is required for cell cycle-regulated centrosome cohesion.	www.ncbi.nlm.ni...
PMID 12791985	View Gene Set	4.222e-06	37	0.0003158	33	Sensing DNA damage through ATRIP recognition of RPA-ssDNA complexes.	www.ncbi.nlm.ni...
PMID 12852856	View Gene Set	4.661e-06	61	0.0003158	33	Polo-like kinase 1 regulates Nlp a centrosome protein involved in microtubule nucleation.	www.ncbi.nlm.ni...
PMID 16462731	View Gene Set	4.661e-06	62	0.0003158	33	The PITSLRE/CDK11p58 protein kinase promotes centrosome maturation and bipolar spindle formation.	www.ncbi.nlm.ni...
PMID 7790358	View Gene Set	4.661e-06	61	0.0003158	33	Cell cycle regulation of the activity and subcellular localization of Plk1 a human protein kinase implicated in mitotic spindle function.	www.ncbi.nlm.ni...
PMID 15324660	View Gene Set	6.938e-06	242	0.0004577	38	Proteomic functional and domain-based analysis of in vivo 14-3-3 binding proteins involved in cytoskeletal regulation and cellular organization.	www.ncbi.nlm.ni...
PMID 15029244	View Gene Set	1.295e-05	57	0.0008327	39	Mammalian Cdh1/Fzr mediates its own degradation.	www.ncbi.nlm.ni...
PMID 15489336	View Gene Set	1.371e-05	722	0.0008384	40	From ORFeome to biology: a functional genomics pipeline.	www.ncbi.nlm.ni...
PMID 16381901	View Gene Set	1.354e-05	720	0.0008384	40	The LIFEdb database in 2006.	www.ncbi.nlm.ni...
PMID 19738611	View Gene Set	1.43e-05	39	0.0008537	42	Cell cycle genes and ovarian cancer susceptibility: a tagSNP analysis.	www.ncbi.nlm.ni...
PMID 12791267	View Gene Set	1.647e-05	50	0.00096	43	Prophase destruction of Emi1 by the SCF(betaTrCP/Slimb) ubiquitin ligase activates the anaphase promoting complex to allow progression beyond prometaphase.	www.ncbi.nlm.ni...
PMID 15226314	View Gene Set	1.706e-05	20	0.0009721	44	Human claspin is a ring-shaped DNA-binding protein with high affinity to branched DNA structures.	www.ncbi.nlm.ni...
PMID 12956878	View Gene Set	2.657e-05	10	0.00148	45	Roles of HLA-B HLA-C and HLA-DPA1 incompatibilities in the outcome of unrelated stem-cell transplantation.	www.ncbi.nlm.ni...
PMID 11095689	View Gene Set	2.891e-05	17	0.001575	46	The human homolog of Saccharomyces cerevisiae Mcm10 interacts with replication factors and dissociates from nuclease-resistant nuclear structures in G(2) phase.	www.ncbi.nlm.ni...
PMID 12045100	View Gene Set	3.285e-05	18	0.001735	47	DNA replication in eukaryotic cells.	www.ncbi.nlm.ni...
PMID 16713569	View Gene Set	3.321e-05	570	0.001735	47	A protein-protein interaction network for human inherited ataxias and disorders of Purkinje cell degeneration.	www.ncbi.nlm.ni...
PMID 16341674	View Gene Set	3.777e-05	392	0.001933	49	Transcriptome analysis of human gastric cancer.	www.ncbi.nlm.ni...
PMID 16130169	View Gene Set	4.193e-05	74	0.002102	50	Proteomics of human umbilical vein endothelial cells applied to etoposide-induced apoptosis.	www.ncbi.nlm.ni...
PMID 15707391	View Gene Set	4.968e-05	23	0.002442	51	DNA-dependent phosphorylation of Chk1 and Claspin in a human cell-free system.	www.ncbi.nlm.ni...
PMID 15456888	View Gene Set	5.869e-05	24	0.002829	52	The WW domain-containing proteins interact with the early spliceosome and participate in pre-mRNA splicing in vivo.	www.ncbi.nlm.ni...
PMID 12614612	View Gene Set	7.204e-05	19	0.003344	53	Interaction and assembly of murine pre-replicative complex proteins in yeast and mouse cells.	www.ncbi.nlm.ni...
PMID 20085707	View Gene Set	7.192e-05	42	0.003344	53	Aire's partners in the molecular control of immunological tolerance.	www.ncbi.nlm.ni...
PMID 10729169	View Gene Set	9.516e-05	15	0.004044	55	Efficient incorporation of HLA class II onto human immunodeficiency virus type 1 requires envelope glycoprotein packaging.	www.ncbi.nlm.ni...
PMID 3489470	View Gene Set	9.516e-05	15	0.004044	55	AIDS and related syndromes as a viral-induced autoimmune disease of the immune system: an anti-MHC II disorder. Therapeutic implications.	www.ncbi.nlm.ni...
PMID 7602119	View Gene Set	9.516e-05	15	0.004044	55	Endocytosis of endogenously synthesized HIV-1 envelope protein. Mechanism and role in processing for association with class II MHC.	www.ncbi.nlm.ni...
PMID 8376762	View Gene Set	9.516e-05	15	0.004044	55	HIV-1 envelope protein is expressed on the surface of infected cells before its processing and presentation to class II-restricted T lymphocytes.	www.ncbi.nlm.ni...
PMID 9079699	View Gene Set	9.516e-05	15	0.004044	55	The enhanced immune response to the HIV gp160/LAMP chimeric gene product targeted to the lysosome membrane protein trafficking pathway.	www.ncbi.nlm.ni...
PMID 9244350	View Gene Set	0.0001036	11	0.004329	60	BRCA1 proteins are transported to the nucleus in the absence of serum and splice variants BRCA1a BRCA1b are tyrosine phosphoproteins that associate with E2F cyclins and cyclin dependent kinases.	www.ncbi.nlm.ni...
PMID 17041588	View Gene Set	0.0001272	19	0.005227	61	CUL4-DDB1 ubiquitin ligase interacts with multiple WD40-repeat proteins and regulates histone methylation.	www.ncbi.nlm.ni...
PMID 9731529	View Gene Set	0.0001379	24	0.005574	62	Mass spectrometry and EST-database searching allows characterization of the multi-protein spliceosome complex.	www.ncbi.nlm.ni...
PMID 11230166	View Gene Set	0.0001652	748	0.006471	63	Toward a catalog of human genes and proteins: sequencing and analysis of 500 novel complete protein coding human cDNAs.	www.ncbi.nlm.ni...
PMID 20496165	View Gene Set	0.000165	68	0.006471	63	Comprehensive screen of genetic variation in DNA repair pathway genes and postmenopausal breast cancer risk.	www.ncbi.nlm.ni...
PMID 12228227	View Gene Set	0.0001872	30	0.007222	65	Docking of HIV-1 Vpr to the nuclear envelope is mediated by the interaction with the nucleoporin hCG1.	www.ncbi.nlm.ni...
PMID 10436018	View Gene Set	0.0001936	15	0.007244	66	The Cdc6 nucleotide-binding site regulates its activity in DNA replication in human cells.	www.ncbi.nlm.ni...
PMID 14697242	View Gene Set	0.0001917	15	0.007244	66	Chromosome 13q12 encoded Rho GTPase activating protein suppresses growth of breast carcinoma cells and yeast two-hybrid screen shows its interaction with several proteins.	www.ncbi.nlm.ni...
PMID 1978941	View Gene Set	0.0002299	16	0.008119	68	Identification and structural analysis of residues in the V1 region of CD4 involved in interaction with human immunodeficiency virus envelope glycoprotein gp120 and class II major histocompatibility complex molecules.	www.ncbi.nlm.ni...
PMID 2543930	View Gene Set	0.0002299	16	0.008119	68	Identification of human CD4 residues affecting class II MHC versus HIV-1 gp120 binding.	www.ncbi.nlm.ni...
PMID 2846691	View Gene Set	0.0002299	16	0.008119	68	Inhibition of CD4+ T cell function by the HIV envelope protein gp120.	www.ncbi.nlm.ni...
PMID 7776974	View Gene Set	0.0002259	18	0.008119	68	Two classes of proteins dependent on either the presence or absence of thyroid hormone for interaction with the thyroid hormone receptor.	www.ncbi.nlm.ni...
PMID 16916647	View Gene Set	0.0002409	76	0.008259	72	Substrate and functional diversity of lysine acetylation revealed by a proteomics survey.	www.ncbi.nlm.ni...
PMID 17289661	View Gene Set	0.0002423	35	0.008259	72	Molecular composition of IMP1 ribonucleoprotein granules.	www.ncbi.nlm.ni...
PMID 19237606	View Gene Set	0.0002438	84	0.008259	72	Genetic polymorphisms in 85 DNA repair genes and bladder cancer risk.	www.ncbi.nlm.ni...
PMID 18391951	View Gene Set	0.0002805	177	0.009376	75	Many sequence variants affecting diversity of adult human height.	www.ncbi.nlm.ni...
PMID 1869305	View Gene Set	0.000322	14	0.01048	76	Interaction of CD4 with HLA class II antigens and HIV gp120.	www.ncbi.nlm.ni...
PMID 7512597	View Gene Set	0.000322	14	0.01048	76	HLA class II antigens and the HIV envelope glycoprotein gp120 bind to the same face of CD4.	www.ncbi.nlm.ni...
PMID 18063578	View Gene Set	0.0003287	31	0.01056	78	The layered structure of human mitochondrial DNA nucleoids.	www.ncbi.nlm.ni...
PMID 10893419	View Gene Set	0.0003857	41	0.01125	79	Degradation of HIV-1 integrase by the N-end rule pathway.	www.ncbi.nlm.ni...
PMID 11742988	View Gene Set	0.0004305	20	0.01125	79	APC/C-mediated destruction of the centrosomal kinase Nek2A occurs in early mitosis and depends upon a cyclin A-type D-box.	www.ncbi.nlm.ni...
PMID 11984006	View Gene Set	0.0004042	27	0.01125	79	The Chediak-Higashi protein interacts with SNARE complex and signal transduction proteins.	www.ncbi.nlm.ni...
PMID 12419264	View Gene Set	0.0003857	41	0.01125	79	The RTP site shared by the HIV-1 Tat protein and the 11S regulator subunit alpha is crucial for their effects on proteasome function including antigen processing.	www.ncbi.nlm.ni...
PMID 12719574	View Gene Set	0.0004396	42	0.01125	79	Comprehensive investigation of the molecular defect in vif-deficient human immunodeficiency virus type 1 virions.	www.ncbi.nlm.ni...
PMID 12750511	View Gene Set	0.0004396	42	0.01125	79	Hypermutation of HIV-1 DNA in the absence of the Vif protein.	www.ncbi.nlm.ni...
PMID 12830140	View Gene Set	0.0004396	42	0.01125	79	DNA deamination: not just a trigger for antibody diversification but also a mechanism for defense against retroviruses.	www.ncbi.nlm.ni...
PMID 12837248	View Gene Set	0.0004331	22	0.01125	79	The chromatin-remodeling complex WINAC targets a nuclear receptor to promoters and is impaired in Williams syndrome.	www.ncbi.nlm.ni...
PMID 12840737	View Gene Set	0.0004396	42	0.01125	79	Good to CU.	www.ncbi.nlm.ni...
PMID 12859895	View Gene Set	0.0004369	47	0.01125	79	Species-specific exclusion of APOBEC3G from HIV-1 virions by Vif.	www.ncbi.nlm.ni...
PMID 12914693	View Gene Set	0.0004396	42	0.01125	79	Death by deamination: a novel host restriction system for HIV-1.	www.ncbi.nlm.ni...
PMID 12920286	View Gene Set	0.0004396	42	0.01125	79	Virology. Weapons of mutational destruction.	www.ncbi.nlm.ni...
PMID 14550573	View Gene Set	0.0003857	41	0.01125	79	Human immunodeficiency virus-1 Tat protein interacts with distinct proteasomal alpha and beta subunits.	www.ncbi.nlm.ni...
PMID 14614829	View Gene Set	0.0004396	42	0.01125	79	The Vif protein of HIV triggers degradation of the human antiretroviral DNA deaminase APOBEC3G.	www.ncbi.nlm.ni...
PMID 14667819	View Gene Set	0.0003559	112	0.01125	79	Analysis of a high-throughput yeast two-hybrid system and its use to predict the function of intracellular proteins encoded within the human MHC class III region.	www.ncbi.nlm.ni...
PMID 8662825	View Gene Set	0.0003812	10	0.01125	79	Cyclin-dependent kinases are inactivated by a combination of p21 and Thr-14/Tyr-15 phosphorylation after UV-induced DNA damage.	www.ncbi.nlm.ni...
PMID 8811196	View Gene Set	0.0003654	37	0.01125	79	Structure and functions of the 20S and 26S proteasomes.	www.ncbi.nlm.ni...
PMID 9079628	View Gene Set	0.0003857	41	0.01125	79	HIV-1 tat inhibits the 20 S proteasome and its 11 S regulator-mediated activation.	www.ncbi.nlm.ni...
PMID 9811770	View Gene Set	0.0004396	42	0.01125	79	An endogenous inhibitor of human immunodeficiency virus in human lymphocytes is overcome by the viral Vif protein.	www.ncbi.nlm.ni...
PMID 9846577	View Gene Set	0.0004396	42	0.01125	79	Evidence for a newly discovered cellular anti-HIV-1 phenotype.	www.ncbi.nlm.ni...
PMID 15502821	View Gene Set	0.0005414	12	0.01371	99	A conserved Mis12 centromere complex is linked to heterochromatic HP1 and outer kinetochore protein Zwint-1.	www.ncbi.nlm.ni...
PMID 11535616	View Gene Set	0.0005738	18	0.01424	100	Checkpoint inhibition of the APC/C in HeLa cells is mediated by a complex of BUBR1 BUB3 CDC20 and MAD2.	www.ncbi.nlm.ni...
PMID 14593737	View Gene Set	0.0005738	18	0.01424	100	The mitotic checkpoint: a signaling pathway that allows a single unattached kinetochore to inhibit mitotic exit.	www.ncbi.nlm.ni...
PMID 12171929	View Gene Set	0.0005881	31	0.01432	102	A proteomics approach to identify proliferating cell nuclear antigen (PCNA)-binding proteins in human cell lysates. Identification of the human CHL12/RFCs2-5 complex as a novel PCNA-binding protein.	www.ncbi.nlm.ni...
PMID 12539042	View Gene Set	0.0005885	45	0.01432	102	HIV-1 Tat reprograms immature dendritic cells to express chemoattractants for activated T cells and macrophages.	www.ncbi.nlm.ni...
PMID 11101529	View Gene Set	0.000601	34	0.01449	104	Functional analysis of the human CDC5L complex and identification of its components by mass spectrometry.	www.ncbi.nlm.ni...
PMID 15331610	View Gene Set	0.0006405	12	0.01529	105	The glutamine-rich region of the HIV-1 Tat protein is involved in T-cell apoptosis.	www.ncbi.nlm.ni...
PMID 16272310	View Gene Set	0.0006803	10	0.01599	106	Functional analysis of HIV type 1 Nef reveals a role for PAK2 as a regulator of cell phenotype and function in the murine dendritic cell line DC2.4.	www.ncbi.nlm.ni...
PMID 20193073	View Gene Set	0.0006826	52	0.01599	106	Chaperonin genes on the rise: new divergent classes and intense duplication in human and other vertebrate genomes.	www.ncbi.nlm.ni...
PMID 14743216	View Gene Set	0.0007289	132	0.01661	108	A physical and functional map of the human TNF-alpha/NF-kappa B signal transduction pathway.	www.ncbi.nlm.ni...
PMID 1967269	View Gene Set	0.0007285	15	0.01661	108	HIV-gp120 can block CD4-class II MHC-mediated adhesion.	www.ncbi.nlm.ni...
PMID 8168144	View Gene Set	0.0007285	15	0.01661	108	Envelope glycoproteins of HIV-1 interfere with T-cell-dependent B cell differentiation: role of CD4-MHC class II interaction in the effector phase of T cell help.	www.ncbi.nlm.ni...
PMID 10908577	View Gene Set	0.0007937	14	0.01761	111	HIV-1 rev depolymerizes microtubules to form stable bilayered rings.	www.ncbi.nlm.ni...
PMID 14965316	View Gene Set	0.0007842	12	0.01761	111	Interactions of HIV-1 proteins gp120 and Nef with cellular partners define a novel allosteric paradigm.	www.ncbi.nlm.ni...
PMID 18270339	View Gene Set	0.0007868	57	0.01761	111	Comprehensive analysis of DNA repair gene variants and risk of meningioma.	www.ncbi.nlm.ni...
PMID 12167863	View Gene Set	0.0008817	43	0.01812	114	Isolation of a human gene that inhibits HIV-1 infection and is suppressed by the viral Vif protein.	www.ncbi.nlm.ni...
PMID 12808465	View Gene Set	0.0008817	43	0.01812	114	The cytidine deaminase CEM15 induces hypermutation in newly synthesized HIV-1 DNA.	www.ncbi.nlm.ni...
PMID 12808466	View Gene Set	0.0008817	43	0.01812	114	Broad antiretroviral defence by human APOBEC3G through lethal editing of nascent reverse transcripts.	www.ncbi.nlm.ni...
PMID 12809610	View Gene Set	0.0008817	43	0.01812	114	DNA deamination mediates innate immunity to retroviral infection.	www.ncbi.nlm.ni...
PMID 12970355	View Gene Set	0.0008817	43	0.01812	114	The enzymatic activity of CEM15/Apobec-3G is essential for the regulation of the infectivity of HIV-1 virion but not a sole determinant of its antiviral activity.	www.ncbi.nlm.ni...
PMID 14527406	View Gene Set	0.0008817	43	0.01812	114	HIV-1 Vif blocks the antiviral activity of APOBEC3G by impairing both its translation and intracellular stability.	www.ncbi.nlm.ni...
PMID 14528300	View Gene Set	0.0008817	43	0.01812	114	The antiretroviral enzyme APOBEC3G is degraded by the proteasome in response to HIV-1 Vif.	www.ncbi.nlm.ni...
PMID 14528301	View Gene Set	0.0008817	43	0.01812	114	HIV-1 Vif protein binds the editing enzyme APOBEC3G and induces its degradation.	www.ncbi.nlm.ni...
PMID 14557625	View Gene Set	0.0008817	43	0.01812	114	The human immunodeficiency virus type 1 Vif protein reduces intracellular expression and inhibits packaging of APOBEC3G (CEM15) a cellular inhibitor of virus infectivity.	www.ncbi.nlm.ni...
PMID 16501559	View Gene Set	0.0009112	12	0.01857	123	Analysis of the human protein interactome and comparison with yeast worm and fly interaction datasets.	www.ncbi.nlm.ni...
PMID 16484223	View Gene Set	0.0009253	16	0.01871	124	FEZ1 dimerization and interaction with transcription regulatory proteins involves its coiled-coil region.	www.ncbi.nlm.ni...
PMID 17081065	View Gene Set	0.0009687	80	0.01943	125	Proteomic and bioinformatic characterization of the biogenesis and function of melanosomes.	www.ncbi.nlm.ni...
PMID 15009096	View Gene Set	0.001007	39	0.02004	126	Proteomics analysis of the centromere complex from HeLa interphase cells: UV-damaged DNA binding protein 1 (DDB-1) is a component of the CEN-complex while BMI-1 is transiently co-localized with the centromeric region in interphase.	www.ncbi.nlm.ni...
PMID 17220478	View Gene Set	0.001053	63	0.02079	127	Proteomics analysis of the interactome of N-myc downstream regulated gene 1 and its interactions with the androgen response program in prostate cancer cells.	www.ncbi.nlm.ni...
PMID 12665801	View Gene Set	0.001112	261	0.02177	128	Exploring proteomes and analyzing protein processing by mass spectrometric identification of sorted N-terminal peptides.	www.ncbi.nlm.ni...
PMID 12706105	View Gene Set	0.001124	182	0.02185	129	Identification and characterization of over 100 mitochondrial ribosomal protein pseudogenes in the human genome.	www.ncbi.nlm.ni...
PMID 11310559	View Gene Set	0.001189	17	0.02293	130	Identification of nuclear-import and cell-cycle regulatory proteins that bind to prothymosin alpha.	www.ncbi.nlm.ni...
PMID 19161160	View Gene Set	0.001226	49	0.02347	131	An association study of 45 folate-related genes in spina bifida: Involvement of cubilin (CUBN) and tRNA aspartic acid methyltransferase 1 (TRDMT1).	www.ncbi.nlm.ni...
PMID 12486001	View Gene Set	0.001386	15	0.02574	132	HIV-1 Tat targets microtubules to induce apoptosis a process promoted by the pro-apoptotic Bcl-2 relative Bim.	www.ncbi.nlm.ni...
PMID 12930902	View Gene Set	0.001385	11	0.02574	132	The alternative Ctf18-Dcc1-Ctf8-replication factor C complex required for sister chromatid cohesion loads proliferating cell nuclear antigen onto DNA.	www.ncbi.nlm.ni...
PMID 9190208	View Gene Set	0.001369	10	0.02574	132	Cyclin D1/Cdk4 regulates retinoblastoma protein-mediated cell cycle arrest by site-specific phosphorylation.	www.ncbi.nlm.ni...
PMID 9472028	View Gene Set	0.001372	12	0.02574	132	SRPK2: a differentially expressed SR protein-specific kinase involved in mediating the interaction and localization of pre-mRNA splicing factors in mammalian cells.	www.ncbi.nlm.ni...
PMID 15383276	View Gene Set	0.001415	67	0.02608	136	A protein interaction network links GIT1 an enhancer of huntingtin aggregation to Huntington's disease.	www.ncbi.nlm.ni...
PMID 9111189	View Gene Set	0.001453	16	0.02659	137	Which DNA polymerases are used for DNA-repair in eukaryotes?	www.ncbi.nlm.ni...
PMID 11076863	View Gene Set	0.00148	794	0.02689	138	DNA cloning using in vitro site-specific recombination.	www.ncbi.nlm.ni...
PMID 9150948	View Gene Set	0.001499	15	0.02704	139	A two-dimensional gel database of human colon carcinoma proteins.	www.ncbi.nlm.ni...
PMID 16319397	View Gene Set	0.001562	20	0.02797	140	Characterization of histone H2A and H2B variants and their post-translational modifications by mass spectrometry.	www.ncbi.nlm.ni...
PMID 16303743	View Gene Set	0.001585	427	0.02819	141	Signal sequence and keyword trap in silico for selection of full-length human cDNAs encoding secretion or membrane proteins from oligo-capped cDNA libraries.	www.ncbi.nlm.ni...
PMID 12481031	View Gene Set	0.001602	21	0.02829	142	CUL7: A DOC domain-containing cullin selectively binds Skp1.Fbx29 to form an SCF-like complex.	www.ncbi.nlm.ni...
PMID 14499622	View Gene Set	0.001645	53	0.0288	143	Yeast two-hybrid screens imply involvement of Fanconi anemia proteins in transcription regulation cell signaling oxidative metabolism and cellular transport.	www.ncbi.nlm.ni...
PMID 17363900	View Gene Set	0.001654	14	0.0288	143	The human Nup107-160 nuclear pore subcomplex contributes to proper kinetochore functions.	www.ncbi.nlm.ni...
PMID 11125146	View Gene Set	0.001743	10	0.02999	145	Inhibition of eukaryotic DNA replication by geminin binding to Cdt1.	www.ncbi.nlm.ni...
PMID 16043481	View Gene Set	0.001747	11	0.02999	145	RPGR-ORF15 which is mutated in retinitis pigmentosa associates with SMC1 SMC3 and microtubule transport proteins.	www.ncbi.nlm.ni...
PMID 10931946	View Gene Set	0.00177	118	0.03019	147	Gene expression profiling in the human hypothalamus-pituitary-adrenal axis and full-length cDNA cloning.	www.ncbi.nlm.ni...
PMID 12620389	View Gene Set	0.001959	23	0.03318	148	Novel raf kinase protein-protein interactions found by an exhaustive yeast two-hybrid analysis.	www.ncbi.nlm.ni...
PMID 11713266	View Gene Set	0.002024	12	0.03406	149	The methylosome a 20S complex containing JBP1 and pICln produces dimethylarginine-modified Sm proteins.	www.ncbi.nlm.ni...
PMID 12639940	View Gene Set	0.002113	18	0.03503	150	Rab8B GTPase and junction dynamics in the testis.	www.ncbi.nlm.ni...
PMID 15691386	View Gene Set	0.002124	12	0.03503	150	HIV-1 Tat protein enhances microtubule polymerization.	www.ncbi.nlm.ni...
PMID 15698476	View Gene Set	0.002124	12	0.03503	150	HIV-1 Tat apoptosis and the mitochondria: a tubulin link?	www.ncbi.nlm.ni...
PMID 10725331	View Gene Set	0.002331	14	0.0382	153	Gemin4. A novel component of the SMN complex that is found in both gems and nucleoli.	www.ncbi.nlm.ni...
PMID 19571811	View Gene Set	0.002517	15	0.04098	154	Common polygenic variation contributes to risk of schizophrenia and bipolar disorder.	www.ncbi.nlm.ni...
PMID 12609982	View Gene Set	0.0026	11	0.04178	155	TIP120A associates with cullins and modulates ubiquitin ligase activity.	www.ncbi.nlm.ni...
PMID 1286669	View Gene Set	0.002584	28	0.04178	155	Human liver protein map: a reference database established by microsequencing and gel comparison.	www.ncbi.nlm.ni...
PMID 20056645	View Gene Set	0.002711	32	0.04329	157	Association of mitotic regulation pathway polymorphisms with pancreatic cancer risk and outcome.	www.ncbi.nlm.ni...
PMID 11714716	View Gene Set	0.00277	13	0.04395	158	Gemin5 a novel WD repeat protein component of the SMN complex that binds Sm proteins.	www.ncbi.nlm.ni...
PMID 16697956	View Gene Set	0.002855	13	0.04502	159	Mitochondria primed by death signals determine cellular addiction to antiapoptotic BCL-2 family members.	www.ncbi.nlm.ni...
PMID 18715871	View Gene Set	0.002922	20	0.04578	160	PP4R4/KIAA1622 forms a novel stable cytosolic complex with phosphoprotein phosphatase 4.	www.ncbi.nlm.ni...
PMID 11463741	View Gene Set	0.003043	25	0.04709	161	Structure--function relationships in HIV-1 Nef.	www.ncbi.nlm.ni...
PMID 14564014	View Gene Set	0.003038	47	0.04709	161	Induction of APOBEC3G ubiquitination and degradation by an HIV-1 Vif-Cul5-SCF complex.	www.ncbi.nlm.ni...
PMID 12070128	View Gene Set	0.003245	17	0.04991	163	Human securin proteolysis is controlled by the spindle checkpoint and reveals when the APC/C switches from activation by Cdc20 to Cdh1.	www.ncbi.nlm.ni...

Gene Set Collection: ChromosomalTiles5Mb

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: Prosite

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: ppi.BIND

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: ppi.BioGRID

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: ppi.HPRD

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: ppi.anyDB

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: pathwayCommons.cell-map

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: pathwayCommons.nci-nature

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: pathwayCommons.reactome

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null chr6_147.5-152.5Mb	View Gene Set	4.082e-05	21	0.04548	1	Genomic tile: chr6 ; 147500001-152500001 Mb	genome.ucsc.edu...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null PS50102	View Gene Set	5.501e-09	229	4.044e-06	1	RRM	expasy.org/pros...
Null PS00678	View Gene Set	7.601e-07	168	0.0001862	2	WD_REPEATS_1	expasy.org/pros...
Null PS50294	View Gene Set	5.361e-07	245	0.0001862	2	WD_REPEATS_REGION	expasy.org/pros...
Null PS50082	View Gene Set	2.417e-06	233	0.0004442	4	WD_REPEATS_2	expasy.org/pros...
Null PS00750	View Gene Set	0.0002497	9	0.02621	5	TCP1_1	expasy.org/pros...
Null PS00751	View Gene Set	0.0002497	9	0.02621	5	TCP1_2	expasy.org/pros...
Null PS00995	View Gene Set	0.0002497	9	0.02621	5	TCP1_3	expasy.org/pros...
Null PS00674	View Gene Set	0.0003242	29	0.02978	8	AAA	expasy.org/pros...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null ppi.CDKN1A	View Gene Set	0.0001489	9	0.01407	1	Protein-protein-interaction for CDKN1A	www.ncbi.nlm.ni...
Null ppi.RB1	View Gene Set	0.0001101	44	0.01407	1	Protein-protein-interaction for RB1	www.ncbi.nlm.ni...
Null ppi.CBX5	View Gene Set	0.0007765	7	0.03669	3	Protein-protein-interaction for CBX5	www.ncbi.nlm.ni...
Null ppi.STARD13	View Gene Set	0.000646	10	0.03669	3	Protein-protein-interaction for STARD13	www.ncbi.nlm.ni...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null ppi.155871	View Gene Set	1.735e-12	236	3.986e-09	1	Protein-protein-interaction for 155871	www.ncbi.nlm.ni...
Null ppi.MEPCE	View Gene Set	1.503e-10	147	1.727e-07	2	Protein-protein-interaction for MEPCE	www.ncbi.nlm.ni...
Null ppi.SRRM2	View Gene Set	1.584e-08	101	1.213e-05	3	Protein-protein-interaction for SRRM2	www.ncbi.nlm.ni...
Null ppi.GABARAPL2	View Gene Set	3.156e-06	28	0.001812	4	Protein-protein-interaction for GABARAPL2	www.ncbi.nlm.ni...
Null ppi.RFWD2	View Gene Set	4.874e-06	26	0.002239	5	Protein-protein-interaction for RFWD2	www.ncbi.nlm.ni...
Null ppi.CDT1	View Gene Set	6.351e-06	37	0.002431	6	Protein-protein-interaction for CDT1	www.ncbi.nlm.ni...
Null ppi.UBA5	View Gene Set	8.384e-06	35	0.002751	7	Protein-protein-interaction for UBA5	www.ncbi.nlm.ni...
Null ppi.SUMO2	View Gene Set	1.047e-05	50	0.003007	8	Protein-protein-interaction for SUMO2	www.ncbi.nlm.ni...
Null ppi.72462	View Gene Set	2.007e-05	42	0.005122	9	Protein-protein-interaction for 72462	www.ncbi.nlm.ni...
Null ppi.DDA1	View Gene Set	3.948e-05	44	0.009068	10	Protein-protein-interaction for DDA1	www.ncbi.nlm.ni...
Null ppi.UCHL5	View Gene Set	8.091e-05	33	0.0169	11	Protein-protein-interaction for UCHL5	www.ncbi.nlm.ni...
Null ppi.RNPS1	View Gene Set	0.000101	38	0.01785	12	Protein-protein-interaction for RNPS1	www.ncbi.nlm.ni...
Null ppi.NIF3L1	View Gene Set	9.783e-05	25	0.01785	12	Protein-protein-interaction for NIF3L1	www.ncbi.nlm.ni...
Null ppi.BRCC3	View Gene Set	0.0001156	22	0.01896	14	Protein-protein-interaction for BRCC3	www.ncbi.nlm.ni...
Null ppi.USP39	View Gene Set	0.0001715	15	0.02299	15	Protein-protein-interaction for USP39	www.ncbi.nlm.ni...
Null ppi.GPN1	View Gene Set	0.0001853	27	0.02299	15	Protein-protein-interaction for GPN1	www.ncbi.nlm.ni...
Null ppi.SKP2	View Gene Set	0.0001712	24	0.02299	15	Protein-protein-interaction for SKP2	www.ncbi.nlm.ni...
Null ppi.RPAP2	View Gene Set	0.0001826	43	0.02299	15	Protein-protein-interaction for RPAP2	www.ncbi.nlm.ni...
Null ppi.USP14	View Gene Set	0.0001902	22	0.02299	15	Protein-protein-interaction for USP14	www.ncbi.nlm.ni...
Null ppi.PCNA	View Gene Set	0.0002252	40	0.02587	20	Protein-protein-interaction for PCNA	www.ncbi.nlm.ni...
Null ppi.ORC3L	View Gene Set	0.0002483	9	0.02592	21	Protein-protein-interaction for ORC3L	www.ncbi.nlm.ni...
Null ppi.USP50	View Gene Set	0.0002426	22	0.02592	21	Protein-protein-interaction for USP50	www.ncbi.nlm.ni...
Null ppi.ORC2L	View Gene Set	0.0002648	12	0.02644	23	Protein-protein-interaction for ORC2L	www.ncbi.nlm.ni...
Null ppi.WBP4	View Gene Set	0.0003042	35	0.02911	24	Protein-protein-interaction for WBP4	www.ncbi.nlm.ni...
Null ppi.SRRM1	View Gene Set	0.00043	64	0.03095	25	Protein-protein-interaction for SRRM1	www.ncbi.nlm.ni...
Null ppi.RUVBL2	View Gene Set	0.0005242	64	0.03095	25	Protein-protein-interaction for RUVBL2	www.ncbi.nlm.ni...
Null ppi.RRP1B	View Gene Set	0.0004511	21	0.03095	25	Protein-protein-interaction for RRP1B	www.ncbi.nlm.ni...
Null ppi.CBX5	View Gene Set	0.0004033	38	0.03095	25	Protein-protein-interaction for CBX5	www.ncbi.nlm.ni...
Null ppi.RPAP1	View Gene Set	0.0004464	24	0.03095	25	Protein-protein-interaction for RPAP1	www.ncbi.nlm.ni...
Null ppi.GIGYF2	View Gene Set	0.0005042	17	0.03095	25	Protein-protein-interaction for GIGYF2	www.ncbi.nlm.ni...
Null ppi.RNU12-2P	View Gene Set	0.0004913	18	0.03095	25	Protein-protein-interaction for RNU12-2P	www.ncbi.nlm.ni...
Null ppi.RNU11	View Gene Set	0.0004913	18	0.03095	25	Protein-protein-interaction for RNU11	www.ncbi.nlm.ni...
Null ppi.MGMT	View Gene Set	0.0005096	28	0.03095	25	Protein-protein-interaction for MGMT	www.ncbi.nlm.ni...
Null ppi.CHFR	View Gene Set	0.0005255	18	0.03095	25	Protein-protein-interaction for CHFR	www.ncbi.nlm.ni...
Null ppi.TP53	View Gene Set	0.0004322	168	0.03095	25	Protein-protein-interaction for TP53	www.ncbi.nlm.ni...
Null ppi.TRAF6	View Gene Set	0.0004549	47	0.03095	25	Protein-protein-interaction for TRAF6	www.ncbi.nlm.ni...
Null ppi.MIS12	View Gene Set	0.0004675	9	0.03095	25	Protein-protein-interaction for MIS12	www.ncbi.nlm.ni...
Null ppi.RPAP3	View Gene Set	0.0004119	29	0.03095	25	Protein-protein-interaction for RPAP3	www.ncbi.nlm.ni...
Null ppi.PSMD6	View Gene Set	0.0004057	21	0.03095	25	Protein-protein-interaction for PSMD6	www.ncbi.nlm.ni...
Null ppi.CREBBP	View Gene Set	0.0005432	22	0.03119	40	Protein-protein-interaction for CREBBP	www.ncbi.nlm.ni...
Null ppi.FOXM1	View Gene Set	0.0005781	8	0.03239	41	Protein-protein-interaction for FOXM1	www.ncbi.nlm.ni...
Null ppi.TOM1L1	View Gene Set	0.0006579	7	0.03556	42	Protein-protein-interaction for TOM1L1	www.ncbi.nlm.ni...
Null ppi.RAB1A	View Gene Set	0.0006658	8	0.03556	42	Protein-protein-interaction for RAB1A	www.ncbi.nlm.ni...
Null ppi.GABARAPL1	View Gene Set	0.0006817	27	0.03559	44	Protein-protein-interaction for GABARAPL1	www.ncbi.nlm.ni...
Null ppi.SQSTM1	View Gene Set	0.0007611	22	0.03885	45	Protein-protein-interaction for SQSTM1	www.ncbi.nlm.ni...
Null ppi.CSNK2A1	View Gene Set	0.0008435	12	0.04037	46	Protein-protein-interaction for CSNK2A1	www.ncbi.nlm.ni...
Null ppi.RAD18	View Gene Set	0.000824	14	0.04037	46	Protein-protein-interaction for RAD18	www.ncbi.nlm.ni...
Null ppi.RBL1	View Gene Set	0.0008397	24	0.04037	46	Protein-protein-interaction for RBL1	www.ncbi.nlm.ni...
Null ppi.GOLM1	View Gene Set	0.000921	10	0.04258	49	Protein-protein-interaction for GOLM1	www.ncbi.nlm.ni...
Null ppi.TERF2	View Gene Set	0.0009269	9	0.04258	49	Protein-protein-interaction for TERF2	www.ncbi.nlm.ni...
Null ppi.STRA13	View Gene Set	0.0009468	7	0.04264	51	Protein-protein-interaction for STRA13	www.ncbi.nlm.ni...
Null ppi.NUP54	View Gene Set	0.001054	9	0.04599	52	Protein-protein-interaction for NUP54	www.ncbi.nlm.ni...
Null ppi.AURKB	View Gene Set	0.001061	9	0.04599	52	Protein-protein-interaction for AURKB	www.ncbi.nlm.ni...
Null ppi.FYCO1	View Gene Set	0.001104	16	0.04694	54	Protein-protein-interaction for FYCO1	www.ncbi.nlm.ni...
Null ppi.TCERG1	View Gene Set	0.001146	35	0.04699	55	Protein-protein-interaction for TCERG1	www.ncbi.nlm.ni...
Null ppi.C1orf103	View Gene Set	0.001144	95	0.04699	55	Protein-protein-interaction for C1orf103	www.ncbi.nlm.ni...
Null ppi.BRE	View Gene Set	0.001191	16	0.04799	57	Protein-protein-interaction for BRE	www.ncbi.nlm.ni...
Null ppi.PIAS1	View Gene Set	0.001228	25	0.04864	58	Protein-protein-interaction for PIAS1	www.ncbi.nlm.ni...
Null ppi.VIM	View Gene Set	0.001263	36	0.04916	59	Protein-protein-interaction for VIM	www.ncbi.nlm.ni...
Null ppi.PUF60	View Gene Set	0.001397	31	0.04937	60	Protein-protein-interaction for PUF60	www.ncbi.nlm.ni...
Null ppi.NUP98	View Gene Set	0.001342	10	0.04937	60	Protein-protein-interaction for NUP98	www.ncbi.nlm.ni...
Null ppi.DTL	View Gene Set	0.001337	7	0.04937	60	Protein-protein-interaction for DTL	www.ncbi.nlm.ni...
Null ppi.RPA1	View Gene Set	0.001354	23	0.04937	60	Protein-protein-interaction for RPA1	www.ncbi.nlm.ni...
Null ppi.AURKA	View Gene Set	0.001304	9	0.04937	60	Protein-protein-interaction for AURKA	www.ncbi.nlm.ni...
Null ppi.PAAF1	View Gene Set	0.001377	20	0.04937	60	Protein-protein-interaction for PAAF1	www.ncbi.nlm.ni...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null ppi.SUMO4	View Gene Set	1.395e-08	76	3.313e-05	1	Protein-protein-interaction for SUMO4	www.ncbi.nlm.ni...
Null ppi.SFRS12	View Gene Set	4.932e-07	49	0.0005854	2	Protein-protein-interaction for SFRS12	www.ncbi.nlm.ni...
Null ppi.ORC3L	View Gene Set	3.266e-05	13	0.0155	3	Protein-protein-interaction for ORC3L	www.ncbi.nlm.ni...
Null ppi.PCNA	View Gene Set	2.802e-05	33	0.0155	3	Protein-protein-interaction for PCNA	www.ncbi.nlm.ni...
Null ppi.NIF3L1	View Gene Set	2.596e-05	27	0.0155	3	Protein-protein-interaction for NIF3L1	www.ncbi.nlm.ni...
Null ppi.MCM10	View Gene Set	5.651e-05	25	0.02236	6	Protein-protein-interaction for MCM10	www.ncbi.nlm.ni...
Null ppi.GEMIN4	View Gene Set	0.00012	15	0.04071	7	Protein-protein-interaction for GEMIN4	www.ncbi.nlm.ni...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null ppi.155871	View Gene Set	1.113e-13	251	4.001e-10	1	Protein-protein-interaction for 155871	www.ncbi.nlm.ni...
Null ppi.MEPCE	View Gene Set	1.503e-10	147	2.701e-07	2	Protein-protein-interaction for MEPCE	www.ncbi.nlm.ni...
Null ppi.SRRM2	View Gene Set	1.584e-08	101	1.423e-05	3	Protein-protein-interaction for SRRM2	www.ncbi.nlm.ni...
Null ppi.SUMO4	View Gene Set	1.395e-08	76	1.423e-05	3	Protein-protein-interaction for SUMO4	www.ncbi.nlm.ni...
Null ppi.SFRS12	View Gene Set	3.21e-07	50	0.0002307	5	Protein-protein-interaction for SFRS12	www.ncbi.nlm.ni...
Null ppi.GABARAPL2	View Gene Set	1.667e-06	31	0.0009984	6	Protein-protein-interaction for GABARAPL2	www.ncbi.nlm.ni...
Null ppi.ORC3L	View Gene Set	3.591e-06	16	0.001613	7	Protein-protein-interaction for ORC3L	www.ncbi.nlm.ni...
Null ppi.CDT1	View Gene Set	3.412e-06	42	0.001613	7	Protein-protein-interaction for CDT1	www.ncbi.nlm.ni...
Null ppi.RFWD2	View Gene Set	4.874e-06	26	0.001947	9	Protein-protein-interaction for RFWD2	www.ncbi.nlm.ni...
Null ppi.UBA5	View Gene Set	8.384e-06	35	0.003013	10	Protein-protein-interaction for UBA5	www.ncbi.nlm.ni...
Null ppi.72462	View Gene Set	2.007e-05	42	0.006557	11	Protein-protein-interaction for 72462	www.ncbi.nlm.ni...
Null ppi.NIF3L1	View Gene Set	2.596e-05	27	0.007775	12	Protein-protein-interaction for NIF3L1	www.ncbi.nlm.ni...
Null ppi.PCNA	View Gene Set	3.258e-05	47	0.008365	13	Protein-protein-interaction for PCNA	www.ncbi.nlm.ni...
Null ppi.SUMO2	View Gene Set	3.166e-05	55	0.008365	13	Protein-protein-interaction for SUMO2	www.ncbi.nlm.ni...
Null ppi.DDA1	View Gene Set	3.948e-05	44	0.009459	15	Protein-protein-interaction for DDA1	www.ncbi.nlm.ni...
Null ppi.RBL1	View Gene Set	6.874e-05	31	0.01544	16	Protein-protein-interaction for RBL1	www.ncbi.nlm.ni...
Null ppi.RNPS1	View Gene Set	7.821e-05	44	0.01653	17	Protein-protein-interaction for RNPS1	www.ncbi.nlm.ni...
Null ppi.MCM10	View Gene Set	0.0001	28	0.01997	18	Protein-protein-interaction for MCM10	www.ncbi.nlm.ni...
Null ppi.BRCC3	View Gene Set	0.0001156	22	0.02077	19	Protein-protein-interaction for BRCC3	www.ncbi.nlm.ni...
Null ppi.STARD13	View Gene Set	0.0001147	15	0.02077	19	Protein-protein-interaction for STARD13	www.ncbi.nlm.ni...
Null ppi.RUVBL2	View Gene Set	0.0001427	72	0.02442	21	Protein-protein-interaction for RUVBL2	www.ncbi.nlm.ni...
Null ppi.USP39	View Gene Set	0.0001761	16	0.02454	22	Protein-protein-interaction for USP39	www.ncbi.nlm.ni...
Null ppi.GPN1	View Gene Set	0.0001853	27	0.02454	22	Protein-protein-interaction for GPN1	www.ncbi.nlm.ni...
Null ppi.KPNA6	View Gene Set	0.0001912	12	0.02454	22	Protein-protein-interaction for KPNA6	www.ncbi.nlm.ni...
Null ppi.XPO1	View Gene Set	0.0001637	43	0.02454	22	Protein-protein-interaction for XPO1	www.ncbi.nlm.ni...
Null ppi.RPAP2	View Gene Set	0.0001826	43	0.02454	22	Protein-protein-interaction for RPAP2	www.ncbi.nlm.ni...
Null ppi.USP14	View Gene Set	0.0001902	22	0.02454	22	Protein-protein-interaction for USP14	www.ncbi.nlm.ni...
Null ppi.CDC20	View Gene Set	0.0001817	5	0.02454	22	Protein-protein-interaction for CDC20	www.ncbi.nlm.ni...
Null ppi.FOXM1	View Gene Set	0.0002545	9	0.0269	29	Protein-protein-interaction for FOXM1	www.ncbi.nlm.ni...
Null ppi.GABARAPL1	View Gene Set	0.0002274	29	0.0269	29	Protein-protein-interaction for GABARAPL1	www.ncbi.nlm.ni...
Null ppi.GIGYF2	View Gene Set	0.0002492	19	0.0269	29	Protein-protein-interaction for GIGYF2	www.ncbi.nlm.ni...
Null ppi.USP50	View Gene Set	0.0002426	22	0.0269	29	Protein-protein-interaction for USP50	www.ncbi.nlm.ni...
Null ppi.NUP98	View Gene Set	0.0002369	12	0.0269	29	Protein-protein-interaction for NUP98	www.ncbi.nlm.ni...
Null ppi.RBL2	View Gene Set	0.0002463	30	0.0269	29	Protein-protein-interaction for RBL2	www.ncbi.nlm.ni...
Null ppi.WBP4	View Gene Set	0.0003042	35	0.03048	35	Protein-protein-interaction for WBP4	www.ncbi.nlm.ni...
Null ppi.UCHL5	View Gene Set	0.0003053	34	0.03048	35	Protein-protein-interaction for UCHL5	www.ncbi.nlm.ni...
Null ppi.FZR1	View Gene Set	0.00032	15	0.03073	37	Protein-protein-interaction for FZR1	www.ncbi.nlm.ni...
Null ppi.SIP1	View Gene Set	0.0003249	17	0.03073	37	Protein-protein-interaction for SIP1	www.ncbi.nlm.ni...
Null ppi.SRRM1	View Gene Set	0.0003554	66	0.03268	39	Protein-protein-interaction for SRRM1	www.ncbi.nlm.ni...
Null ppi.PRPF40A	View Gene Set	0.0003637	96	0.03268	39	Protein-protein-interaction for PRPF40A	www.ncbi.nlm.ni...
Null ppi.CBX5	View Gene Set	0.0003734	46	0.03274	41	Protein-protein-interaction for CBX5	www.ncbi.nlm.ni...
Null ppi.TOM1L1	View Gene Set	0.0004981	11	0.03435	42	Protein-protein-interaction for TOM1L1	www.ncbi.nlm.ni...
Null ppi.STRA13	View Gene Set	0.0004732	9	0.03435	42	Protein-protein-interaction for STRA13	www.ncbi.nlm.ni...
Null ppi.RRP1B	View Gene Set	0.0004511	21	0.03435	42	Protein-protein-interaction for RRP1B	www.ncbi.nlm.ni...
Null ppi.RPAP1	View Gene Set	0.0004464	24	0.03435	42	Protein-protein-interaction for RPAP1	www.ncbi.nlm.ni...
Null ppi.RNU12-2P	View Gene Set	0.0004913	18	0.03435	42	Protein-protein-interaction for RNU12-2P	www.ncbi.nlm.ni...
Null ppi.RNU11	View Gene Set	0.0004913	18	0.03435	42	Protein-protein-interaction for RNU11	www.ncbi.nlm.ni...
Null ppi.MGMT	View Gene Set	0.0005096	28	0.03435	42	Protein-protein-interaction for MGMT	www.ncbi.nlm.ni...
Null ppi.ORC2L	View Gene Set	0.0005161	15	0.03435	42	Protein-protein-interaction for ORC2L	www.ncbi.nlm.ni...
Null ppi.LSM2	View Gene Set	0.000497	26	0.03435	42	Protein-protein-interaction for LSM2	www.ncbi.nlm.ni...
Null ppi.MIS12	View Gene Set	0.0004675	9	0.03435	42	Protein-protein-interaction for MIS12	www.ncbi.nlm.ni...
Null ppi.MAGED1	View Gene Set	0.0005146	18	0.03435	42	Protein-protein-interaction for MAGED1	www.ncbi.nlm.ni...
Null ppi.CDK1	View Gene Set	0.0005012	16	0.03435	42	Protein-protein-interaction for CDK1	www.ncbi.nlm.ni...
Null ppi.PSMD6	View Gene Set	0.0004656	23	0.03435	42	Protein-protein-interaction for PSMD6	www.ncbi.nlm.ni...
Null ppi.RPAP3	View Gene Set	0.000543	30	0.03548	55	Protein-protein-interaction for RPAP3	www.ncbi.nlm.ni...
Null ppi.NDC80	View Gene Set	0.0005988	10	0.03843	56	Protein-protein-interaction for NDC80	www.ncbi.nlm.ni...
Null ppi.TSPAN4	View Gene Set	0.0006115	8	0.03856	57	Protein-protein-interaction for TSPAN4	www.ncbi.nlm.ni...
Null ppi.TXN	View Gene Set	0.0006706	12	0.04156	58	Protein-protein-interaction for TXN	www.ncbi.nlm.ni...
Null ppi.ORC6L	View Gene Set	0.0007285	15	0.04438	59	Protein-protein-interaction for ORC6L	www.ncbi.nlm.ni...
Null ppi.TCERG1	View Gene Set	0.0007621	39	0.0449	60	Protein-protein-interaction for TCERG1	www.ncbi.nlm.ni...
Null ppi.TP53	View Gene Set	0.0007502	220	0.0449	60	Protein-protein-interaction for TP53	www.ncbi.nlm.ni...
Null ppi.KIF4A	View Gene Set	0.0008171	7	0.04701	62	Protein-protein-interaction for KIF4A	www.ncbi.nlm.ni...
Null ppi.RAD18	View Gene Set	0.000824	14	0.04701	62	Protein-protein-interaction for RAD18	www.ncbi.nlm.ni...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null TNF alpha/NF-kB	View Gene Set	4.549e-05	170	0.0004549	1	CELL_MAP - TNF alpha/NF-kB gene set	www.pathwaycomm...
Null AndrogenReceptor	View Gene Set	0.0006088	78	0.003044	2	CELL_MAP - AndrogenReceptor gene set	www.pathwaycomm...
Null TGFBR	View Gene Set	0.00722	124	0.02407	3	CELL_MAP - TGFBR gene set	www.pathwaycomm...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null C-MYC pathway	View Gene Set	5.84e-10	149	1.086e-07	1	NCI_NATURE - C-MYC pathway gene set	www.pathwaycomm...
Null Validated targets of C-MYC transcriptional activation	View Gene Set	6.195e-09	80	5.762e-07	2	NCI_NATURE - Validated targets of C-MYC transcriptional activation gene set	www.pathwaycomm...
Null Polo-like kinase signaling events in the cell cycle	View Gene Set	2.1e-07	109	1.302e-05	3	NCI_NATURE - Polo-like kinase signaling events in the cell cycle gene set	www.pathwaycomm...
Null Aurora B signaling	View Gene Set	9.677e-07	41	3.6e-05	4	NCI_NATURE - Aurora B signaling gene set	www.pathwaycomm...
Null Direct p53 effectors	View Gene Set	8.479e-07	139	3.6e-05	4	NCI_NATURE - Direct p53 effectors gene set	www.pathwaycomm...
Null PLK1 signaling events	View Gene Set	1.37e-06	104	4.247e-05	6	NCI_NATURE - PLK1 signaling events gene set	www.pathwaycomm...
Null p53 pathway	View Gene Set	5.622e-06	190	0.0001494	7	NCI_NATURE - p53 pathway gene set	www.pathwaycomm...
Null Signaling by Aurora kinases	View Gene Set	1.343e-05	98	0.0003123	8	NCI_NATURE - Signaling by Aurora kinases gene set	www.pathwaycomm...
Null FOXM1 transcription factor network	View Gene Set	1.601e-05	42	0.0003308	9	NCI_NATURE - FOXM1 transcription factor network gene set	www.pathwaycomm...
Null E2F transcription factor network	View Gene Set	0.0004442	73	0.008263	10	NCI_NATURE - E2F transcription factor network gene set	www.pathwaycomm...
Null ErbB1 downstream signaling	View Gene Set	0.0008288	812	0.01132	11	NCI_NATURE - ErbB1 downstream signaling gene set	www.pathwaycomm...
Null EGF receptor (ErbB1) signaling pathway	View Gene Set	0.0008288	812	0.01132	11	NCI_NATURE - EGF receptor (ErbB1) signaling pathway gene set	www.pathwaycomm...
Null Internalization of ErbB1	View Gene Set	0.0008288	812	0.01132	11	NCI_NATURE - Internalization of ErbB1 gene set	www.pathwaycomm...
Null ErbB receptor signaling network	View Gene Set	0.000852	841	0.01132	11	NCI_NATURE - ErbB receptor signaling network gene set	www.pathwaycomm...
Null Proteogylcan syndecan-mediated signaling events	View Gene Set	0.001173	875	0.01455	15	NCI_NATURE - Proteogylcan syndecan-mediated signaling events gene set	www.pathwaycomm...
Null Regulation of Androgen receptor activity	View Gene Set	0.001295	108	0.01505	16	NCI_NATURE - Regulation of Androgen receptor activity gene set	www.pathwaycomm...
Null Glypican pathway	View Gene Set	0.001419	937	0.01553	17	NCI_NATURE - Glypican pathway gene set	www.pathwaycomm...
Null BARD1 signaling events	View Gene Set	0.001604	29	0.01658	18	NCI_NATURE - BARD1 signaling events gene set	www.pathwaycomm...
Null Validated targets of C-MYC transcriptional repression	View Gene Set	0.002222	64	0.02067	19	NCI_NATURE - Validated targets of C-MYC transcriptional repression gene set	www.pathwaycomm...
Null Androgen-mediated signaling	View Gene Set	0.00218	130	0.02067	19	NCI_NATURE - Androgen-mediated signaling gene set	www.pathwaycomm...
Null Canonical Wnt signaling pathway	View Gene Set	0.002423	156	0.02146	21	NCI_NATURE - Canonical Wnt signaling pathway gene set	www.pathwaycomm...
Null Regulation of Wnt-mediated beta catenin signaling and target gene transcription	View Gene Set	0.003615	135	0.03056	22	NCI_NATURE - Regulation of Wnt-mediated beta catenin signaling and target gene transcription gene set	www.pathwaycomm...
Null Class I PI3K signaling events mediated by Akt	View Gene Set	0.003897	532	0.03151	23	NCI_NATURE - Class I PI3K signaling events mediated by Akt gene set	www.pathwaycomm...
Null Signaling events mediated by Hepatocyte Growth Factor Receptor (c-Met)	View Gene Set	0.005434	677	0.03744	24	NCI_NATURE - Signaling events mediated by Hepatocyte Growth Factor Receptor (c-Met) gene set	www.pathwaycomm...
Null Glypican 1 network	View Gene Set	0.005374	796	0.03744	24	NCI_NATURE - Glypican 1 network gene set	www.pathwaycomm...
Null TRAIL signaling pathway	View Gene Set	0.005049	686	0.03744	24	NCI_NATURE - TRAIL signaling pathway gene set	www.pathwaycomm...
Null Regulation of retinoblastoma protein	View Gene Set	0.004851	66	0.03744	24	NCI_NATURE - Regulation of retinoblastoma protein gene set	www.pathwaycomm...
Null TNF receptor signaling pathway	View Gene Set	0.00581	299	0.03859	28	NCI_NATURE - TNF receptor signaling pathway gene set	www.pathwaycomm...
Null Syndecan-1-mediated signaling events	View Gene Set	0.006492	688	0.04164	29	NCI_NATURE - Syndecan-1-mediated signaling events gene set	www.pathwaycomm...
Null Hypoxic and oxygen homeostasis regulation of HIF-1-alpha	View Gene Set	0.007044	80	0.04367	30	NCI_NATURE - Hypoxic and oxygen homeostasis regulation of HIF-1-alpha gene set	www.pathwaycomm...
Null Signaling events mediated by HDAC Class II	View Gene Set	0.007688	38	0.04613	31	NCI_NATURE - Signaling events mediated by HDAC Class II gene set	www.pathwaycomm...
Null Signaling mediated by p38-alpha and p38-beta	View Gene Set	0.008457	50	0.04916	32	NCI_NATURE - Signaling mediated by p38-alpha and p38-beta gene set	www.pathwaycomm...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null Cell Cycle Mitotic	View Gene Set	2.835e-26	312	3.167e-23	1	REACTOME - Cell Cycle Mitotic gene set	www.pathwaycomm... Mitotic&format=...
Null DNA Replication	View Gene Set	4.372e-17	200	2.442e-14	2	REACTOME - DNA Replication gene set	www.pathwaycomm...
Null Mitotic M-M/G1 phases	View Gene Set	2.888e-15	180	1.075e-12	3	REACTOME - Mitotic M-M/G1 phases gene set	www.pathwaycomm...
Null Processing of Capped Intron-Containing Pre-mRNA	View Gene Set	1.437e-12	138	4.013e-10	4	REACTOME - Processing of Capped Intron-Containing Pre-mRNA gene set	www.pathwaycomm...
Null M Phase	View Gene Set	3.448e-11	90	7.703e-09	5	REACTOME - M Phase gene set	www.pathwaycomm...
Null Formation and Maturation of mRNA Transcript	View Gene Set	6.806e-11	185	1.267e-08	6	REACTOME - Formation and Maturation of mRNA Transcript gene set	www.pathwaycomm...
Null mRNA Processing	View Gene Set	9.494e-11	158	1.314e-08	7	REACTOME - mRNA Processing gene set	www.pathwaycomm...
Null Gene Expression	View Gene Set	9.881e-11	381	1.314e-08	7	REACTOME - Gene Expression gene set	www.pathwaycomm...
Null Mitotic G2-G2/M phases	View Gene Set	1.058e-10	98	1.314e-08	7	REACTOME - Mitotic G2-G2/M phases gene set	www.pathwaycomm...
Null G2/M Transition	View Gene Set	2.59e-10	96	2.893e-08	10	REACTOME - G2/M Transition gene set	www.pathwaycomm...
Null Mitotic Prometaphase	View Gene Set	3.251e-10	86	3.302e-08	11	REACTOME - Mitotic Prometaphase gene set	www.pathwaycomm...
Null Mitotic G1-G1/S phases	View Gene Set	4.067e-10	113	3.629e-08	12	REACTOME - Mitotic G1-G1/S phases gene set	www.pathwaycomm...
Null Metabolism of RNA	View Gene Set	4.224e-10	174	3.629e-08	12	REACTOME - Metabolism of RNA gene set	www.pathwaycomm...
Null mRNA Splicing - Major Pathway	View Gene Set	5.363e-10	107	3.993e-08	14	REACTOME - mRNA Splicing - Major Pathway gene set	www.pathwaycomm...
Null mRNA Splicing	View Gene Set	5.363e-10	107	3.993e-08	14	REACTOME - mRNA Splicing gene set	www.pathwaycomm...
Null G1/S Transition	View Gene Set	9.837e-10	104	6.867e-08	16	REACTOME - G1/S Transition gene set	www.pathwaycomm...
Null Cell Cycle Checkpoints	View Gene Set	6.294e-09	124	4.135e-07	17	REACTOME - Cell Cycle Checkpoints gene set	www.pathwaycomm...
Null Regulation of mitotic cell cycle	View Gene Set	4.968e-08	95	2.921e-06	18	REACTOME - Regulation of mitotic cell cycle gene set	www.pathwaycomm...
Null APC/C-mediated degradation of cell cycle proteins	View Gene Set	4.968e-08	95	2.921e-06	18	REACTOME - APC/C-mediated degradation of cell cycle proteins gene set	www.pathwaycomm...
Null S Phase	View Gene Set	6.833e-08	113	3.816e-06	20	REACTOME - S Phase gene set	www.pathwaycomm...
Null Centrosome maturation	View Gene Set	8.858e-08	73	4.497e-06	21	REACTOME - Centrosome maturation gene set	www.pathwaycomm...
Null Recruitment of mitotic centrosome proteins and complexes	View Gene Set	8.858e-08	72	4.497e-06	21	REACTOME - Recruitment of mitotic centrosome proteins and complexes gene set	www.pathwaycomm...
Null Synthesis of DNA	View Gene Set	1.671e-07	102	8.116e-06	23	REACTOME - Synthesis of DNA gene set	www.pathwaycomm...
Null Activation of APC/C and APC/C:Cdc20 mediated degradation of mitotic proteins	View Gene Set	4.774e-07	86	2.222e-05	24	REACTOME - Activation of APC/C and APC/C:Cdc20 mediated degradation of mitotic proteins gene set	www.pathwaycomm...
Null Metabolism of mRNA	View Gene Set	7.992e-07	125	3.571e-05	25	REACTOME - Metabolism of mRNA gene set	www.pathwaycomm...
Null Regulation of DNA replication	View Gene Set	9.773e-07	81	4.198e-05	26	REACTOME - Regulation of DNA replication gene set	www.pathwaycomm...
Null Regulation of APC/C activators between G1/S and early anaphase	View Gene Set	1.136e-06	88	4.699e-05	27	REACTOME - Regulation of APC/C activators between G1/S and early anaphase gene set	www.pathwaycomm...
Null HIV Infection	View Gene Set	2.02e-06	194	8.057e-05	28	REACTOME - HIV Infection gene set	www.pathwaycomm...
Null DNA Replication Pre-Initiation	View Gene Set	2.983e-06	90	0.0001075	29	REACTOME - DNA Replication Pre-Initiation gene set	www.pathwaycomm...
Null M/G1 Transition	View Gene Set	2.983e-06	90	0.0001075	29	REACTOME - M/G1 Transition gene set	www.pathwaycomm...
Null Removal of licensing factors from origins	View Gene Set	2.859e-06	78	0.0001075	29	REACTOME - Removal of licensing factors from origins gene set	www.pathwaycomm...
Null Activation of ATR in response to replication stress	View Gene Set	4.222e-06	37	0.0001474	32	REACTOME - Activation of ATR in response to replication stress gene set	www.pathwaycomm...
Null Autodegradation of Cdh1 by Cdh1:APC/C	View Gene Set	4.43e-06	67	0.00015	33	REACTOME - Autodegradation of Cdh1 by Cdh1:APC/C gene set	www.pathwaycomm...
Null Switching of origins to a post-replicative state	View Gene Set	5.11e-06	76	0.0001631	34	REACTOME - Switching of origins to a post-replicative state gene set	www.pathwaycomm...
Null Orc1 removal from chromatin	View Gene Set	5.11e-06	76	0.0001631	34	REACTOME - Orc1 removal from chromatin gene set	www.pathwaycomm...
Null mRNA Splicing - Minor Pathway	View Gene Set	5.837e-06	42	0.0001762	36	REACTOME - mRNA Splicing - Minor Pathway gene set	www.pathwaycomm...
Null Transport of Mature mRNA derived from an Intron-Containing Transcript	View Gene Set	5.722e-06	51	0.0001762	36	REACTOME - Transport of Mature mRNA derived from an Intron-Containing Transcript gene set	www.pathwaycomm...
Null G2/M Checkpoints	View Gene Set	7.042e-06	43	0.0001918	38	REACTOME - G2/M Checkpoints gene set	www.pathwaycomm...
Null Loss of proteins required for interphase microtubule organizationÂ from the centrosome	View Gene Set	7.025e-06	62	0.0001918	38	REACTOME - Loss of proteins required for interphase microtubule organizationÂ from the centrosome gene set	www.pathwaycomm...
Null Loss of Nlp from mitotic centrosomes	View Gene Set	7.025e-06	62	0.0001918	38	REACTOME - Loss of Nlp from mitotic centrosomes gene set	www.pathwaycomm...
Null APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1	View Gene Set	6.697e-06	77	0.0001918	38	REACTOME - APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1 gene set	www.pathwaycomm...
Null Assembly of the pre-replicative complex	View Gene Set	7.47e-06	75	0.0001987	42	REACTOME - Assembly of the pre-replicative complex gene set	www.pathwaycomm...
Null APC/C:Cdc20 mediated degradation of mitotic proteins	View Gene Set	1.262e-05	77	0.0003278	43	REACTOME - APC/C:Cdc20 mediated degradation of mitotic proteins gene set	www.pathwaycomm...
Null Host Interactions of HIV factors	View Gene Set	1.451e-05	132	0.0003682	44	REACTOME - Host Interactions of HIV factors gene set	www.pathwaycomm...
Null Transport of Mature Transcript to Cytoplasm	View Gene Set	1.604e-05	55	0.0003982	45	REACTOME - Transport of Mature Transcript to Cytoplasm gene set	www.pathwaycomm...
Null E2F mediated regulation of DNA replication	View Gene Set	3.061e-05	28	0.0007432	46	REACTOME - E2F mediated regulation of DNA replication gene set	www.pathwaycomm...
Null Cdc20:Phospho-APC/C mediated degradation of Cyclin A	View Gene Set	3.178e-05	75	0.0007553	47	REACTOME - Cdc20:Phospho-APC/C mediated degradation of Cyclin A gene set	www.pathwaycomm...
Null Interactions of Rev with host cellular proteins	View Gene Set	3.682e-05	33	0.0008568	48	REACTOME - Interactions of Rev with host cellular proteins gene set	www.pathwaycomm...
Null Interactions of Vpr with host cellular proteins	View Gene Set	3.923e-05	34	0.0008943	49	REACTOME - Interactions of Vpr with host cellular proteins gene set	www.pathwaycomm...
Null G1/S-Specific Transcription	View Gene Set	4.219e-05	16	0.0009426	50	REACTOME - G1/S-Specific Transcription gene set	www.pathwaycomm...
Null Apoptosis	View Gene Set	4.945e-05	148	0.001083	51	REACTOME - Apoptosis gene set	www.pathwaycomm...
Null snRNP Assembly	View Gene Set	5.14e-05	50	0.001083	52	REACTOME - snRNP Assembly gene set	www.pathwaycomm...
Null Metabolism of non-coding RNA	View Gene Set	5.14e-05	50	0.001083	52	REACTOME - Metabolism of non-coding RNA gene set	www.pathwaycomm...
Null Metabolism of nucleotides	View Gene Set	5.474e-05	66	0.001112	54	REACTOME - Metabolism of nucleotides gene set	www.pathwaycomm...
Null Cyclin E associated events during G1/S transition	View Gene Set	5.39e-05	64	0.001112	54	REACTOME - Cyclin E associated events during G1/S transition gene set	www.pathwaycomm...
Null Regulation of mRNA Stability by Proteins that Bind AU-rich Elements	View Gene Set	6.067e-05	95	0.00121	56	REACTOME - Regulation of mRNA Stability by Proteins that Bind AU-rich Elements gene set	www.pathwaycomm...
Null Phosphorylation of the APC/C	View Gene Set	6.35e-05	26	0.001244	57	REACTOME - Phosphorylation of the APC/C gene set	www.pathwaycomm...
Null Cyclin A:Cdk2-associated events at S phase entry	View Gene Set	7.568e-05	62	0.001457	58	REACTOME - Cyclin A:Cdk2-associated events at S phase entry gene set	www.pathwaycomm...
Null Rev-mediated nuclear export of HIV-1 RNA	View Gene Set	8.227e-05	32	0.001558	59	REACTOME - Rev-mediated nuclear export of HIV-1 RNA gene set	www.pathwaycomm...
Null SCF(Skp2)-mediated degradation of p27/p21	View Gene Set	8.574e-05	52	0.001596	60	REACTOME - SCF(Skp2)-mediated degradation of p27/p21 gene set	www.pathwaycomm...
Null Vpr-mediated nuclear import of PICs	View Gene Set	0.0001067	31	0.001954	61	REACTOME - Vpr-mediated nuclear import of PICs gene set	www.pathwaycomm...
Null APC/C:Cdc20 mediated degradation of Securin	View Gene Set	0.0001103	72	0.001956	62	REACTOME - APC/C:Cdc20 mediated degradation of Securin gene set	www.pathwaycomm...
Null CDT1 association with the CDC6:ORC:origin complex	View Gene Set	0.0001099	66	0.001956	62	REACTOME - CDT1 association with the CDC6:ORC:origin complex gene set	www.pathwaycomm...
Null G2/M DNA damage checkpoint	View Gene Set	0.0001222	29	0.002133	64	REACTOME - G2/M DNA damage checkpoint gene set	www.pathwaycomm...
Null Nuclear import of Rev protein	View Gene Set	0.0001323	30	0.002274	65	REACTOME - Nuclear import of Rev protein gene set	www.pathwaycomm...
Null HIV Life Cycle	View Gene Set	0.0001829	103	0.003096	66	REACTOME - HIV Life Cycle gene set	www.pathwaycomm...
Null Deadenylation-dependent mRNA decay	View Gene Set	0.0001983	46	0.003306	67	REACTOME - Deadenylation-dependent mRNA decay gene set	www.pathwaycomm...
Null Pyrimidine metabolism	View Gene Set	0.0002138	23	0.003512	68	REACTOME - Pyrimidine metabolism gene set	www.pathwaycomm...
Null Activation of the pre-replicative complex	View Gene Set	0.0002292	30	0.00371	69	REACTOME - Activation of the pre-replicative complex gene set	www.pathwaycomm...
Null Pyrimidine biosynthesis	View Gene Set	0.0002402	6	0.003833	70	REACTOME - Pyrimidine biosynthesis gene set	www.pathwaycomm...
Null Transport of Ribonucleoproteins into the Host Nucleus	View Gene Set	0.0002807	29	0.004416	71	REACTOME - Transport of Ribonucleoproteins into the Host Nucleus gene set	www.pathwaycomm...
Null Regulation of ornithine decarboxylase (ODC)	View Gene Set	0.0003021	62	0.004636	72	REACTOME - Regulation of ornithine decarboxylase (ODC) gene set	www.pathwaycomm...
Null Destabilization of mRNA by AUF1 (hnRNP D0)	View Gene Set	0.000303	63	0.004636	72	REACTOME - Destabilization of mRNA by AUF1 (hnRNP D0) gene set	www.pathwaycomm...
Null NEP/NS2 Interacts with the Cellular Export Machinery	View Gene Set	0.0004145	29	0.006257	74	REACTOME - NEP/NS2 Interacts with the Cellular Export Machinery gene set	www.pathwaycomm...
Null Phosphorylation of Emi1	View Gene Set	0.0004237	12	0.00631	75	REACTOME - Phosphorylation of Emi1 gene set	www.pathwaycomm...
Null Transport of the SLBP independent Mature mRNA	View Gene Set	0.0004475	32	0.006577	76	REACTOME - Transport of the SLBP independent Mature mRNA gene set	www.pathwaycomm...
Null Export of Viral Ribonucleoproteins from Nucleus	View Gene Set	0.0004569	31	0.006628	77	REACTOME - Export of Viral Ribonucleoproteins from Nucleus gene set	www.pathwaycomm...
Null Transport of the SLBP Dependant Mature mRNA	View Gene Set	0.0004748	33	0.006799	78	REACTOME - Transport of the SLBP Dependant Mature mRNA gene set	www.pathwaycomm...
Null Unfolded Protein Response	View Gene Set	0.000544	63	0.007692	79	REACTOME - Unfolded Protein Response gene set	www.pathwaycomm...
Null Inhibition of the proteolytic activity of APC/C required for the onset of anaphase by mitotic spindle checkpoint components	View Gene Set	0.0005738	18	0.007912	80	REACTOME - Inhibition of the proteolytic activity of APC/C required for the onset of anaphase by mitotic spindle checkpoint components gene set	www.pathwaycomm...
Null Inactivation of APC/C via direct inhibition of the APC/C complex	View Gene Set	0.0005738	18	0.007912	80	REACTOME - Inactivation of APC/C via direct inhibition of the APC/C complex gene set	www.pathwaycomm...
Null Ubiquitin-dependent degradation of Cyclin D1	View Gene Set	0.0006925	59	0.009319	82	REACTOME - Ubiquitin-dependent degradation of Cyclin D1 gene set	www.pathwaycomm...
Null Ubiquitin-dependent degradation of Cyclin D	View Gene Set	0.0006925	59	0.009319	82	REACTOME - Ubiquitin-dependent degradation of Cyclin D gene set	www.pathwaycomm...
Null Mitotic Telophase /Cytokinesis	View Gene Set	0.0007759	10	0.01025	84	REACTOME - Mitotic Telophase /Cytokinesis gene set	www.pathwaycomm...
Null CDC6 association with the ORC:origin complex	View Gene Set	0.0007799	11	0.01025	84	REACTOME - CDC6 association with the ORC:origin complex gene set	www.pathwaycomm...
Null Formation of tubulin folding intermediates by CCT/TriC	View Gene Set	0.0009218	8	0.01197	86	REACTOME - Formation of tubulin folding intermediates by CCT/TriC gene set	www.pathwaycomm...
Null Recruitment of NuMA to mitotic centrosomes	View Gene Set	0.0009801	14	0.01258	87	REACTOME - Recruitment of NuMA to mitotic centrosomes gene set	www.pathwaycomm...
Null Folding of actin by CCT/TriC	View Gene Set	0.0009936	9	0.01261	88	REACTOME - Folding of actin by CCT/TriC gene set	www.pathwaycomm...
Null Transport of Mature mRNA Derived from an Intronless Transcript	View Gene Set	0.001132	35	0.01347	89	REACTOME - Transport of Mature mRNA Derived from an Intronless Transcript gene set	www.pathwaycomm...
Null Post-Elongation Processing of the Transcript	View Gene Set	0.001131	43	0.01347	89	REACTOME - Post-Elongation Processing of the Transcript gene set	www.pathwaycomm...
Null Cleavage of Growing Transcript in the Termination Region	View Gene Set	0.001131	43	0.01347	89	REACTOME - Cleavage of Growing Transcript in the Termination Region gene set	www.pathwaycomm...
Null RNA Polymerase II Transcription Termination	View Gene Set	0.001131	43	0.01347	89	REACTOME - RNA Polymerase II Transcription Termination gene set	www.pathwaycomm...
Null CDK-mediated phosphorylation and removal of Cdc6	View Gene Set	0.001134	58	0.01347	89	REACTOME - CDK-mediated phosphorylation and removal of Cdc6 gene set	www.pathwaycomm...
Null Deadenylation of mRNA	View Gene Set	0.001119	22	0.01347	89	REACTOME - Deadenylation of mRNA gene set	www.pathwaycomm...
Null Transport of Mature mRNAs Derived from Intronless Transcripts	View Gene Set	0.001168	36	0.01373	95	REACTOME - Transport of Mature mRNAs Derived from Intronless Transcripts gene set	www.pathwaycomm...
Null DNA strand elongation	View Gene Set	0.001254	31	0.01459	96	REACTOME - DNA strand elongation gene set	www.pathwaycomm...
Null Late Phase of HIV Life Cycle	View Gene Set	0.001271	92	0.01464	97	REACTOME - Late Phase of HIV Life Cycle gene set	www.pathwaycomm...
Null Cooperation of Prefoldin and TriC/CCT in actin and tubulin folding	View Gene Set	0.001413	15	0.0161	98	REACTOME - Cooperation of Prefoldin and TriC/CCT in actin and tubulin folding gene set	www.pathwaycomm...
Null Gap-filling DNA repair synthesis and ligation in TC-NER	View Gene Set	0.001453	16	0.01623	99	REACTOME - Gap-filling DNA repair synthesis and ligation in TC-NER gene set	www.pathwaycomm...
Null Gap-filling DNA repair synthesis and ligation in GG-NER	View Gene Set	0.001453	16	0.01623	99	REACTOME - Gap-filling DNA repair synthesis and ligation in GG-NER gene set	www.pathwaycomm...
Null Prefoldin mediated transfer of substrate to CCT/TriC	View Gene Set	0.001509	14	0.01669	101	REACTOME - Prefoldin mediated transfer of substrate to CCT/TriC gene set	www.pathwaycomm...
Null Activation of Chaperones by IRE1alpha	View Gene Set	0.001544	45	0.01691	102	REACTOME - Activation of Chaperones by IRE1alpha gene set	www.pathwaycomm...
Null G1/S DNA Damage Checkpoints	View Gene Set	0.001597	68	0.01732	103	REACTOME - G1/S DNA Damage Checkpoints gene set	www.pathwaycomm...
Null Transcription	View Gene Set	0.001691	178	0.01799	104	REACTOME - Transcription gene set	www.pathwaycomm...
Null Association of TriC/CCT with target proteins during biosynthesis	View Gene Set	0.001688	9	0.01799	104	REACTOME - Association of TriC/CCT with target proteins during biosynthesis gene set	www.pathwaycomm...
Null Regulation of activated PAK-2p34 by proteasome mediated degradation	View Gene Set	0.001836	57	0.01935	106	REACTOME - Regulation of activated PAK-2p34 by proteasome mediated degradation gene set	www.pathwaycomm...
Null SCF-beta-TrCP mediated degradation of Emi1	View Gene Set	0.001877	60	0.0196	107	REACTOME - SCF-beta-TrCP mediated degradation of Emi1 gene set	www.pathwaycomm...
Null Chaperonin-mediated protein folding	View Gene Set	0.001941	16	0.02008	108	REACTOME - Chaperonin-mediated protein folding gene set	www.pathwaycomm...
Null Extension of Telomeres	View Gene Set	0.002015	28	0.02028	109	REACTOME - Extension of Telomeres gene set	www.pathwaycomm...
Null p53-Independent G1/S DNA damage checkpoint	View Gene Set	0.002	62	0.02028	109	REACTOME - p53-Independent G1/S DNA damage checkpoint gene set	www.pathwaycomm...
Null p53-Independent DNA Damage Response	View Gene Set	0.002	62	0.02028	109	REACTOME - p53-Independent DNA Damage Response gene set	www.pathwaycomm...
Null Double-Strand Break Repair	View Gene Set	0.002201	27	0.02195	112	REACTOME - Double-Strand Break Repair gene set	www.pathwaycomm...
Null Post-Elongation Processing of Intron-Containing pre-mRNA	View Gene Set	0.002268	34	0.02223	113	REACTOME - Post-Elongation Processing of Intron-Containing pre-mRNA gene set	www.pathwaycomm...
Null mRNA 3'-end processing	View Gene Set	0.002268	34	0.02223	113	REACTOME - mRNA 3'-end processing gene set	www.pathwaycomm...
Null Mitotic Spindle Checkpoint	View Gene Set	0.002496	19	0.02365	115	REACTOME - Mitotic Spindle Checkpoint gene set	www.pathwaycomm...
Null RNA Polymerase II Transcription	View Gene Set	0.002463	101	0.02365	115	REACTOME - RNA Polymerase II Transcription gene set	www.pathwaycomm...
Null Metabolism of proteins	View Gene Set	0.002499	263	0.02365	115	REACTOME - Metabolism of proteins gene set	www.pathwaycomm...
Null Cyclin A/B1 associated events during G2/M transition	View Gene Set	0.002464	19	0.02365	115	REACTOME - Cyclin A/B1 associated events during G2/M transition gene set	www.pathwaycomm...
Null Regulation of Apoptosis	View Gene Set	0.002536	66	0.0238	119	REACTOME - Regulation of Apoptosis gene set	www.pathwaycomm...
Null p53-Dependent G1/S DNA damage checkpoint	View Gene Set	0.002688	64	0.02481	120	REACTOME - p53-Dependent G1/S DNA damage checkpoint gene set	www.pathwaycomm...
Null p53-Dependent G1 DNA Damage Response	View Gene Set	0.002688	64	0.02481	120	REACTOME - p53-Dependent G1 DNA Damage Response gene set	www.pathwaycomm...
Null Degradation of beta-catenin by the destruction complex	View Gene Set	0.002817	56	0.02556	122	REACTOME - Degradation of beta-catenin by the destruction complex gene set	www.pathwaycomm...
Null Signaling by Wnt	View Gene Set	0.002817	56	0.02556	122	REACTOME - Signaling by Wnt gene set	www.pathwaycomm...
Null Purine ribonucleoside monophosphate biosynthesis	View Gene Set	0.002838	7	0.02556	122	REACTOME - Purine ribonucleoside monophosphate biosynthesis gene set	www.pathwaycomm...
Null Ubiquitin Mediated Degradation of Phosphorylated Cdc25A	View Gene Set	0.002999	61	0.02658	125	REACTOME - Ubiquitin Mediated Degradation of Phosphorylated Cdc25A gene set	www.pathwaycomm...
Null Autodegradation of the E3 ubiquitin ligase COP1	View Gene Set	0.002996	60	0.02658	125	REACTOME - Autodegradation of the E3 ubiquitin ligase COP1 gene set	www.pathwaycomm...
Null Conversion from APC/C:Cdc20 to APC/C:Cdh1 in late anaphase	View Gene Set	0.003143	16	0.02764	127	REACTOME - Conversion from APC/C:Cdc20 to APC/C:Cdh1 in late anaphase gene set	www.pathwaycomm...
Null APC-Cdc20 mediated degradation of Nek2A	View Gene Set	0.003179	23	0.02774	128	REACTOME - APC-Cdc20 mediated degradation of Nek2A gene set	www.pathwaycomm...
Null Pyrimidine salvage reactions	View Gene Set	0.003244	8	0.02787	129	REACTOME - Pyrimidine salvage reactions gene set	www.pathwaycomm...
Null DNA Repair	View Gene Set	0.003242	108	0.02787	129	REACTOME - DNA Repair gene set	www.pathwaycomm...
Null Processive synthesis on the C-strand of the telomere	View Gene Set	0.003443	11	0.02914	131	REACTOME - Processive synthesis on the C-strand of the telomere gene set	www.pathwaycomm...
Null Synthesis and interconversion of nucleotide di- and triphosphates	View Gene Set	0.003426	16	0.02914	131	REACTOME - Synthesis and interconversion of nucleotide di- and triphosphates gene set	www.pathwaycomm...
Null Vpu mediated degradation of CD4	View Gene Set	0.003629	57	0.03048	133	REACTOME - Vpu mediated degradation of CD4 gene set	www.pathwaycomm...
Null Stabilization of p53	View Gene Set	0.003827	61	0.0319	134	REACTOME - Stabilization of p53 gene set	www.pathwaycomm...
Null Recycling pathway of L1	View Gene Set	0.003957	34	0.03226	135	REACTOME - Recycling pathway of L1 gene set	www.pathwaycomm...
Null Homologous Recombination Repair	View Gene Set	0.003956	22	0.03226	135	REACTOME - Homologous Recombination Repair gene set	www.pathwaycomm...
Null Homologous recombination repair of replication-independent double-strand breaks	View Gene Set	0.003956	22	0.03226	135	REACTOME - Homologous recombination repair of replication-independent double-strand breaks gene set	www.pathwaycomm...
Null Activation of NOXA and translocation to mitochondria	View Gene Set	0.004061	4	0.0324	138	REACTOME - Activation of NOXA and translocation to mitochondria gene set	www.pathwaycomm...
Null Repair synthesis for gap-filling by DNA polymerase in TC-NER	View Gene Set	0.004049	15	0.0324	138	REACTOME - Repair synthesis for gap-filling by DNA polymerase in TC-NER gene set	www.pathwaycomm...
Null Repair synthesis of patch ~27-30 bases long by DNA polymerase	View Gene Set	0.004049	15	0.0324	138	REACTOME - Repair synthesis of patch ~27-30 bases long by DNA polymerase gene set	www.pathwaycomm...
Null Collagen adhesion via alpha 2 beta 1 glycoprotein	View Gene Set	0.004531	4	0.0359	141	REACTOME - Collagen adhesion via alpha 2 beta 1 glycoprotein gene set	www.pathwaycomm...
Null Mitochondrial Fatty Acid Beta-Oxidation	View Gene Set	0.005463	14	0.04297	142	REACTOME - Mitochondrial Fatty Acid Beta-Oxidation gene set	www.pathwaycomm...
Null Mitotic Metaphase/Anaphase Transition	View Gene Set	0.005702	8	0.04454	143	REACTOME - Mitotic Metaphase/Anaphase Transition gene set	www.pathwaycomm...
Null Regulation of Glucokinase by Glucokinase Regulatory Protein	View Gene Set	0.00583	29	0.04522	144	REACTOME - Regulation of Glucokinase by Glucokinase Regulatory Protein gene set	www.pathwaycomm...
Null Chromosome Maintenance	View Gene Set	0.006326	69	0.04873	145	REACTOME - Chromosome Maintenance gene set	www.pathwaycomm...

Gene Set Collection: miranda.targets

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null hsa-miR-548d-3p	View Gene Set	1.326e-10	2210	4.49e-08	1	microRNA targets for hsa-miR-548d-3p from miranda.targets	www.mirbase.org...
Null hsa-miR-561	View Gene Set	1.182e-10	2925	4.49e-08	1	microRNA targets for hsa-miR-561 from miranda.targets	www.mirbase.org...
Null hsa-miR-548e	View Gene Set	2.358e-09	2325	5.321e-07	3	microRNA targets for hsa-miR-548e from miranda.targets	www.mirbase.org...
Null hsa-miR-548c-3p	View Gene Set	9.036e-09	3130	1.529e-06	4	microRNA targets for hsa-miR-548c-3p from miranda.targets	www.mirbase.org...
Null hsa-miR-200c	View Gene Set	3.818e-08	1794	5.17e-06	5	microRNA targets for hsa-miR-200c from miranda.targets	www.mirbase.org...
Null hsa-miR-20a	View Gene Set	2.451e-07	2324	2.044e-05	6	microRNA targets for hsa-miR-20a from miranda.targets	www.mirbase.org...
Null hsa-miR-548a-3p	View Gene Set	2.038e-07	2420	2.044e-05	6	microRNA targets for hsa-miR-548a-3p from miranda.targets	www.mirbase.org...
Null hsa-miR-548f	View Gene Set	2.365e-07	2082	2.044e-05	6	microRNA targets for hsa-miR-548f from miranda.targets	www.mirbase.org...
Null hsa-miR-590-3p	View Gene Set	2.718e-07	3575	2.044e-05	6	microRNA targets for hsa-miR-590-3p from miranda.targets	www.mirbase.org...
Null hsa-miR-548n	View Gene Set	3.293e-07	3830	2.23e-05	10	microRNA targets for hsa-miR-548n from miranda.targets	www.mirbase.org...
Null hsa-miR-1283	View Gene Set	3.929e-07	1960	2.418e-05	11	microRNA targets for hsa-miR-1283 from miranda.targets	www.mirbase.org...
Null hsa-miR-200b	View Gene Set	5.796e-07	1789	3.27e-05	12	microRNA targets for hsa-miR-200b from miranda.targets	www.mirbase.org...
Null hsa-miR-106a	View Gene Set	8.044e-07	2173	3.89e-05	13	microRNA targets for hsa-miR-106a from miranda.targets	www.mirbase.org...
Null hsa-miR-17	View Gene Set	8.044e-07	2173	3.89e-05	13	microRNA targets for hsa-miR-17 from miranda.targets	www.mirbase.org...
Null hsa-miR-142-5p	View Gene Set	9.658e-07	2312	4.334e-05	15	microRNA targets for hsa-miR-142-5p from miranda.targets	www.mirbase.org...
Null hsa-miR-429	View Gene Set	1.133e-06	1921	4.334e-05	15	microRNA targets for hsa-miR-429 from miranda.targets	www.mirbase.org...
Null hsa-miR-548g	View Gene Set	1.189e-06	2114	4.334e-05	15	microRNA targets for hsa-miR-548g from miranda.targets	www.mirbase.org...
Null hsa-miR-577	View Gene Set	1.28e-06	2745	4.334e-05	15	microRNA targets for hsa-miR-577 from miranda.targets	www.mirbase.org...
Null hsa-miR-655	View Gene Set	1.279e-06	1858	4.334e-05	15	microRNA targets for hsa-miR-655 from miranda.targets	www.mirbase.org...
Null hsa-miR-873	View Gene Set	1.207e-06	1393	4.334e-05	15	microRNA targets for hsa-miR-873 from miranda.targets	www.mirbase.org...
Null hsa-miR-633	View Gene Set	1.74e-06	1452	5.611e-05	21	microRNA targets for hsa-miR-633 from miranda.targets	www.mirbase.org...
Null hsa-miR-548j	View Gene Set	1.894e-06	2652	5.829e-05	22	microRNA targets for hsa-miR-548j from miranda.targets	www.mirbase.org...
Null hsa-miR-548a-5p	View Gene Set	2.313e-06	2983	6.809e-05	23	microRNA targets for hsa-miR-548a-5p from miranda.targets	www.mirbase.org...
Null hsa-miR-524-5p	View Gene Set	3.478e-06	2574	9.811e-05	24	microRNA targets for hsa-miR-524-5p from miranda.targets	www.mirbase.org...
Null hsa-miR-548i	View Gene Set	3.727e-06	2860	0.0001009	25	microRNA targets for hsa-miR-548i from miranda.targets	www.mirbase.org...
Null hsa-miR-548o	View Gene Set	4.066e-06	2216	0.0001059	26	microRNA targets for hsa-miR-548o from miranda.targets	www.mirbase.org...
Null hsa-miR-320c	View Gene Set	4.406e-06	1860	0.0001105	27	microRNA targets for hsa-miR-320c from miranda.targets	www.mirbase.org...
Null hsa-miR-548c-5p	View Gene Set	4.832e-06	2909	0.0001167	28	microRNA targets for hsa-miR-548c-5p from miranda.targets	www.mirbase.org...
Null hsa-miR-935	View Gene Set	4.998e-06	943	0.0001167	28	microRNA targets for hsa-miR-935 from miranda.targets	www.mirbase.org...
Null hsa-miR-559	View Gene Set	5.315e-06	2900	0.0001199	30	microRNA targets for hsa-miR-559 from miranda.targets	www.mirbase.org...
Null hsa-miR-548h	View Gene Set	5.787e-06	2539	0.0001264	31	microRNA targets for hsa-miR-548h from miranda.targets	www.mirbase.org...
Null hsa-miR-183	View Gene Set	1.048e-05	1239	0.0002216	32	microRNA targets for hsa-miR-183 from miranda.targets	www.mirbase.org...
Null hsa-miR-320d	View Gene Set	1.113e-05	1719	0.0002284	33	microRNA targets for hsa-miR-320d from miranda.targets	www.mirbase.org...
Null hsa-miR-607	View Gene Set	1.198e-05	2322	0.0002386	34	microRNA targets for hsa-miR-607 from miranda.targets	www.mirbase.org...
Null hsa-miR-641	View Gene Set	1.291e-05	2384	0.0002497	35	microRNA targets for hsa-miR-641 from miranda.targets	www.mirbase.org...
Null hsa-miR-380	View Gene Set	1.512e-05	1449	0.0002843	36	microRNA targets for hsa-miR-380 from miranda.targets	www.mirbase.org...
Null hsa-miR-26b	View Gene Set	1.777e-05	1511	0.0003252	37	microRNA targets for hsa-miR-26b from miranda.targets	www.mirbase.org...
Null hsa-miR-1197	View Gene Set	1.86e-05	1210	0.0003313	38	microRNA targets for hsa-miR-1197 from miranda.targets	www.mirbase.org...
Null hsa-miR-320a	View Gene Set	2.07e-05	2080	0.0003503	39	microRNA targets for hsa-miR-320a from miranda.targets	www.mirbase.org...
Null hsa-miR-320b	View Gene Set	2.07e-05	2080	0.0003503	39	microRNA targets for hsa-miR-320b from miranda.targets	www.mirbase.org...
Null hsa-miR-186	View Gene Set	2.344e-05	2681	0.000387	41	microRNA targets for hsa-miR-186 from miranda.targets	www.mirbase.org...
Null hsa-miR-1323	View Gene Set	2.415e-05	2071	0.0003892	42	microRNA targets for hsa-miR-1323 from miranda.targets	www.mirbase.org...
Null hsa-miR-377	View Gene Set	2.594e-05	1713	0.0004084	43	microRNA targets for hsa-miR-377 from miranda.targets	www.mirbase.org...
Null hsa-miR-513a-3p	View Gene Set	2.922e-05	2711	0.0004481	44	microRNA targets for hsa-miR-513a-3p from miranda.targets	www.mirbase.org...
Null hsa-miR-548b-5p	View Gene Set	2.979e-05	3175	0.0004481	44	microRNA targets for hsa-miR-548b-5p from miranda.targets	www.mirbase.org...
Null hsa-miR-217	View Gene Set	3.271e-05	1316	0.0004712	46	microRNA targets for hsa-miR-217 from miranda.targets	www.mirbase.org...
Null hsa-miR-606	View Gene Set	3.256e-05	1040	0.0004712	46	microRNA targets for hsa-miR-606 from miranda.targets	www.mirbase.org...
Null hsa-miR-891b	View Gene Set	3.795e-05	1022	0.0005353	48	microRNA targets for hsa-miR-891b from miranda.targets	www.mirbase.org...
Null hsa-miR-212	View Gene Set	4.432e-05	1096	0.0006091	49	microRNA targets for hsa-miR-212 from miranda.targets	www.mirbase.org...
Null hsa-miR-582-5p	View Gene Set	4.499e-05	1971	0.0006091	49	microRNA targets for hsa-miR-582-5p from miranda.targets	www.mirbase.org...
Null hsa-miR-802	View Gene Set	4.762e-05	1859	0.0006321	51	microRNA targets for hsa-miR-802 from miranda.targets	www.mirbase.org...
Null hsa-miR-132	View Gene Set	5.86e-05	1259	0.0007629	52	microRNA targets for hsa-miR-132 from miranda.targets	www.mirbase.org...
Null hsa-miR-448	View Gene Set	6.131e-05	1660	0.0007831	53	microRNA targets for hsa-miR-448 from miranda.targets	www.mirbase.org...
Null hsa-miR-494	View Gene Set	7.563e-05	1886	0.0009482	54	microRNA targets for hsa-miR-494 from miranda.targets	www.mirbase.org...
Null hsa-miR-195	View Gene Set	8.159e-05	2219	0.001004	55	microRNA targets for hsa-miR-195 from miranda.targets	www.mirbase.org...
Null hsa-miR-302b	View Gene Set	9.379e-05	2091	0.001095	56	microRNA targets for hsa-miR-302b from miranda.targets	www.mirbase.org...
Null hsa-miR-340	View Gene Set	9.324e-05	2504	0.001095	56	microRNA targets for hsa-miR-340 from miranda.targets	www.mirbase.org...
Null hsa-miR-491-3p	View Gene Set	9.098e-05	1136	0.001095	56	microRNA targets for hsa-miR-491-3p from miranda.targets	www.mirbase.org...
Null hsa-miR-30b	View Gene Set	9.932e-05	1695	0.001107	59	microRNA targets for hsa-miR-30b from miranda.targets	www.mirbase.org...
Null hsa-miR-768-3p	View Gene Set	9.937e-05	2025	0.001107	59	microRNA targets for hsa-miR-768-3p from miranda.targets	www.mirbase.org...
Null hsa-miR-888	View Gene Set	9.973e-05	1379	0.001107	59	microRNA targets for hsa-miR-888 from miranda.targets	www.mirbase.org...
Null hsa-miR-454	View Gene Set	0.0001052	1949	0.001131	62	microRNA targets for hsa-miR-454 from miranda.targets	www.mirbase.org...
Null hsa-miR-548p	View Gene Set	0.0001038	2743	0.001131	62	microRNA targets for hsa-miR-548p from miranda.targets	www.mirbase.org...
Null hsa-miR-520d-5p	View Gene Set	0.0001097	2061	0.001161	64	microRNA targets for hsa-miR-520d-5p from miranda.targets	www.mirbase.org...
Null hsa-miR-570	View Gene Set	0.0001217	3124	0.001249	65	microRNA targets for hsa-miR-570 from miranda.targets	www.mirbase.org...
Null hsa-miR-605	View Gene Set	0.0001215	1295	0.001249	65	microRNA targets for hsa-miR-605 from miranda.targets	www.mirbase.org...
Null hsa-miR-144	View Gene Set	0.000137	1767	0.001384	67	microRNA targets for hsa-miR-144 from miranda.targets	www.mirbase.org...
Null hsa-miR-513b	View Gene Set	0.0001397	1603	0.001391	68	microRNA targets for hsa-miR-513b from miranda.targets	www.mirbase.org...
Null hsa-miR-181c	View Gene Set	0.0001474	1844	0.001446	69	microRNA targets for hsa-miR-181c from miranda.targets	www.mirbase.org...
Null hsa-miR-30a	View Gene Set	0.0001579	1611	0.001527	70	microRNA targets for hsa-miR-30a from miranda.targets	www.mirbase.org...
Null hsa-miR-1297	View Gene Set	0.0001629	1019	0.001553	71	microRNA targets for hsa-miR-1297 from miranda.targets	www.mirbase.org...
Null hsa-miR-301a	View Gene Set	0.0001803	2114	0.001695	72	microRNA targets for hsa-miR-301a from miranda.targets	www.mirbase.org...
Null hsa-miR-580	View Gene Set	0.0001871	2207	0.001735	73	microRNA targets for hsa-miR-580 from miranda.targets	www.mirbase.org...
Null hsa-miR-18a	View Gene Set	0.0002042	1494	0.001868	74	microRNA targets for hsa-miR-18a from miranda.targets	www.mirbase.org...
Null hsa-miR-567	View Gene Set	0.0002166	1183	0.001956	75	microRNA targets for hsa-miR-567 from miranda.targets	www.mirbase.org...
Null hsa-miR-301b	View Gene Set	0.0002229	2090	0.001986	76	microRNA targets for hsa-miR-301b from miranda.targets	www.mirbase.org...
Null hsa-miR-124	View Gene Set	0.0002344	1319	0.002028	77	microRNA targets for hsa-miR-124 from miranda.targets	www.mirbase.org...
Null hsa-miR-181d	View Gene Set	0.0002397	2212	0.002028	77	microRNA targets for hsa-miR-181d from miranda.targets	www.mirbase.org...
Null hsa-miR-222	View Gene Set	0.0002364	868	0.002028	77	microRNA targets for hsa-miR-222 from miranda.targets	www.mirbase.org...
Null hsa-miR-522	View Gene Set	0.0002387	1877	0.002028	77	microRNA targets for hsa-miR-522 from miranda.targets	www.mirbase.org...
Null hsa-miR-19b	View Gene Set	0.000247	2017	0.002064	81	microRNA targets for hsa-miR-19b from miranda.targets	www.mirbase.org...
Null hsa-miR-20b	View Gene Set	0.0002763	2122	0.002281	82	microRNA targets for hsa-miR-20b from miranda.targets	www.mirbase.org...
Null hsa-miR-1252	View Gene Set	0.0002817	3125	0.002298	83	microRNA targets for hsa-miR-1252 from miranda.targets	www.mirbase.org...
Null hsa-miR-106b	View Gene Set	0.000294	1804	0.002346	84	microRNA targets for hsa-miR-106b from miranda.targets	www.mirbase.org...
Null hsa-miR-28-3p	View Gene Set	0.0002981	838	0.002346	84	microRNA targets for hsa-miR-28-3p from miranda.targets	www.mirbase.org...
Null hsa-miR-548d-5p	View Gene Set	0.0002952	3270	0.002346	84	microRNA targets for hsa-miR-548d-5p from miranda.targets	www.mirbase.org...
Null hsa-miR-16	View Gene Set	0.0003113	2258	0.002422	87	microRNA targets for hsa-miR-16 from miranda.targets	www.mirbase.org...
Null hsa-miR-519c-3p	View Gene Set	0.0003385	2011	0.002605	88	microRNA targets for hsa-miR-519c-3p from miranda.targets	www.mirbase.org...
Null hsa-miR-30e	View Gene Set	0.0003788	1792	0.002882	89	microRNA targets for hsa-miR-30e from miranda.targets	www.mirbase.org...
Null hsa-miR-369-3p	View Gene Set	0.0003907	1454	0.002936	90	microRNA targets for hsa-miR-369-3p from miranda.targets	www.mirbase.org...
Null hsa-miR-664	View Gene Set	0.0003947	2111	0.002936	90	microRNA targets for hsa-miR-664 from miranda.targets	www.mirbase.org...
Null hsa-miR-30d	View Gene Set	0.0004134	1500	0.003042	92	microRNA targets for hsa-miR-30d from miranda.targets	www.mirbase.org...
Null hsa-miR-1264	View Gene Set	0.0004371	2008	0.003182	93	microRNA targets for hsa-miR-1264 from miranda.targets	www.mirbase.org...
Null hsa-miR-338-5p	View Gene Set	0.0004578	1707	0.003297	94	microRNA targets for hsa-miR-338-5p from miranda.targets	www.mirbase.org...
Null hsa-miR-1278	View Gene Set	0.0004633	1219	0.003302	95	microRNA targets for hsa-miR-1278 from miranda.targets	www.mirbase.org...
Null hsa-miR-1284	View Gene Set	0.0004937	1108	0.003482	96	microRNA targets for hsa-miR-1284 from miranda.targets	www.mirbase.org...
Null hsa-miR-30c	View Gene Set	0.0005246	1792	0.003661	97	microRNA targets for hsa-miR-30c from miranda.targets	www.mirbase.org...
Null hsa-miR-944	View Gene Set	0.0005446	2438	0.003762	98	microRNA targets for hsa-miR-944 from miranda.targets	www.mirbase.org...
Null hsa-miR-216b	View Gene Set	0.0005587	1416	0.003784	99	microRNA targets for hsa-miR-216b from miranda.targets	www.mirbase.org...
Null hsa-miR-513c	View Gene Set	0.0005589	1451	0.003784	99	microRNA targets for hsa-miR-513c from miranda.targets	www.mirbase.org...
Null hsa-miR-139-5p	View Gene Set	0.0006057	1222	0.00406	101	microRNA targets for hsa-miR-139-5p from miranda.targets	www.mirbase.org...
Null hsa-miR-518a-5p	View Gene Set	0.0006228	1605	0.004093	102	microRNA targets for hsa-miR-518a-5p from miranda.targets	www.mirbase.org...
Null hsa-miR-527	View Gene Set	0.0006228	1605	0.004093	102	microRNA targets for hsa-miR-527 from miranda.targets	www.mirbase.org...
Null hsa-miR-544	View Gene Set	0.0007234	2072	0.004709	104	microRNA targets for hsa-miR-544 from miranda.targets	www.mirbase.org...
Null hsa-miR-374a	View Gene Set	0.0007334	1933	0.004729	105	microRNA targets for hsa-miR-374a from miranda.targets	www.mirbase.org...
Null hsa-miR-130a	View Gene Set	0.0007782	1687	0.00497	106	microRNA targets for hsa-miR-130a from miranda.targets	www.mirbase.org...
Null hsa-miR-105	View Gene Set	0.0008021	1644	0.004989	107	microRNA targets for hsa-miR-105 from miranda.targets	www.mirbase.org...
Null hsa-miR-19a	View Gene Set	0.0008032	2189	0.004989	107	microRNA targets for hsa-miR-19a from miranda.targets	www.mirbase.org...
Null hsa-miR-576-5p	View Gene Set	0.0008017	1494	0.004989	107	microRNA targets for hsa-miR-576-5p from miranda.targets	www.mirbase.org...
Null hsa-miR-374b	View Gene Set	0.0009195	1802	0.005659	110	microRNA targets for hsa-miR-374b from miranda.targets	www.mirbase.org...
Null hsa-miR-506	View Gene Set	0.0009372	1386	0.005716	111	microRNA targets for hsa-miR-506 from miranda.targets	www.mirbase.org...
Null hsa-miR-330-3p	View Gene Set	0.0009774	2124	0.005908	112	microRNA targets for hsa-miR-330-3p from miranda.targets	www.mirbase.org...
Null hsa-miR-302a	View Gene Set	0.001051	2054	0.006298	113	microRNA targets for hsa-miR-302a from miranda.targets	www.mirbase.org...
Null hsa-miR-130b	View Gene Set	0.001103	1682	0.006503	114	microRNA targets for hsa-miR-130b from miranda.targets	www.mirbase.org...
Null hsa-miR-23a	View Gene Set	0.001105	1861	0.006503	114	microRNA targets for hsa-miR-23a from miranda.targets	www.mirbase.org...
Null hsa-miR-1253	View Gene Set	0.001142	1976	0.006546	116	microRNA targets for hsa-miR-1253 from miranda.targets	www.mirbase.org...
Null hsa-miR-27b	View Gene Set	0.001135	1732	0.006546	116	microRNA targets for hsa-miR-27b from miranda.targets	www.mirbase.org...
Null hsa-miR-367	View Gene Set	0.00117	1270	0.006546	116	microRNA targets for hsa-miR-367 from miranda.targets	www.mirbase.org...
Null hsa-miR-431	View Gene Set	0.001153	695	0.006546	116	microRNA targets for hsa-miR-431 from miranda.targets	www.mirbase.org...
Null hsa-miR-543	View Gene Set	0.00117	1457	0.006546	116	microRNA targets for hsa-miR-543 from miranda.targets	www.mirbase.org...
Null hsa-miR-579	View Gene Set	0.001168	1840	0.006546	116	microRNA targets for hsa-miR-579 from miranda.targets	www.mirbase.org...
Null hsa-miR-411	View Gene Set	0.001215	558	0.006743	122	microRNA targets for hsa-miR-411 from miranda.targets	www.mirbase.org...
Null hsa-miR-26a	View Gene Set	0.001253	1414	0.006898	123	microRNA targets for hsa-miR-26a from miranda.targets	www.mirbase.org...
Null hsa-miR-545	View Gene Set	0.001309	2246	0.007146	124	microRNA targets for hsa-miR-545 from miranda.targets	www.mirbase.org...
Null hsa-miR-424	View Gene Set	0.00134	2392	0.007257	125	microRNA targets for hsa-miR-424 from miranda.targets	www.mirbase.org...
Null hsa-miR-203	View Gene Set	0.001368	2295	0.00732	126	microRNA targets for hsa-miR-203 from miranda.targets	www.mirbase.org...
Null hsa-miR-93	View Gene Set	0.001373	2077	0.00732	126	microRNA targets for hsa-miR-93 from miranda.targets	www.mirbase.org...
Null hsa-miR-548m	View Gene Set	0.00143	2295	0.007566	128	microRNA targets for hsa-miR-548m from miranda.targets	www.mirbase.org...
Null hsa-miR-421	View Gene Set	0.001496	1629	0.007851	129	microRNA targets for hsa-miR-421 from miranda.targets	www.mirbase.org...
Null hsa-miR-548l	View Gene Set	0.001544	2599	0.008039	130	microRNA targets for hsa-miR-548l from miranda.targets	www.mirbase.org...
Null hsa-miR-140-5p	View Gene Set	0.001573	1363	0.008107	131	microRNA targets for hsa-miR-140-5p from miranda.targets	www.mirbase.org...
Null hsa-miR-640	View Gene Set	0.001581	876	0.008107	131	microRNA targets for hsa-miR-640 from miranda.targets	www.mirbase.org...
Null hsa-miR-216a	View Gene Set	0.001651	1454	0.008406	133	microRNA targets for hsa-miR-216a from miranda.targets	www.mirbase.org...
Null hsa-miR-92a	View Gene Set	0.00168	987	0.008488	134	microRNA targets for hsa-miR-92a from miranda.targets	www.mirbase.org...
Null hsa-miR-302c	View Gene Set	0.001722	2046	0.008638	135	microRNA targets for hsa-miR-302c from miranda.targets	www.mirbase.org...
Null hsa-miR-302d	View Gene Set	0.001754	2056	0.008732	136	microRNA targets for hsa-miR-302d from miranda.targets	www.mirbase.org...
Null hsa-miR-135a	View Gene Set	0.001795	2105	0.008871	137	microRNA targets for hsa-miR-135a from miranda.targets	www.mirbase.org...
Null hsa-miR-433	View Gene Set	0.001987	973	0.009677	138	microRNA targets for hsa-miR-433 from miranda.targets	www.mirbase.org...
Null hsa-miR-519a	View Gene Set	0.00198	1837	0.009677	138	microRNA targets for hsa-miR-519a from miranda.targets	www.mirbase.org...
Null hsa-miR-548k	View Gene Set	0.002088	1874	0.01009	140	microRNA targets for hsa-miR-548k from miranda.targets	www.mirbase.org...
Null hsa-miR-1272	View Gene Set	0.002259	1955	0.01085	141	microRNA targets for hsa-miR-1272 from miranda.targets	www.mirbase.org...
Null hsa-miR-335	View Gene Set	0.00228	1631	0.01087	142	microRNA targets for hsa-miR-335 from miranda.targets	www.mirbase.org...
Null hsa-miR-586	View Gene Set	0.002521	2421	0.01194	143	microRNA targets for hsa-miR-586 from miranda.targets	www.mirbase.org...
Null hsa-miR-519b-3p	View Gene Set	0.002672	1786	0.01256	144	microRNA targets for hsa-miR-519b-3p from miranda.targets	www.mirbase.org...
Null hsa-miR-23b	View Gene Set	0.00284	1858	0.01326	145	microRNA targets for hsa-miR-23b from miranda.targets	www.mirbase.org...
Null hsa-miR-27a	View Gene Set	0.002941	1723	0.01361	146	microRNA targets for hsa-miR-27a from miranda.targets	www.mirbase.org...
Null hsa-miR-568	View Gene Set	0.002954	2065	0.01361	146	microRNA targets for hsa-miR-568 from miranda.targets	www.mirbase.org...
Null hsa-miR-365	View Gene Set	0.003216	788	0.01471	148	microRNA targets for hsa-miR-365 from miranda.targets	www.mirbase.org...
Null hsa-miR-452	View Gene Set	0.00328	1919	0.01481	149	microRNA targets for hsa-miR-452 from miranda.targets	www.mirbase.org...
Null hsa-miR-455-3p	View Gene Set	0.003274	1176	0.01481	149	microRNA targets for hsa-miR-455-3p from miranda.targets	www.mirbase.org...
Null hsa-miR-325	View Gene Set	0.003365	855	0.01499	151	microRNA targets for hsa-miR-325 from miranda.targets	www.mirbase.org...
Null hsa-miR-425	View Gene Set	0.003357	821	0.01499	151	microRNA targets for hsa-miR-425 from miranda.targets	www.mirbase.org...
Null hsa-miR-214	View Gene Set	0.003503	2160	0.0155	153	microRNA targets for hsa-miR-214 from miranda.targets	www.mirbase.org...
Null hsa-miR-15a	View Gene Set	0.003737	2301	0.01632	154	microRNA targets for hsa-miR-15a from miranda.targets	www.mirbase.org...
Null hsa-miR-555	View Gene Set	0.00372	705	0.01632	154	microRNA targets for hsa-miR-555 from miranda.targets	www.mirbase.org...
Null hsa-miR-485-3p	View Gene Set	0.003869	1229	0.01679	156	microRNA targets for hsa-miR-485-3p from miranda.targets	www.mirbase.org...
Null hsa-miR-181a	View Gene Set	0.003998	1946	0.01702	157	microRNA targets for hsa-miR-181a from miranda.targets	www.mirbase.org...
Null hsa-miR-224	View Gene Set	0.003978	1307	0.01702	157	microRNA targets for hsa-miR-224 from miranda.targets	www.mirbase.org...
Null hsa-miR-600	View Gene Set	0.003961	1431	0.01702	157	microRNA targets for hsa-miR-600 from miranda.targets	www.mirbase.org...
Null hsa-miR-143	View Gene Set	0.004148	1432	0.01755	160	microRNA targets for hsa-miR-143 from miranda.targets	www.mirbase.org...
Null hsa-miR-1281	View Gene Set	0.004249	505	0.01787	161	microRNA targets for hsa-miR-1281 from miranda.targets	www.mirbase.org...
Null hsa-miR-140-3p	View Gene Set	0.004342	1358	0.01807	162	microRNA targets for hsa-miR-140-3p from miranda.targets	www.mirbase.org...
Null hsa-miR-487a	View Gene Set	0.004352	865	0.01807	162	microRNA targets for hsa-miR-487a from miranda.targets	www.mirbase.org...
Null hsa-miR-520a-3p	View Gene Set	0.004667	1590	0.01926	164	microRNA targets for hsa-miR-520a-3p from miranda.targets	www.mirbase.org...
Null hsa-miR-135b	View Gene Set	0.00477	1979	0.0194	165	microRNA targets for hsa-miR-135b from miranda.targets	www.mirbase.org...
Null hsa-miR-337-3p	View Gene Set	0.004757	876	0.0194	165	microRNA targets for hsa-miR-337-3p from miranda.targets	www.mirbase.org...
Null hsa-miR-92b	View Gene Set	0.004787	934	0.0194	165	microRNA targets for hsa-miR-92b from miranda.targets	www.mirbase.org...
Null hsa-miR-1324	View Gene Set	0.004842	2051	0.01951	168	microRNA targets for hsa-miR-1324 from miranda.targets	www.mirbase.org...
Null hsa-miR-148a	View Gene Set	0.005185	1504	0.02077	169	microRNA targets for hsa-miR-148a from miranda.targets	www.mirbase.org...
Null hsa-miR-515-5p	View Gene Set	0.005219	1821	0.02078	170	microRNA targets for hsa-miR-515-5p from miranda.targets	www.mirbase.org...
Null hsa-miR-519d	View Gene Set	0.00551	1646	0.02182	171	microRNA targets for hsa-miR-519d from miranda.targets	www.mirbase.org...
Null hsa-miR-32	View Gene Set	0.005568	1319	0.02191	172	microRNA targets for hsa-miR-32 from miranda.targets	www.mirbase.org...
Null hsa-miR-297	View Gene Set	0.005748	1497	0.02249	173	microRNA targets for hsa-miR-297 from miranda.targets	www.mirbase.org...
Null hsa-miR-587	View Gene Set	0.005955	1524	0.02317	174	microRNA targets for hsa-miR-587 from miranda.targets	www.mirbase.org...
Null hsa-miR-1	View Gene Set	0.006062	1772	0.02345	175	microRNA targets for hsa-miR-1 from miranda.targets	www.mirbase.org...
Null hsa-miR-496	View Gene Set	0.006141	1044	0.02362	176	microRNA targets for hsa-miR-496 from miranda.targets	www.mirbase.org...
Null hsa-miR-520c-3p	View Gene Set	0.00655	1842	0.02491	177	microRNA targets for hsa-miR-520c-3p from miranda.targets	www.mirbase.org...
Null hsa-miR-7	View Gene Set	0.006536	1890	0.02491	177	microRNA targets for hsa-miR-7 from miranda.targets	www.mirbase.org...
Null hsa-miR-548b-3p	View Gene Set	0.006591	1349	0.02493	179	microRNA targets for hsa-miR-548b-3p from miranda.targets	www.mirbase.org...
Null hsa-miR-1259	View Gene Set	0.00677	1309	0.02546	180	microRNA targets for hsa-miR-1259 from miranda.targets	www.mirbase.org...
Null hsa-miR-342-3p	View Gene Set	0.006902	1057	0.02582	181	microRNA targets for hsa-miR-342-3p from miranda.targets	www.mirbase.org...
Null hsa-miR-372	View Gene Set	0.007453	1832	0.02772	182	microRNA targets for hsa-miR-372 from miranda.targets	www.mirbase.org...
Null hsa-miR-628-5p	View Gene Set	0.008144	1073	0.03013	183	microRNA targets for hsa-miR-628-5p from miranda.targets	www.mirbase.org...
Null hsa-miR-1234	View Gene Set	0.008445	510	0.03107	184	microRNA targets for hsa-miR-1234 from miranda.targets	www.mirbase.org...
Null hsa-miR-15b	View Gene Set	0.008532	2253	0.03116	185	microRNA targets for hsa-miR-15b from miranda.targets	www.mirbase.org...
Null hsa-miR-200a	View Gene Set	0.008607	1619	0.03116	185	microRNA targets for hsa-miR-200a from miranda.targets	www.mirbase.org...
Null hsa-miR-520e	View Gene Set	0.008602	1728	0.03116	185	microRNA targets for hsa-miR-520e from miranda.targets	www.mirbase.org...
Null hsa-miR-504	View Gene Set	0.00886	939	0.03191	188	microRNA targets for hsa-miR-504 from miranda.targets	www.mirbase.org...
Null hsa-miR-363	View Gene Set	0.009613	1039	0.03443	189	microRNA targets for hsa-miR-363 from miranda.targets	www.mirbase.org...
Null hsa-miR-361-5p	View Gene Set	0.01002	1236	0.0357	190	microRNA targets for hsa-miR-361-5p from miranda.targets	www.mirbase.org...
Null hsa-miR-25	View Gene Set	0.0102	1138	0.03614	191	microRNA targets for hsa-miR-25 from miranda.targets	www.mirbase.org...
Null hsa-miR-1305	View Gene Set	0.01108	1619	0.03888	192	microRNA targets for hsa-miR-1305 from miranda.targets	www.mirbase.org...
Null hsa-miR-589	View Gene Set	0.01105	873	0.03888	192	microRNA targets for hsa-miR-589 from miranda.targets	www.mirbase.org...
Null hsa-miR-205	View Gene Set	0.0113	1242	0.03943	194	microRNA targets for hsa-miR-205 from miranda.targets	www.mirbase.org...
Null hsa-miR-302e	View Gene Set	0.01144	1203	0.0395	195	microRNA targets for hsa-miR-302e from miranda.targets	www.mirbase.org...
Null hsa-miR-379	View Gene Set	0.01142	553	0.0395	195	microRNA targets for hsa-miR-379 from miranda.targets	www.mirbase.org...
Null hsa-miR-197	View Gene Set	0.01177	975	0.04026	197	microRNA targets for hsa-miR-197 from miranda.targets	www.mirbase.org...
Null hsa-miR-381	View Gene Set	0.01183	1638	0.04026	197	microRNA targets for hsa-miR-381 from miranda.targets	www.mirbase.org...
Null hsa-miR-450b-5p	View Gene Set	0.01181	2243	0.04026	197	microRNA targets for hsa-miR-450b-5p from miranda.targets	www.mirbase.org...
Null hsa-miR-497	View Gene Set	0.01189	2080	0.04026	200	microRNA targets for hsa-miR-497 from miranda.targets	www.mirbase.org...

Gene Set Collection: mirbase.targets

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null hsa-let-7b*	View Gene Set	9.085e-10	772	6.459e-07	1	microRNA targets for hsa-let-7b* from mirbase.targets	www.mirbase.org...
Null hsa-let-7a*	View Gene Set	7.06e-08	772	2.51e-05	2	microRNA targets for hsa-let-7a* from mirbase.targets	www.mirbase.org...
Null hsa-miR-561	View Gene Set	1.577e-07	651	3.737e-05	3	microRNA targets for hsa-miR-561 from mirbase.targets	www.mirbase.org...
Null hsa-miR-191	View Gene Set	1.126e-06	709	0.0002002	4	microRNA targets for hsa-miR-191 from mirbase.targets	www.mirbase.org...
Null hsa-let-7d*	View Gene Set	2.302e-06	781	0.0002312	5	microRNA targets for hsa-let-7d* from mirbase.targets	www.mirbase.org...
Null hsa-miR-200c	View Gene Set	2.315e-06	871	0.0002312	5	microRNA targets for hsa-miR-200c from mirbase.targets	www.mirbase.org...
Null hsa-miR-26a	View Gene Set	2.601e-06	718	0.0002312	5	microRNA targets for hsa-miR-26a from mirbase.targets	www.mirbase.org...
Null hsa-miR-590-5p	View Gene Set	2.355e-06	837	0.0002312	5	microRNA targets for hsa-miR-590-5p from mirbase.targets	www.mirbase.org...
Null hsa-miR-26b	View Gene Set	3.054e-06	696	0.0002412	9	microRNA targets for hsa-miR-26b from mirbase.targets	www.mirbase.org...
Null hsa-miR-582-3p	View Gene Set	3.97e-06	821	0.0002626	10	microRNA targets for hsa-miR-582-3p from mirbase.targets	www.mirbase.org...
Null hsa-miR-590-3p	View Gene Set	4.063e-06	742	0.0002626	10	microRNA targets for hsa-miR-590-3p from mirbase.targets	www.mirbase.org...
Null hsa-miR-21	View Gene Set	4.932e-06	724	0.0002738	12	microRNA targets for hsa-miR-21 from mirbase.targets	www.mirbase.org...
Null hsa-miR-616*	View Gene Set	5.006e-06	533	0.0002738	12	microRNA targets for hsa-miR-616* from mirbase.targets	www.mirbase.org...
Null hsa-let-7f-1*	View Gene Set	6.907e-06	751	0.0003508	14	microRNA targets for hsa-let-7f-1* from mirbase.targets	www.mirbase.org...
Null hsa-miR-216b	View Gene Set	1.241e-05	745	0.0005515	15	microRNA targets for hsa-miR-216b from mirbase.targets	www.mirbase.org...
Null hsa-miR-548c-3p	View Gene Set	1.213e-05	863	0.0005515	15	microRNA targets for hsa-miR-548c-3p from mirbase.targets	www.mirbase.org...
Null hsa-miR-891b	View Gene Set	1.666e-05	755	0.0006966	17	microRNA targets for hsa-miR-891b from mirbase.targets	www.mirbase.org...
Null hsa-miR-16	View Gene Set	2.303e-05	780	0.0008619	18	microRNA targets for hsa-miR-16 from mirbase.targets	www.mirbase.org...
Null hsa-miR-513-3p	View Gene Set	2.186e-05	704	0.0008619	18	microRNA targets for hsa-miR-513-3p from mirbase.targets	www.mirbase.org...
Null hsa-miR-19a	View Gene Set	2.657e-05	803	0.0009445	20	microRNA targets for hsa-miR-19a from mirbase.targets	www.mirbase.org...
Null hsa-miR-124	View Gene Set	2.875e-05	793	0.0009734	21	microRNA targets for hsa-miR-124 from mirbase.targets	www.mirbase.org...
Null hsa-miR-19b	View Gene Set	3.109e-05	789	0.001005	22	microRNA targets for hsa-miR-19b from mirbase.targets	www.mirbase.org...
Null hsa-miR-144	View Gene Set	3.643e-05	796	0.001126	23	microRNA targets for hsa-miR-144 from mirbase.targets	www.mirbase.org...
Null hsa-miR-101	View Gene Set	4.849e-05	818	0.001437	24	microRNA targets for hsa-miR-101 from mirbase.targets	www.mirbase.org...
Null hsa-miR-889	View Gene Set	5.711e-05	650	0.001624	25	microRNA targets for hsa-miR-889 from mirbase.targets	www.mirbase.org...
Null hsa-miR-302d*	View Gene Set	7.525e-05	693	0.001928	26	microRNA targets for hsa-miR-302d* from mirbase.targets	www.mirbase.org...
Null hsa-miR-548d-3p	View Gene Set	7.593e-05	978	0.001928	26	microRNA targets for hsa-miR-548d-3p from mirbase.targets	www.mirbase.org...
Null hsa-miR-641	View Gene Set	7.3e-05	629	0.001928	26	microRNA targets for hsa-miR-641 from mirbase.targets	www.mirbase.org...
Null hsa-let-7f-2*	View Gene Set	0.0001007	820	0.002387	29	microRNA targets for hsa-let-7f-2* from mirbase.targets	www.mirbase.org...
Null hsa-miR-16-1*	View Gene Set	0.0001006	557	0.002387	29	microRNA targets for hsa-miR-16-1* from mirbase.targets	www.mirbase.org...
Null hsa-miR-194	View Gene Set	0.0001104	731	0.002531	31	microRNA targets for hsa-miR-194 from mirbase.targets	www.mirbase.org...
Null hsa-miR-424	View Gene Set	0.0001178	772	0.002539	32	microRNA targets for hsa-miR-424 from mirbase.targets	www.mirbase.org...
Null hsa-miR-9*	View Gene Set	0.0001154	570	0.002539	32	microRNA targets for hsa-miR-9* from mirbase.targets	www.mirbase.org...
Null hsa-miR-361-5p	View Gene Set	0.0001348	677	0.002819	34	microRNA targets for hsa-miR-361-5p from mirbase.targets	www.mirbase.org...
Null hsa-miR-570	View Gene Set	0.0001649	603	0.003349	35	microRNA targets for hsa-miR-570 from mirbase.targets	www.mirbase.org...
Null hsa-miR-587	View Gene Set	0.0001725	739	0.003407	36	microRNA targets for hsa-miR-587 from mirbase.targets	www.mirbase.org...
Null hsa-miR-17	View Gene Set	0.0001861	935	0.003575	37	microRNA targets for hsa-miR-17 from mirbase.targets	www.mirbase.org...
Null hsa-miR-320	View Gene Set	0.0002291	771	0.004275	38	microRNA targets for hsa-miR-320 from mirbase.targets	www.mirbase.org...
Null hsa-miR-551b*	View Gene Set	0.0002405	473	0.004275	38	microRNA targets for hsa-miR-551b* from mirbase.targets	www.mirbase.org...
Null hsa-miR-888	View Gene Set	0.0002404	699	0.004275	38	microRNA targets for hsa-miR-888 from mirbase.targets	www.mirbase.org...
Null hsa-miR-146a*	View Gene Set	0.0002499	556	0.004333	41	microRNA targets for hsa-miR-146a* from mirbase.targets	www.mirbase.org...
Null hsa-miR-559	View Gene Set	0.0002599	463	0.0044	42	microRNA targets for hsa-miR-559 from mirbase.targets	www.mirbase.org...
Null hsa-miR-433	View Gene Set	0.0002736	731	0.004525	43	microRNA targets for hsa-miR-433 from mirbase.targets	www.mirbase.org...
Null hsa-miR-340	View Gene Set	0.0003239	581	0.005234	44	microRNA targets for hsa-miR-340 from mirbase.targets	www.mirbase.org...
Null hsa-miR-195	View Gene Set	0.0003477	714	0.005403	45	microRNA targets for hsa-miR-195 from mirbase.targets	www.mirbase.org...
Null hsa-miR-300	View Gene Set	0.0003495	672	0.005403	45	microRNA targets for hsa-miR-300 from mirbase.targets	www.mirbase.org...
Null hsa-miR-628-3p	View Gene Set	0.0003792	705	0.005736	47	microRNA targets for hsa-miR-628-3p from mirbase.targets	www.mirbase.org...
Null hsa-miR-520a-3p	View Gene Set	0.0004022	842	0.005958	48	microRNA targets for hsa-miR-520a-3p from mirbase.targets	www.mirbase.org...
Null hsa-miR-30c	View Gene Set	0.0005056	799	0.007267	49	microRNA targets for hsa-miR-30c from mirbase.targets	www.mirbase.org...
Null hsa-miR-548a-3p	View Gene Set	0.000511	899	0.007267	49	microRNA targets for hsa-miR-548a-3p from mirbase.targets	www.mirbase.org...
Null hsa-miR-142-5p	View Gene Set	0.000524	661	0.007305	51	microRNA targets for hsa-miR-142-5p from mirbase.targets	www.mirbase.org...
Null hsa-miR-106a	View Gene Set	0.0005473	774	0.007483	52	microRNA targets for hsa-miR-106a from mirbase.targets	www.mirbase.org...
Null hsa-miR-1	View Gene Set	0.0005936	659	0.007536	53	microRNA targets for hsa-miR-1 from mirbase.targets	www.mirbase.org...
Null hsa-miR-181c	View Gene Set	0.0005805	855	0.007536	53	microRNA targets for hsa-miR-181c from mirbase.targets	www.mirbase.org...
Null hsa-miR-187*	View Gene Set	0.0005909	557	0.007536	53	microRNA targets for hsa-miR-187* from mirbase.targets	www.mirbase.org...
Null hsa-miR-217	View Gene Set	0.0005834	665	0.007536	53	microRNA targets for hsa-miR-217 from mirbase.targets	www.mirbase.org...
Null hsa-miR-499-5p	View Gene Set	0.0006171	761	0.007698	57	microRNA targets for hsa-miR-499-5p from mirbase.targets	www.mirbase.org...
Null hsa-miR-522	View Gene Set	0.0006511	665	0.007982	58	microRNA targets for hsa-miR-522 from mirbase.targets	www.mirbase.org...
Null hsa-miR-103	View Gene Set	0.000718	750	0.008508	59	microRNA targets for hsa-miR-103 from mirbase.targets	www.mirbase.org...
Null hsa-miR-429	View Gene Set	0.000715	793	0.008508	59	microRNA targets for hsa-miR-429 from mirbase.targets	www.mirbase.org...
Null hsa-miR-200b	View Gene Set	0.0007679	854	0.008858	61	microRNA targets for hsa-miR-200b from mirbase.targets	www.mirbase.org...
Null hsa-miR-208b	View Gene Set	0.0007724	678	0.008858	61	microRNA targets for hsa-miR-208b from mirbase.targets	www.mirbase.org...
Null hsa-miR-455-3p	View Gene Set	0.0008104	824	0.009145	63	microRNA targets for hsa-miR-455-3p from mirbase.targets	www.mirbase.org...
Null hsa-miR-767-5p	View Gene Set	0.0008395	669	0.009326	64	microRNA targets for hsa-miR-767-5p from mirbase.targets	www.mirbase.org...
Null hsa-miR-183	View Gene Set	0.0009846	791	0.01061	65	microRNA targets for hsa-miR-183 from mirbase.targets	www.mirbase.org...
Null hsa-miR-30b	View Gene Set	0.0009769	807	0.01061	65	microRNA targets for hsa-miR-30b from mirbase.targets	www.mirbase.org...
Null hsa-miR-15a	View Gene Set	0.001051	817	0.01113	67	microRNA targets for hsa-miR-15a from mirbase.targets	www.mirbase.org...
Null hsa-miR-548b-3p	View Gene Set	0.00108	970	0.01113	67	microRNA targets for hsa-miR-548b-3p from mirbase.targets	www.mirbase.org...
Null hsa-miR-802	View Gene Set	0.001076	683	0.01113	67	microRNA targets for hsa-miR-802 from mirbase.targets	www.mirbase.org...
Null hsa-miR-128a	View Gene Set	0.001257	811	0.01177	70	microRNA targets for hsa-miR-128a from mirbase.targets	www.mirbase.org...
Null hsa-miR-136*	View Gene Set	0.001219	557	0.01177	70	microRNA targets for hsa-miR-136* from mirbase.targets	www.mirbase.org...
Null hsa-miR-15b	View Gene Set	0.001258	795	0.01177	70	microRNA targets for hsa-miR-15b from mirbase.targets	www.mirbase.org...
Null hsa-miR-208	View Gene Set	0.001229	664	0.01177	70	microRNA targets for hsa-miR-208 from mirbase.targets	www.mirbase.org...
Null hsa-miR-376b	View Gene Set	0.001198	779	0.01177	70	microRNA targets for hsa-miR-376b from mirbase.targets	www.mirbase.org...
Null hsa-miR-380	View Gene Set	0.001179	581	0.01177	70	microRNA targets for hsa-miR-380 from mirbase.targets	www.mirbase.org...
Null hsa-miR-454	View Gene Set	0.001224	769	0.01177	70	microRNA targets for hsa-miR-454 from mirbase.targets	www.mirbase.org...
Null hsa-miR-452	View Gene Set	0.001292	729	0.01178	77	microRNA targets for hsa-miR-452 from mirbase.targets	www.mirbase.org...
Null hsa-miR-548a-5p	View Gene Set	0.001292	763	0.01178	77	microRNA targets for hsa-miR-548a-5p from mirbase.targets	www.mirbase.org...
Null hsa-miR-146a	View Gene Set	0.001464	717	0.01294	79	microRNA targets for hsa-miR-146a from mirbase.targets	www.mirbase.org...
Null hsa-miR-150	View Gene Set	0.001474	595	0.01294	79	microRNA targets for hsa-miR-150 from mirbase.targets	www.mirbase.org...
Null hsa-miR-505	View Gene Set	0.001449	690	0.01294	79	microRNA targets for hsa-miR-505 from mirbase.targets	www.mirbase.org...
Null hsa-miR-518c	View Gene Set	0.001582	921	0.01371	82	microRNA targets for hsa-miR-518c from mirbase.targets	www.mirbase.org...
Null hsa-miR-568	View Gene Set	0.001682	649	0.0143	83	microRNA targets for hsa-miR-568 from mirbase.targets	www.mirbase.org...
Null hsa-miR-95	View Gene Set	0.00169	787	0.0143	83	microRNA targets for hsa-miR-95 from mirbase.targets	www.mirbase.org...
Null hsa-let-7e*	View Gene Set	0.001789	790	0.01496	85	microRNA targets for hsa-let-7e* from mirbase.targets	www.mirbase.org...
Null hsa-miR-138-2*	View Gene Set	0.001833	615	0.01504	86	microRNA targets for hsa-miR-138-2* from mirbase.targets	www.mirbase.org...
Null hsa-miR-30a*	View Gene Set	0.00184	726	0.01504	86	microRNA targets for hsa-miR-30a* from mirbase.targets	www.mirbase.org...
Null hsa-miR-520c-3p	View Gene Set	0.001874	848	0.01514	88	microRNA targets for hsa-miR-520c-3p from mirbase.targets	www.mirbase.org...
Null hsa-miR-338-5p	View Gene Set	0.002196	814	0.01754	89	microRNA targets for hsa-miR-338-5p from mirbase.targets	www.mirbase.org...
Null hsa-miR-630	View Gene Set	0.002292	702	0.01811	90	microRNA targets for hsa-miR-630 from mirbase.targets	www.mirbase.org...
Null hsa-miR-593*	View Gene Set	0.002339	504	0.01827	91	microRNA targets for hsa-miR-593* from mirbase.targets	www.mirbase.org...
Null hsa-miR-107	View Gene Set	0.002394	725	0.0183	92	microRNA targets for hsa-miR-107 from mirbase.targets	www.mirbase.org...
Null hsa-miR-495	View Gene Set	0.002369	796	0.0183	92	microRNA targets for hsa-miR-495 from mirbase.targets	www.mirbase.org...
Null hsa-miR-29a	View Gene Set	0.002454	828	0.01856	94	microRNA targets for hsa-miR-29a from mirbase.targets	www.mirbase.org...
Null hsa-miR-146b-5p	View Gene Set	0.002487	690	0.01861	95	microRNA targets for hsa-miR-146b-5p from mirbase.targets	www.mirbase.org...
Null hsa-miR-539	View Gene Set	0.002546	539	0.01886	96	microRNA targets for hsa-miR-539 from mirbase.targets	www.mirbase.org...
Null hsa-miR-105	View Gene Set	0.002738	719	0.02007	97	microRNA targets for hsa-miR-105 from mirbase.targets	www.mirbase.org...
Null hsa-miR-518f	View Gene Set	0.002862	948	0.02077	98	microRNA targets for hsa-miR-518f from mirbase.targets	www.mirbase.org...
Null hsa-miR-337-5p	View Gene Set	0.003077	795	0.02205	99	microRNA targets for hsa-miR-337-5p from mirbase.targets	www.mirbase.org...
Null hsa-miR-935	View Gene Set	0.003101	689	0.02205	99	microRNA targets for hsa-miR-935 from mirbase.targets	www.mirbase.org...
Null hsa-let-7i*	View Gene Set	0.003302	760	0.02296	101	microRNA targets for hsa-let-7i* from mirbase.targets	www.mirbase.org...
Null hsa-miR-381	View Gene Set	0.003326	643	0.02296	101	microRNA targets for hsa-miR-381 from mirbase.targets	www.mirbase.org...
Null hsa-miR-7-1*	View Gene Set	0.003307	524	0.02296	101	microRNA targets for hsa-miR-7-1* from mirbase.targets	www.mirbase.org...
Null hsa-miR-302b*	View Gene Set	0.003534	683	0.02389	104	microRNA targets for hsa-miR-302b* from mirbase.targets	www.mirbase.org...
Null hsa-miR-558	View Gene Set	0.003562	618	0.02389	104	microRNA targets for hsa-miR-558 from mirbase.targets	www.mirbase.org...
Null hsa-miR-7-2*	View Gene Set	0.003528	531	0.02389	104	microRNA targets for hsa-miR-7-2* from mirbase.targets	www.mirbase.org...
Null hsa-miR-144*	View Gene Set	0.003598	446	0.02391	107	microRNA targets for hsa-miR-144* from mirbase.targets	www.mirbase.org...
Null hsa-miR-887	View Gene Set	0.004005	709	0.02636	108	microRNA targets for hsa-miR-887 from mirbase.targets	www.mirbase.org...
Null hsa-miR-377	View Gene Set	0.004046	736	0.02639	109	microRNA targets for hsa-miR-377 from mirbase.targets	www.mirbase.org...
Null hsa-miR-518e	View Gene Set	0.004102	923	0.02651	110	microRNA targets for hsa-miR-518e from mirbase.targets	www.mirbase.org...
Null hsa-miR-199a-3p	View Gene Set	0.004224	789	0.02706	111	microRNA targets for hsa-miR-199a-3p from mirbase.targets	www.mirbase.org...
Null hsa-miR-106b	View Gene Set	0.004369	872	0.02718	112	microRNA targets for hsa-miR-106b from mirbase.targets	www.mirbase.org...
Null hsa-miR-524-5p	View Gene Set	0.004397	708	0.02718	112	microRNA targets for hsa-miR-524-5p from mirbase.targets	www.mirbase.org...
Null hsa-miR-548c-5p	View Gene Set	0.004385	801	0.02718	112	microRNA targets for hsa-miR-548c-5p from mirbase.targets	www.mirbase.org...
Null hsa-miR-93	View Gene Set	0.004328	897	0.02718	112	microRNA targets for hsa-miR-93 from mirbase.targets	www.mirbase.org...
Null hsa-miR-101*	View Gene Set	0.004561	605	0.02796	116	microRNA targets for hsa-miR-101* from mirbase.targets	www.mirbase.org...
Null hsa-miR-373	View Gene Set	0.004675	677	0.02828	117	microRNA targets for hsa-miR-373 from mirbase.targets	www.mirbase.org...
Null hsa-miR-768-3p	View Gene Set	0.004694	770	0.02828	117	microRNA targets for hsa-miR-768-3p from mirbase.targets	www.mirbase.org...
Null hsa-miR-545	View Gene Set	0.004762	761	0.02845	119	microRNA targets for hsa-miR-545 from mirbase.targets	www.mirbase.org...
Null hsa-miR-871	View Gene Set	0.004887	707	0.02896	120	microRNA targets for hsa-miR-871 from mirbase.targets	www.mirbase.org...
Null hsa-miR-142-3p	View Gene Set	0.005148	756	0.03	121	microRNA targets for hsa-miR-142-3p from mirbase.targets	www.mirbase.org...
Null hsa-miR-497*	View Gene Set	0.005122	628	0.03	121	microRNA targets for hsa-miR-497* from mirbase.targets	www.mirbase.org...
Null hsa-miR-216a	View Gene Set	0.005224	680	0.03002	123	microRNA targets for hsa-miR-216a from mirbase.targets	www.mirbase.org...
Null hsa-miR-656	View Gene Set	0.005235	514	0.03002	123	microRNA targets for hsa-miR-656 from mirbase.targets	www.mirbase.org...
Null hsa-miR-655	View Gene Set	0.005522	654	0.03141	125	microRNA targets for hsa-miR-655 from mirbase.targets	www.mirbase.org...
Null hsa-miR-409-3p	View Gene Set	0.005689	654	0.0321	126	microRNA targets for hsa-miR-409-3p from mirbase.targets	www.mirbase.org...
Null hsa-miR-34b	View Gene Set	0.005787	776	0.0324	127	microRNA targets for hsa-miR-34b from mirbase.targets	www.mirbase.org...
Null hsa-miR-29b	View Gene Set	0.005865	848	0.03258	128	microRNA targets for hsa-miR-29b from mirbase.targets	www.mirbase.org...
Null hsa-miR-181c*	View Gene Set	0.00596	691	0.03285	129	microRNA targets for hsa-miR-181c* from mirbase.targets	www.mirbase.org...
Null hsa-miR-29c	View Gene Set	0.006196	867	0.03389	130	microRNA targets for hsa-miR-29c from mirbase.targets	www.mirbase.org...
Null hsa-miR-203	View Gene Set	0.0063	628	0.0342	131	microRNA targets for hsa-miR-203 from mirbase.targets	www.mirbase.org...
Null hsa-miR-362-3p	View Gene Set	0.006605	760	0.03504	132	microRNA targets for hsa-miR-362-3p from mirbase.targets	www.mirbase.org...
Null hsa-miR-520b	View Gene Set	0.006527	833	0.03504	132	microRNA targets for hsa-miR-520b from mirbase.targets	www.mirbase.org...
Null hsa-miR-633	View Gene Set	0.00657	568	0.03504	132	microRNA targets for hsa-miR-633 from mirbase.targets	www.mirbase.org...
Null hsa-miR-30d	View Gene Set	0.006867	770	0.03616	135	microRNA targets for hsa-miR-30d from mirbase.targets	www.mirbase.org...
Null hsa-miR-497	View Gene Set	0.007099	805	0.03711	136	microRNA targets for hsa-miR-497 from mirbase.targets	www.mirbase.org...
Null hsa-miR-516a-5p	View Gene Set	0.007398	788	0.0384	137	microRNA targets for hsa-miR-516a-5p from mirbase.targets	www.mirbase.org...
Null hsa-miR-20b	View Gene Set	0.007505	901	0.03867	138	microRNA targets for hsa-miR-20b from mirbase.targets	www.mirbase.org...
Null hsa-miR-549	View Gene Set	0.007764	718	0.03971	139	microRNA targets for hsa-miR-549 from mirbase.targets	www.mirbase.org...
Null hsa-miR-553	View Gene Set	0.007854	672	0.03973	140	microRNA targets for hsa-miR-553 from mirbase.targets	www.mirbase.org...
Null hsa-miR-583	View Gene Set	0.007879	632	0.03973	140	microRNA targets for hsa-miR-583 from mirbase.targets	www.mirbase.org...
Null hsa-miR-15b*	View Gene Set	0.007977	587	0.03994	142	microRNA targets for hsa-miR-15b* from mirbase.targets	www.mirbase.org...
Null hsa-miR-30a	View Gene Set	0.008045	767	0.04	143	microRNA targets for hsa-miR-30a from mirbase.targets	www.mirbase.org...
Null hsa-miR-545*	View Gene Set	0.008116	518	0.04007	144	microRNA targets for hsa-miR-545* from mirbase.targets	www.mirbase.org...
Null hsa-miR-372	View Gene Set	0.008244	614	0.04015	145	microRNA targets for hsa-miR-372 from mirbase.targets	www.mirbase.org...
Null hsa-miR-525-3p	View Gene Set	0.008204	790	0.04015	145	microRNA targets for hsa-miR-525-3p from mirbase.targets	www.mirbase.org...
Null hsa-miR-15a*	View Gene Set	0.008419	554	0.04032	147	microRNA targets for hsa-miR-15a* from mirbase.targets	www.mirbase.org...
Null hsa-miR-181d	View Gene Set	0.00845	864	0.04032	147	microRNA targets for hsa-miR-181d from mirbase.targets	www.mirbase.org...
Null hsa-miR-512-3p	View Gene Set	0.008429	697	0.04032	147	microRNA targets for hsa-miR-512-3p from mirbase.targets	www.mirbase.org...
Null hsa-miR-498	View Gene Set	0.008564	744	0.0405	150	microRNA targets for hsa-miR-498 from mirbase.targets	www.mirbase.org...
Null hsa-miR-499-3p	View Gene Set	0.008602	718	0.0405	150	microRNA targets for hsa-miR-499-3p from mirbase.targets	www.mirbase.org...
Null hsa-miR-132	View Gene Set	0.009033	810	0.04175	152	microRNA targets for hsa-miR-132 from mirbase.targets	www.mirbase.org...
Null hsa-miR-421	View Gene Set	0.009043	765	0.04175	152	microRNA targets for hsa-miR-421 from mirbase.targets	www.mirbase.org...
Null hsa-miR-506	View Gene Set	0.009025	802	0.04175	152	microRNA targets for hsa-miR-506 from mirbase.targets	www.mirbase.org...
Null hsa-miR-19a*	View Gene Set	0.009755	536	0.04449	155	microRNA targets for hsa-miR-19a* from mirbase.targets	www.mirbase.org...
Null hsa-miR-27b	View Gene Set	0.009762	789	0.04449	155	microRNA targets for hsa-miR-27b from mirbase.targets	www.mirbase.org...
Null hsa-miR-371-5p	View Gene Set	0.009982	779	0.04521	157	microRNA targets for hsa-miR-371-5p from mirbase.targets	www.mirbase.org...
Null hsa-miR-337-3p	View Gene Set	0.01011	726	0.04548	158	microRNA targets for hsa-miR-337-3p from mirbase.targets	www.mirbase.org...
Null hsa-miR-548d-5p	View Gene Set	0.01022	795	0.04571	159	microRNA targets for hsa-miR-548d-5p from mirbase.targets	www.mirbase.org...
Null hsa-miR-220	View Gene Set	0.01029	748	0.04575	160	microRNA targets for hsa-miR-220 from mirbase.targets	www.mirbase.org...
Null hsa-miR-224	View Gene Set	0.01089	726	0.04808	161	microRNA targets for hsa-miR-224 from mirbase.targets	www.mirbase.org...
Null hsa-miR-212	View Gene Set	0.01113	803	0.04884	162	microRNA targets for hsa-miR-212 from mirbase.targets	www.mirbase.org...
Null hsa-miR-518b	View Gene Set	0.0112	883	0.04884	162	microRNA targets for hsa-miR-518b from mirbase.targets	www.mirbase.org...
Null hsa-miR-548b-5p	View Gene Set	0.01141	818	0.04947	164	microRNA targets for hsa-miR-548b-5p from mirbase.targets	www.mirbase.org...
Null hsa-miR-550*	View Gene Set	0.0116	463	0.04997	165	microRNA targets for hsa-miR-550* from mirbase.targets	www.mirbase.org...

Gene Set Collection: mirtarget2.targets

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null hsa-miR-590-3p	View Gene Set	1.783e-09	2046	9.862e-07	1	microRNA targets for hsa-miR-590-3p from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-548d-3p	View Gene Set	2.373e-07	1107	6.56e-05	2	microRNA targets for hsa-miR-548d-3p from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-607	View Gene Set	1.738e-06	1137	0.0003204	3	microRNA targets for hsa-miR-607 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-124	View Gene Set	3.56e-06	432	0.0003937	4	microRNA targets for hsa-miR-124 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-548c-3p	View Gene Set	3.166e-06	1804	0.0003937	4	microRNA targets for hsa-miR-548c-3p from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-106b	View Gene Set	8.096e-06	736	0.0007462	6	microRNA targets for hsa-miR-106b from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-561	View Gene Set	1.09e-05	1193	0.0008608	7	microRNA targets for hsa-miR-561 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-548b-5p	View Gene Set	2.129e-05	1157	0.001308	8	microRNA targets for hsa-miR-548b-5p from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-548d-5p	View Gene Set	2.003e-05	1147	0.001308	8	microRNA targets for hsa-miR-548d-5p from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-20a	View Gene Set	2.453e-05	754	0.001356	10	microRNA targets for hsa-miR-20a from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-548c-5p	View Gene Set	2.987e-05	1151	0.001502	11	microRNA targets for hsa-miR-548c-5p from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-522	View Gene Set	3.484e-05	618	0.001605	12	microRNA targets for hsa-miR-522 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-26a	View Gene Set	5.283e-05	498	0.002247	13	microRNA targets for hsa-miR-26a from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-559	View Gene Set	5.757e-05	977	0.002274	14	microRNA targets for hsa-miR-559 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-26b	View Gene Set	6.201e-05	493	0.002286	15	microRNA targets for hsa-miR-26b from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-515-5p	View Gene Set	6.903e-05	396	0.002386	16	microRNA targets for hsa-miR-515-5p from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-548a-5p	View Gene Set	8.009e-05	1120	0.002605	17	microRNA targets for hsa-miR-548a-5p from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-106a	View Gene Set	0.0001256	781	0.003857	18	microRNA targets for hsa-miR-106a from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-606	View Gene Set	0.0001713	282	0.004986	19	microRNA targets for hsa-miR-606 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-506	View Gene Set	0.000186	439	0.005143	20	microRNA targets for hsa-miR-506 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-543	View Gene Set	0.0002225	710	0.005592	21	microRNA targets for hsa-miR-543 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-655	View Gene Set	0.0002201	820	0.005592	21	microRNA targets for hsa-miR-655 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-19b	View Gene Set	0.0002673	536	0.006427	23	microRNA targets for hsa-miR-19b from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-587	View Gene Set	0.0002792	590	0.006433	24	microRNA targets for hsa-miR-587 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-186	View Gene Set	0.0003455	1020	0.007349	25	microRNA targets for hsa-miR-186 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-519d	View Gene Set	0.000345	714	0.007349	25	microRNA targets for hsa-miR-519d from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-570	View Gene Set	0.0003926	983	0.008042	27	microRNA targets for hsa-miR-570 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-548a-3p	View Gene Set	0.0004294	900	0.008188	28	microRNA targets for hsa-miR-548a-3p from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-93	View Gene Set	0.0004209	775	0.008188	28	microRNA targets for hsa-miR-93 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-105	View Gene Set	0.0005302	524	0.009418	30	microRNA targets for hsa-miR-105 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-19a	View Gene Set	0.0005542	539	0.009418	30	microRNA targets for hsa-miR-19a from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-205	View Gene Set	0.000562	348	0.009418	30	microRNA targets for hsa-miR-205 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-494	View Gene Set	0.0005578	696	0.009418	30	microRNA targets for hsa-miR-494 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-330-3p	View Gene Set	0.0005829	682	0.00948	34	microRNA targets for hsa-miR-330-3p from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-455-5p	View Gene Set	0.0007664	126	0.01199	35	microRNA targets for hsa-miR-455-5p from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-935	View Gene Set	0.0007804	283	0.01199	35	microRNA targets for hsa-miR-935 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-203	View Gene Set	0.0009427	754	0.01378	37	microRNA targets for hsa-miR-203 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-549	View Gene Set	0.0009649	200	0.01378	37	microRNA targets for hsa-miR-549 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-888	View Gene Set	0.000992	450	0.01378	37	microRNA targets for hsa-miR-888 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-891b	View Gene Set	0.0009967	245	0.01378	37	microRNA targets for hsa-miR-891b from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-17	View Gene Set	0.001138	784	0.01463	41	microRNA targets for hsa-miR-17 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-20b	View Gene Set	0.001129	795	0.01463	41	microRNA targets for hsa-miR-20b from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-633	View Gene Set	0.001117	303	0.01463	41	microRNA targets for hsa-miR-633 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-873	View Gene Set	0.001229	273	0.0151	44	microRNA targets for hsa-miR-873 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-9	View Gene Set	0.001206	423	0.0151	44	microRNA targets for hsa-miR-9 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-362-3p	View Gene Set	0.001402	270	0.01686	46	microRNA targets for hsa-miR-362-3p from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-188-5p	View Gene Set	0.001645	265	0.01936	47	microRNA targets for hsa-miR-188-5p from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-384	View Gene Set	0.001733	251	0.01997	48	microRNA targets for hsa-miR-384 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-938	View Gene Set	0.00179	97	0.02021	49	microRNA targets for hsa-miR-938 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-656	View Gene Set	0.002151	876	0.02379	50	microRNA targets for hsa-miR-656 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-524-5p	View Gene Set	0.002258	862	0.02448	51	microRNA targets for hsa-miR-524-5p from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-200b	View Gene Set	0.002436	671	0.02528	52	microRNA targets for hsa-miR-200b from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-454	View Gene Set	0.002514	442	0.02528	52	microRNA targets for hsa-miR-454 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-518a-5p	View Gene Set	0.002479	455	0.02528	52	microRNA targets for hsa-miR-518a-5p from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-527	View Gene Set	0.002479	455	0.02528	52	microRNA targets for hsa-miR-527 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-582-5p	View Gene Set	0.002588	526	0.02555	56	microRNA targets for hsa-miR-582-5p from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-579	View Gene Set	0.002649	625	0.0257	57	microRNA targets for hsa-miR-579 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-130a	View Gene Set	0.003272	440	0.02985	58	microRNA targets for hsa-miR-130a from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-30d	View Gene Set	0.003377	694	0.02985	58	microRNA targets for hsa-miR-30d from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-500	View Gene Set	0.003401	378	0.02985	58	microRNA targets for hsa-miR-500 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-545	View Gene Set	0.00329	600	0.02985	58	microRNA targets for hsa-miR-545 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-609	View Gene Set	0.003354	85	0.02985	58	microRNA targets for hsa-miR-609 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-640	View Gene Set	0.003336	166	0.02985	58	microRNA targets for hsa-miR-640 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-519b-3p	View Gene Set	0.003626	484	0.03133	64	microRNA targets for hsa-miR-519b-3p from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-519a	View Gene Set	0.003947	486	0.03307	65	microRNA targets for hsa-miR-519a from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-871	View Gene Set	0.003923	570	0.03307	65	microRNA targets for hsa-miR-871 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-544	View Gene Set	0.004038	484	0.03333	67	microRNA targets for hsa-miR-544 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-30e	View Gene Set	0.004284	693	0.03468	68	microRNA targets for hsa-miR-30e from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-373	View Gene Set	0.004381	404	0.03468	68	microRNA targets for hsa-miR-373 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-520d-5p	View Gene Set	0.00439	826	0.03468	68	microRNA targets for hsa-miR-520d-5p from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-132	View Gene Set	0.00478	296	0.03495	71	microRNA targets for hsa-miR-132 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-135a	View Gene Set	0.004803	301	0.03495	71	microRNA targets for hsa-miR-135a from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-212	View Gene Set	0.004763	314	0.03495	71	microRNA targets for hsa-miR-212 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-23b	View Gene Set	0.004726	875	0.03495	71	microRNA targets for hsa-miR-23b from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-301a	View Gene Set	0.004673	448	0.03495	71	microRNA targets for hsa-miR-301a from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-372	View Gene Set	0.004746	435	0.03495	71	microRNA targets for hsa-miR-372 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-200c	View Gene Set	0.005232	668	0.03758	77	microRNA targets for hsa-miR-200c from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-520e	View Gene Set	0.005434	443	0.03853	78	microRNA targets for hsa-miR-520e from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-135b	View Gene Set	0.00579	296	0.03986	79	microRNA targets for hsa-miR-135b from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-381	View Gene Set	0.005911	544	0.03986	79	microRNA targets for hsa-miR-381 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-513-3p	View Gene Set	0.005782	1119	0.03986	79	microRNA targets for hsa-miR-513-3p from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-588	View Gene Set	0.005866	184	0.03986	79	microRNA targets for hsa-miR-588 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-23a	View Gene Set	0.006252	858	0.0402	83	microRNA targets for hsa-miR-23a from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-431	View Gene Set	0.006166	137	0.0402	83	microRNA targets for hsa-miR-431 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-499-5p	View Gene Set	0.0062	307	0.0402	83	microRNA targets for hsa-miR-499-5p from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-520c-3p	View Gene Set	0.006063	452	0.0402	83	microRNA targets for hsa-miR-520c-3p from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-29b	View Gene Set	0.006625	335	0.04116	87	microRNA targets for hsa-miR-29b from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-519c-3p	View Gene Set	0.006495	493	0.04116	87	microRNA targets for hsa-miR-519c-3p from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-520b	View Gene Set	0.00661	451	0.04116	87	microRNA targets for hsa-miR-520b from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-101	View Gene Set	0.007274	433	0.04279	90	microRNA targets for hsa-miR-101 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-30a	View Gene Set	0.007218	680	0.04279	90	microRNA targets for hsa-miR-30a from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-429	View Gene Set	0.007261	640	0.04279	90	microRNA targets for hsa-miR-429 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-490-3p	View Gene Set	0.006989	124	0.04279	90	microRNA targets for hsa-miR-490-3p from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-646	View Gene Set	0.007226	365	0.04279	90	microRNA targets for hsa-miR-646 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-153	View Gene Set	0.007697	227	0.04281	95	microRNA targets for hsa-miR-153 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-199a-3p	View Gene Set	0.007626	262	0.04281	95	microRNA targets for hsa-miR-199a-3p from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-199b-3p	View Gene Set	0.007626	262	0.04281	95	microRNA targets for hsa-miR-199b-3p from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-300	View Gene Set	0.007742	528	0.04281	95	microRNA targets for hsa-miR-300 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-367	View Gene Set	0.007493	388	0.04281	95	microRNA targets for hsa-miR-367 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-641	View Gene Set	0.007467	659	0.04281	95	microRNA targets for hsa-miR-641 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-130b	View Gene Set	0.007889	445	0.0432	101	microRNA targets for hsa-miR-130b from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-520d-3p	View Gene Set	0.008101	456	0.04392	102	microRNA targets for hsa-miR-520d-3p from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-329	View Gene Set	0.008258	242	0.04434	103	microRNA targets for hsa-miR-329 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-548b-3p	View Gene Set	0.00865	264	0.04556	104	microRNA targets for hsa-miR-548b-3p from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-671-3p	View Gene Set	0.008623	13	0.04556	104	microRNA targets for hsa-miR-671-3p from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-337-3p	View Gene Set	0.009358	231	0.04882	106	microRNA targets for hsa-miR-337-3p from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-379	View Gene Set	0.009753	68	0.04994	107	microRNA targets for hsa-miR-379 from mirtarget2.targets	www.mirbase.org...
Null hsa-miR-577	View Gene Set	0.009677	731	0.04994	107	microRNA targets for hsa-miR-577 from mirtarget2.targets	www.mirbase.org...

Gene Set Collection: pictar.targets

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: tarbase.targets

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: targetscan.targets

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: miRNAtargetIntersection

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: miRNAtargetUnion

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null hsa-miR-124a	View Gene Set	1.4e-07	624	2.493e-05	1	microRNA targets for hsa-miR-124a from pictar.targets	www.mirbase.org...
Null hsa-miR-9*	View Gene Set	1.037e-05	306	0.0009233	2	microRNA targets for hsa-miR-9* from pictar.targets	www.mirbase.org...
Null hsa-miR-92	View Gene Set	5.351e-05	438	0.003175	3	microRNA targets for hsa-miR-92 from pictar.targets	www.mirbase.org...
Null hsa-miR-32	View Gene Set	8.675e-05	444	0.003489	4	microRNA targets for hsa-miR-32 from pictar.targets	www.mirbase.org...
Null hsa-miR-9	View Gene Set	9.8e-05	670	0.003489	4	microRNA targets for hsa-miR-9 from pictar.targets	www.mirbase.org...
Null hsa-miR-26a	View Gene Set	0.0001526	501	0.004528	6	microRNA targets for hsa-miR-26a from pictar.targets	www.mirbase.org...
Null hsa-miR-20b	View Gene Set	0.0002617	601	0.005822	7	microRNA targets for hsa-miR-20b from pictar.targets	www.mirbase.org...
Null hsa-miR-26b	View Gene Set	0.0002568	508	0.005822	7	microRNA targets for hsa-miR-26b from pictar.targets	www.mirbase.org...
Null hsa-miR-17-5p	View Gene Set	0.0003306	602	0.006539	9	microRNA targets for hsa-miR-17-5p from pictar.targets	www.mirbase.org...
Null hsa-miR-106b	View Gene Set	0.000514	613	0.008327	10	microRNA targets for hsa-miR-106b from pictar.targets	www.mirbase.org...
Null hsa-miR-153	View Gene Set	0.0005146	376	0.008327	10	microRNA targets for hsa-miR-153 from pictar.targets	www.mirbase.org...
Null hsa-miR-30a-3p	View Gene Set	0.0005632	230	0.008355	12	microRNA targets for hsa-miR-30a-3p from pictar.targets	www.mirbase.org...
Null hsa-miR-19a	View Gene Set	0.001097	562	0.009407	13	microRNA targets for hsa-miR-19a from pictar.targets	www.mirbase.org...
Null hsa-miR-19b	View Gene Set	0.001003	558	0.009407	13	microRNA targets for hsa-miR-19b from pictar.targets	www.mirbase.org...
Null hsa-miR-205	View Gene Set	0.001057	237	0.009407	13	microRNA targets for hsa-miR-205 from pictar.targets	www.mirbase.org...
Null hsa-miR-20a	View Gene Set	0.0008742	611	0.009407	13	microRNA targets for hsa-miR-20a from pictar.targets	www.mirbase.org...
Null hsa-miR-25	View Gene Set	0.001054	311	0.009407	13	microRNA targets for hsa-miR-25 from pictar.targets	www.mirbase.org...
Null hsa-miR-27a	View Gene Set	0.0009904	620	0.009407	13	microRNA targets for hsa-miR-27a from pictar.targets	www.mirbase.org...
Null hsa-miR-27b	View Gene Set	0.0008297	629	0.009407	13	microRNA targets for hsa-miR-27b from pictar.targets	www.mirbase.org...
Null hsa-miR-320	View Gene Set	0.00111	405	0.009407	13	microRNA targets for hsa-miR-320 from pictar.targets	www.mirbase.org...
Null hsa-miR-372	View Gene Set	0.000986	608	0.009407	13	microRNA targets for hsa-miR-372 from pictar.targets	www.mirbase.org...
Null hsa-miR-30e-3p	View Gene Set	0.001294	230	0.01047	22	microRNA targets for hsa-miR-30e-3p from pictar.targets	www.mirbase.org...
Null hsa-miR-93	View Gene Set	0.00147	606	0.01137	23	microRNA targets for hsa-miR-93 from pictar.targets	www.mirbase.org...
Null hsa-miR-34c	View Gene Set	0.001908	349	0.01415	24	microRNA targets for hsa-miR-34c from pictar.targets	www.mirbase.org...
Null hsa-miR-1	View Gene Set	0.002274	408	0.01619	25	microRNA targets for hsa-miR-1 from pictar.targets	www.mirbase.org...
Null hsa-miR-133b	View Gene Set	0.003738	337	0.02464	26	microRNA targets for hsa-miR-133b from pictar.targets	www.mirbase.org...
Null hsa-miR-222	View Gene Set	0.00367	218	0.02464	26	microRNA targets for hsa-miR-222 from pictar.targets	www.mirbase.org...
Null hsa-miR-133a	View Gene Set	0.004166	324	0.02648	28	microRNA targets for hsa-miR-133a from pictar.targets	www.mirbase.org...
Null hsa-miR-34a	View Gene Set	0.004773	365	0.0293	29	microRNA targets for hsa-miR-34a from pictar.targets	www.mirbase.org...
Null hsa-miR-139	View Gene Set	0.005121	223	0.02944	30	microRNA targets for hsa-miR-139 from pictar.targets	www.mirbase.org...
Null hsa-miR-141	View Gene Set	0.005127	332	0.02944	30	microRNA targets for hsa-miR-141 from pictar.targets	www.mirbase.org...
Null hsa-miR-200b	View Gene Set	0.007017	465	0.0374	32	microRNA targets for hsa-miR-200b from pictar.targets	www.mirbase.org...
Null hsa-miR-200c	View Gene Set	0.007017	465	0.0374	32	microRNA targets for hsa-miR-200c from pictar.targets	www.mirbase.org...
Null hsa-miR-206	View Gene Set	0.007144	404	0.0374	32	microRNA targets for hsa-miR-206 from pictar.targets	www.mirbase.org...
Null hsa-miR-301	View Gene Set	0.007887	492	0.03916	35	microRNA targets for hsa-miR-301 from pictar.targets	www.mirbase.org...
Null hsa-miR-302a	View Gene Set	0.007921	374	0.03916	35	microRNA targets for hsa-miR-302a from pictar.targets	www.mirbase.org...
Null hsa-miR-130b	View Gene Set	0.008787	497	0.04011	37	microRNA targets for hsa-miR-130b from pictar.targets	www.mirbase.org...
Null hsa-miR-302d	View Gene Set	0.008743	375	0.04011	37	microRNA targets for hsa-miR-302d from pictar.targets	www.mirbase.org...
Null hsa-miR-367	View Gene Set	0.008755	335	0.04011	37	microRNA targets for hsa-miR-367 from pictar.targets	www.mirbase.org...
Null hsa-miR-130a	View Gene Set	0.01223	517	0.04894	40	microRNA targets for hsa-miR-130a from pictar.targets	www.mirbase.org...
Null hsa-miR-181a	View Gene Set	0.01208	500	0.04894	40	microRNA targets for hsa-miR-181a from pictar.targets	www.mirbase.org...
Null hsa-miR-181b	View Gene Set	0.0121	500	0.04894	40	microRNA targets for hsa-miR-181b from pictar.targets	www.mirbase.org...
Null hsa-miR-181c	View Gene Set	0.01208	499	0.04894	40	microRNA targets for hsa-miR-181c from pictar.targets	www.mirbase.org...
Null hsa-miR-182	View Gene Set	0.01146	552	0.04894	40	microRNA targets for hsa-miR-182 from pictar.targets	www.mirbase.org...
Null hsa-miR-221	View Gene Set	0.01237	225	0.04894	40	microRNA targets for hsa-miR-221 from pictar.targets	www.mirbase.org...
Null hsa-miR-135a	View Gene Set	0.0137	358	0.04978	46	microRNA targets for hsa-miR-135a from pictar.targets	www.mirbase.org...
Null hsa-miR-142-5p	View Gene Set	0.01319	308	0.04978	46	microRNA targets for hsa-miR-142-5p from pictar.targets	www.mirbase.org...
Null hsa-miR-148b	View Gene Set	0.01342	341	0.04978	46	microRNA targets for hsa-miR-148b from pictar.targets	www.mirbase.org...
Null hsa-miR-302c	View Gene Set	0.01331	355	0.04978	46	microRNA targets for hsa-miR-302c from pictar.targets	www.mirbase.org...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null hsa-let-7b	View Gene Set	1.182e-06	83	6.027e-05	1	microRNA targets for hsa-let-7b from tarbase.targets	www.mirbase.org...
Null hsa-miR-124	View Gene Set	2.267e-05	133	0.000578	2	microRNA targets for hsa-miR-124 from tarbase.targets	www.mirbase.org...
Null hsa-miR-1	View Gene Set	0.0002721	149	0.004626	3	microRNA targets for hsa-miR-1 from tarbase.targets	www.mirbase.org...
Null hsa-miR-373	View Gene Set	0.0006933	40	0.00884	4	microRNA targets for hsa-miR-373 from tarbase.targets	www.mirbase.org...
Null hsa-miR-30	View Gene Set	0.002208	83	0.02252	5	microRNA targets for hsa-miR-30 from tarbase.targets	www.mirbase.org...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null hsa-miR-124	View Gene Set	6.843e-08	1299	8.348e-06	1	microRNA targets for hsa-miR-124 from targetscan.targets	www.mirbase.org...
Null hsa-miR-506	View Gene Set	6.843e-08	1299	8.348e-06	1	microRNA targets for hsa-miR-506 from targetscan.targets	www.mirbase.org...
Null hsa-miR-1297	View Gene Set	9.703e-06	646	0.0004735	3	microRNA targets for hsa-miR-1297 from targetscan.targets	www.mirbase.org...
Null hsa-miR-26a	View Gene Set	9.703e-06	646	0.0004735	3	microRNA targets for hsa-miR-26a from targetscan.targets	www.mirbase.org...
Null hsa-miR-26b	View Gene Set	9.703e-06	646	0.0004735	3	microRNA targets for hsa-miR-26b from targetscan.targets	www.mirbase.org...
Null hsa-miR-140-5p	View Gene Set	0.0003042	251	0.01237	6	microRNA targets for hsa-miR-140-5p from targetscan.targets	www.mirbase.org...
Null hsa-miR-490-3p	View Gene Set	0.0006035	105	0.02104	7	microRNA targets for hsa-miR-490-3p from targetscan.targets	www.mirbase.org...
Null hsa-miR-1	View Gene Set	0.001279	583	0.02117	8	microRNA targets for hsa-miR-1 from targetscan.targets	www.mirbase.org...
Null hsa-miR-206	View Gene Set	0.001279	583	0.02117	8	microRNA targets for hsa-miR-206 from targetscan.targets	www.mirbase.org...
Null hsa-miR-30a	View Gene Set	0.001388	1080	0.02117	8	microRNA targets for hsa-miR-30a from targetscan.targets	www.mirbase.org...
Null hsa-miR-30b	View Gene Set	0.001388	1080	0.02117	8	microRNA targets for hsa-miR-30b from targetscan.targets	www.mirbase.org...
Null hsa-miR-30c	View Gene Set	0.001388	1080	0.02117	8	microRNA targets for hsa-miR-30c from targetscan.targets	www.mirbase.org...
Null hsa-miR-30d	View Gene Set	0.001388	1080	0.02117	8	microRNA targets for hsa-miR-30d from targetscan.targets	www.mirbase.org...
Null hsa-miR-30e	View Gene Set	0.001388	1080	0.02117	8	microRNA targets for hsa-miR-30e from targetscan.targets	www.mirbase.org...
Null hsa-miR-613	View Gene Set	0.001279	583	0.02117	8	microRNA targets for hsa-miR-613 from targetscan.targets	www.mirbase.org...
Null hsa-miR-9	View Gene Set	0.0007931	936	0.02117	8	microRNA targets for hsa-miR-9 from targetscan.targets	www.mirbase.org...
Null hsa-miR-320a	View Gene Set	0.001776	539	0.02167	17	microRNA targets for hsa-miR-320a from targetscan.targets	www.mirbase.org...
Null hsa-miR-320b	View Gene Set	0.001776	539	0.02167	17	microRNA targets for hsa-miR-320b from targetscan.targets	www.mirbase.org...
Null hsa-miR-320c	View Gene Set	0.001776	539	0.02167	17	microRNA targets for hsa-miR-320c from targetscan.targets	www.mirbase.org...
Null hsa-miR-320d	View Gene Set	0.001776	539	0.02167	17	microRNA targets for hsa-miR-320d from targetscan.targets	www.mirbase.org...
Null hsa-miR-494	View Gene Set	0.00236	360	0.02742	21	microRNA targets for hsa-miR-494 from targetscan.targets	www.mirbase.org...
Null hsa-miR-19a	View Gene Set	0.005033	937	0.04475	22	microRNA targets for hsa-miR-19a from targetscan.targets	www.mirbase.org...
Null hsa-miR-19b	View Gene Set	0.005033	937	0.04475	22	microRNA targets for hsa-miR-19b from targetscan.targets	www.mirbase.org...
Null hsa-miR-29a	View Gene Set	0.005009	850	0.04475	22	microRNA targets for hsa-miR-29a from targetscan.targets	www.mirbase.org...
Null hsa-miR-29b	View Gene Set	0.005009	850	0.04475	22	microRNA targets for hsa-miR-29b from targetscan.targets	www.mirbase.org...
Null hsa-miR-29c	View Gene Set	0.005009	850	0.04475	22	microRNA targets for hsa-miR-29c from targetscan.targets	www.mirbase.org...
Null hsa-miR-340	View Gene Set	0.00443	963	0.04475	22	microRNA targets for hsa-miR-340 from targetscan.targets	www.mirbase.org...
Null hsa-miR-876-5p	View Gene Set	0.005135	148	0.04475	22	microRNA targets for hsa-miR-876-5p from targetscan.targets	www.mirbase.org...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null miranda.pictar.targetscan.targetsIntersection.hsa-miR-26b	View Gene Set	7.644e-06	210	0.0157	1	microRNA targets for miranda.pictar.targetscan.targetsIntersection.hsa-miR-26b from miRNAtargetIntersection	www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-26a	View Gene Set	4.226e-05	211	0.0217	2	microRNA targets for miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-26a from miRNAtargetIntersection	www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-26b	View Gene Set	2.966e-05	215	0.0217	2	microRNA targets for miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-26b from miRNAtargetIntersection	www.mirbase.org...
Null miranda.pictar.targetscan.targetsIntersection.hsa-miR-26a	View Gene Set	3.218e-05	202	0.0217	2	microRNA targets for miranda.pictar.targetscan.targetsIntersection.hsa-miR-26a from miRNAtargetIntersection	www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-205	View Gene Set	9.029e-05	90	0.03709	5	microRNA targets for miranda.mirtarget2.targetscan.targetsIntersection.hsa-miR-205 from miRNAtargetIntersection	www.mirbase.org...

Gene Set Name	GeneSetDescription	Value	Gene Set Size	Corrected Value	Ranking	Description	URL
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-561	View Gene Set	9.784e-14	3650	2.264e-10	1	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-561 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-548d-3p	View Gene Set	3.634e-13	3139	4.204e-10	2	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-548d-3p from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-590-3p	View Gene Set	3.914e-12	2774	3.019e-09	3	microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-590-3p from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-590-3p	View Gene Set	2.778e-11	4554	1.607e-08	4	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-590-3p from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-548c-3p	View Gene Set	3.874e-11	4092	1.793e-08	5	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-548c-3p from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-590-3p	View Gene Set	4.912e-11	4420	1.894e-08	6	microRNA targets for miranda.mirtarget2.targetscan.targetsUnion.hsa-miR-590-3p from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-106a	View Gene Set	1.578e-10	2972	5.118e-08	7	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-106a from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-17	View Gene Set	1.991e-10	3143	5.118e-08	7	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-17 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-200c	View Gene Set	1.845e-10	2410	5.118e-08	7	microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-200c from miRNAtargetUnion	www.mirbase.org...
Null mirbase.tarbase.targetscan.targetsUnion.hsa-miR-124	View Gene Set	2.322e-10	1909	5.373e-08	10	microRNA targets for mirbase.tarbase.targetscan.targetsUnion.hsa-miR-124 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.tarbase.targetsUnion.hsa-miR-200c	View Gene Set	5.266e-10	2316	1.108e-07	11	microRNA targets for miranda.mirbase.tarbase.targetsUnion.hsa-miR-200c from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-124	View Gene Set	6.539e-10	1965	1.261e-07	12	microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-124 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-20a	View Gene Set	9.048e-10	3127	1.537e-07	13	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-20a from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.tarbase.targetsUnion.hsa-miR-106a	View Gene Set	9.297e-10	2750	1.537e-07	13	microRNA targets for miranda.mirbase.tarbase.targetsUnion.hsa-miR-106a from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-200c	View Gene Set	1.077e-09	2480	1.558e-07	15	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-200c from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-590-3p	View Gene Set	1.022e-09	4159	1.558e-07	15	microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-590-3p from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-26a	View Gene Set	1.331e-09	1388	1.711e-07	17	microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-26a from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-26b	View Gene Set	1.315e-09	1361	1.711e-07	17	microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-26b from miRNAtargetUnion	www.mirbase.org...
Null mirtarget2.tarbase.targetscan.targetsUnion.hsa-miR-124	View Gene Set	1.481e-09	1448	1.804e-07	19	microRNA targets for mirtarget2.tarbase.targetscan.targetsUnion.hsa-miR-124 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-20a	View Gene Set	2.481e-09	3072	2.87e-07	20	microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-20a from miRNAtargetUnion	www.mirbase.org...
Null mirbase.tarbase.targetscan.targetsUnion.hsa-miR-26a	View Gene Set	2.825e-09	1269	3.113e-07	21	microRNA targets for mirbase.tarbase.targetscan.targetsUnion.hsa-miR-26a from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-20a	View Gene Set	2.967e-09	2679	3.121e-07	22	microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-20a from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-17	View Gene Set	4.087e-09	3203	4.112e-07	23	microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-17 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.tarbase.targetsUnion.hsa-miR-124	View Gene Set	5.067e-09	1174	4.69e-07	24	microRNA targets for mirbase.mirtarget2.tarbase.targetsUnion.hsa-miR-124 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-26b	View Gene Set	4.972e-09	1418	4.69e-07	24	microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-26b from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-200b	View Gene Set	5.837e-09	2373	5.195e-07	26	microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-200b from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-548a-5p	View Gene Set	6.334e-09	3746	5.328e-07	27	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-548a-5p from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-142-5p	View Gene Set	6.447e-09	2782	5.328e-07	27	microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-142-5p from miRNAtargetUnion	www.mirbase.org...
Null mirbase.pictar.tarbase.targetsUnion.hsa-miR-26a	View Gene Set	6.963e-09	1142	5.556e-07	29	microRNA targets for mirbase.pictar.tarbase.targetsUnion.hsa-miR-26a from miRNAtargetUnion	www.mirbase.org...
Null miranda.pictar.tarbase.targetsUnion.hsa-miR-200c	View Gene Set	7.637e-09	1905	5.89e-07	30	microRNA targets for miranda.pictar.tarbase.targetsUnion.hsa-miR-200c from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-26a	View Gene Set	8.765e-09	1454	6.542e-07	31	microRNA targets for mirbase.mirtarget2.targetscan.targetsUnion.hsa-miR-26a from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-106a	View Gene Set	1.045e-08	3037	7.327e-07	32	microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-106a from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-26b	View Gene Set	1.028e-08	2211	7.327e-07	32	microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-26b from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-124	View Gene Set	1.443e-08	2458	9.541e-07	34	microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-124 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.pictar.targetscan.targetsUnion.hsa-miR-26a	View Gene Set	1.432e-08	1416	9.541e-07	34	microRNA targets for mirbase.pictar.targetscan.targetsUnion.hsa-miR-26a from miRNAtargetUnion	www.mirbase.org...
Null mirbase.pictar.targetscan.targetsUnion.hsa-miR-26b	View Gene Set	1.573e-08	1405	1.011e-06	36	microRNA targets for mirbase.pictar.targetscan.targetsUnion.hsa-miR-26b from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-200b	View Gene Set	2.177e-08	2444	1.332e-06	37	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-200b from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.pictar.targetsUnion.hsa-miR-26b	View Gene Set	2.187e-08	2177	1.332e-06	37	microRNA targets for miranda.mirbase.pictar.targetsUnion.hsa-miR-26b from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.tarbase.targetsUnion.hsa-miR-26a	View Gene Set	2.502e-08	1103	1.484e-06	39	microRNA targets for mirbase.mirtarget2.tarbase.targetsUnion.hsa-miR-26a from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.pictar.targetsUnion.hsa-miR-200c	View Gene Set	2.581e-08	2095	1.493e-06	40	microRNA targets for miranda.mirtarget2.pictar.targetsUnion.hsa-miR-200c from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-26b	View Gene Set	3.098e-08	2088	1.748e-06	41	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-26b from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-548c-5p	View Gene Set	4.163e-08	3706	2.294e-06	42	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-548c-5p from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-548a-3p	View Gene Set	4.309e-08	3211	2.319e-06	43	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-548a-3p from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-20a	View Gene Set	4.455e-08	3205	2.343e-06	44	microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-20a from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-429	View Gene Set	4.704e-08	2506	2.419e-06	45	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-429 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirtarget2.tarbase.targetsUnion.hsa-miR-200c	View Gene Set	5.33e-08	2013	2.681e-06	46	microRNA targets for miranda.mirtarget2.tarbase.targetsUnion.hsa-miR-200c from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-655	View Gene Set	5.947e-08	2490	2.928e-06	47	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-655 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-142-5p	View Gene Set	6.677e-08	2931	3.219e-06	48	microRNA targets for miranda.mirbase.mirtarget2.targetsUnion.hsa-miR-142-5p from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-340	View Gene Set	6.953e-08	3291	3.284e-06	49	microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-340 from miRNAtargetUnion	www.mirbase.org...
Null mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-320	View Gene Set	8.112e-08	1474	3.754e-06	50	microRNA targets for mirbase.mirtarget2.pictar.targetsUnion.hsa-miR-320 from miRNAtargetUnion	www.mirbase.org...
Null miranda.mirbase.targetscan.targetsUnion.hsa-miR-183	View Gene Set	8.629e-08	1885	3.915e-06	51	microRNA targets for miranda.mirbase.targetscan.targetsUnion.hsa-miR-183 from miRNAtargetUnion	www.mirbase.org...

Results

AFA results for: tVPAda2DU

Gene Set Collection: KEGG

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: GO

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: Broad.c2.CGP

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: Broad.c2.CP.BIOCARTA

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: Broad.c2.CP.KEGG

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: Broad.c2.CP.REACTOME

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: Broad.c3.MIR

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: Broad.c3.TFT

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: Broad.c4.CGN

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: Broad.c4.CM

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: Broad.c5.BP

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: Broad.c5.CC

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: Broad.c5.MF

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: PMID

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: ChromosomalTiles5Mb

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: Prosite

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: ppi.BIND

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: ppi.BioGRID

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: ppi.HPRD

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: ppi.anyDB

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: pathwayCommons.cell-map

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: pathwayCommons.nci-nature

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: pathwayCommons.reactome

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: miranda.targets

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: mirbase.targets

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: mirtarget2.targets

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: pictar.targets

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: tarbase.targets

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: targetscan.targets

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: miRNAtargetIntersection

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed

Gene Set Collection: miRNAtargetUnion

Arguments: refPop=all, featureType=featureNames, colname=WilcoxABS, ranks.only=TRUE, absolute=TRUE, alternative=mixed