| 1024 | HSAP00P0000278322 | -0.5462 | 7.264 | -1.729 | 0.1033 | 0.3567 | -5.125 | CDK8 | cyclin-dependent kinase 8 | ENSG00000132964 | 603184 | 1024 | NM_001260 |
| 1025 | HSAP00P0000205016 | -1.565 | 7.228 | -2.435 | 0.02714 | 0.1775 | -3.936 | CDK9 | cyclin-dependent kinase 9 | ENSG00000136807 | 603251 | 1025 | NM_001261 |
| 1050 | HSAP00P0000378575 | -1.459 | 8.507 | -4.418 | 0.0004441 | 0.01424 | 0.0001751 | CEBPA | CCAAT/enhancer binding protein (C/EBP), alpha | ENSG00000245848 | 116897, 601626 | 1050 | Y11525 |
| 1051 | HSAP00P0000402400 | -3.093 | 8.372 | -7.112 | 2.658e-06 | 0.0005961 | 4.981 | CEBPB | CCAAT/enhancer binding protein (C/EBP), beta | ENSG00000172216 | 189965 | 1051 | BC005132 |
| 1385 | HSAP00P0000067676 | -1.805 | 7.577 | -3.704 | 0.001966 | 0.03698 | -1.446 | CREB1 | cAMP responsive element binding protein 1 | ENSG00000118260 | 123810, 612160 | 1385 | NM_134442 |
| 1387 | HSAP00P0000316836 | 0.4755 | 9.704 | 2.114 | 0.05076 | 0.2484 | -4.504 | CREBBP | CREB binding protein | ENSG00000005339 | 180849, 600140 | 1387 | NM_004380 |
| 1788 | HSAP00P0000047090 | -1.99 | 7.411 | -6.733 | 5.15e-06 | 0.0008713 | 4.343 | DNMT3A | DNA (cytosine-5-)-methyltransferase 3 alpha | ENSG00000119772 | 602769 | 1788 | AF331856 |
| 2033 | HSAP00P0000417540 | -0.5073 | 8.841 | -1.538 | 0.1438 | 0.4187 | -5.403 | EP300 | E1A binding protein p300 | ENSG00000100393 | 114500, 180849, 602700, 613684 | 2033 | U01877 |
| 2099 | HSAP00P0000153442 | 1.277 | 5.488 | 3.79 | 0.00164 | 0.03307 | -1.27 | ESR1 | estrogen receptor 1 | ENSG00000091831 | 133430, 157300, 608446 | 2099 | AF120105 |
| 2309 | HSAP00P0000149078 | -0.7077 | 9.009 | -2.654 | 0.01745 | 0.1385 | -3.527 | FOXO3 | forkhead box O3 | ENSG00000118689 | 602681 | 2309 | NM_001455 |
| 2648 | HSAP00P0000345843 | -2.281 | 8.354 | -8.258 | 4.031e-07 | 0.0001899 | 6.783 | KAT2A | K(lysine) acetyltransferase 2A | ENSG00000257344, ENSG00000108773 | 602301 | 2648 | NM_021078 |
| 274 | HSAP00P0000059391 | -1.549 | 8.375 | -4.214 | 0.0006772 | 0.01863 | -0.4111 | BIN1 | bridging integrator 1 | ENSG00000136717 | 255200, 601248 | 274 | NM_139343 |
| 2931 | HSAP00P0000383236 | -1.306 | 9.385 | -3.688 | 0.002033 | 0.03776 | -1.478 | GSK3A | glycogen synthase kinase 3 alpha | ENSG00000105723 | 606784 | 2931 | BC027984 |
| 2932 | HSAP00P0000087491 | -0.9654 | 5.762 | -2.223 | 0.04119 | 0.2228 | -4.317 | GSK3B | glycogen synthase kinase 3 beta | ENSG00000082701 | 605004 | 2932 | BC012760 |
| 2956 | HSAP00P0000050648 | -2.025 | 6.493 | -3.944 | 0.001188 | 0.02682 | -0.9577 | MSH6 | mutS homolog 6 (E. coli) | ENSG00000116062 | 276300, 600678, 604370, 608089 | 2956 | Y16676 |
| 2959 | HSAP00P0000018927 | -0.8911 | 7.133 | -1.58 | 0.1339 | 0.4046 | -5.344 | GTF2B | general transcription factor IIB | ENSG00000137947 | 189963 | 2959 | NM_001514 |
| 2962 | HSAP00P0000369427 | 1.089 | 9.582 | 3.041 | 0.007869 | 0.0866 | -2.777 | GTF2F1 | general transcription factor IIF, polypeptide 1, 74kDa | ENSG00000125651 | 189968 | 2962 | NM_002096 |
| 2969 | HSAP00P0000164089 | -3.528 | 9.381 | -7.276 | 2.007e-06 | 0.0005023 | 5.251 | GTF2I | general transcription factor IIi | ENSG00000077809 | 194050, 601679 | 2969 | NM_032999 |
| 3065 | HSAP00P0000010163 | -1.212 | 10.6 | -3.593 | 0.002477 | 0.04269 | -1.669 | HDAC1 | histone deacetylase 1 | ENSG00000116478 | 601241 | 3065 | NM_004964 |
| 3091 | HSAP00P0000290665 | -1.393 | 8.207 | -4.52 | 0.0003601 | 0.01246 | 0.2047 | HIF1A | hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) | ENSG00000100644 | 603348 | 3091 | NM_001530 |
| 3183 | HSAP00P0000285402 | -2.113 | 9.918 | -7.53 | 1.31e-06 | 0.00039 | 5.66 | HNRNPC | heterogeneous nuclear ribonucleoprotein C (C1/C2) | ENSG00000092199 | 164020 | 3183 | NM_031314 |
| 3192 | HSAP00P0000043775 | -2.628 | 7.926 | -7.442 | 1.515e-06 | 0.0004225 | 5.521 | HNRNPU | heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) | ENSG00000153187 | 602869 | 3192 | BC015782 |
| 3320 | HSAP00P0000297272 | -1.66 | 11.11 | -4.185 | 0.0007195 | 0.01938 | -0.47 | HSP90AA1 | heat shock protein 90kDa alpha (cytosolic), class A member 1 | ENSG00000080824 | 140571 | 3320 | BC023006 |
| 4087 | HSAP00P0000362452 | -0.8847 | 8.103 | -2.759 | 0.0141 | 0.1225 | -3.327 | SMAD2 | SMAD family member 2 | ENSG00000175387 | 601366 | 4087 | AY134745 |
| 4088 | HSAP00P0000307165 | 0.9039 | 6.458 | 2.759 | 0.01411 | 0.1225 | -3.328 | SMAD3 | SMAD family member 3 | ENSG00000166949 | 603109, 613795 | 4088 | AF151027 |
| 4149 | HSAP00P0000291277 | -0.9182 | 5.641 | -2.511 | 0.02333 | 0.1631 | -3.796 | MAX | MYC associated factor X | ENSG00000125952 | 154950, 171300 | 4149 | BC036092 |
| 4176 | HSAP00P0000167546 | -2.295 | 9.773 | -7.815 | 8.184e-07 | 0.0002904 | 6.11 | MCM7 | minichromosome maintenance complex component 7 | ENSG00000166508 | 600592 | 4176 | AY007130 |
| 4221 | HSAP00P0000241172 | -0.9902 | 6.423 | -2.414 | 0.02832 | 0.1817 | -3.975 | MEN1 | multiple endocrine neoplasia I | ENSG00000133895 | 131100, 145000, 613733 | 4221 | BC002664 |
| 4289 | HSAP00P0000172093 | -1.966 | 6.578 | -4.622 | 0.0002924 | 0.01091 | 0.4079 | MKLN1 | muskelin 1, intracellular mediator containing kelch motifs | ENSG00000128585 | 605623 | 4289 | AK002024 |
| 4292 | HSAP00P0000076926 | -1.209 | 9.385 | -4.02 | 0.001013 | 0.02419 | -0.8028 | MLH1 | mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) | ENSG00000076242 | 114030, 120436, 158320, 276300, 609310 | 4292 | NM_000249 |
| 4335 | HSAP00P0000333983 | -1.49 | 7.257 | -3.191 | 0.005759 | 0.07177 | -2.479 | MNT | MAX binding protein | ENSG00000070444 | 603039 | 4335 | BC033186 |
| 4430 | HSAP00P0000065914 | -1.217 | 7.178 | -3.696 | 0.001997 | 0.03738 | -1.461 | MYO1B | myosin IB | ENSG00000128641 | 606537 | 4430 | AJ001381 |
| 4436 | HSAP00P0000050597 | 0.9316 | 3.551 | 2.455 | 0.02608 | 0.1736 | -3.899 | MSH2 | mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli) | ENSG00000095002 | 114030, 120435, 137800, 158320, 162200, 276300, 609309 | 4436 | NM_000251 |
| 4609 | HSAP00P0000187956 | -4.045 | 10.73 | -14.76 | 1.181e-10 | 2.478e-06 | 14.02 | MYC | v-myc myelocytomatosis viral oncogene homolog (avian) | ENSG00000136997 | 113970, 190080 | 4609 | X66258 |
| 596 | HSAP00P0000363748 | 0.8055 | 5.464 | 2.672 | 0.01686 | 0.1357 | -3.494 | BCL2 | B-cell CLL/lymphoma 2 | ENSG00000171791 | 151430 | 596 | NM_000633 |
| 60 | HSAP00P0000157203 | -1.547 | 12.79 | -6.154 | 1.472e-05 | 0.00165 | 3.325 | ACTB | actin, beta | ENSG00000075624 | 102630, 607371 | 60 | NM_001101 |
| 672 | HSAP00P0000346604 | -0.8625 | 7.493 | -2.238 | 0.04001 | 0.2194 | -4.29 | BRCA1 | breast cancer 1, early onset | ENSG00000012048 | 113705, 114480, 604370 | 672 | AF005068 |
| 86 | HSAP00P0000094691 | -1.88 | 8.328 | -3.406 | 0.003671 | 0.05445 | -2.048 | ACTL6A | actin-like 6A | ENSG00000136518 | 604958 | 86 | NM_178042 |
| 902 | HSAP00P0000121278 | -1.895 | 9.822 | -5.121 | 0.0001068 | 0.005784 | 1.392 | CCNH | cyclin H | ENSG00000134480 | 601953 | 902 | NM_001239 |
| 904 | HSAP00P0000261444 | 1.029 | 5.745 | 3.326 | 0.004345 | 0.06035 | -2.21 | CCNT1 | cyclin T1 | ENSG00000129315 | 143055 | 904 | NM_001240 |
| 923 | HSAP00P0000238786 | 1.074 | 7.219 | 3.575 | 0.002574 | 0.04371 | -1.706 | CD6 | CD6 molecule | ENSG00000013725 | 186720 | 923 | NM_006725 |
| 990 | HSAP00P0000344484 | -2.003 | 7.674 | -5.147 | 0.0001016 | 0.005602 | 1.441 | CDC6 | cell division cycle 6 homolog (S. cerevisiae) | ENSG00000094804 | 602627, 613805 | 990 | NM_001254 |